ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart58f02 |
|---|---|
| Clone Library Name | barley_pub |
>GRP2_NICSY (P27484) Glycine-rich protein 2| Length = 214 Score = 113 bits (282), Expect = 2e-25 Identities = 52/78 (66%), Positives = 62/78 (79%) Frame = +2 Query: 65 GARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDG 244 G R KGTVKWF+ KGFGFI+P+DG EDLFVHQS I+S+G+RSL E + VEF+V +G DG Sbjct: 6 GQRAKGTVKWFSDQKGFGFITPDDGGEDLFVHQSGIRSEGFRSLAEGETVEFEVESGGDG 65 Query: 245 RTKASDVTAPGGGALSGG 298 RTKA DVT P G A+ GG Sbjct: 66 RTKAVDVTGPDGAAVQGG 83
>GRP2B_ARATH (Q38896) Glycine-rich protein 2b (AtGRP2b)| Length = 201 Score = 97.1 bits (240), Expect = 2e-20 Identities = 45/79 (56%), Positives = 57/79 (72%) Frame = +2 Query: 65 GARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDG 244 G R KGTVKWF+ KGFGFI+P DG +DLFVHQS+I+S+G+RSL + VEFDV + G Sbjct: 12 GDRRKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEGFRSLAAEESVEFDVEVDNSG 71 Query: 245 RTKASDVTAPGGGALSGGS 301 R KA +V+ P G + G S Sbjct: 72 RPKAIEVSGPDGAPVQGNS 90
>CSPE_BUCBP (Q89A90) Cold shock-like protein cspE (CSP-E)| Length = 68 Score = 82.4 bits (202), Expect = 4e-16 Identities = 35/67 (52%), Positives = 54/67 (80%) Frame = +2 Query: 68 ARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGR 247 +++KG VKWFN +KGFGFI+PEDGS+D+FVH SAI+S+G+++L+E VEF++ G G Sbjct: 1 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNGFKTLSEGQSVEFEITEGAKGP 60 Query: 248 TKASDVT 268 + A+ ++ Sbjct: 61 SAANVIS 67
>YBX2B_XENLA (P45441) Y-box-binding protein 2-B (Cytoplasmic RNA-binding protein| p54) (mRNP3) Length = 324 Score = 82.0 bits (201), Expect = 6e-16 Identities = 39/88 (44%), Positives = 59/88 (67%), Gaps = 4/88 (4%) Frame = +2 Query: 44 RFRRRKMGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDG----YRSLNENDV 211 + ++ + +V+GTVKWFNV G+GFI+ D ED+FVHQ+AIK + RS+ + + Sbjct: 32 QINKKLLATQVQGTVKWFNVRNGYGFINRNDSKEDVFVHQTAIKKNNPRKFLRSVGDGET 91 Query: 212 VEFDVITGDDGRTKASDVTAPGGGALSG 295 VEFDV+ G+ G +A++VT PGG + G Sbjct: 92 VEFDVVEGEKG-AEAANVTGPGGVPVKG 118
>CSPE_BUCAP (P63238) Cold shock-like protein cspE (CSP-E)| Length = 68 Score = 81.3 bits (199), Expect = 9e-16 Identities = 35/67 (52%), Positives = 53/67 (79%) Frame = +2 Query: 68 ARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGR 247 +++KG VKWFN +KGFGFI+PEDGS+D+FVH SAI+S+G+++L E VEF++ G G Sbjct: 1 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNGFKTLAEGQSVEFEITEGAKGP 60 Query: 248 TKASDVT 268 + A+ ++ Sbjct: 61 SAANVIS 67
>CSPE_BUCAI (P63237) Cold shock-like protein cspE (CSP-E)| Length = 68 Score = 81.3 bits (199), Expect = 9e-16 Identities = 35/67 (52%), Positives = 53/67 (79%) Frame = +2 Query: 68 ARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGR 247 +++KG VKWFN +KGFGFI+PEDGS+D+FVH SAI+S+G+++L E VEF++ G G Sbjct: 1 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNGFKTLAEGQSVEFEITEGAKGP 60 Query: 248 TKASDVT 268 + A+ ++ Sbjct: 61 SAANVIS 67
>YBOX1_RABIT (Q28618) Nuclease sensitive element-binding protein 1| (Y-box-binding protein 1) (Y-box transcription factor) (YB-1) (CCAAT-binding transcription factor I subunit A) (CBF-A) (Enhancer factor I subunit A) (EFI-A) (p50) Length = 323 Score = 81.3 bits (199), Expect = 9e-16 Identities = 40/91 (43%), Positives = 59/91 (64%), Gaps = 4/91 (4%) Frame = +2 Query: 53 RRKMGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDG----YRSLNENDVVEF 220 ++ + +V GTVKWFNV G+GFI+ D ED+FVHQ+AIK + RS+ + + VEF Sbjct: 51 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEF 110 Query: 221 DVITGDDGRTKASDVTAPGGGALSGGSRPSD 313 DV+ G+ G +A++VT PGG + G +D Sbjct: 111 DVVEGEKG-AEAANVTGPGGVPVQGSKYAAD 140
>YBOX1_HUMAN (P67809) Nuclease sensitive element-binding protein 1| (Y-box-binding protein 1) (Y-box transcription factor) (YB-1) (CCAAT-binding transcription factor I subunit A) (CBF-A) (Enhancer factor I subunit A) (EFI-A) (DNA-binding protein B) (DBPB) Length = 323 Score = 81.3 bits (199), Expect = 9e-16 Identities = 40/91 (43%), Positives = 59/91 (64%), Gaps = 4/91 (4%) Frame = +2 Query: 53 RRKMGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDG----YRSLNENDVVEF 220 ++ + +V GTVKWFNV G+GFI+ D ED+FVHQ+AIK + RS+ + + VEF Sbjct: 51 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEF 110 Query: 221 DVITGDDGRTKASDVTAPGGGALSGGSRPSD 313 DV+ G+ G +A++VT PGG + G +D Sbjct: 111 DVVEGEKG-AEAANVTGPGGVPVQGSKYAAD 140
>YBOX1_BOVIN (P67808) Nuclease sensitive element-binding protein 1| (Y-box-binding protein 1) (Y-box transcription factor) (YB-1) (CCAAT-binding transcription factor I subunit A) (CBF-A) (Enhancer factor I subunit A) (EFI-A) (DNA-binding protein B) (DBPB) Length = 323 Score = 81.3 bits (199), Expect = 9e-16 Identities = 40/91 (43%), Positives = 59/91 (64%), Gaps = 4/91 (4%) Frame = +2 Query: 53 RRKMGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDG----YRSLNENDVVEF 220 ++ + +V GTVKWFNV G+GFI+ D ED+FVHQ+AIK + RS+ + + VEF Sbjct: 51 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEF 110 Query: 221 DVITGDDGRTKASDVTAPGGGALSGGSRPSD 313 DV+ G+ G +A++VT PGG + G +D Sbjct: 111 DVVEGEKG-AEAANVTGPGGVPVQGSKYAAD 140
>YBOX1_RAT (P62961) Nuclease sensitive element-binding protein 1| (Y-box-binding protein 1) (Y-box transcription factor) (YB-1) (CCAAT-binding transcription factor I subunit A) (CBF-A) (Enhancer factor I subunit A) (EFI-A) (DNA-binding protein B) (DBPB) Length = 321 Score = 81.3 bits (199), Expect = 9e-16 Identities = 40/91 (43%), Positives = 59/91 (64%), Gaps = 4/91 (4%) Frame = +2 Query: 53 RRKMGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDG----YRSLNENDVVEF 220 ++ + +V GTVKWFNV G+GFI+ D ED+FVHQ+AIK + RS+ + + VEF Sbjct: 49 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEF 108 Query: 221 DVITGDDGRTKASDVTAPGGGALSGGSRPSD 313 DV+ G+ G +A++VT PGG + G +D Sbjct: 109 DVVEGEKG-AEAANVTGPGGVPVQGSKYAAD 138
>YBOX1_MOUSE (P62960) Nuclease sensitive element-binding protein 1| (Y-box-binding protein 1) (Y-box transcription factor) (YB-1) (CCAAT-binding transcription factor I subunit A) (CBF-A) (Enhancer factor I subunit A) (EFI-A) (DNA-binding protein B) (DBPB) Length = 321 Score = 81.3 bits (199), Expect = 9e-16 Identities = 40/91 (43%), Positives = 59/91 (64%), Gaps = 4/91 (4%) Frame = +2 Query: 53 RRKMGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDG----YRSLNENDVVEF 220 ++ + +V GTVKWFNV G+GFI+ D ED+FVHQ+AIK + RS+ + + VEF Sbjct: 49 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEF 108 Query: 221 DVITGDDGRTKASDVTAPGGGALSGGSRPSD 313 DV+ G+ G +A++VT PGG + G +D Sbjct: 109 DVVEGEKG-AEAANVTGPGGVPVQGSKYAAD 138
