ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart58g05 |
|---|---|
| Clone Library Name | barley_pub |
>tpe|BN000093.1|HVA000093 TPA: TPA_exp: Hordeum vulgare mRNA for putative cysteine proteinase precursor (sf42 gene) Length = 1438 Score = 694 bits (350), Expect = 0.0 Identities = 350/350 (100%) Strand = Plus / Plus Query: 93 ccggcgccggcgacggcggccgcgggggacgaggagcccctgatccggcaggtcgtgggc 152 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 81 ccggcgccggcgacggcggccgcgggggacgaggagcccctgatccggcaggtcgtgggc 140 Query: 153 ggcgccgaccccctcgacaacgacctggagctcgactcgcagttcgtcggcttcgtgcag 212 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141 ggcgccgaccccctcgacaacgacctggagctcgactcgcagttcgtcggcttcgtgcag 200 Query: 213 cggttcgggaagacgtaccgggacgcggaggagcacgcgcaccggctctccgtgttcaag 272 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 201 cggttcgggaagacgtaccgggacgcggaggagcacgcgcaccggctctccgtgttcaag 260 Query: 273 gccaacctccgccgcgcgcgccggcaccagctgctcgacccgtccgccgagcacggggtc 332 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 261 gccaacctccgccgcgcgcgccggcaccagctgctcgacccgtccgccgagcacggggtc 320 Query: 333 accaagttctccgacctcaccccggccgagttccgccggacctacctggggctcaagacg 392 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 321 accaagttctccgacctcaccccggccgagttccgccggacctacctggggctcaagacg 380 Query: 393 acccggcgatccttcctgcgggagatggccgggtcggcgcacgacgcgcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381 acccggcgatccttcctgcgggagatggccgggtcggcgcacgacgcgcc 430 Score = 73.8 bits (37), Expect = 4e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 13 aagaagcaaccaagaaaatccccccaatggatcatcg 49 ||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagaagcaaccaagaaaatccccccaatggatcatcg 37
>gb|AY841792.1| Triticum aestivum cysteine protease (CP) mRNA, complete cds Length = 1525 Score = 591 bits (298), Expect = e-166 Identities = 337/350 (96%) Strand = Plus / Plus Query: 93 ccggcgccggcgacggcggccgcgggggacgaggagcccctgatccggcaggtcgtgggc 152 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 148 ccggcgccggcagcggcggccgcgggggacgaggagcccctgatccggcaggtcgtcggc 207 Query: 153 ggcgccgaccccctcgacaacgacctggagctcgactcgcagttcgtcggcttcgtgcag 212 |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct: 208 ggcgccgaccccctcgacaacgacctggagctcgactcgcagctcctcggcttcgtgcag 267 Query: 213 cggttcgggaagacgtaccgggacgcggaggagcacgcgcaccggctctccgtgttcaag 272 |||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||| Sbjct: 268 cggttcgggaagacctacagggacgcggaggagcacgcgcaccggctctccgtcttcaag 327 Query: 273 gccaacctccgccgcgcgcgccggcaccagctgctcgacccgtccgccgagcacggggtc 332 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 328 gccaacctccgccgcgcgcgccggcaccagatgctcgacccgtccgccgagcacggggtc 387 Query: 333 accaagttctccgacctcaccccggccgagttccgccggacctacctggggctcaagacg 392 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 388 accaagttctccgacctcaccccggccgagttccgccggaccttcctggggctcaagacc 447 Query: 393 acccggcgatccttcctgcgggagatggccgggtcggcgcacgacgcgcc 442 ||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 448 acccgccgatcgttcctgcgggagatggccgggtcggcgcacgacgcgcc 497 Score = 73.8 bits (37), Expect = 4e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 1 ataacccacccgaagaagcaaccaagaaaatccccccaatggatcatcg 49 ||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 56 ataacccacccagacaagcaaccaagaaaatccccccaatggatcatcg 104
>ref|XM_507484.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1371_D04.6 mRNA Length = 1523 Score = 250 bits (126), Expect = 3e-63 Identities = 165/178 (92%) Strand = Plus / Plus Query: 202 gcttcgtgcagcggttcgggaagacgtaccgggacgcggaggagcacgcgcaccggctct 261 ||||||| ||| ||||||||||| | ||||| ||||| || ||||||||| ||||||||| Sbjct: 199 gcttcgtccagaggttcgggaagtcctaccgtgacgccgacgagcacgcgtaccggctct 258 Query: 262 ccgtgttcaaggccaacctccgccgcgcgcgccggcaccagctgctcgacccgtccgccg 321 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | Sbjct: 259 ccgtgttcaaggccaacctccgccgcgcgcgccgccaccagctgctcgacccctccgcgg 318 Query: 322 agcacggggtcaccaagttctccgacctcaccccggccgagttccgccggacctacct 379 ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 319 agcacggcgtcaccaagttctccgacctcaccccggccgagttccgccgggcctacct 376 Score = 46.1 bits (23), Expect = 0.096 Identities = 35/39 (89%) Strand = Plus / Plus Query: 123 gaggagcccctgatccggcaggtcgtgggcggcgccgac 161 |||||||| |||||||||||||| || ||||||| |||| Sbjct: 120 gaggagccgctgatccggcaggtggtcggcggcggcgac 158
>ref|XM_507483.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1371_D04.6 mRNA Length = 1480 Score = 250 bits (126), Expect = 3e-63 Identities = 165/178 (92%) Strand = Plus / Plus Query: 202 gcttcgtgcagcggttcgggaagacgtaccgggacgcggaggagcacgcgcaccggctct 261 ||||||| ||| ||||||||||| | ||||| ||||| || ||||||||| ||||||||| Sbjct: 201 gcttcgtccagaggttcgggaagtcctaccgtgacgccgacgagcacgcgtaccggctct 260 Query: 262 ccgtgttcaaggccaacctccgccgcgcgcgccggcaccagctgctcgacccgtccgccg 321 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | Sbjct: 261 ccgtgttcaaggccaacctccgccgcgcgcgccgccaccagctgctcgacccctccgcgg 320 Query: 322 agcacggggtcaccaagttctccgacctcaccccggccgagttccgccggacctacct 379 ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 321 agcacggcgtcaccaagttctccgacctcaccccggccgagttccgccgggcctacct 378 Score = 46.1 bits (23), Expect = 0.096 Identities = 35/39 (89%) Strand = Plus / Plus Query: 123 gaggagcccctgatccggcaggtcgtgggcggcgccgac 161 |||||||| |||||||||||||| || ||||||| |||| Sbjct: 122 gaggagccgctgatccggcaggtggtcggcggcggcgac 160
>ref|XM_465566.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1386 Score = 250 bits (126), Expect = 3e-63 Identities = 165/178 (92%) Strand = Plus / Plus Query: 202 gcttcgtgcagcggttcgggaagacgtaccgggacgcggaggagcacgcgcaccggctct 261 ||||||| ||| ||||||||||| | ||||| ||||| || ||||||||| ||||||||| Sbjct: 202 gcttcgtccagaggttcgggaagtcctaccgtgacgccgacgagcacgcgtaccggctct 261 Query: 262 ccgtgttcaaggccaacctccgccgcgcgcgccggcaccagctgctcgacccgtccgccg 321 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | Sbjct: 262 ccgtgttcaaggccaacctccgccgcgcgcgccgccaccagctgctcgacccctccgcgg 321 Query: 322 agcacggggtcaccaagttctccgacctcaccccggccgagttccgccggacctacct 379 ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 322 agcacggcgtcaccaagttctccgacctcaccccggccgagttccgccgggcctacct 379 Score = 46.1 bits (23), Expect = 0.096 Identities = 35/39 (89%) Strand = Plus / Plus Query: 123 gaggagcccctgatccggcaggtcgtgggcggcgccgac 161 |||||||| |||||||||||||| || ||||||| |||| Sbjct: 123 gaggagccgctgatccggcaggtggtcggcggcggcgac 161
