ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart58h02 |
|---|---|
| Clone Library Name | barley_pub |
>FILA_MOUSE (P11088) Filaggrin (Fragment)| Length = 336 Score = 32.7 bits (73), Expect = 0.22 Identities = 20/59 (33%), Positives = 25/59 (42%) Frame = -2 Query: 320 AGAEHDEHGGRDSPGHHGPXXXXXAVDGEQREASSGRAEEQHEHQRCLGGQQREHQLDH 144 AG H++ R S G HG E+ S + QHE QR G Q +HQ H Sbjct: 134 AGQRHEQ---RSSRGQHGSGYYYEQEHSEEESDSQHQHGHQHEQQR---GHQHQHQHQH 186
>PTN23_RAT (O88902) Tyrosine-protein phosphatase non-receptor type 23 (EC| 3.1.3.48) (His-domain-containing protein tyrosine phosphatase) (HD-PTP) (Protein tyrosine phosphatase TD14) (PTP-TD14) (Fragment) Length = 1499 Score = 31.6 bits (70), Expect = 0.49 Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 3/98 (3%) Frame = -2 Query: 350 AAPDLGDAIPAGAEHDEHGGRDSPGHHGPXXXXXAVDGEQREASSGR---AEEQHEHQRC 180 AA DL + P +HGG PG P VD +R + ++ +EH Sbjct: 978 AAADLLSSSP----ESQHGGTQPPGGGQPLLQPTKVDAAERPTAQALRLIEQDPYEHPER 1033 Query: 179 LGGQQREHQLDHGRXVGASNRWXAAWRGGESGGEGDSQ 66 L Q+E + G+ +G + A WR + E D++ Sbjct: 1034 LQKLQQELESFRGQ-LGDAGALDAVWRELQEAQEHDAR 1070
>ZBTB9_MOUSE (Q8CDC7) Zinc finger and BTB domain-containing protein 9| Length = 459 Score = 30.8 bits (68), Expect = 0.83 Identities = 23/89 (25%), Positives = 31/89 (34%) Frame = -2 Query: 329 AIPAGAEHDEHGGRDSPGHHGPXXXXXAVDGEQREASSGRAEEQHEHQRCLGGQQREHQL 150 A+P+ DE D P V+ E E A E + L G+ E + Sbjct: 249 ALPSKPSEDESSTVDPPAPPVQASQILYVNQENVECKEEIARGTKEKTKVLSGEDSEEK- 307 Query: 149 DHGRXVGASNRWXAAWRGGESGGEGDSQW 63 R+ + GGES G GD W Sbjct: 308 -------EELRYLLSSGGGESSGAGDPSW 329
>TRMU_RHOBA (Q7TTZ4) Probable tRNA| (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) Length = 399 Score = 30.4 bits (67), Expect = 1.1 Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 5/71 (7%) Frame = -2 Query: 341 DLGDAIPAGAEHDEHGGRDSPGH-----HGPXXXXXAVDGEQREASSGRAEEQHEHQRCL 177 +L DA G + + G+ PGH P D Q + G+A ++ +R L Sbjct: 321 ELADAQSVGIQI-RYNGQPHPGHVVMDGSDPTRMKVMFDDPQAAVAPGQAAVVYDGERVL 379 Query: 176 GGQQREHQLDH 144 GG H +DH Sbjct: 380 GGGWITHAIDH 390
>SAFB2_HUMAN (Q14151) Scaffold attachment factor B2| Length = 953 Score = 30.0 bits (66), Expect = 1.4 Identities = 28/96 (29%), Positives = 35/96 (36%), Gaps = 18/96 (18%) Frame = -2 Query: 302 EHGGRDSPGHHGPXXXXXAVD-------GEQREASSGRA--------EEQHEHQRCLGGQ 168 +H G D GH GP G + S GR + EH + L Sbjct: 798 QHYGDDRHGHGGPPERHGRDSRDGWGGYGSDKRLSEGRGLPPPPRGGRDWGEHNQRL--- 854 Query: 167 QREHQL---DHGRXVGASNRWXAAWRGGESGGEGDS 69 EHQ GA++R A W+GGE G G S Sbjct: 855 -EEHQARAWQGAMDAGAASREHARWQGGERGLSGPS 889