>YBOX1_CHICK (Q06066) Nuclease sensitive element-binding protein 1 (Y-box| binding protein 1) (Y-box transcription factor) Length = 321 Score = 81.3 bits (199), Expect = 9e-16 Identities = 40/91 (43%), Positives = 59/91 (64%), Gaps = 4/91 (4%) Frame = +2 Query: 53 RRKMGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDG----YRSLNENDVVEF 220 ++ + +V GTVKWFNV G+GFI+ D ED+FVHQ+AIK + RS+ + + VEF Sbjct: 49 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEF 108 Query: 221 DVITGDDGRTKASDVTAPGGGALSGGSRPSD 313 DV+ G+ G +A++VT PGG + G +D Sbjct: 109 DVVEGEKG-AEAANVTGPGGVPVQGSKYAAD 138
>YBX2A_XENLA (P21574) Y-box-binding protein 2-A (Cytoplasmic RNA-binding protein| p56) (mRNP4) Length = 336 Score = 80.9 bits (198), Expect = 1e-15 Identities = 39/85 (45%), Positives = 58/85 (68%), Gaps = 4/85 (4%) Frame = +2 Query: 53 RRKMGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDG----YRSLNENDVVEF 220 ++ + +V+GTVKWFNV G+GFI+ D ED+FVHQ+AIK + RS+ + + VEF Sbjct: 35 KKVLATQVQGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKFLRSVGDGETVEF 94 Query: 221 DVITGDDGRTKASDVTAPGGGALSG 295 DV+ G+ G +A++VT PGG + G Sbjct: 95 DVVEGEKG-AEAANVTGPGGVPVKG 118
>CSPG_SHIFL (P0A981) Cold shock-like protein cspG (CPS-G)| Length = 70 Score = 80.1 bits (196), Expect = 2e-15 Identities = 37/69 (53%), Positives = 50/69 (72%) Frame = +2 Query: 62 MGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDD 241 M ++ G VKWFN KGFGFI+P+DGS+D+FVH +AI+S+ +R+LNEN VEF + G Sbjct: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 Query: 242 GRTKASDVT 268 G A+ VT Sbjct: 61 GPAAANVVT 69
>CSPG_ECOLI (P0A978) Cold shock-like protein cspG (CPS-G)| Length = 70 Score = 80.1 bits (196), Expect = 2e-15 Identities = 37/69 (53%), Positives = 50/69 (72%) Frame = +2 Query: 62 MGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDD 241 M ++ G VKWFN KGFGFI+P+DGS+D+FVH +AI+S+ +R+LNEN VEF + G Sbjct: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 Query: 242 GRTKASDVT 268 G A+ VT Sbjct: 61 GPAAANVVT 69
>CSPG_ECOL6 (P0A979) Cold shock-like protein cspG (CPS-G)| Length = 70 Score = 80.1 bits (196), Expect = 2e-15 Identities = 37/69 (53%), Positives = 50/69 (72%) Frame = +2 Query: 62 MGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDD 241 M ++ G VKWFN KGFGFI+P+DGS+D+FVH +AI+S+ +R+LNEN VEF + G Sbjct: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 Query: 242 GRTKASDVT 268 G A+ VT Sbjct: 61 GPAAANVVT 69
>CSPG_ECO57 (P0A980) Cold shock-like protein cspG (CPS-G)| Length = 70 Score = 80.1 bits (196), Expect = 2e-15 Identities = 37/69 (53%), Positives = 50/69 (72%) Frame = +2 Query: 62 MGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDD 241 M ++ G VKWFN KGFGFI+P+DGS+D+FVH +AI+S+ +R+LNEN VEF + G Sbjct: 1 MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQR 60 Query: 242 GRTKASDVT 268 G A+ VT Sbjct: 61 GPAAANVVT 69
>CSPE_SHIFL (P0A975) Cold shock-like protein cspE (CSP-E)| Length = 68 Score = 79.7 bits (195), Expect = 3e-15 Identities = 34/64 (53%), Positives = 51/64 (79%) Frame = +2 Query: 68 ARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGR 247 +++KG VKWFN +KGFGFI+PEDGS+D+FVH SAI+++G+++L E VEF++ G G Sbjct: 1 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 60 Query: 248 TKAS 259 + A+ Sbjct: 61 SAAN 64
>CSPE_ECOLI (P0A972) Cold shock-like protein cspE (CSP-E)| Length = 68 Score = 79.7 bits (195), Expect = 3e-15 Identities = 34/64 (53%), Positives = 51/64 (79%) Frame = +2 Query: 68 ARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGR 247 +++KG VKWFN +KGFGFI+PEDGS+D+FVH SAI+++G+++L E VEF++ G G Sbjct: 1 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 60 Query: 248 TKAS 259 + A+ Sbjct: 61 SAAN 64
>CSPE_ECOL6 (P0A973) Cold shock-like protein cspE (CSP-E)| Length = 68 Score = 79.7 bits (195), Expect = 3e-15 Identities = 34/64 (53%), Positives = 51/64 (79%) Frame = +2 Query: 68 ARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGR 247 +++KG VKWFN +KGFGFI+PEDGS+D+FVH SAI+++G+++L E VEF++ G G Sbjct: 1 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 60 Query: 248 TKAS 259 + A+ Sbjct: 61 SAAN 64
>CSPE_ECO57 (P0A974) Cold shock-like protein cspE (CSP-E)| Length = 68 Score = 79.7 bits (195), Expect = 3e-15 Identities = 34/64 (53%), Positives = 51/64 (79%) Frame = +2 Query: 68 ARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGR 247 +++KG VKWFN +KGFGFI+PEDGS+D+FVH SAI+++G+++L E VEF++ G G Sbjct: 1 SKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGP 60 Query: 248 TKAS 259 + A+ Sbjct: 61 SAAN 64
>DBPA_XENLA (Q5PQD5) DNA-binding protein A (Cold shock domain-containing| protein A) Length = 361 Score = 78.6 bits (192), Expect = 6e-15 Identities = 39/91 (42%), Positives = 58/91 (63%), Gaps = 4/91 (4%) Frame = +2 Query: 53 RRKMGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDG----YRSLNENDVVEF 220 ++ + +V GTVKWFNV G+GFI+ D ED+FVHQ+AIK + RS+ + + VEF Sbjct: 76 KKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEF 135 Query: 221 DVITGDDGRTKASDVTAPGGGALSGGSRPSD 313 DV+ G+ G +A++VT P G + G +D Sbjct: 136 DVVEGEKG-AEAANVTGPDGVPVEGSRYAAD 165
>DBPA_RAT (Q62764) DNA-binding protein A (Cold shock domain-containing| protein A) (Muscle Y-box protein YB2) (Y-box-binding protein-A) (RYB-A) Length = 361 Score = 78.6 bits (192), Expect = 6e-15 Identities = 39/91 (42%), Positives = 58/91 (63%), Gaps = 4/91 (4%) Frame = +2 Query: 53 RRKMGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDG----YRSLNENDVVEF 220 ++ + +V GTVKWFNV G+GFI+ D ED+FVHQ+AIK + RS+ + + VEF Sbjct: 76 KKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEF 135 Query: 221 DVITGDDGRTKASDVTAPGGGALSGGSRPSD 313 DV+ G+ G +A++VT P G + G +D Sbjct: 136 DVVEGEKG-AEAANVTGPDGVPVEGSRYAAD 165
>DBPA_MOUSE (Q9JKB3) DNA-binding protein A (Cold shock domain-containing| protein A) (Y-box protein 3) Length = 361 Score = 78.6 bits (192), Expect = 6e-15 Identities = 39/91 (42%), Positives = 58/91 (63%), Gaps = 4/91 (4%) Frame = +2 Query: 53 RRKMGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDG----YRSLNENDVVEF 220 ++ + +V GTVKWFNV G+GFI+ D ED+FVHQ+AIK + RS+ + + VEF Sbjct: 76 KKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEF 135 Query: 221 DVITGDDGRTKASDVTAPGGGALSGGSRPSD 313 DV+ G+ G +A++VT P G + G +D Sbjct: 136 DVVEGEKG-AEAANVTGPDGVPVEGSRYAAD 165
>DBPA_HUMAN (P16989) DNA-binding protein A (Cold shock domain-containing| protein A) (Single-strand DNA-binding protein NF-GMB) Length = 372 Score = 78.6 bits (192), Expect = 6e-15 Identities = 39/91 (42%), Positives = 58/91 (63%), Gaps = 4/91 (4%) Frame = +2 Query: 53 RRKMGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDG----YRSLNENDVVEF 220 ++ + +V GTVKWFNV G+GFI+ D ED+FVHQ+AIK + RS+ + + VEF Sbjct: 84 KKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEF 143 Query: 221 DVITGDDGRTKASDVTAPGGGALSGGSRPSD 313 DV+ G+ G +A++VT P G + G +D Sbjct: 144 DVVEGEKG-AEAANVTGPDGVPVEGSRYAAD 173