>ref|XM_507482.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1371_D04.6 mRNA Length = 1504 Score = 250 bits (126), Expect = 3e-63 Identities = 165/178 (92%) Strand = Plus / Plus Query: 202 gcttcgtgcagcggttcgggaagacgtaccgggacgcggaggagcacgcgcaccggctct 261 ||||||| ||| ||||||||||| | ||||| ||||| || ||||||||| ||||||||| Sbjct: 203 gcttcgtccagaggttcgggaagtcctaccgtgacgccgacgagcacgcgtaccggctct 262 Query: 262 ccgtgttcaaggccaacctccgccgcgcgcgccggcaccagctgctcgacccgtccgccg 321 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | Sbjct: 263 ccgtgttcaaggccaacctccgccgcgcgcgccgccaccagctgctcgacccctccgcgg 322 Query: 322 agcacggggtcaccaagttctccgacctcaccccggccgagttccgccggacctacct 379 ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 323 agcacggcgtcaccaagttctccgacctcaccccggccgagttccgccgggcctacct 380 Score = 46.1 bits (23), Expect = 0.096 Identities = 35/39 (89%) Strand = Plus / Plus Query: 123 gaggagcccctgatccggcaggtcgtgggcggcgccgac 161 |||||||| |||||||||||||| || ||||||| |||| Sbjct: 124 gaggagccgctgatccggcaggtggtcggcggcggcgac 162
>ref|XM_506801.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1371_D04.6 mRNA Length = 1486 Score = 250 bits (126), Expect = 3e-63 Identities = 165/178 (92%) Strand = Plus / Plus Query: 202 gcttcgtgcagcggttcgggaagacgtaccgggacgcggaggagcacgcgcaccggctct 261 ||||||| ||| ||||||||||| | ||||| ||||| || ||||||||| ||||||||| Sbjct: 207 gcttcgtccagaggttcgggaagtcctaccgtgacgccgacgagcacgcgtaccggctct 266 Query: 262 ccgtgttcaaggccaacctccgccgcgcgcgccggcaccagctgctcgacccgtccgccg 321 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | Sbjct: 267 ccgtgttcaaggccaacctccgccgcgcgcgccgccaccagctgctcgacccctccgcgg 326 Query: 322 agcacggggtcaccaagttctccgacctcaccccggccgagttccgccggacctacct 379 ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 327 agcacggcgtcaccaagttctccgacctcaccccggccgagttccgccgggcctacct 384 Score = 46.1 bits (23), Expect = 0.096 Identities = 35/39 (89%) Strand = Plus / Plus Query: 123 gaggagcccctgatccggcaggtcgtgggcggcgccgac 161 |||||||| |||||||||||||| || ||||||| |||| Sbjct: 128 gaggagccgctgatccggcaggtggtcggcggcggcgac 166
>dbj|AK061947.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-E05, full insert sequence Length = 1504 Score = 250 bits (126), Expect = 3e-63 Identities = 165/178 (92%) Strand = Plus / Plus Query: 202 gcttcgtgcagcggttcgggaagacgtaccgggacgcggaggagcacgcgcaccggctct 261 ||||||| ||| ||||||||||| | ||||| ||||| || ||||||||| ||||||||| Sbjct: 203 gcttcgtccagaggttcgggaagtcctaccgtgacgccgacgagcacgcgtaccggctct 262 Query: 262 ccgtgttcaaggccaacctccgccgcgcgcgccggcaccagctgctcgacccgtccgccg 321 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | Sbjct: 263 ccgtgttcaaggccaacctccgccgcgcgcgccgccaccagctgctcgacccctccgcgg 322 Query: 322 agcacggggtcaccaagttctccgacctcaccccggccgagttccgccggacctacct 379 ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 323 agcacggcgtcaccaagttctccgacctcaccccggccgagttccgccgggcctacct 380
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 250 bits (126), Expect = 3e-63 Identities = 165/178 (92%) Strand = Plus / Plus Query: 202 gcttcgtgcagcggttcgggaagacgtaccgggacgcggaggagcacgcgcaccggctct 261 ||||||| ||| ||||||||||| | ||||| ||||| || ||||||||| ||||||||| Sbjct: 15991572 gcttcgtccagaggttcgggaagtcctaccgtgacgccgacgagcacgcgtaccggctct 15991631 Query: 262 ccgtgttcaaggccaacctccgccgcgcgcgccggcaccagctgctcgacccgtccgccg 321 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | Sbjct: 15991632 ccgtgttcaaggccaacctccgccgcgcgcgccgccaccagctgctcgacccctccgcgg 15991691 Query: 322 agcacggggtcaccaagttctccgacctcaccccggccgagttccgccggacctacct 379 ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 15991692 agcacggcgtcaccaagttctccgacctcaccccggccgagttccgccgggcctacct 15991749 Score = 46.1 bits (23), Expect = 0.096 Identities = 35/39 (89%) Strand = Plus / Plus Query: 123 gaggagcccctgatccggcaggtcgtgggcggcgccgac 161 |||||||| |||||||||||||| || ||||||| |||| Sbjct: 15991493 gaggagccgctgatccggcaggtggtcggcggcggcgac 15991531
>dbj|AP004852.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1371_D04 Length = 105468 Score = 250 bits (126), Expect = 3e-63 Identities = 165/178 (92%) Strand = Plus / Plus Query: 202 gcttcgtgcagcggttcgggaagacgtaccgggacgcggaggagcacgcgcaccggctct 261 ||||||| ||| ||||||||||| | ||||| ||||| || ||||||||| ||||||||| Sbjct: 22507 gcttcgtccagaggttcgggaagtcctaccgtgacgccgacgagcacgcgtaccggctct 22566 Query: 262 ccgtgttcaaggccaacctccgccgcgcgcgccggcaccagctgctcgacccgtccgccg 321 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | Sbjct: 22567 ccgtgttcaaggccaacctccgccgcgcgcgccgccaccagctgctcgacccctccgcgg 22626 Query: 322 agcacggggtcaccaagttctccgacctcaccccggccgagttccgccggacctacct 379 ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 22627 agcacggcgtcaccaagttctccgacctcaccccggccgagttccgccgggcctacct 22684 Score = 46.1 bits (23), Expect = 0.096 Identities = 35/39 (89%) Strand = Plus / Plus Query: 123 gaggagcccctgatccggcaggtcgtgggcggcgccgac 161 |||||||| |||||||||||||| || ||||||| |||| Sbjct: 22428 gaggagccgctgatccggcaggtggtcggcggcggcgac 22466