>POL_SIVSP (P19505) Pol polyprotein [Contains: Protease (Retropepsin) (EC| 3.4.23.-); Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4) (RT); Integrase (IN)] Length = 1022 Score = 30.0 bits (66), Expect = 1.4 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Frame = -2 Query: 293 GRDSPGH-HGPXXXXXAVDGEQREASSGRAEEQHEHQRCLGGQQRE 159 G+++P HGP + R +S G EE HE + G+QRE Sbjct: 15 GKEAPQFPHGPDASGADTNCSPRGSSCGSTEELHEDGQKAEGEQRE 60
>POL_SIVS4 (P12502) Pol polyprotein [Contains: Protease (Retropepsin) (EC| 3.4.23.-); Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4) (RT); Integrase (IN)] Length = 1019 Score = 30.0 bits (66), Expect = 1.4 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Frame = -2 Query: 293 GRDSPGH-HGPXXXXXAVDGEQREASSGRAEEQHEHQRCLGGQQRE 159 G+++P HGP + R +S G EE HE + G+QRE Sbjct: 12 GKEAPQFPHGPDASGADTNCSPRGSSCGSTEELHEDGQKAEGEQRE 57
>DEAD_KLEPN (P33906) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 642 Score = 29.6 bits (65), Expect = 1.9 Identities = 19/57 (33%), Positives = 26/57 (45%) Frame = -2 Query: 239 GEQREASSGRAEEQHEHQRCLGGQQREHQLDHGRXVGASNRWXAAWRGGESGGEGDS 69 GE+RE G E+ E R GG++RE GR R+ R G + G D+ Sbjct: 574 GERREGGRGFGGERREGGRGFGGERREGGRGEGR------RFSGERREGRAPGRDDA 624
>LEA13_GOSHI (P09441) Late embryogenesis abundant protein D-113 (LEA D-113)| Length = 165 Score = 29.3 bits (64), Expect = 2.4 Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 4/78 (5%) Frame = -2 Query: 242 DGEQREASSGRAEEQHEHQRCLGGQQREHQLDHGRX----VGASNRWXAAWRGGESGGEG 75 D ++E + R EE+ E + R H G +G + A + G++GG G Sbjct: 33 DPNEKEMARERKEERQEDAELRKQEARHHNATAGHVGGGGIGGTGYTTAGYNIGDTGGYG 92 Query: 74 DSQWAISRKMGKLGSGKD 21 + +R GSG D Sbjct: 93 GTGGHDNRGYPTAGSGYD 110
>PTN23_HUMAN (Q9H3S7) Tyrosine-protein phosphatase non-receptor type 23 (EC| 3.1.3.48) (His-domain-containing protein tyrosine phosphatase) (HD-PTP) (Protein tyrosine phosphatase TD14) (PTP-TD14) Length = 1636 Score = 29.3 bits (64), Expect = 2.4 Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 3/98 (3%) Frame = -2 Query: 350 AAPDLGDAIPAGAEHDEHGGRDSPGHHGPXXXXXAVD---GEQREASSGRAEEQHEHQRC 180 AA DL + P +HGG SPG P VD G + +A + +EH Sbjct: 1115 AAADLLSSSP----ESQHGGTQSPGGGQPLLQPTKVDAAEGRRPQALRLIERDPYEHPER 1170 Query: 179 LGGQQREHQLDHGRXVGASNRWXAAWRGGESGGEGDSQ 66 L Q+E + G+ +G WR + E D++ Sbjct: 1171 LRQLQQELEAFRGQ-LGDVGALDTVWRELQDAQEHDAR 1207
>EYA_DROME (Q05201) Developmental protein eyes absent (EC 3.1.3.48) (Protein| Clift) Length = 766 Score = 29.3 bits (64), Expect = 2.4 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 3/47 (6%) Frame = -2 Query: 206 EEQHEHQRCLGGQQREHQLDHGRXVGASNRWXAAWRG---GESGGEG 75 ++Q HQ+ QQ+ HQ H V ASN +A G G GG G Sbjct: 54 QQQQTHQQQQQQQQQSHQQSHSSTVLASNGPSSAGAGMGVGVGGGGG 100