>YBOX2_MOUSE (Q9Z2C8) Y-box-binding protein 2 (Germ cell-specific Y-box-binding| protein) (FRGY2 homolog) Length = 360 Score = 78.6 bits (192), Expect = 6e-15 Identities = 39/82 (47%), Positives = 55/82 (67%), Gaps = 4/82 (4%) Frame = +2 Query: 62 MGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDG----YRSLNENDVVEFDVI 229 + +V GTVKWFNV G+GFI+ D ED+FVHQ+AIK + RS+ + + VEFDV+ Sbjct: 92 LAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVV 151 Query: 230 TGDDGRTKASDVTAPGGGALSG 295 G+ G +A++VT PGG + G Sbjct: 152 EGEKG-ARAANVTGPGGVPVKG 172
>CSPJ_SALTY (P39818) Cold shock-like protein cspJ| Length = 70 Score = 78.2 bits (191), Expect = 8e-15 Identities = 36/61 (59%), Positives = 46/61 (75%) Frame = +2 Query: 62 MGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDD 241 M ++ G VKWFN KGFGFI+P+DGS+D+FVH SAI+S+ +R+LNEN VEF V G Sbjct: 1 MTTKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNEFRTLNENQEVEFSVEQGPK 60 Query: 242 G 244 G Sbjct: 61 G 61
>YBOX1_XENLA (P21573) Nuclease sensitive element-binding protein 1 (Y-box| binding protein 1) (Y-box transcription factor) Length = 303 Score = 78.2 bits (191), Expect = 8e-15 Identities = 39/91 (42%), Positives = 58/91 (63%), Gaps = 4/91 (4%) Frame = +2 Query: 53 RRKMGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDG----YRSLNENDVVEF 220 ++ + +V GTVKWFNV G+GFI+ D ED+FVHQ+AIK + RS+ + + VEF Sbjct: 30 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEF 89 Query: 221 DVITGDDGRTKASDVTAPGGGALSGGSRPSD 313 DV+ G+ G +A++VT P G + G +D Sbjct: 90 DVVEGEKG-AEAANVTGPEGVPVQGSKYAAD 119
>YB3_XENLA (Q00436) B box-binding protein (Protein YB3)| Length = 305 Score = 78.2 bits (191), Expect = 8e-15 Identities = 39/91 (42%), Positives = 58/91 (63%), Gaps = 4/91 (4%) Frame = +2 Query: 53 RRKMGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDG----YRSLNENDVVEF 220 ++ + +V GTVKWFNV G+GFI+ D ED+FVHQ+AIK + RS+ + + VEF Sbjct: 30 KKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEF 89 Query: 221 DVITGDDGRTKASDVTAPGGGALSGGSRPSD 313 DV+ G+ G +A++VT PG + G +D Sbjct: 90 DVVEGEKG-AEAANVTGPGPVPVQGSKYAAD 119
>YBOX2_HUMAN (Q9Y2T7) Y-box-binding protein 2 (Germ cell-specific Y-box-binding| protein) (Contrin) (MSY2 homolog) Length = 364 Score = 78.2 bits (191), Expect = 8e-15 Identities = 39/82 (47%), Positives = 55/82 (67%), Gaps = 4/82 (4%) Frame = +2 Query: 62 MGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDG----YRSLNENDVVEFDVI 229 + +V GTVKWFNV G+GFI+ D ED+FVHQ+AIK + RS+ + + VEFDV+ Sbjct: 90 LAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVV 149 Query: 230 TGDDGRTKASDVTAPGGGALSG 295 G+ G +A++VT PGG + G Sbjct: 150 EGEKG-AEATNVTGPGGVPVKG 170
>CSPC_SALTY (P0A9Y9) Cold shock-like protein cspC (CSP-C)| Length = 68 Score = 77.0 bits (188), Expect = 2e-14 Identities = 37/68 (54%), Positives = 51/68 (75%) Frame = +2 Query: 68 ARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGR 247 A++KG VKWFN +KGFGFI+P DGS+D+FVH SAI+ +G+++L E VEF++ G G Sbjct: 1 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG- 59 Query: 248 TKASDVTA 271 A +VTA Sbjct: 60 PAAVNVTA 67
>CSPC_SALTI (P0A9Z0) Cold shock-like protein cspC (CSP-C)| Length = 68 Score = 77.0 bits (188), Expect = 2e-14 Identities = 37/68 (54%), Positives = 51/68 (75%) Frame = +2 Query: 68 ARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGR 247 A++KG VKWFN +KGFGFI+P DGS+D+FVH SAI+ +G+++L E VEF++ G G Sbjct: 1 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG- 59 Query: 248 TKASDVTA 271 A +VTA Sbjct: 60 PAAVNVTA 67
>CSPC_ECOLI (P0A9Y6) Cold shock-like protein cspC (CSP-C)| Length = 68 Score = 77.0 bits (188), Expect = 2e-14 Identities = 37/68 (54%), Positives = 51/68 (75%) Frame = +2 Query: 68 ARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGR 247 A++KG VKWFN +KGFGFI+P DGS+D+FVH SAI+ +G+++L E VEF++ G G Sbjct: 1 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG- 59 Query: 248 TKASDVTA 271 A +VTA Sbjct: 60 PAAVNVTA 67
>CSPC_ECOL6 (P0A9Y7) Cold shock-like protein cspC (CSP-C)| Length = 68 Score = 77.0 bits (188), Expect = 2e-14 Identities = 37/68 (54%), Positives = 51/68 (75%) Frame = +2 Query: 68 ARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGR 247 A++KG VKWFN +KGFGFI+P DGS+D+FVH SAI+ +G+++L E VEF++ G G Sbjct: 1 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG- 59 Query: 248 TKASDVTA 271 A +VTA Sbjct: 60 PAAVNVTA 67
>CSPC_ECO57 (P0A9Y8) Cold shock-like protein cspC (CSP-C)| Length = 68 Score = 77.0 bits (188), Expect = 2e-14 Identities = 37/68 (54%), Positives = 51/68 (75%) Frame = +2 Query: 68 ARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGR 247 A++KG VKWFN +KGFGFI+P DGS+D+FVH SAI+ +G+++L E VEF++ G G Sbjct: 1 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKG- 59 Query: 248 TKASDVTA 271 A +VTA Sbjct: 60 PAAVNVTA 67
>CSPJ_SALTI (P58726) Cold shock-like protein cspJ| Length = 70 Score = 76.6 bits (187), Expect = 2e-14 Identities = 35/61 (57%), Positives = 45/61 (73%) Frame = +2 Query: 62 MGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDD 241 M ++ G VKWFN KGFGFI+P+DGS+D+FVH SAI+S+ +R+LNEN VEF G Sbjct: 1 MTTKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNEFRTLNENQEVEFSAEQGPK 60 Query: 242 G 244 G Sbjct: 61 G 61
>CSPA_SHIFL (P0A9Y4) Cold shock protein cspA (CSP-A) (7.4 kDa cold shock| protein) (CS7.4) Length = 69 Score = 76.6 bits (187), Expect = 2e-14 Identities = 36/67 (53%), Positives = 50/67 (74%) Frame = +2 Query: 71 RVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGRT 250 ++ G VKWFN KGFGFI+P+DGS+D+FVH SAI++DGY+SL+E V F + +G G Sbjct: 3 KMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESGAKG-P 61 Query: 251 KASDVTA 271 A +VT+ Sbjct: 62 AAGNVTS 68
>CSPA_SALTY (P0A9Y2) Cold shock protein cspA (CSP-A) (7.4 kDa cold shock| protein) (CS7.4) Length = 69 Score = 76.6 bits (187), Expect = 2e-14 Identities = 36/67 (53%), Positives = 50/67 (74%) Frame = +2 Query: 71 RVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGRT 250 ++ G VKWFN KGFGFI+P+DGS+D+FVH SAI++DGY+SL+E V F + +G G Sbjct: 3 KMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESGAKG-P 61 Query: 251 KASDVTA 271 A +VT+ Sbjct: 62 AAGNVTS 68
>CSPA_SALTI (P0A9Y3) Cold shock protein cspA (CSP-A) (7.4 kDa cold shock| protein) (CS7.4) Length = 69 Score = 76.6 bits (187), Expect = 2e-14 Identities = 36/67 (53%), Positives = 50/67 (74%) Frame = +2 Query: 71 RVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGRT 250 ++ G VKWFN KGFGFI+P+DGS+D+FVH SAI++DGY+SL+E V F + +G G Sbjct: 3 KMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESGAKG-P 61 Query: 251 KASDVTA 271 A +VT+ Sbjct: 62 AAGNVTS 68
>CSPA_SALEN (P0A9Y5) Cold shock protein cspA (CSP-A) (7.4 kDa cold shock| protein) (CS7.4) Length = 69 Score = 76.6 bits (187), Expect = 2e-14 Identities = 36/67 (53%), Positives = 50/67 (74%) Frame = +2 Query: 71 RVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGRT 250 ++ G VKWFN KGFGFI+P+DGS+D+FVH SAI++DGY+SL+E V F + +G G Sbjct: 3 KMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESGAKG-P 61 Query: 251 KASDVTA 271 A +VT+ Sbjct: 62 AAGNVTS 68