>dbj|AK119670.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-H07, full insert sequence Length = 1523 Score = 250 bits (126), Expect = 3e-63 Identities = 165/178 (92%) Strand = Plus / Plus Query: 202 gcttcgtgcagcggttcgggaagacgtaccgggacgcggaggagcacgcgcaccggctct 261 ||||||| ||| ||||||||||| | ||||| ||||| || ||||||||| ||||||||| Sbjct: 199 gcttcgtccagaggttcgggaagtcctaccgtgacgccgacgagcacgcgtaccggctct 258 Query: 262 ccgtgttcaaggccaacctccgccgcgcgcgccggcaccagctgctcgacccgtccgccg 321 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | Sbjct: 259 ccgtgttcaaggccaacctccgccgcgcgcgccgccaccagctgctcgacccctccgcgg 318 Query: 322 agcacggggtcaccaagttctccgacctcaccccggccgagttccgccggacctacct 379 ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 319 agcacggcgtcaccaagttctccgacctcaccccggccgagttccgccgggcctacct 376 Score = 46.1 bits (23), Expect = 0.096 Identities = 35/39 (89%) Strand = Plus / Plus Query: 123 gaggagcccctgatccggcaggtcgtgggcggcgccgac 161 |||||||| |||||||||||||| || ||||||| |||| Sbjct: 120 gaggagccgctgatccggcaggtggtcggcggcggcgac 158
>dbj|AK099269.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020I09, full insert sequence Length = 1385 Score = 250 bits (126), Expect = 3e-63 Identities = 165/178 (92%) Strand = Plus / Plus Query: 202 gcttcgtgcagcggttcgggaagacgtaccgggacgcggaggagcacgcgcaccggctct 261 ||||||| ||| ||||||||||| | ||||| ||||| || ||||||||| ||||||||| Sbjct: 201 gcttcgtccagaggttcgggaagtcctaccgtgacgccgacgagcacgcgtaccggctct 260 Query: 262 ccgtgttcaaggccaacctccgccgcgcgcgccggcaccagctgctcgacccgtccgccg 321 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | Sbjct: 261 ccgtgttcaaggccaacctccgccgcgcgcgccgccaccagctgctcgacccctccgcgg 320 Query: 322 agcacggggtcaccaagttctccgacctcaccccggccgagttccgccggacctacct 379 ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 321 agcacggcgtcaccaagttctccgacctcaccccggccgagttccgccgggcctacct 378 Score = 46.1 bits (23), Expect = 0.096 Identities = 35/39 (89%) Strand = Plus / Plus Query: 123 gaggagcccctgatccggcaggtcgtgggcggcgccgac 161 |||||||| |||||||||||||| || ||||||| |||| Sbjct: 122 gaggagccgctgatccggcaggtggtcggcggcggcgac 160
>dbj|AK098908.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002F17, full insert sequence Length = 1480 Score = 250 bits (126), Expect = 3e-63 Identities = 165/178 (92%) Strand = Plus / Plus Query: 202 gcttcgtgcagcggttcgggaagacgtaccgggacgcggaggagcacgcgcaccggctct 261 ||||||| ||| ||||||||||| | ||||| ||||| || ||||||||| ||||||||| Sbjct: 201 gcttcgtccagaggttcgggaagtcctaccgtgacgccgacgagcacgcgtaccggctct 260 Query: 262 ccgtgttcaaggccaacctccgccgcgcgcgccggcaccagctgctcgacccgtccgccg 321 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | Sbjct: 261 ccgtgttcaaggccaacctccgccgcgcgcgccgccaccagctgctcgacccctccgcgg 320 Query: 322 agcacggggtcaccaagttctccgacctcaccccggccgagttccgccggacctacct 379 ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 321 agcacggcgtcaccaagttctccgacctcaccccggccgagttccgccgggcctacct 378 Score = 46.1 bits (23), Expect = 0.096 Identities = 35/39 (89%) Strand = Plus / Plus Query: 123 gaggagcccctgatccggcaggtcgtgggcggcgccgac 161 |||||||| |||||||||||||| || ||||||| |||| Sbjct: 122 gaggagccgctgatccggcaggtggtcggcggcggcgac 160
>dbj|AK071907.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063O07, full insert sequence Length = 1486 Score = 250 bits (126), Expect = 3e-63 Identities = 165/178 (92%) Strand = Plus / Plus Query: 202 gcttcgtgcagcggttcgggaagacgtaccgggacgcggaggagcacgcgcaccggctct 261 ||||||| ||| ||||||||||| | ||||| ||||| || ||||||||| ||||||||| Sbjct: 207 gcttcgtccagaggttcgggaagtcctaccgtgacgccgacgagcacgcgtaccggctct 266 Query: 262 ccgtgttcaaggccaacctccgccgcgcgcgccggcaccagctgctcgacccgtccgccg 321 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | Sbjct: 267 ccgtgttcaaggccaacctccgccgcgcgcgccgccaccagctgctcgacccctccgcgg 326 Query: 322 agcacggggtcaccaagttctccgacctcaccccggccgagttccgccggacctacct 379 ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 327 agcacggcgtcaccaagttctccgacctcaccccggccgagttccgccgggcctacct 384 Score = 46.1 bits (23), Expect = 0.096 Identities = 35/39 (89%) Strand = Plus / Plus Query: 123 gaggagcccctgatccggcaggtcgtgggcggcgccgac 161 |||||||| |||||||||||||| || ||||||| |||| Sbjct: 128 gaggagccgctgatccggcaggtggtcggcggcggcgac 166
>gb|AY104312.1| Zea mays PCO074362 mRNA sequence Length = 2610 Score = 210 bits (106), Expect = 3e-51 Identities = 160/178 (89%) Strand = Plus / Plus Query: 202 gcttcgtgcagcggttcgggaagacgtaccgggacgcggaggagcacgcgcaccggctct 261 ||||||||||||||||||| ||| | ||| |||||| || ||||||||| ||||||| | Sbjct: 233 gcttcgtgcagcggttcggcaagtcctacaaggacgccgacgagcacgcgtaccggctgt 292 Query: 262 ccgtgttcaaggccaacctccgccgcgcgcgccggcaccagctgctcgacccgtccgccg 321 |||| |||||||||||||| |||||||||||||||||||||||||| |||||||| || | Sbjct: 293 ccgttttcaaggccaacctgcgccgcgcgcgccggcaccagctgctggacccgtcggcgg 352 Query: 322 agcacggggtcaccaagttctccgacctcaccccggccgagttccgccggacctacct 379 ||||||| ||||| ||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 353 agcacggcgtcactaagttctccgacctcacgccggcagagttccgccggacctacct 410
>dbj|D45402.1|MZECP Corn mRNA for cysteine proteinase, clone CCP, complete cds Length = 1311 Score = 202 bits (102), Expect = 7e-49 Identities = 159/178 (89%) Strand = Plus / Plus Query: 202 gcttcgtgcagcggttcgggaagacgtaccgggacgcggaggagcacgcgcaccggctct 261 ||||||||||||||||||| ||| | ||| |||||| || ||||||||| ||||||| | Sbjct: 172 gcttcgtgcagcggttcggcaagtcctacaaggacgccgacgagcacgcgtaccggctgt 231 Query: 262 ccgtgttcaaggccaacctccgccgcgcgcgccggcaccagctgctcgacccgtccgccg 321 |||| ||||||| |||||| |||||||||||||||||||||||||| |||||||| || | Sbjct: 232 ccgttttcaaggacaacctgcgccgcgcgcgccggcaccagctgctggacccgtcggcgg 291 Query: 322 agcacggggtcaccaagttctccgacctcaccccggccgagttccgccggacctacct 379 ||||||| ||||| ||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 292 agcacggcgtcactaagttctccgacctcacgccggcagagttccgccggacctacct 349
>ref|XM_471773.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1146 Score = 141 bits (71), Expect = 2e-30 Identities = 143/167 (85%) Strand = Plus / Plus Query: 202 gcttcgtgcagcggttcgggaagacgtaccgggacgcggaggagcacgcgcaccggctct 261 |||||| || |||||||||| ||||||||||||||| | |||| |||| ||||| | | Sbjct: 179 gcttcgagcggcggttcgggcggacgtaccgggacgccggcgagcgcgcgtaccggatgt 238 Query: 262 ccgtgttcaaggccaacctccgccgcgcgcgccggcaccagctgctcgacccgtccgccg 321 |||||||| |||||||||||||||||||| |||||||||| ||| ||||| |||| Sbjct: 239 ccgtgttcgccgccaacctccgccgcgcgcggcggcaccagcggctggaccccaccgcga 298 Query: 322 agcacggggtcaccaagttctccgacctcaccccggccgagttccgc 368 |||||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 299 cgcacggcgtcaccaagttctccgacctcaccccgggcgagttccgc 345