>VG48_SHV21 (Q01033) Hypothetical gene 48 protein| Length = 797 Score = 28.9 bits (63), Expect = 3.2 Identities = 25/104 (24%), Positives = 39/104 (37%) Frame = -2 Query: 377 GRELGELAFAAPDLGDAIPAGAEHDEHGGRDSPGHHGPXXXXXAVDGEQREASSGRAEEQ 198 G++ G+ D GD G E DE G D G +G++ E E++ Sbjct: 506 GKDEGDEGDEGKDEGDEGDEGDEGDE--GEDEWEDEGDEGED---EGDEGEDEGDEGEDE 560 Query: 197 HEHQRCLGGQQREHQLDHGRXVGASNRWXAAWRGGESGGEGDSQ 66 E + G + E + D G G G + G EG+ + Sbjct: 561 GEDEGDEGEDEGEDEGDEGEDEGEDEGDEGEDEGEDEGDEGEDE 604
>YP62_CAEEL (Q09437) Putative serine/threonine-protein kinase B0495.2 (EC| 2.7.11.1) Length = 719 Score = 28.5 bits (62), Expect = 4.1 Identities = 19/60 (31%), Positives = 28/60 (46%) Frame = -2 Query: 269 GPXXXXXAVDGEQREASSGRAEEQHEHQRCLGGQQREHQLDHGRXVGASNRWXAAWRGGE 90 GP D + R+ SGR ++ HEH+ R+H+ D G SNR ++ R E Sbjct: 106 GPDARQKDRDFKGRQERSGRDQKVHEHRH--HHHHRKHETD-GHRTNRSNRDRSSERDSE 162
>FILA_HUMAN (P20930) Filaggrin| Length = 4061 Score = 28.5 bits (62), Expect = 4.1 Identities = 22/84 (26%), Positives = 30/84 (35%), Gaps = 1/84 (1%) Frame = -2 Query: 317 GAEHDEHGGRDSPGH-HGPXXXXXAVDGEQREASSGRAEEQHEHQRCLGGQQREHQLDHG 141 G+ H D GH H + + +SSG+A HE R G++ H H Sbjct: 656 GSRHPRSHHEDRAGHGHSADSSRKSGTRHTQNSSSGQAASSHEQARSSAGER--HGSRHQ 713 Query: 140 RXVGASNRWXAAWRGGESGGEGDS 69 S+R G S DS Sbjct: 714 LQSADSSRHSGTGHGQASSAVRDS 737
>PP1RA_RAT (O55000) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (Phosphatase 1 nuclear targeting subunit) (PNUTS protein) (MHC class I region proline-rich protein CAT53) Length = 872 Score = 28.5 bits (62), Expect = 4.1 Identities = 21/72 (29%), Positives = 24/72 (33%), Gaps = 3/72 (4%) Frame = -2 Query: 323 PAGAEHDEHGGRDSPGHHGPXXXXXAVDGEQREASSGRAEEQHEHQ---RCLGGQQREHQ 153 P G+ H + PGH GP D R HEH+ GG R H Sbjct: 771 PGGSMGSGHRSHEGPGHGGPHGHRPH-DVPSHRGHDHRGPPPHEHRGHDGHGGGGHRGHD 829 Query: 152 LDHGRXVGASNR 117 H SNR Sbjct: 830 GGHSHGGDMSNR 841
>CRYD_NEUCR (Q7SI68) Putative crytochrome DASH, mitochondrial precursor| Length = 745 Score = 28.1 bits (61), Expect = 5.4 Identities = 25/106 (23%), Positives = 33/106 (31%), Gaps = 7/106 (6%) Frame = -2 Query: 320 AGAEHDEHGGRDSPGHHGPXXXXXAVDGEQREASSGRAEEQ-------HEHQRCLGGQQR 162 +G D GG + P +Q SGR++ H HQ Sbjct: 605 SGGSPDGSGGGNIPSESNCAAAGSG-QAQQTHQGSGRSQSSSNHGGRSHSHQHNQQNYHH 663 Query: 161 EHQLDHGRXVGASNRWXAAWRGGESGGEGDSQWAISRKMGKLGSGK 24 H+ + G R RGG GG SQ G G G+ Sbjct: 664 SHRGNDYTRGGGGGRGGRGGRGGGGGGYSASQGYYGIGGGYRGGGR 709