>CSPA_ECOLI (P0A9X9) Cold shock protein cspA (CSP-A) (7.4 kDa cold shock| protein) (CS7.4) Length = 69 Score = 76.6 bits (187), Expect = 2e-14 Identities = 36/67 (53%), Positives = 50/67 (74%) Frame = +2 Query: 71 RVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGRT 250 ++ G VKWFN KGFGFI+P+DGS+D+FVH SAI++DGY+SL+E V F + +G G Sbjct: 3 KMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESGAKG-P 61 Query: 251 KASDVTA 271 A +VT+ Sbjct: 62 AAGNVTS 68
>CSPA_ECOL6 (P0A9Y0) Cold shock protein cspA (CSP-A) (7.4 kDa cold shock| protein) (CS7.4) Length = 69 Score = 76.6 bits (187), Expect = 2e-14 Identities = 36/67 (53%), Positives = 50/67 (74%) Frame = +2 Query: 71 RVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGRT 250 ++ G VKWFN KGFGFI+P+DGS+D+FVH SAI++DGY+SL+E V F + +G G Sbjct: 3 KMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESGAKG-P 61 Query: 251 KASDVTA 271 A +VT+ Sbjct: 62 AAGNVTS 68
>CSPA_ECO57 (P0A9Y1) Cold shock protein cspA (CSP-A) (7.4 kDa cold shock| protein) (CS7.4) Length = 69 Score = 76.6 bits (187), Expect = 2e-14 Identities = 36/67 (53%), Positives = 50/67 (74%) Frame = +2 Query: 71 RVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGRT 250 ++ G VKWFN KGFGFI+P+DGS+D+FVH SAI++DGY+SL+E V F + +G G Sbjct: 3 KMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESGAKG-P 61 Query: 251 KASDVTA 271 A +VT+ Sbjct: 62 AAGNVTS 68
>YBOXH_APLCA (P41824) Y-box factor homolog (APY1)| Length = 253 Score = 76.6 bits (187), Expect = 2e-14 Identities = 38/91 (41%), Positives = 59/91 (64%), Gaps = 4/91 (4%) Frame = +2 Query: 53 RRKMGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDG----YRSLNENDVVEF 220 ++ + ++V GTVKWFNV G+GFI+ +D ED+FVHQ+AI + RS+ + + VEF Sbjct: 26 KKIIASQVSGTVKWFNVKSGYGFINRDDTKEDVFVHQTAIVKNNPRKYLRSVGDGEKVEF 85 Query: 221 DVITGDDGRTKASDVTAPGGGALSGGSRPSD 313 DV+ G+ G +A++VT P G + G +D Sbjct: 86 DVVEGEKG-NEAANVTGPEGSNVQGSKYAAD 115
>CSPC_BUCAI (P57407) Cold shock-like protein cspC (CSP-C)| Length = 68 Score = 76.3 bits (186), Expect = 3e-14 Identities = 32/59 (54%), Positives = 46/59 (77%) Frame = +2 Query: 68 ARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDG 244 A++KG VKWFN +KGFGFI+P DGS+D+FVH S+I+ +G+++L E VEF++ G G Sbjct: 1 AKIKGQVKWFNESKGFGFITPSDGSKDVFVHFSSIQGNGFKTLTEGQNVEFEIQDGQKG 59
>CSPA_MICLU (O30875) Major cold shock protein| Length = 67 Score = 75.9 bits (185), Expect = 4e-14 Identities = 36/63 (57%), Positives = 47/63 (74%) Frame = +2 Query: 80 GTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGRTKAS 259 GTVKWFN KG+GFI+PED S D+FVH SAI+ +G++ L END VEF+ G G +A+ Sbjct: 4 GTVKWFNAEKGYGFIAPEDNSADVFVHFSAIQGNGFKELQENDRVEFETQDGPKG-LQAA 62 Query: 260 DVT 268 +VT Sbjct: 63 NVT 65
>CSPC_SHIFL (Q83RI9) Cold shock-like protein cspC (CSP-C)| Length = 68 Score = 75.5 bits (184), Expect = 5e-14 Identities = 37/68 (54%), Positives = 50/68 (73%) Frame = +2 Query: 68 ARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGR 247 A++KG VKWFN +KGFGFI+P DGS+D+FVH SAI+ +G ++L E VEF++ G G Sbjct: 1 AKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGLKTLAEGQNVEFEIQDGQKG- 59 Query: 248 TKASDVTA 271 A +VTA Sbjct: 60 PAAVNVTA 67
>CSPD_SHIFL (P0A971) Cold shock-like protein cspD (CSP-D)| Length = 74 Score = 74.7 bits (182), Expect = 9e-14 Identities = 34/56 (60%), Positives = 38/56 (67%) Frame = +2 Query: 77 KGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDG 244 KGTVKWFN KGFGFI PE G ED+F H S I+ DGYR+L V+FDV G G Sbjct: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKG 58
>CSPD_ECOLI (P0A968) Cold shock-like protein cspD (CSP-D)| Length = 74 Score = 74.7 bits (182), Expect = 9e-14 Identities = 34/56 (60%), Positives = 38/56 (67%) Frame = +2 Query: 77 KGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDG 244 KGTVKWFN KGFGFI PE G ED+F H S I+ DGYR+L V+FDV G G Sbjct: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKG 58
>CSPD_ECOL6 (P0A969) Cold shock-like protein cspD (CSP-D)| Length = 74 Score = 74.7 bits (182), Expect = 9e-14 Identities = 34/56 (60%), Positives = 38/56 (67%) Frame = +2 Query: 77 KGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDG 244 KGTVKWFN KGFGFI PE G ED+F H S I+ DGYR+L V+FDV G G Sbjct: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKG 58
>CSPD_ECO57 (P0A970) Cold shock-like protein cspD (CSP-D)| Length = 74 Score = 74.7 bits (182), Expect = 9e-14 Identities = 34/56 (60%), Positives = 38/56 (67%) Frame = +2 Query: 77 KGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDG 244 KGTVKWFN KGFGFI PE G ED+F H S I+ DGYR+L V+FDV G G Sbjct: 3 KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKG 58
>CSPI_ECOLI (P0A986) Cold shock-like protein cspI (CPS-I)| Length = 70 Score = 73.9 bits (180), Expect = 2e-13 Identities = 33/61 (54%), Positives = 45/61 (73%) Frame = +2 Query: 62 MGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDD 241 M ++ G VKWFN KGFGFI+P+DGS+D+FVH SAI+S+ +++L EN VEF + G Sbjct: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 Query: 242 G 244 G Sbjct: 61 G 61
>CSPI_ECOL6 (P0A987) Cold shock-like protein cspI (CPS-I)| Length = 70 Score = 73.9 bits (180), Expect = 2e-13 Identities = 33/61 (54%), Positives = 45/61 (73%) Frame = +2 Query: 62 MGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDD 241 M ++ G VKWFN KGFGFI+P+DGS+D+FVH SAI+S+ +++L EN VEF + G Sbjct: 1 MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQEVEFGIENGPK 60 Query: 242 G 244 G Sbjct: 61 G 61
>CSPB_ECOLI (P36995) Cold shock-like protein cspB (CSP-B)| Length = 71 Score = 73.9 bits (180), Expect = 2e-13 Identities = 35/66 (53%), Positives = 45/66 (68%) Frame = +2 Query: 62 MGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDD 241 M ++ G VKWFN KGFGFISP DGS+D+FVH SAI++D YR+L E V F + +G Sbjct: 1 MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAK 60 Query: 242 GRTKAS 259 G A+ Sbjct: 61 GPAAAN 66
>CSPA_MYCTU (P63848) Probable cold shock protein A| Length = 67 Score = 73.9 bits (180), Expect = 2e-13 Identities = 31/50 (62%), Positives = 40/50 (80%) Frame = +2 Query: 77 KGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDV 226 +GTVKWFN KGFGFI+PEDGS D+FVH + I+ G+R+L EN VEF++ Sbjct: 3 QGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGTGFRTLEENQKVEFEI 52
>CSPA_MYCBO (P63849) Probable cold shock protein A| Length = 67 Score = 73.9 bits (180), Expect = 2e-13 Identities = 31/50 (62%), Positives = 40/50 (80%) Frame = +2 Query: 77 KGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDV 226 +GTVKWFN KGFGFI+PEDGS D+FVH + I+ G+R+L EN VEF++ Sbjct: 3 QGTVKWFNAEKGFGFIAPEDGSADVFVHYTEIQGTGFRTLEENQKVEFEI 52