>emb|AL663007.2|OSJN00206 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0054B09, complete sequence Length = 146506 Score = 141 bits (71), Expect = 2e-30 Identities = 143/167 (85%) Strand = Plus / Plus Query: 202 gcttcgtgcagcggttcgggaagacgtaccgggacgcggaggagcacgcgcaccggctct 261 |||||| || |||||||||| ||||||||||||||| | |||| |||| ||||| | | Sbjct: 19978 gcttcgagcggcggttcgggcggacgtaccgggacgccggcgagcgcgcgtaccggatgt 20037 Query: 262 ccgtgttcaaggccaacctccgccgcgcgcgccggcaccagctgctcgacccgtccgccg 321 |||||||| |||||||||||||||||||| |||||||||| ||| ||||| |||| Sbjct: 20038 ccgtgttcgccgccaacctccgccgcgcgcggcggcaccagcggctggaccccaccgcga 20097 Query: 322 agcacggggtcaccaagttctccgacctcaccccggccgagttccgc 368 |||||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 20098 cgcacggcgtcaccaagttctccgacctcaccccgggcgagttccgc 20144
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 141 bits (71), Expect = 2e-30 Identities = 143/167 (85%) Strand = Plus / Plus Query: 202 gcttcgtgcagcggttcgggaagacgtaccgggacgcggaggagcacgcgcaccggctct 261 |||||| || |||||||||| ||||||||||||||| | |||| |||| ||||| | | Sbjct: 14182212 gcttcgagcggcggttcgggcggacgtaccgggacgccggcgagcgcgcgtaccggatgt 14182271 Query: 262 ccgtgttcaaggccaacctccgccgcgcgcgccggcaccagctgctcgacccgtccgccg 321 |||||||| |||||||||||||||||||| |||||||||| ||| ||||| |||| Sbjct: 14182272 ccgtgttcgccgccaacctccgccgcgcgcggcggcaccagcggctggaccccaccgcga 14182331 Query: 322 agcacggggtcaccaagttctccgacctcaccccggccgagttccgc 368 |||||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 14182332 cgcacggcgtcaccaagttctccgacctcaccccgggcgagttccgc 14182378
>dbj|AK071948.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013078J21, full insert sequence Length = 1334 Score = 141 bits (71), Expect = 2e-30 Identities = 143/167 (85%) Strand = Plus / Plus Query: 202 gcttcgtgcagcggttcgggaagacgtaccgggacgcggaggagcacgcgcaccggctct 261 |||||| || |||||||||| ||||||||||||||| | |||| |||| ||||| | | Sbjct: 233 gcttcgagcggcggttcgggcggacgtaccgggacgccggcgagcgcgcgtaccggatgt 292 Query: 262 ccgtgttcaaggccaacctccgccgcgcgcgccggcaccagctgctcgacccgtccgccg 321 |||||||| |||||||||||||||||||| |||||||||| ||| ||||| |||| Sbjct: 293 ccgtgttcgccgccaacctccgccgcgcgcggcggcaccagcggctggaccccaccgcga 352 Query: 322 agcacggggtcaccaagttctccgacctcaccccggccgagttccgc 368 |||||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 353 cgcacggcgtcaccaagttctccgacctcaccccgggcgagttccgc 399
>gb|AF411121.1| Sandersonia aurantiaca cysteine proteinase precursor (PRT22) mRNA, partial cds Length = 1310 Score = 73.8 bits (37), Expect = 4e-10 Identities = 100/121 (82%) Strand = Plus / Plus Query: 259 tctccgtgttcaaggccaacctccgccgcgcgcgccggcaccagctgctcgacccgtccg 318 ||||||| |||||| | || ||||||||||| | ||||||||| |||||||| ||| Sbjct: 197 tctccgtcttcaagtctaatctccgccgcgccaggaggcaccagcgcctcgaccccaccg 256 Query: 319 ccgagcacggggtcaccaagttctccgacctcaccccggccgagttccgccggacctacc 378 ||| ||||| ||||||| |||| | ||||||||||| ||||||||||||| ||||||| Sbjct: 257 ccgtccacggcgtcaccaggttcgctgacctcaccccctccgagttccgccgcacctacc 316 Query: 379 t 379 | Sbjct: 317 t 317
>gb|AY504968.1| Iris hollandica putative cysteine protease 3 (CYS3) mRNA, complete cds Length = 1286 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 295 ggcaccagctgctcgacccgtccgccgagcacggggtcaccaagttctccgacctcaccc 354 ||||||||| ||||||||| |||||| ||||| |||||| |||||||||||||||||| Sbjct: 218 ggcaccagcagctcgaccccaccgccgtccacggcgtcacccagttctccgacctcaccc 277 Query: 355 c 355 | Sbjct: 278 c 278
>gb|DQ084023.1| Nicotiana benthamiana cysteine proteinase glycinain type mRNA, partial cds Length = 1086 Score = 65.9 bits (33), Expect = 1e-07 Identities = 93/113 (82%) Strand = Plus / Plus Query: 267 ttcaaggccaacctccgccgcgcgcgccggcaccagctgctcgacccgtccgccgagcac 326 |||||||| ||||||||||| ||||| || || ||||| || ||||| |||||||| ||| Sbjct: 237 ttcaaggcaaacctccgccgtgcgcggcgtcatcagctccttgacccttccgccgaacac 296 Query: 327 ggggtcaccaagttctccgacctcaccccggccgagttccgccggacctacct 379 || | || ||||||||||| || || || | |||||||||||||| ||||| Sbjct: 297 ggtattacaaagttctccgatcttactccatcggagttccgccggacttacct 349
>emb|AJ242994.1|NTA242994 Nicotiana tabacum mRNA for putative preprocysteine proteinase Length = 1431 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 267 ttcaaggccaacctccgccgcgcgcgccggcaccagctgctcgacccgtccgccgagcac 326 |||||||| ||||||||||| || || || || ||||| || ||||| |||||||| ||| Sbjct: 291 ttcaaggcgaacctccgccgtgcacggcgtcatcagctccttgacccttccgccgaacac 350 Query: 327 ggggtcaccaagttctccgacctcaccccggccgagttccgccggacctacctggggct 385 || | || ||||||||||| || || ||| | ||||| |||||||| ||||| ||||| Sbjct: 351 ggtattacgaagttctccgatcttactccgtcggagtttcgccggacttaccttgggct 409
>gb|U71380.1|GMU71380 Glycine max thiol protease isoform A mRNA, partial cds Length = 1221 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 324 cacggggtcaccaagttctccgacctcaccccggccgagttccgccg 370 ||||| |||||||| |||||||| || || ||||||||||||||||| Sbjct: 143 cacggcgtcaccaaattctccgatctaactccggccgagttccgccg 189
>gb|U71379.1|GMU71379 Glycine max thiol protease isoform B mRNA, partial cds Length = 1073 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 324 cacggggtcaccaagttctccgacctcaccccggccgagttccgccg 370 ||||| |||||||| |||||||| || || ||||||||||||||||| Sbjct: 143 cacggcgtcaccaaattctccgatctaactccggccgagttccgccg 189
>gb|AY373974.1| Ipomoea batatas cysteine proteinase precursor, mRNA, complete cds Length = 1309 Score = 52.0 bits (26), Expect = 0.002 Identities = 92/114 (80%) Strand = Plus / Plus Query: 239 ggaggagcacgcgcaccggctctccgtgttcaaggccaacctccgccgcgcgcgccggca 298 ||||||||||| || |||||||||| |||||||| ||| | |||||||| || || Sbjct: 196 ggaggagcacgactacaggctctccgtcttcaaggctaacttgcgccgcgctaagcgcca 255 Query: 299 ccagctgctcgacccgtccgccgagcacggggtcaccaagttctccgacctcac 352 |||| |||| || || ||||||| ||||| ||||| ||||||||||| ||||| Sbjct: 256 ccagatgctggatccctccgccgtccacggcgtcacgaagttctccgatctcac 309