>AKA12_HUMAN (Q02952) A-kinase anchor protein 12 (A-kinase anchor protein 250| kDa) (AKAP 250) (Myasthenia gravis autoantigen gravin) Length = 1781 Score = 28.1 bits (61), Expect = 5.4 Identities = 25/85 (29%), Positives = 33/85 (38%), Gaps = 1/85 (1%) Frame = -2 Query: 296 GGRDSPGHHGPXXXXX-AVDGEQREASSGRAEEQHEHQRCLGGQQREHQLDHGRXVGASN 120 GG + G H EQ+ SS + E+ E CL E Q D GA++ Sbjct: 538 GGDEESGEHTQVPADSPDSQEEQKGESSASSPEEPEEITCLEKGLAEVQQDGEAEEGATS 597 Query: 119 RWXAAWRGGESGGEGDSQWAISRKM 45 GE EG + WA +KM Sbjct: 598 -------DGEKKREGVTPWASFKKM 615
>EN16_STRPU (P13665) Protein ENDO16 (Fragment)| Length = 265 Score = 27.7 bits (60), Expect = 7.0 Identities = 15/45 (33%), Positives = 19/45 (42%) Frame = -2 Query: 287 DSPGHHGPXXXXXAVDGEQREASSGRAEEQHEHQRCLGGQQREHQ 153 +S G +GE E + G AEE HE GG Q E + Sbjct: 100 ESQGQESERSESEGSEGEDSEETEG-AEEPHEQMESEGGDQEESE 143
>CD2L5_HUMAN (Q14004) Cell division cycle 2-like protein kinase 5 (EC 2.7.11.22)| (CDC2-related protein kinase 5) (Cholinesterase-related cell division controller) Length = 1512 Score = 27.7 bits (60), Expect = 7.0 Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 2/73 (2%) Frame = -2 Query: 230 REASSGRAEEQHEHQRCLGGQQ--REHQLDHGRXVGASNRWXAAWRGGESGGEGDSQWAI 57 R +SSGR++E+H R GQ+ E R + + G S G + + Sbjct: 202 RRSSSGRSKERHREHRRRDGQRGGSEASKSRSRHSHSGEERAEVAKSGSSSSSGGRRKSA 261 Query: 56 SRKMGKLGSGKDQ 18 S S KD+ Sbjct: 262 SATSSSSSSRKDR 274
>YDJ7_SCHPO (P87055) Hypothetical protein C57A10.07 in chromosome I| Length = 311 Score = 27.7 bits (60), Expect = 7.0 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = -2 Query: 110 AAWRGGESGGEGDSQWAI 57 A W GG + GE DS+W + Sbjct: 86 AVWLGGSTNGEDDSEWIL 103
>YQJI_SHIFL (P64589) Hypothetical protein yqjI| Length = 207 Score = 27.7 bits (60), Expect = 7.0 Identities = 17/54 (31%), Positives = 21/54 (38%) Frame = -2 Query: 275 HHGPXXXXXAVDGEQREASSGRAEEQHEHQRCLGGQQREHQLDHGRXVGASNRW 114 H G GE+ E QHEH +C GG+ HGR G R+ Sbjct: 11 HEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGR-------HGRGGGRRQRF 57
>YQJI_ECOLI (P64588) Hypothetical protein yqjI| Length = 207 Score = 27.7 bits (60), Expect = 7.0 Identities = 17/54 (31%), Positives = 21/54 (38%) Frame = -2 Query: 275 HHGPXXXXXAVDGEQREASSGRAEEQHEHQRCLGGQQREHQLDHGRXVGASNRW 114 H G GE+ E QHEH +C GG+ HGR G R+ Sbjct: 11 HEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGR-------HGRGGGRRQRF 57
>VCO7_ADECU (P68965) Major core protein precursor (Protein VII) (pVII)| Length = 132 Score = 27.3 bits (59), Expect = 9.2 Identities = 15/49 (30%), Positives = 22/49 (44%) Frame = -3 Query: 367 WANSPSRRRIXAMLYPLEPSTTSMVAATVRAITGPRPRLLQSTASSARR 221 W + RR A PL+P T + V AT+ + P + +ARR Sbjct: 43 WGSKGRRRPGRARGVPLDPKTEAEVVATIDEVARNGPPAARLVLEAARR 91