>CSPC_BACCR (P62171) Cold shock-like protein cspC| Length = 65 Score = 73.6 bits (179), Expect = 2e-13 Identities = 36/64 (56%), Positives = 45/64 (70%) Frame = +2 Query: 74 VKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGRTK 253 ++G VKWFN KGFGFI EDG +D+FVH SAI+ DGY+SL E VEFD++ G G Sbjct: 1 MQGRVKWFNAEKGFGFIEREDG-DDVFVHFSAIQQDGYKSLEEGQQVEFDIVDGARGPQA 59 Query: 254 ASDV 265 A+ V Sbjct: 60 ANVV 63
>CSPC_BACCE (P62170) Cold shock-like protein cspC| Length = 65 Score = 73.6 bits (179), Expect = 2e-13 Identities = 36/64 (56%), Positives = 45/64 (70%) Frame = +2 Query: 74 VKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGRTK 253 ++G VKWFN KGFGFI EDG +D+FVH SAI+ DGY+SL E VEFD++ G G Sbjct: 1 MQGRVKWFNAEKGFGFIEREDG-DDVFVHFSAIQQDGYKSLEEGQQVEFDIVDGARGPQA 59 Query: 254 ASDV 265 A+ V Sbjct: 60 ANVV 63
>CSPC_BACAN (P62169) Cold shock-like protein cspC| Length = 65 Score = 73.6 bits (179), Expect = 2e-13 Identities = 36/64 (56%), Positives = 45/64 (70%) Frame = +2 Query: 74 VKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGRTK 253 ++G VKWFN KGFGFI EDG +D+FVH SAI+ DGY+SL E VEFD++ G G Sbjct: 1 MQGRVKWFNAEKGFGFIEREDG-DDVFVHFSAIQQDGYKSLEEGQQVEFDIVDGARGPQA 59 Query: 254 ASDV 265 A+ V Sbjct: 60 ANVV 63
>CSP7_STRCL (Q01761) Cold shock-like protein 7.0| Length = 66 Score = 73.6 bits (179), Expect = 2e-13 Identities = 33/53 (62%), Positives = 39/53 (73%) Frame = +2 Query: 80 GTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGD 238 GTVKWFN KGFGFI+ + G D+FVH SAI + G+RSL EN VV FDV G+ Sbjct: 4 GTVKWFNAEKGFGFIAQDGGGPDVFVHYSAINATGFRSLEENQVVNFDVTHGE 56
>CAPA_PSEFR (P72188) Cold shock protein capA (Cold acclimation protein A)| (C7.0) (Fragment) Length = 64 Score = 73.2 bits (178), Expect = 3e-13 Identities = 34/61 (55%), Positives = 40/61 (65%) Frame = +2 Query: 62 MGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDD 241 M R GTVKWFN KGFGFI+P+ G +DLFVH AI+SDG++SL E V F G Sbjct: 1 MSQRQSGTVKWFNDEKGFGFITPQGGGDDLFVHFKAIESDGFKSLKEGQTVSFVAEKGQK 60 Query: 242 G 244 G Sbjct: 61 G 61
>CSPA_STIAU (P72366) Cold shock-like protein cspA| Length = 68 Score = 71.2 bits (173), Expect = 1e-12 Identities = 32/55 (58%), Positives = 38/55 (69%) Frame = +2 Query: 80 GTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDG 244 GTVKWFN KGFGFI+ + G ED+F H SAI DG+R+L E VEF+V G G Sbjct: 4 GTVKWFNDAKGFGFITQDGGGEDVFCHHSAINMDGFRTLQEGQKVEFEVTRGPKG 58
>CSPB_YERPE (P0A362) Cold shock-like protein cspB| Length = 70 Score = 70.9 bits (172), Expect = 1e-12 Identities = 32/61 (52%), Positives = 43/61 (70%) Frame = +2 Query: 62 MGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDD 241 M ++ G VKWF+ KGFGFISP DGS+D+FVH SAI+ + Y++L+E VEF + G Sbjct: 1 MSNKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGNDYKTLDEGQNVEFSIEQGQK 60 Query: 242 G 244 G Sbjct: 61 G 61
>CSPB_YEREN (P0A363) Cold shock-like protein cspB| Length = 70 Score = 70.9 bits (172), Expect = 1e-12 Identities = 32/61 (52%), Positives = 43/61 (70%) Frame = +2 Query: 62 MGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDD 241 M ++ G VKWF+ KGFGFISP DGS+D+FVH SAI+ + Y++L+E VEF + G Sbjct: 1 MSNKMTGLVKWFDAGKGFGFISPADGSKDVFVHFSAIQGNDYKTLDEGQNVEFSIEQGQK 60 Query: 242 G 244 G Sbjct: 61 G 61
>CSPA_RHIME (Q9Z3S6) Cold shock protein cspA| Length = 69 Score = 70.9 bits (172), Expect = 1e-12 Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 1/65 (1%) Frame = +2 Query: 80 GTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITG-DDGRTKA 256 GTVKWFN TKGFGFI P+DG+ D+FVH SA++ G RSL E V +D++ G++ A Sbjct: 4 GTVKWFNSTKGFGFIQPDDGATDVFVHASAVERAGMRSLVEGQKVTYDIVRDTKSGKSSA 63 Query: 257 SDVTA 271 ++ A Sbjct: 64 DNLRA 68
>CSPC_BACSU (P39158) Cold shock protein cspC| Length = 66 Score = 70.1 bits (170), Expect = 2e-12 Identities = 35/61 (57%), Positives = 44/61 (72%) Frame = +2 Query: 77 KGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGRTKA 256 +GTVKWFN KGFGFI E+G +D+FVH SAI+SDG++SL+E V FDV G G A Sbjct: 3 QGTVKWFNAEKGFGFIERENG-DDVFVHFSAIQSDGFKSLDEGQKVSFDVEQGARGAQAA 61 Query: 257 S 259 + Sbjct: 62 N 62
>CSPB_BACCE (Q45097) Cold shock-like protein cspB| Length = 65 Score = 70.1 bits (170), Expect = 2e-12 Identities = 35/62 (56%), Positives = 43/62 (69%) Frame = +2 Query: 74 VKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGRTK 253 + G VKWFN KGFGFI E GSED+FVH SAI+SDGY++L E V FD+ G+ G Sbjct: 1 MNGKVKWFNNEKGFGFIEME-GSEDVFVHFSAIQSDGYKALEEGQEVSFDITEGNRGPQA 59 Query: 254 AS 259 A+ Sbjct: 60 AN 61
>CSPA_LISMO (P0A355) Cold shock-like protein cspLA (CspL)| Length = 66 Score = 69.3 bits (168), Expect = 4e-12 Identities = 34/61 (55%), Positives = 43/61 (70%) Frame = +2 Query: 77 KGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGRTKA 256 +GTVKWFN KGFGFI E+G +D+FVH SAI+ DG++SL+E V FDV G G A Sbjct: 3 QGTVKWFNAEKGFGFIERENG-DDVFVHFSAIQGDGFKSLDEGQAVTFDVEEGQRGPQAA 61 Query: 257 S 259 + Sbjct: 62 N 62
>CSPA_LISIN (P0A356) Cold shock-like protein cspLA (CspL)| Length = 66 Score = 69.3 bits (168), Expect = 4e-12 Identities = 34/61 (55%), Positives = 43/61 (70%) Frame = +2 Query: 77 KGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGRTKA 256 +GTVKWFN KGFGFI E+G +D+FVH SAI+ DG++SL+E V FDV G G A Sbjct: 3 QGTVKWFNAEKGFGFIERENG-DDVFVHFSAIQGDGFKSLDEGQAVTFDVEEGQRGPQAA 61 Query: 257 S 259 + Sbjct: 62 N 62
>CSP_ARTGO (P54584) Cold shock protein| Length = 67 Score = 68.9 bits (167), Expect = 5e-12 Identities = 32/64 (50%), Positives = 47/64 (73%) Frame = +2 Query: 77 KGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGRTKA 256 +GTVKWFN KGFGFI+P+D D+FVH S I++ G+++L+EN V+F++ G G +A Sbjct: 3 QGTVKWFNAEKGFGFITPDDSDGDVFVHYSEIQTGGFKTLDENARVQFEIGQGAKG-PQA 61 Query: 257 SDVT 268 + VT Sbjct: 62 TGVT 65
>CSPA_VIBCH (Q9KN00) Cold shock-like protein cspA| Length = 70 Score = 68.9 bits (167), Expect = 5e-12 Identities = 34/70 (48%), Positives = 48/70 (68%) Frame = +2 Query: 62 MGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDD 241 M ++ G+VKWFN TKGFGFIS ++G +D+FVH +I S+G+++L E V F V G Sbjct: 1 MSQKMTGSVKWFNETKGFGFISQDNGGQDVFVHFKSIVSEGFKTLAEGQRVSFTVEQGKK 60 Query: 242 GRTKASDVTA 271 G +A+ VTA Sbjct: 61 G-PQAAQVTA 69
>CAPB_PSESM (P0A105) Cold shock protein capB (Cold acclimation protein B)| Length = 69 Score = 68.2 bits (165), Expect = 8e-12 Identities = 34/61 (55%), Positives = 40/61 (65%) Frame = +2 Query: 62 MGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDD 241 M R GTVKWFN KGFGFI+P+ G +DLFVH AI+SDG++SL E V F G Sbjct: 1 MSNRQTGTVKWFNDEKGFGFITPQSG-DDLFVHFKAIQSDGFKSLKEGQQVSFIATRGQK 59 Query: 242 G 244 G Sbjct: 60 G 60
>CAPB_PSEFR (P0A106) Cold shock protein capB (Cold acclimation protein B)| (C8.0) Length = 69 Score = 68.2 bits (165), Expect = 8e-12 Identities = 34/61 (55%), Positives = 40/61 (65%) Frame = +2 Query: 62 MGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDD 241 M R GTVKWFN KGFGFI+P+ G +DLFVH AI+SDG++SL E V F G Sbjct: 1 MSNRQTGTVKWFNDEKGFGFITPQSG-DDLFVHFKAIQSDGFKSLKEGQQVSFIATRGQK 59 Query: 242 G 244 G Sbjct: 60 G 60