>gb|AY017414.1| Nicotiana tabacum CPR2-like cysteine proteinase gene, complete cds Length = 2107 Score = 50.1 bits (25), Expect = 0.006 Identities = 91/113 (80%) Strand = Plus / Plus Query: 267 ttcaaggccaacctccgccgcgcgcgccggcaccagctgctcgacccgtccgccgagcac 326 |||||||| |||| |||||| || || || || ||||| || ||||| |||||||| ||| Sbjct: 224 ttcaaggcgaaccgccgccgtgcacggcgtcatcagctccttgacccttccgccgaacac 283 Query: 327 ggggtcaccaagttctccgacctcaccccggccgagttccgccggacctacct 379 || | || ||||||||||| || || ||| | ||||| |||||||| ||||| Sbjct: 284 ggtattacgaagttctccgatcttactccgtcggagtttcgccggacttacct 336
>emb|X76076.1|SLRECA S.lividans RecA gene Length = 2085 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Plus Query: 94 cggcgccggcgacggcggccgcg 116 ||||||||||||||||||||||| Sbjct: 294 cggcgccggcgacggcggccgcg 316
>gb|AF138266.1|AF138266 Ipomoea batatas papain-like cysteine proteinase isoform III (IBPCPIII) mRNA, complete cds Length = 1144 Score = 46.1 bits (23), Expect = 0.096 Identities = 74/91 (81%) Strand = Plus / Plus Query: 256 ggctctccgtgttcaaggccaacctccgccgcgcgcgccggcaccagctgctcgacccgt 315 ||||||| ||||||||||| ||| | |||||||| || ||||||| ||||||||| Sbjct: 221 ggctctcggtgttcaaggctaacatgcgccgcgcaaagcgacaccagcagctcgaccctg 280 Query: 316 ccgccgagcacggggtcaccaagttctccga 346 |||||| ||||| ||||| |||||||||| Sbjct: 281 ccgccgtccacggcgtcactcagttctccga 311
>gb|AF216785.1|AF216785 Ipomoea batatas papain-like cysteine proteinase isoform III (PCPIII) gene, complete cds Length = 1473 Score = 46.1 bits (23), Expect = 0.096 Identities = 74/91 (81%) Strand = Plus / Plus Query: 256 ggctctccgtgttcaaggccaacctccgccgcgcgcgccggcaccagctgctcgacccgt 315 ||||||| ||||||||||| ||| | |||||||| || ||||||| ||||||||| Sbjct: 219 ggctctcggtgttcaaggctaacatgcgccgcgcaaagcgacaccagcagctcgaccccg 278 Query: 316 ccgccgagcacggggtcaccaagttctccga 346 |||||| ||||| ||||| |||||||||| Sbjct: 279 ccgccgtccacggcgtcactcagttctccga 309
>ref|NM_185019.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1389 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 94 cggcgccggcgacggcggccgc 115 |||||||||||||||||||||| Sbjct: 1295 cggcgccggcgacggcggccgc 1316
>gb|BT017759.1| Zea mays clone EL01N0501D06.c mRNA sequence Length = 1131 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 354 ccggccgagttccgccggacctacct 379 ||||| |||||||||||||||||||| Sbjct: 15 ccggcagagttccgccggacctacct 40
>gb|AC135599.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0045P14, complete sequence Length = 121894 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 279 ctccgccgcgcgcgccggcaccagct 304 ||||||||||||||||| |||||||| Sbjct: 61382 ctccgccgcgcgcgccgccaccagct 61407
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 94 cggcgccggcgacggcggccgc 115 |||||||||||||||||||||| Sbjct: 32237133 cggcgccggcgacggcggccgc 32237112 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 94 cggcgccggcgacggcggccgcgg 117 ||||||||||||||||||| |||| Sbjct: 25622258 cggcgccggcgacggcggcggcgg 25622281 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 ccggcgccggcgacggcggc 112 |||||||||||||||||||| Sbjct: 12808864 ccggcgccggcgacggcggc 12808845
>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29 Length = 277000 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 94 cggcgccggcgacggcggccgc 115 |||||||||||||||||||||| Sbjct: 103199 cggcgccggcgacggcggccgc 103220
>gb|AC091123.4| Oryza sativa chromosome 3 BAC OSJNBb0093E13 genomic sequence, complete sequence Length = 129778 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 94 cggcgccggcgacggcggccgc 115 |||||||||||||||||||||| Sbjct: 88807 cggcgccggcgacggcggccgc 88786
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 279 ctccgccgcgcgcgccggcaccagct 304 ||||||||||||||||| |||||||| Sbjct: 10871862 ctccgccgcgcgcgccgccaccagct 10871887 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 93 ccggcgccggcgacggcggccgcgg 117 |||||||||||||||||||| |||| Sbjct: 17573703 ccggcgccggcgacggcggcggcgg 17573727 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 ccggcgccggcgacggcggc 112 |||||||||||||||||||| Sbjct: 16705909 ccggcgccggcgacggcggc 16705928
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 94 cggcgccggcgacggcggccgc 115 |||||||||||||||||||||| Sbjct: 32327645 cggcgccggcgacggcggccgc 32327624 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 94 cggcgccggcgacggcggccgcgg 117 ||||||||||||||||||| |||| Sbjct: 25713567 cggcgccggcgacggcggcggcgg 25713590 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 ccggcgccggcgacggcggc 112 |||||||||||||||||||| Sbjct: 12805627 ccggcgccggcgacggcggc 12805608
>dbj|AK109882.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-D05, full insert sequence Length = 2714 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 279 ctccgccgcgcgcgccggcaccagct 304 ||||||||||||||||| |||||||| Sbjct: 405 ctccgccgcgcgcgccgccaccagct 430
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 279 ctccgccgcgcgcgccggcaccagct 304 ||||||||||||||||| |||||||| Sbjct: 10951051 ctccgccgcgcgcgccgccaccagct 10951076 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 93 ccggcgccggcgacggcggccgcgg 117 |||||||||||||||||||| |||| Sbjct: 17667527 ccggcgccggcgacggcggcggcgg 17667551 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 ccggcgccggcgacggcggc 112 |||||||||||||||||||| Sbjct: 16799680 ccggcgccggcgacggcggc 16799699
>gb|AC137759.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0008H02, complete sequence Length = 143438 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 93 ccggcgccggcgacggcggccgcgg 117 |||||||||||||||||||| |||| Sbjct: 81514 ccggcgccggcgacggcggcggcgg 81538
>gb|AY463333.1| Uncultured bacterium clone PP13 carbon monoxide dehydrogenase form I large subunit (coxL) gene, partial cds Length = 449 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 353 cccggccgagttccgccggacctacctgg 381 |||||||||||||||||||| | |||||| Sbjct: 90 cccggccgagttccgccggatcaacctgg 118