>VCO7_ADECR (P68964) Major core protein precursor (Protein VII) (pVII)| Length = 132 Score = 27.3 bits (59), Expect = 9.2 Identities = 15/49 (30%), Positives = 22/49 (44%) Frame = -3 Query: 367 WANSPSRRRIXAMLYPLEPSTTSMVAATVRAITGPRPRLLQSTASSARR 221 W + RR A PL+P T + V AT+ + P + +ARR Sbjct: 43 WGSKGRRRPGRARGVPLDPKTEAEVVATIDEVARNGPPAARLVLEAARR 91
>SCAR2_ARATH (Q5XPJ9) Protein SCAR2 (AtSCAR2) (Protein WAVE4) (Protein DISTORTED3)| (Protein IRREGULAR TRICHOME BRANCH1) Length = 1399 Score = 27.3 bits (59), Expect = 9.2 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = +1 Query: 31 DPSFPIFLEIAHWLSPSPPDSPP 99 DP+FP F I + P+P D PP Sbjct: 1039 DPTFPSFGFIPETIPPNPEDMPP 1061
>PF12_PIG (P51525) Prophenin-2 precursor (PF-2) (PR-2) (C12)| (Prophenin-1-like) Length = 228 Score = 27.3 bits (59), Expect = 9.2 Identities = 11/26 (42%), Positives = 13/26 (50%) Frame = +1 Query: 22 SFPDPSFPIFLEIAHWLSPSPPDSPP 99 +FP P FP + W P PP PP Sbjct: 192 NFPGPPFPPPIFPGPWFPPPPPFRPP 217
>TRPM6_MOUSE (Q8CIR4) Transient receptor potential cation channel subfamily M| member 6 (EC 2.7.11.1) (Channel kinase 2) (Melastatin-related TRP cation channel 6) Length = 2028 Score = 27.3 bits (59), Expect = 9.2 Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 3/48 (6%) Frame = -2 Query: 185 RCLGGQQREHQLDH---GRXVGASNRWXAAWRGGESGGEGDSQWAISR 51 RC G Q H L GR + + AW + G GD QW++ + Sbjct: 29 RCTPGCQICHNLVRCYCGRLIEEHHGLDRAWNLSVTEGHGDEQWSVEK 76
>GRP2_PHAVU (P10496) Glycine-rich cell wall structural protein 1.8 precursor| (GRP 1.8) Length = 465 Score = 27.3 bits (59), Expect = 9.2 Identities = 25/91 (27%), Positives = 30/91 (32%) Frame = -2 Query: 296 GGRDSPGHHGPXXXXXAVDGEQREASSGRAEEQHEHQRCLGGQQREHQLDHGRXVGASNR 117 GG + G HG G Q + G EH GG Q G GA Sbjct: 263 GGYGAGGEHG-----GGAGGGQGGGAGGGYGAGGEHGGGAGGGQGGGA---GGGYGAGGE 314 Query: 116 WXAAWRGGESGGEGDSQWAISRKMGKLGSGK 24 GG+ GG G A+ G G G+ Sbjct: 315 HGGGGGGGQGGGAGGGYAAVGEHGGGYGGGQ 345
>HYR1_CANAL (P46591) Hyphally-regulated protein precursor| Length = 937 Score = 27.3 bits (59), Expect = 9.2 Identities = 21/92 (22%), Positives = 32/92 (34%), Gaps = 2/92 (2%) Frame = -2 Query: 296 GGRDSPGHHGPXXXXXAVDGEQREASSGRAEEQHEHQRCLGGQQREHQLDHGRXVGASNR 117 GG +S +HGP G A S + + G + G G++N Sbjct: 583 GGNESGSNHGPGNGSTEGSGNGSGAGSNEGSQSGPNNGSGSGSEGGSNNGSGSDSGSNNG 642 Query: 116 WXAAWRGGESGG--EGDSQWAISRKMGKLGSG 27 + G G EG + S + + GSG Sbjct: 643 SGSGSNNGSGSGSTEGSEGGSGSNEGSQSGSG 674