>CSP2_LACPL (P96349) Cold shock protein 2| Length = 66 Score = 67.8 bits (164), Expect = 1e-11 Identities = 32/55 (58%), Positives = 42/55 (76%) Frame = +2 Query: 80 GTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDG 244 GTVKWFN KGFGFI+ EDG+ D+FVH SAI++DG+++L+E V +D GD G Sbjct: 4 GTVKWFNADKGFGFITGEDGT-DVFVHFSAIQTDGFKTLDEGQKVTYDEEQGDRG 57
>Y4CH_RHISN (P55390) Probable cold shock protein y4cH| Length = 69 Score = 67.4 bits (163), Expect = 1e-11 Identities = 30/65 (46%), Positives = 43/65 (66%), Gaps = 1/65 (1%) Frame = +2 Query: 80 GTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITG-DDGRTKA 256 GTVKWFN TKGFGFI P+DGS D+FVH SA++ G R L + + ++++ G+ A Sbjct: 5 GTVKWFNATKGFGFIQPDDGSADVFVHISAVERAGLRELKDGQKISYELVKDRKSGKMSA 64 Query: 257 SDVTA 271 ++ A Sbjct: 65 DNLQA 69
>CSPA_PSEAE (P95459) Major cold shock protein cspA| Length = 69 Score = 67.4 bits (163), Expect = 1e-11 Identities = 33/61 (54%), Positives = 40/61 (65%) Frame = +2 Query: 62 MGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDD 241 M R GTVKWFN KGFGFI+PE G+ DLFVH +I+ G++SL E V F V+ G Sbjct: 1 MSNRQNGTVKWFNDAKGFGFITPESGN-DLFVHFRSIQGTGFKSLQEGQKVSFVVVNGQK 59 Query: 242 G 244 G Sbjct: 60 G 60
>CSPV_VIBCH (Q9KL16) Cold shock protein cspV| Length = 70 Score = 67.0 bits (162), Expect = 2e-11 Identities = 32/70 (45%), Positives = 49/70 (70%) Frame = +2 Query: 62 MGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDD 241 M ++ G+VKWFN TKGFGF++ ++G D+FVH ++I+S+G+++L E V F V G Sbjct: 1 MSTKMTGSVKWFNETKGFGFLTQDNGGNDVFVHFNSIQSEGFKTLAEGQRVSFIVEQGKK 60 Query: 242 GRTKASDVTA 271 G +AS+V A Sbjct: 61 G-PQASNVVA 69
>CSPF_STRCO (P48859) Cold shock protein scoF| Length = 67 Score = 66.6 bits (161), Expect = 2e-11 Identities = 31/63 (49%), Positives = 39/63 (61%) Frame = +2 Query: 80 GTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGRTKAS 259 GTVKWFN KGFGFI+ + G D+F H S I + GYR L E V FD+ G G +A Sbjct: 4 GTVKWFNSEKGFGFIAQDGGGPDVFAHYSNINAQGYRELQEGQAVTFDITQGQKG-PQAE 62 Query: 260 DVT 268 ++T Sbjct: 63 NIT 65
>CSPB_LISMO (P0A357) Cold shock-like protein cspLB (CspB)| Length = 66 Score = 66.6 bits (161), Expect = 2e-11 Identities = 30/55 (54%), Positives = 41/55 (74%) Frame = +2 Query: 80 GTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDG 244 GTVKWFN KGFGFI E G +D+FVH SAI+ +G+++L+E VEF+++ G G Sbjct: 4 GTVKWFNSEKGFGFIEVE-GGDDVFVHFSAIEGEGFKTLDEGQSVEFEIVEGQRG 57
>CSPB_LISIN (P0A358) Cold shock-like protein cspLB (CspB)| Length = 66 Score = 66.6 bits (161), Expect = 2e-11 Identities = 30/55 (54%), Positives = 41/55 (74%) Frame = +2 Query: 80 GTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDG 244 GTVKWFN KGFGFI E G +D+FVH SAI+ +G+++L+E VEF+++ G G Sbjct: 4 GTVKWFNSEKGFGFIEVE-GGDDVFVHFSAIEGEGFKTLDEGQSVEFEIVEGQRG 57
>CSP1_LACPL (P71478) Cold shock protein 1| Length = 66 Score = 66.6 bits (161), Expect = 2e-11 Identities = 33/62 (53%), Positives = 44/62 (70%) Frame = +2 Query: 80 GTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGRTKAS 259 GTVKWFN KG+GFI+ EDG+ D+FVH SAI++DG+++L E V FD + D G A+ Sbjct: 4 GTVKWFNADKGYGFITGEDGN-DVFVHFSAIQTDGFKTLEEGQKVTFDEESSDRGPQAAN 62 Query: 260 DV 265 V Sbjct: 63 VV 64
>TAPB_PSEFR (P72192) Temperature acclimation protein B (E8.0) (Fragment)| Length = 63 Score = 66.2 bits (160), Expect = 3e-11 Identities = 33/61 (54%), Positives = 39/61 (63%) Frame = +2 Query: 62 MGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDD 241 M R GTVKWFN KGFGFI+PE G DLFVH AI+ +G++SL E V F + G Sbjct: 1 MSQRQSGTVKWFNDEKGFGFITPESG-PDLFVHFRAIQGNGFKSLKEGQKVTFIAVQGQK 59 Query: 242 G 244 G Sbjct: 60 G 60
>CSPD_BACCE (Q45099) Cold shock-like protein cspD| Length = 66 Score = 65.9 bits (159), Expect = 4e-11 Identities = 33/63 (52%), Positives = 45/63 (71%) Frame = +2 Query: 80 GTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGRTKAS 259 G VKWFN KGFGFI E G ED+FVH SAI+ DG+++L E V F+++ G+ G +A+ Sbjct: 4 GKVKWFNGEKGFGFIEVE-GGEDVFVHFSAIQGDGFKTLEEGQEVSFEIVDGNRG-PQAA 61 Query: 260 DVT 268 +VT Sbjct: 62 NVT 64
>CSPD_BACSU (P51777) Cold shock protein cspD| Length = 66 Score = 65.5 bits (158), Expect = 5e-11 Identities = 33/62 (53%), Positives = 44/62 (70%) Frame = +2 Query: 80 GTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGRTKAS 259 G VKWFN KGFGFI E G +D+FVH +AI+ DGY+SL E V F+++ G+ G +AS Sbjct: 4 GKVKWFNNEKGFGFIEVE-GGDDVFVHFTAIEGDGYKSLEEGQEVSFEIVEGNRG-PQAS 61 Query: 260 DV 265 +V Sbjct: 62 NV 63
>CSPA_STRP8 (P0A361) Major cold shock protein| Length = 67 Score = 65.5 bits (158), Expect = 5e-11 Identities = 31/56 (55%), Positives = 41/56 (73%) Frame = +2 Query: 77 KGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDG 244 +GTVKWFN KGFGFIS E+G +D+F H SAI+++G+++L E V FDV G G Sbjct: 3 QGTVKWFNAEKGFGFISTENG-QDVFAHFSAIQTNGFKTLEEGQKVAFDVEEGQRG 57
>CSPA_STRP3 (P0A360) Major cold shock protein| Length = 67 Score = 65.5 bits (158), Expect = 5e-11 Identities = 31/56 (55%), Positives = 41/56 (73%) Frame = +2 Query: 77 KGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDG 244 +GTVKWFN KGFGFIS E+G +D+F H SAI+++G+++L E V FDV G G Sbjct: 3 QGTVKWFNAEKGFGFISTENG-QDVFAHFSAIQTNGFKTLEEGQKVAFDVEEGQRG 57
>CSPA_STRP1 (P0C0F1) Major cold shock protein| Length = 67 Score = 65.5 bits (158), Expect = 5e-11 Identities = 31/56 (55%), Positives = 41/56 (73%) Frame = +2 Query: 77 KGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDG 244 +GTVKWFN KGFGFIS E+G +D+F H SAI+++G+++L E V FDV G G Sbjct: 3 QGTVKWFNAEKGFGFISTENG-QDVFAHFSAIQTNGFKTLEEGQKVAFDVEEGQRG 57
>CSPA_SHEVI (Q9S1B7) Cold shock-like protein cspA| Length = 70 Score = 65.5 bits (158), Expect = 5e-11 Identities = 32/64 (50%), Positives = 45/64 (70%) Frame = +2 Query: 80 GTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGRTKAS 259 GTVKWFN KGFGF++ ++G D+FVH AI S+G+++L+E V F+V G G +AS Sbjct: 7 GTVKWFNEDKGFGFLTQDNGGADVFVHFRAIASEGFKTLDEGQKVTFEVEQGPKG-LQAS 65 Query: 260 DVTA 271 +V A Sbjct: 66 NVIA 69
>CSPA_BORPE (P0A352) Cold shock-like protein cspA| Length = 67 Score = 65.5 bits (158), Expect = 5e-11 Identities = 29/55 (52%), Positives = 37/55 (67%) Frame = +2 Query: 80 GTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDG 244 G VKWFN KG+GFI+PE G +DLF H S I+++G++SL EN V F G G Sbjct: 4 GVVKWFNAEKGYGFITPEAGGKDLFAHFSEIQANGFKSLEENQRVSFVTAMGPKG 58
>CSPA_BORPA (P0A354) Cold shock-like protein cspA| Length = 67 Score = 65.5 bits (158), Expect = 5e-11 Identities = 29/55 (52%), Positives = 37/55 (67%) Frame = +2 Query: 80 GTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDG 244 G VKWFN KG+GFI+PE G +DLF H S I+++G++SL EN V F G G Sbjct: 4 GVVKWFNAEKGYGFITPEAGGKDLFAHFSEIQANGFKSLEENQRVSFVTAMGPKG 58
>CSPA_BORBR (P0A353) Cold shock-like protein cspA| Length = 67 Score = 65.5 bits (158), Expect = 5e-11 Identities = 29/55 (52%), Positives = 37/55 (67%) Frame = +2 Query: 80 GTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDG 244 G VKWFN KG+GFI+PE G +DLF H S I+++G++SL EN V F G G Sbjct: 4 GVVKWFNAEKGYGFITPEAGGKDLFAHFSEIQANGFKSLEENQRVSFVTAMGPKG 58