>gb|AY144352.1| Diaulula sandiegensis 28S large subunit ribosomal RNA gene, complete sequence Length = 3531 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gccgcgcgcgccggcaccagc 303 ||||||||||||||||||||| Sbjct: 216 gccgcgcgcgccggcaccagc 196
>emb|Z13959.1|NTCYP7 N.tabacum mRNA for pre-pro-cysteine proteinase Length = 1304 Score = 42.1 bits (21), Expect = 1.5 Identities = 90/113 (79%) Strand = Plus / Plus Query: 267 ttcaaggccaacctccgccgcgcgcgccggcaccagctgctcgacccgtccgccgagcac 326 |||||||| ||||||||||| || || | | ||||| || ||||| |||||||| ||| Sbjct: 217 ttcaaggcgaacctccgccgtgcacggctcaatcagctccttgacccttccgccgaacac 276 Query: 327 ggggtcaccaagttctccgacctcaccccggccgagttccgccggacctacct 379 || | || ||||||||||| || || ||| | ||||| |||||||| ||||| Sbjct: 277 ggtattacgaagttctccgatcttactccgtcggagtttcgccggacttacct 329
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 403 ccttcctgcgggagatggccg 423 ||||||||||||||||||||| Sbjct: 278774 ccttcctgcgggagatggccg 278794
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 100 cggcgacggcggccgcgggggacgaggag 128 ||||| ||||||| ||||||||||||||| Sbjct: 7545848 cggcggcggcggcggcgggggacgaggag 7545820 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 cggcgccggcgacggcggcc 113 |||||||||||||||||||| Sbjct: 19475491 cggcgccggcgacggcggcc 19475472
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 278 cctccgccgcgcgcgccggca 298 ||||||||||||||||||||| Sbjct: 16261035 cctccgccgcgcgcgccggca 16261015 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 94 cggcgccggcgacggcggccgcgg 117 ||||| |||||||||||||||||| Sbjct: 1093237 cggcggcggcgacggcggccgcgg 1093260
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 100 cggcgacggcggccgcgggggacgaggag 128 ||||| ||||||| ||||||||||||||| Sbjct: 28582664 cggcggcggcggcggcgggggacgaggag 28582692 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 93 ccggcgccggcgacggcggccgcgggggacgaggag 128 |||||||||||| ||||||| |||| | |||||||| Sbjct: 14315799 ccggcgccggcggcggcggcggcggagtacgaggag 14315834 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 97 cgccggcgacggcggccgcgggggacgaggag 128 |||||||||||||||| |||| ||| |||||| Sbjct: 3404517 cgccggcgacggcggcggcggaggaggaggag 3404486
>gb|AY427447.1| Dendrodoris fumata 28S ribosomal RNA gene, partial sequence Length = 1062 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gccgcgcgcgccggcaccagc 303 ||||||||||||||||||||| Sbjct: 213 gccgcgcgcgccggcaccagc 193
>gb|AY427446.1| Hypselodoris villafranca 28S ribosomal RNA gene, partial sequence Length = 1071 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 gccgcgcgcgccggcaccagc 303 ||||||||||||||||||||| Sbjct: 213 gccgcgcgcgccggcaccagc 193
>gb|AC156446.2| Volvox carteri clone JGIAOBO-29H23, complete sequence Length = 31927 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 ccggcgccggcgacggcggccgcgg 117 |||||||||||||||||||| |||| Sbjct: 16236 ccggcgccggcgacggcggcagcgg 16212
>dbj|AP003450.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0034C09 Length = 170226 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 100 cggcgacggcggccgcgggggacgaggag 128 ||||| ||||||| ||||||||||||||| Sbjct: 109103 cggcggcggcggcggcgggggacgaggag 109131
>dbj|AP004742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0026F02 Length = 132237 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 278 cctccgccgcgcgcgccggca 298 ||||||||||||||||||||| Sbjct: 85927 cctccgccgcgcgcgccggca 85907
>dbj|AK101913.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071H09, full insert sequence Length = 1494 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 ccggcgccggcgacggcggccgcgg 117 |||||||||||||||||||| |||| Sbjct: 1119 ccggcgccggcgacggcggcggcgg 1095
>dbj|AK099692.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073N05, full insert sequence Length = 2071 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 278 cctccgccgcgcgcgccggca 298 ||||||||||||||||||||| Sbjct: 1055 cctccgccgcgcgcgccggca 1075
>dbj|AK068145.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134J07, full insert sequence Length = 1886 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 100 cggcgacggcggccgcgggggacgaggag 128 ||||| ||||||| ||||||||||||||| Sbjct: 252 cggcggcggcggcggcgggggacgaggag 224
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 ggcgccggcgacggcggccgc 115 ||||||||||||||||||||| Sbjct: 683214 ggcgccggcgacggcggccgc 683234 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 ccgccgcgcgcgccggcaccagct 304 |||||||||||||| ||||||||| Sbjct: 1818187 ccgccgcgcgcgcctgcaccagct 1818164
>gb|AF029857.1|AF029857 Sorghum bicolor cytochrome P450 CYP99A1 (CYP99A1) mRNA, partial cds Length = 1689 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 93 ccggcgccggcgacggcggccgcgg 117 |||||||||||| |||||||||||| Sbjct: 476 ccggcgccggcggcggcggccgcgg 500
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 100 cggcgacggcggccgcgggggacgaggag 128 ||||| ||||||| ||||||||||||||| Sbjct: 7545727 cggcggcggcggcggcgggggacgaggag 7545699 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 cggcgccggcgacggcggcc 113 |||||||||||||||||||| Sbjct: 19401704 cggcgccggcgacggcggcc 19401685
>emb|AL731872.2|CNS08C8C Oryza sativa chromosome 12, . BAC OJ1003_E07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 113215 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 100 cggcgacggcggccgcgggggacgaggag 128 ||||| ||||||| ||||||||||||||| Sbjct: 33915 cggcggcggcggcggcgggggacgaggag 33887
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 94 cggcgccggcgacggcggccgcggg 118 |||||||||||||||||||| |||| Sbjct: 142299 cggcgccggcgacggcggcctcggg 142275
>ref|XM_483425.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1449 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 ggccaacctccgccgcgcgc 291 |||||||||||||||||||| Sbjct: 441 ggccaacctccgccgcgcgc 460
>ref|XM_475146.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 750 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 ccggcgccggcgacggcggc 112 |||||||||||||||||||| Sbjct: 31 ccggcgccggcgacggcggc 12
>ref|XM_480148.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1210 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 ccggcgccggcgacggcggc 112 |||||||||||||||||||| Sbjct: 52 ccggcgccggcgacggcggc 71