>ICP0_BHV1J (P29128) Trans-acting transcriptional protein ICP0 (P135 protein)| (IER 2.9/ER2.6) Length = 676 Score = 27.3 bits (59), Expect = 9.2 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = -3 Query: 124 QTGGXRLGAEESREEKGTASGRSQGKWG 41 + GG GAEE+ E +G +GR+ G G Sbjct: 123 EAGGGAGGAEEAGEARGAGAGRAAGAAG 150
>RRB1_YEAST (Q04225) Ribosome assembly protein RRB1| Length = 511 Score = 27.3 bits (59), Expect = 9.2 Identities = 11/23 (47%), Positives = 13/23 (56%) Frame = -3 Query: 70 ASGRSQGKWGNWDLERTSRPKAD 2 ASG G WG WDL + + AD Sbjct: 383 ASGDDNGTWGVWDLRQFTPSNAD 405
>PF11_PIG (P51524) Prophenin-1 precursor (PF-1) (C6) (Fragment)| Length = 212 Score = 27.3 bits (59), Expect = 9.2 Identities = 11/26 (42%), Positives = 13/26 (50%) Frame = +1 Query: 22 SFPDPSFPIFLEIAHWLSPSPPDSPP 99 +FP P FP + W P PP PP Sbjct: 176 NFPGPPFPPPIFPGPWFPPPPPFRPP 201
>PHLB1_MOUSE (Q6PDH0) Pleckstrin homology-like domain family B member 1 (Protein| LL5-alpha) Length = 1371 Score = 27.3 bits (59), Expect = 9.2 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%) Frame = -3 Query: 349 RRRIXAM--LYPLEPSTTSMVAATVRAITGPRPRLLQSTASSARRR 218 RR + +M L PL PS + + + A T P P+L + A S R R Sbjct: 450 RRGLDSMRELPPLSPSLSRRALSPLPARTAPDPKLSREVAESPRPR 495
>DVL2_MOUSE (Q60838) Segment polarity protein dishevelled homolog DVL-2| (Dishevelled-2) (DSH homolog 2) Length = 736 Score = 27.3 bits (59), Expect = 9.2 Identities = 20/75 (26%), Positives = 28/75 (37%) Frame = -2 Query: 296 GGRDSPGHHGPXXXXXAVDGEQREASSGRAEEQHEHQRCLGGQQREHQLDHGRXVGASNR 117 GG S H + + +GR EE+ + G + E S+R Sbjct: 578 GGSASSQHSEGSRSSGSTRSDGGAGRTGRPEERAPESKSGSGSESE----------LSSR 627 Query: 116 WXAAWRGGESGGEGD 72 + RGGE GG GD Sbjct: 628 GGSLRRGGEPGGTGD 642
>DSCR6_HUMAN (P57055) Down syndrome critical region protein 6| Length = 190 Score = 27.3 bits (59), Expect = 9.2 Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 6/79 (7%) Frame = -2 Query: 242 DGEQREASSGRAEEQ------HEHQRCLGGQQREHQLDHGRXVGASNRWXAAWRGGESGG 81 D E E++S E + H + +GG+Q GR G N+ + GG+ G Sbjct: 113 DDESTESASEAEEPEEGPPPLHLLPQEVGGRQENGPGGKGRDQGI-NQGQRSSGGGDHWG 171 Query: 80 EGDSQWAISRKMGKLGSGK 24 EG +S + GK S K Sbjct: 172 EGPLPQGVSSRGGKCSSSK 190 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,475,055 Number of Sequences: 219361 Number of extensions: 742268 Number of successful extensions: 2956 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 2792 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2940 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 1402043640 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