>CSPD_HAEIN (P46449) Cold shock-like protein cspD| Length = 72 Score = 65.1 bits (157), Expect = 7e-11 Identities = 30/55 (54%), Positives = 35/55 (63%) Frame = +2 Query: 80 GTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDG 244 G VKWFN KGFGFIS E D+F H S I+ DGYRSL V+F+V+ D G Sbjct: 4 GIVKWFNNAKGFGFISAEGVDADIFAHYSVIEMDGYRSLKAGQKVQFEVLHSDKG 58
>CSPD_BACCR (Q816H3) Cold shock-like protein cspD| Length = 66 Score = 65.1 bits (157), Expect = 7e-11 Identities = 32/63 (50%), Positives = 45/63 (71%) Frame = +2 Query: 80 GTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGRTKAS 259 G VKWFN KGFGFI E G +D+FVH SAI+ DG+++L E V F+++ G+ G +A+ Sbjct: 4 GKVKWFNSEKGFGFIEVE-GGDDVFVHFSAIQGDGFKTLEEGQEVSFEIVEGNRG-PQAA 61 Query: 260 DVT 268 +VT Sbjct: 62 NVT 64
>CSPD_BACAN (Q81K90) Cold shock-like protein cspD| Length = 66 Score = 65.1 bits (157), Expect = 7e-11 Identities = 32/63 (50%), Positives = 45/63 (71%) Frame = +2 Query: 80 GTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGRTKAS 259 G VKWFN KGFGFI E G +D+FVH SAI+ DG+++L E V F+++ G+ G +A+ Sbjct: 4 GKVKWFNSEKGFGFIEVE-GGDDVFVHFSAIQGDGFKTLEEGQEVSFEIVEGNRG-PQAA 61 Query: 260 DVT 268 +VT Sbjct: 62 NVT 64
>CSPB_BACSU (P32081) Cold shock protein cspB (Major cold shock protein)| Length = 67 Score = 65.1 bits (157), Expect = 7e-11 Identities = 31/65 (47%), Positives = 47/65 (72%) Frame = +2 Query: 74 VKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGRTK 253 ++G VKWFN KGFGFI E G +D+FVH SAI+ +G+++L E V F+++ G+ G + Sbjct: 2 LEGKVKWFNSEKGFGFIEVE-GQDDVFVHFSAIQGEGFKTLEEGQAVSFEIVEGNRG-PQ 59 Query: 254 ASDVT 268 A++VT Sbjct: 60 AANVT 64
>CSPA_STRP6 (Q5X9L4) Major cold shock protein| Length = 67 Score = 65.1 bits (157), Expect = 7e-11 Identities = 31/56 (55%), Positives = 40/56 (71%) Frame = +2 Query: 77 KGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDG 244 +GTVKWFN KGFGFIS E+G +D+F H SAI++ G+++L E V FDV G G Sbjct: 3 QGTVKWFNAEKGFGFISTENG-QDVFAHFSAIQTSGFKTLEEGQKVAFDVEEGQRG 57
>CSPG_SHEVI (Q9S170) Cold shock-like protein cspG| Length = 70 Score = 64.7 bits (156), Expect = 9e-11 Identities = 31/68 (45%), Positives = 42/68 (61%) Frame = +2 Query: 62 MGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDD 241 M G VKWFN KGFGFI+ ++G +D+FVH +I SDG+++L E V F+V G Sbjct: 1 MSNSTTGLVKWFNEEKGFGFITQDNGGDDVFVHFRSITSDGFKTLAEGQKVSFEVEQGQK 60 Query: 242 GRTKASDV 265 G A+ V Sbjct: 61 GLQAANVV 68
>CSPD_VIBCH (Q9KSW4) Cold shock-like protein cspD| Length = 76 Score = 63.5 bits (153), Expect = 2e-10 Identities = 33/75 (44%), Positives = 39/75 (52%) Frame = +2 Query: 62 MGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDD 241 M + GTVKWFN KGFGFI PE D+F H S I+ DGYR+L V + V G Sbjct: 1 MYSMATGTVKWFNNAKGFGFICPEGEDGDIFAHYSTIQMDGYRTLKAGQQVSYQVEQGPK 60 Query: 242 GRTKASDVTAPGGGA 286 G + V G A Sbjct: 61 GYHASCVVPIEGQSA 75
>CSPB_BACST (P42016) Cold shock protein cspB (Major cold shock protein)| Length = 66 Score = 62.8 bits (151), Expect = 3e-10 Identities = 30/63 (47%), Positives = 43/63 (68%) Frame = +2 Query: 77 KGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGRTKA 256 +G VKWFN KG+GFI E GS D+FVH +AI+ +G++SL E V F+++ G+ G A Sbjct: 3 RGKVKWFNNEKGYGFIEVEGGS-DVFVHFTAIQGEGFKSLEEGQEVSFEIVQGNRGPQAA 61 Query: 257 SDV 265 + V Sbjct: 62 NVV 64
>CSPE_BACCR (Q81DK5) Cold shock-like protein cspE| Length = 67 Score = 62.4 bits (150), Expect = 5e-10 Identities = 31/55 (56%), Positives = 38/55 (69%) Frame = +2 Query: 80 GTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDG 244 G VKWFN KGFGFI DG+ D+FVH SAI DG++SL+E V F+V G+ G Sbjct: 5 GKVKWFNSEKGFGFIEVADGN-DVFVHFSAITGDGFKSLDEGQEVSFEVEEGNRG 58
>CSPE_BACAN (Q81QK2) Cold shock-like protein cspE| Length = 67 Score = 62.0 bits (149), Expect = 6e-10 Identities = 31/55 (56%), Positives = 38/55 (69%) Frame = +2 Query: 80 GTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDG 244 G VKWFN KGFGFI E G+ D+FVH SAI DG++SL+E V F+V G+ G Sbjct: 5 GKVKWFNSEKGFGFIEVEGGN-DVFVHFSAITGDGFKSLDEGQEVSFEVEDGNRG 58
>CSP_THEMA (O54310) Cold shock-like protein| Length = 66 Score = 61.6 bits (148), Expect = 8e-10 Identities = 27/57 (47%), Positives = 42/57 (73%) Frame = +2 Query: 74 VKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDG 244 ++G VKWF+ KG+GFI+ ++G D+FVH SAI+ +G+++L E VVEF++ G G Sbjct: 1 MRGKVKWFDSKKGYGFITKDEGG-DVFVHWSAIEMEGFKTLKEGQVVEFEIQEGKKG 56
>CSPB_BACCL (P41016) Cold shock protein cspB| Length = 66 Score = 61.6 bits (148), Expect = 8e-10 Identities = 29/63 (46%), Positives = 43/63 (68%) Frame = +2 Query: 77 KGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGRTKA 256 +G VKWFN KG+GFI E GS D+FVH +AI+ +G+++L E V F+++ G+ G A Sbjct: 3 RGKVKWFNNEKGYGFIEVEGGS-DVFVHFTAIQGEGFKTLEEGQEVSFEIVQGNRGPQAA 61 Query: 257 SDV 265 + V Sbjct: 62 NVV 64
>CSP_AQUAE (O67327) Cold shock-like protein| Length = 70 Score = 61.2 bits (147), Expect = 1e-09 Identities = 26/56 (46%), Positives = 40/56 (71%) Frame = +2 Query: 77 KGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDG 244 +GTVKWF+ KG+GFI+ ED + D+FVH + I+ +G+++L + VEFDV+ G Sbjct: 4 RGTVKWFSKDKGYGFITREDTNADVFVHFTDIQMEGFKTLQKGQKVEFDVVEDTKG 59
>CSPA_RICPR (Q9ZCP9) Cold shock-like protein cspA| Length = 70 Score = 61.2 bits (147), Expect = 1e-09 Identities = 27/55 (49%), Positives = 36/55 (65%) Frame = +2 Query: 62 MGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDV 226 M + G VKW+N TK FGFI ++G +D+FVH+SAI + G SL E V FD+ Sbjct: 1 MATNIVGKVKWYNSTKNFGFIEQDNGGKDVFVHKSAIDAAGLHSLEEGQEVIFDI 55
>CSPE_BACCE (Q45100) Cold shock-like protein cspE (Fragment)| Length = 54 Score = 60.8 bits (146), Expect = 1e-09 Identities = 30/49 (61%), Positives = 35/49 (71%) Frame = +2 Query: 80 GTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDV 226 G VKWFN KGFGFI DGS D+FVH SAI DG++SL+E V F+V Sbjct: 5 GKVKWFNSEKGFGFIEVADGS-DVFVHFSAITGDGFKSLDEGQEVSFEV 52
>CSPA_BACCR (Q81GQ6) Major cold shock protein cspA| Length = 67 Score = 60.8 bits (146), Expect = 1e-09 Identities = 30/57 (52%), Positives = 38/57 (66%) Frame = +2 Query: 74 VKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDG 244 V G VKWFN KGFGFI G D+FVH SAI++DG++SL E V F++ G+ G Sbjct: 3 VTGQVKWFNNEKGFGFIEVP-GENDVFVHFSAIETDGFKSLEEGQKVSFEIEEGNRG 58
>CSPA_BACCE (Q45096) Major cold shock protein cspA| Length = 67 Score = 60.8 bits (146), Expect = 1e-09 Identities = 30/57 (52%), Positives = 38/57 (66%) Frame = +2 Query: 74 VKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDG 244 V G VKWFN KGFGFI G D+FVH SAI++DG++SL E V F++ G+ G Sbjct: 3 VTGQVKWFNNEKGFGFIEVP-GENDVFVHFSAIETDGFKSLEEGQKVSFEIEDGNRG 58