>ref|NM_197441.1| Oryza sativa (japonica cultivar-group) cytochrome P450-like protein (OSJNBb0005J14.26), mRNA Length = 1551 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 cggcgccggcgacggcggcc 113 |||||||||||||||||||| Sbjct: 52 cggcgccggcgacggcggcc 33
>ref|NM_193976.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1494 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 93 ccggcgccggcgacggcggccgcgggggacgaggag 128 |||||||||||| ||||||| |||| | |||||||| Sbjct: 242 ccggcgccggcggcggcggcggcggagtacgaggag 207
>gb|BT016603.1| Zea mays clone Contig436 mRNA sequence Length = 1526 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 94 cggcgccggcgacggcggccgcgg 117 ||||||||||| |||||||||||| Sbjct: 221 cggcgccggcgccggcggccgcgg 244
>gb|AC130597.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017K09, complete sequence Length = 155525 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 ccggcgccggcgacggcggc 112 |||||||||||||||||||| Sbjct: 45925 ccggcgccggcgacggcggc 45944
>gb|AC136378.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0047D03, complete sequence Length = 126165 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 ccggcgccggcgacggcggc 112 |||||||||||||||||||| Sbjct: 87023 ccggcgccggcgacggcggc 87042
>gb|AC119289.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0025P09, complete sequence Length = 167318 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 ccggcgccggcgacggcggc 112 |||||||||||||||||||| Sbjct: 67072 ccggcgccggcgacggcggc 67053
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 ccggcgccggcgacggcggccgcg 116 |||||||||||| ||||||||||| Sbjct: 3902314 ccggcgccggcgccggcggccgcg 3902337
>gb|AC136787.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052B22, complete sequence Length = 156725 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 ccggcgccggcgacggcggc 112 |||||||||||||||||||| Sbjct: 21472 ccggcgccggcgacggcggc 21491
>gb|AC148339.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1339A06, complete sequence Length = 132243 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 ccggcgccggcgacggcggc 112 |||||||||||||||||||| Sbjct: 47080 ccggcgccggcgacggcggc 47061
>gb|AC139174.3| Oryza sativa chromosome 3 BAC OSJNBb0065L20 genomic sequence, complete sequence Length = 167427 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 cggcgccggcgacggcggccgcgg 117 ||||||||||||||||||| |||| Sbjct: 80093 cggcgccggcgacggcggcggcgg 80070
>gb|AC124601.5| Mus musculus BAC clone RP23-27M3 from chromosome 12, complete sequence Length = 237876 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 atccttcctgcgggagatgg 420 |||||||||||||||||||| Sbjct: 122971 atccttcctgcgggagatgg 122990
>emb|X54107.1|SCPSCL S.clavuligerus linear plasmid pSCL (complete sequence) Length = 11696 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 aggagcacgcgcaccggctc 260 |||||||||||||||||||| Sbjct: 4723 aggagcacgcgcaccggctc 4742
>emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete genome; segment 13/29 Length = 293050 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cggccgagttccgccggacc 374 |||||||||||||||||||| Sbjct: 72479 cggccgagttccgccggacc 72460
>emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete genome; segment 2/29 Length = 291000 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 cggcgacggcggccgcgggg 119 |||||||||||||||||||| Sbjct: 152495 cggcgacggcggccgcgggg 152476
>emb|AL935054.11| Mouse DNA sequence from clone RP23-280A12 on chromosome 11 Contains the 5' end of the gene for a novel protein (C330012F17Rik, C130096N06Rik), a ribosomal protein L37a (Rpl37a) pseudogene, a pseudogene similar to part of a novel protein (D130064H19Rik), a fibrillarin (Fbl) pseudogene, the 5' end of the gene for a novel protein (4931428D14Rik) (2300003H10) and three CpG islands, complete sequence Length = 199018 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 gaagcaaccaagaaaatcccccca 38 ||||||||||||||||| |||||| Sbjct: 51086 gaagcaaccaagaaaatgccccca 51109
>dbj|AP008931.1| Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence Length = 271577 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 cggcgccggcgacggcggcc 113 |||||||||||||||||||| Sbjct: 220163 cggcgccggcgacggcggcc 220144
>gb|AC068924.11| Oryza sativa chromosome 10 BAC OSJNBa0026L12 genomic sequence, complete sequence Length = 152172 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 cggcgacggcggccgcgggggacg 123 ||||||||||||| |||||||||| Sbjct: 19671 cggcgacggcggcggcgggggacg 19648
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 cggcgccggcgacggcggcc 113 |||||||||||||||||||| Sbjct: 19911260 cggcgccggcgacggcggcc 19911279 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 100 cggcgacggcggccgcgggggacg 123 ||||||||||||| |||||||||| Sbjct: 19356710 cggcgacggcggcggcgggggacg 19356733
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 ggccaacctccgccgcgcgc 291 |||||||||||||||||||| Sbjct: 26145414 ggccaacctccgccgcgcgc 26145395 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cggcgacggcggccgcgggg 119 |||||||||||||||||||| Sbjct: 16579079 cggcgacggcggccgcgggg 16579098 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 ccggcgccggcgacggcggc 112 |||||||||||||||||||| Sbjct: 3095720 ccggcgccggcgacggcggc 3095739
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 ccggcgccggcgacggcggc 112 |||||||||||||||||||| Sbjct: 24531743 ccggcgccggcgacggcggc 24531762 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 ccggcgccggcgacggcggc 112 |||||||||||||||||||| Sbjct: 17807118 ccggcgccggcgacggcggc 17807099
>gb|AF079317.1| Sphingomonas aromaticivorans plasmid pNL1, complete plasmid sequence Length = 184457 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccgtgttcaaggccaacctc 281 |||||||||||||||||||| Sbjct: 105934 ccgtgttcaaggccaacctc 105915
>gb|AC152939.2| Mus musculus BAC clone RP23-312I2 from chromosome 7, complete sequence Length = 205980 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 94 cggcgccggcgacggcggccgcgg 117 ||||| |||||||||||||||||| Sbjct: 94299 cggcggcggcgacggcggccgcgg 94322
