>ADRB1_CANFA (P79148) Beta-1 adrenergic receptor (Beta-1 adrenoceptor) (Beta-1|
           adrenoreceptor)
          Length = 473

 Score = 33.5 bits (75), Expect = 0.21
 Identities = 19/39 (48%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
 Frame = -3

Query: 239 RGTHRRTGKPP---PPPSTCLRRETDDPD-DDASAALGA 135
           RG+H   G PP   PPPS     + DD D DDA A  GA
Sbjct: 396 RGSHGAAGDPPRARPPPSPGAASDDDDDDEDDAGAGAGA 434

>UL51_PRVKA (Q85227) Protein UL51|
          Length = 236

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = -3

Query: 239 RGTHRRTGKPPPPPSTCLRRETDDPDDDASAAL 141
           R T  R   PPPP       E D P+DDA+  L
Sbjct: 181 RATAARPAPPPPPEEAGEDEEGDRPEDDAAPLL 213

>IF4B_YEAST (P34167) Eukaryotic translation initiation factor 4B (eIF-4B)|
          Length = 436

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = -3

Query: 239 RGTHRRTGKPPPPPSTCLRRETDDPDDDASAALGANLE 126
           RG++ ++   PP      RRE ++PD D SAA G+N +
Sbjct: 292 RGSNFQSSSRPP------RREREEPDIDWSAARGSNFQ 323

>ZN499_HUMAN (Q96K62) Zinc finger protein 499|
          Length = 511

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 14/66 (21%)
 Frame = -1

Query: 259 PLGPPRSGEPTVGLESLRHRRRHVCAAKP--------------TIRTMMPAPPSEQISNG 122
           P   P    P +    LRHR RH+ AA+P                R  +PAPP+   + G
Sbjct: 133 PTPLPTPVPPPLAPAQLRHRLRHLLAARPPGHPGAAHSRKQRQPARLQLPAPPTPAKAEG 192

Query: 121 RWICPS 104
               PS
Sbjct: 193 PDADPS 198

>TOM1_MOUSE (O88746) Target of Myb protein 1|
          Length = 492

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -3

Query: 218 GKPPPPPSTCLRRETDDPDDDASAAL 141
           G P P P T  RR+T + DDD   AL
Sbjct: 467 GPPRPSPGTAPRRKTQEKDDDMLFAL 492

>GAG_JSRV (P31622) Gag polyprotein [Contains: Core protein p10; Core protein|
           p18; Core protein p12; Core protein p27; Core protein
           p14; Core protein p4]
          Length = 612

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -3

Query: 212 PPPPPSTCLRRETDDPDDDASAALGANLEWE 120
           PPPPP   L+    D DD  S+   A L+ E
Sbjct: 121 PPPPPPPSLKMHPSDNDDSLSSTDEAELDEE 151

>TRI37_MOUSE (Q6PCX9) Tripartite motif protein 37|
          Length = 961

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -1

Query: 271 EQRVPLGPPRSGEPTVGLESLRHRRRHVCAA 179
           E     GPP S    VG  S   RR H+C+A
Sbjct: 577 EDAAAAGPPGSSHSYVGASSRMSRRTHLCSA 607

>ZFNL2_ORYSA (Q5JLB5) Zinc finger CCCH type domain-containing protein ZFN-like 2|
          Length = 439

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = -3

Query: 212 PPPPPST--CLRRETDDPDDDASAALGANLEWEMDLS 108
           PPPPPS        TD+P  D +A  G  +  +M +S
Sbjct: 31  PPPPPSQLPATAAATDEPSHDPAALYGEGMWQQMTMS 67

>YMU5_STRCM (Q05071) Hypothetical 25.0 kDa protein in mutA 5'region (ORF-D)|
          Length = 237

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 15/39 (38%), Positives = 17/39 (43%)
 Frame = -3

Query: 230 HRRTGKPPPPPSTCLRRETDDPDDDASAALGANLEWEMD 114
           HR   +PP PP     R     D  A AAL A+  W  D
Sbjct: 106 HREPVEPPRPPRGVTVRRLTPTDAPALAALSADSSWIYD 144


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,220,733
Number of Sequences: 219361
Number of extensions: 744935
Number of successful extensions: 3431
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3394
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)