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 cggcgccggcgacggcggcc 113 |||||||||||||||||||| Sbjct: 74783 cggcgccggcgacggcggcc 74764
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cccctgatccggcaggtcgt 148 |||||||||||||||||||| Sbjct: 3727780 cccctgatccggcaggtcgt 3727799
>dbj|AP003457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0660D08 Length = 146915 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 94 cggcgccggcgacggcggccgcgg 117 ||||| |||||||||||||||||| Sbjct: 69460 cggcggcggcgacggcggccgcgg 69483
>dbj|AP003301.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0701D05 Length = 172161 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 97 cgccggcgacggcggccgcgggggacgaggag 128 |||||||||||||||| |||| ||| |||||| Sbjct: 82887 cgccggcgacggcggcggcggaggaggaggag 82856
>dbj|AP003207.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1157F09 Length = 148802 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 93 ccggcgccggcgacggcggccgcgggggacgaggag 128 |||||||||||| ||||||| |||| | |||||||| Sbjct: 67076 ccggcgccggcggcggcggcggcggagtacgaggag 67111
>dbj|AP002870.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0458A05 Length = 120593 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 93 ccggcgccggcgacggcggccgcgggggacgaggag 128 |||||||||||| ||||||| |||| | |||||||| Sbjct: 111489 ccggcgccggcggcggcggcggcggagtacgaggag 111524
>dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1191_A10 Length = 140643 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 ggccaacctccgccgcgcgc 291 |||||||||||||||||||| Sbjct: 89345 ggccaacctccgccgcgcgc 89326
>dbj|AP005628.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1014_E02 Length = 159669 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cggcgacggcggccgcgggg 119 |||||||||||||||||||| Sbjct: 50903 cggcgacggcggccgcgggg 50922
>dbj|AK120976.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041L20, full insert sequence Length = 2032 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 93 ccggcgccggcgacggcggccgcgggggacgaggag 128 |||||||||||| ||||||| |||| | |||||||| Sbjct: 288 ccggcgccggcggcggcggcggcggagtacgaggag 253
>dbj|AP005467.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1349_D05 Length = 174478 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 ccggcgccggcgacggcggc 112 |||||||||||||||||||| Sbjct: 146443 ccggcgccggcgacggcggc 146462
>dbj|AP003940.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1066_B03 Length = 115339 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 ccggcgccggcgacggcggc 112 |||||||||||||||||||| Sbjct: 55204 ccggcgccggcgacggcggc 55223
>dbj|AK108087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-H10, full insert sequence Length = 997 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 ccggcgccggcgacggcggc 112 |||||||||||||||||||| Sbjct: 73 ccggcgccggcgacggcggc 54
>gb|AC155306.2| Mus musculus BAC clone RP24-211K15 from 13, complete sequence Length = 153008 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 agcaaccaagaaaatccccc 36 |||||||||||||||||||| Sbjct: 24822 agcaaccaagaaaatccccc 24803
>dbj|AK063541.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-C06, full insert sequence Length = 1210 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 ccggcgccggcgacggcggc 112 |||||||||||||||||||| Sbjct: 52 ccggcgccggcgacggcggc 71
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 cgccggcgacggcggccgcg 116 |||||||||||||||||||| Sbjct: 1366039 cgccggcgacggcggccgcg 1366058
>gb|U68299.1|MCU68299 Mouse cytomegalovirus 1 complete genomic sequence Length = 230278 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 102 gcgacggcggccgcgggggacgag 125 |||||||||||||||| ||||||| Sbjct: 110048 gcgacggcggccgcggcggacgag 110025
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 ccggcgccggcgacggcggccgcg 116 |||| ||||||||||||||||||| Sbjct: 995051 ccggggccggcgacggcggccgcg 995028
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 cggcgccggcgacggcggcc 113 |||||||||||||||||||| Sbjct: 19922536 cggcgccggcgacggcggcc 19922555 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 100 cggcgacggcggccgcgggggacg 123 ||||||||||||| |||||||||| Sbjct: 19367986 cggcgacggcggcggcgggggacg 19368009
>emb|AL954828.3|CNS08CD4 Oryza sativa chromosome 12, . BAC OSJNBa0022M02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 163490 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 cggcgccggcgacggcggcc 113 |||||||||||||||||||| Sbjct: 153185 cggcgccggcgacggcggcc 153166
>emb|AL731759.2|CNS07YPA Oryza sativa chromosome 12, . BAC OSJNBa0009K11 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144596 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 cggcgccggcgacggcggcc 113 |||||||||||||||||||| Sbjct: 7672 cggcgccggcgacggcggcc 7653
>emb|CT030250.3| Mouse DNA sequence from clone RP23-285E4 on chromosome 12, complete sequence Length = 177784 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 atccttcctgcgggagatgg 420 |||||||||||||||||||| Sbjct: 93956 atccttcctgcgggagatgg 93975
>emb|AL513356.8| Mouse DNA sequence from clone RP23-193O17 on chromosome X, complete sequence Length = 216238 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 gtgttcaaggccaacctccg 283 |||||||||||||||||||| Sbjct: 75208 gtgttcaaggccaacctccg 75189 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,635,817 Number of Sequences: 3902068 Number of extensions: 2635817 Number of successful extensions: 73913 Number of sequences better than 10.0: 109 Number of HSP's better than 10.0 without gapping: 120 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 70159 Number of HSP's gapped (non-prelim): 3755 length of query: 442 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 420 effective length of database: 17,147,199,772 effective search space: 7201823904240 effective search space used: 7201823904240 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