>CSPA_BACAN (Q81TW8) Major cold shock protein cspA| Length = 67 Score = 60.8 bits (146), Expect = 1e-09 Identities = 30/57 (52%), Positives = 38/57 (66%) Frame = +2 Query: 74 VKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDG 244 V G VKWFN KGFGFI G D+FVH SAI++DG++SL E V F++ G+ G Sbjct: 3 VTGQVKWFNNEKGFGFIEVP-GENDVFVHFSAIETDGFKSLEEGQKVSFEIEEGNRG 58
>CSPB_BACGO (P41018) Cold shock protein cspB (Fragment)| Length = 57 Score = 60.5 bits (145), Expect = 2e-09 Identities = 27/58 (46%), Positives = 39/58 (67%) Frame = +2 Query: 86 VKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGRTKAS 259 +KWFN KGFGFI E G +D+FVH SAI+ +G++ L E V F+++ G+ G A+ Sbjct: 1 IKWFNSEKGFGFIEVE-GQDDVFVHFSAIQGEGFKCLEEGQAVSFEIVEGNRGPQAAN 57
>CSPA_SHIBO (Q53816) Major cold shock protein (Fragment)| Length = 46 Score = 60.5 bits (145), Expect = 2e-09 Identities = 26/43 (60%), Positives = 36/43 (83%) Frame = +2 Query: 107 KGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITG 235 KGFGFI+P+DGS+D+FVH SAI++DGY+SL+E V F + +G Sbjct: 2 KGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESG 44
>CSPA_SALVI (Q56178) Major cold shock protein (Fragment)| Length = 46 Score = 60.5 bits (145), Expect = 2e-09 Identities = 26/43 (60%), Positives = 36/43 (83%) Frame = +2 Query: 107 KGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITG 235 KGFGFI+P+DGS+D+FVH SAI++DGY+SL+E V F + +G Sbjct: 2 KGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESG 44
>CSPA_ENTAE (Q46664) Major cold shock protein (Fragment)| Length = 46 Score = 60.5 bits (145), Expect = 2e-09 Identities = 26/43 (60%), Positives = 36/43 (83%) Frame = +2 Query: 107 KGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITG 235 KGFGFI+P+DGS+D+FVH SAI++DGY+SL+E V F + +G Sbjct: 2 KGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESG 44
>CSPA_CITFR (Q46051) Major cold shock protein (Fragment)| Length = 46 Score = 60.5 bits (145), Expect = 2e-09 Identities = 26/43 (60%), Positives = 36/43 (83%) Frame = +2 Query: 107 KGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITG 235 KGFGFI+P+DGS+D+FVH SAI++DGY+SL+E V F + +G Sbjct: 2 KGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESG 44
>CSPA_RICCN (Q92GV1) Cold shock-like protein cspA| Length = 70 Score = 59.7 bits (143), Expect = 3e-09 Identities = 26/55 (47%), Positives = 36/55 (65%) Frame = +2 Query: 62 MGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDV 226 M + G VKW+N TK FGFI ++G +D+FVH+SA+ + G SL E V FD+ Sbjct: 1 MATNIVGKVKWYNSTKNFGFIEQDNGGKDVFVHKSAVDAAGLHSLEEGQDVIFDL 55
>CSPA_KLEPN (Q48493) Major cold shock protein (Fragment)| Length = 46 Score = 59.3 bits (142), Expect = 4e-09 Identities = 26/44 (59%), Positives = 35/44 (79%) Frame = +2 Query: 104 TKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITG 235 +KGFGFISP+DGS+D+FVH SAI+SD +++LNE V F + G Sbjct: 1 SKGFGFISPKDGSKDVFVHFSAIQSDSFKTLNEGQEVSFTIENG 44
>CSPA_AERHY (Q44078) Major cold-shock protein (Fragment)| Length = 46 Score = 55.8 bits (133), Expect = 4e-08 Identities = 25/43 (58%), Positives = 34/43 (79%) Frame = +2 Query: 107 KGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITG 235 KGFGFISP DGS+D+FVH SAI++ G+++L+E VEF + G Sbjct: 2 KGFGFISPTDGSKDVFVHFSAIQTPGFKTLDEGQRVEFTIEQG 44
>CSPA_YEREN (Q56922) Major cold shock protein (Fragment)| Length = 46 Score = 55.1 bits (131), Expect = 7e-08 Identities = 24/43 (55%), Positives = 34/43 (79%) Frame = +2 Query: 107 KGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITG 235 KGFGFI+P DGS+D+FVH SAI+S+ +++L+E VEF + G Sbjct: 2 KGFGFITPADGSKDVFVHFSAIQSNDFKTLDEGQKVEFSIENG 44
>CSPA_AERSA (Q44317) Major cold-shock protein (Fragment)| Length = 46 Score = 54.7 bits (130), Expect = 9e-08 Identities = 25/43 (58%), Positives = 33/43 (76%) Frame = +2 Query: 107 KGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITG 235 KGFGFISP DGS+D+FVH SAI+S +++L+E VEF + G Sbjct: 2 KGFGFISPADGSKDVFVHFSAIQSTSFKTLDEGQRVEFTIEQG 44
>TAPA_PSEFR (P72191) Temperature acclimation protein A (E7.0) (Fragment)| Length = 59 Score = 51.6 bits (122), Expect = 8e-07 Identities = 26/50 (52%), Positives = 32/50 (64%) Frame = +2 Query: 95 FNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDG 244 FN KGFGFI+PE G DLFVH AI+ +G++SL E V F + G G Sbjct: 1 FNDEKGFGFITPESG-PDLFVHFRAIQGNGFKSLKEGQKVTFIAVQGQKG 49
>CSPA_STRDY (Q53984) Major cold shock protein (Fragment)| Length = 45 Score = 49.7 bits (117), Expect = 3e-06 Identities = 24/43 (55%), Positives = 33/43 (76%) Frame = +2 Query: 107 KGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITG 235 KGFGFIS E+G +D+F H SAI+++G+++L E VEFDV G Sbjct: 2 KGFGFISTENG-QDVFAHFSAIQTNGFKTLEEGQKVEFDVEEG 43
>CSPA_PHOMO (Q51929) Major cold shock protein (Fragment)| Length = 46 Score = 47.8 bits (112), Expect = 1e-05 Identities = 21/43 (48%), Positives = 29/43 (67%) Frame = +2 Query: 107 KGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITG 235 KGFGF++ +G D+FVH AI S+G+++L E V FDV G Sbjct: 2 KGFGFLTQNNGGADVFVHFRAIASEGFKTLTEGQKVSFDVEQG 44
>CSPA_STRPY (P0C0F0) Major cold shock protein (Fragment)| Length = 45 Score = 47.4 bits (111), Expect = 2e-05 Identities = 23/43 (53%), Positives = 32/43 (74%) Frame = +2 Query: 107 KGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITG 235 KGFGFIS E+G +D+F H SAI+++G+++L E V FDV G Sbjct: 2 KGFGFISTENG-QDVFAHFSAIQTNGFKTLEEGQKVAFDVEEG 43
>CSPA_PHOPO (Q52287) Major cold shock protein (Fragment)| Length = 46 Score = 47.0 bits (110), Expect = 2e-05 Identities = 21/43 (48%), Positives = 30/43 (69%) Frame = +2 Query: 107 KGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITG 235 KGFGFI+ ++G D+FVH AI S+G+++L E V F+V G Sbjct: 2 KGFGFITQDNGGADVFVHFRAIASEGFKTLAEGQKVSFEVEQG 44
>CSDC2_RAT (Q63430) Cold shock domain-containing protein C2 (RNA-binding| protein PIPPin) Length = 154 Score = 45.4 bits (106), Expect = 6e-05 Identities = 21/43 (48%), Positives = 29/43 (67%) Frame = +2 Query: 53 RRKMGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSD 181 R G KG K F+ ++G GFI+PE+GSED+FVH S I+ + Sbjct: 63 RASAGPVFKGVCKQFSRSQGHGFITPENGSEDIFVHVSDIEGE 105
>CSDC2_MOUSE (Q91YQ3) Cold shock domain-containing protein C2 (RNA-binding| protein PIPPin) Length = 154 Score = 45.4 bits (106), Expect = 6e-05 Identities = 21/43 (48%), Positives = 29/43 (67%) Frame = +2 Query: 53 RRKMGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSD 181 R G KG K F+ ++G GFI+PE+GSED+FVH S I+ + Sbjct: 63 RASAGPVFKGVCKQFSRSQGHGFITPENGSEDIFVHVSDIEGE 105
>CSDC2_HUMAN (Q9Y534) Cold shock domain-containing protein C2 (RNA-binding| protein PIPPin) Length = 153 Score = 45.4 bits (106), Expect = 6e-05 Identities = 21/43 (48%), Positives = 29/43 (67%) Frame = +2 Query: 53 RRKMGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSD 181 R G KG K F+ ++G GFI+PE+GSED+FVH S I+ + Sbjct: 62 RASAGPVFKGVCKQFSRSQGHGFITPENGSEDIFVHVSDIEGE 104
>CSPH_SALTY (P0A1D9) Cold shock-like protein cspH| Length = 70 Score = 40.8 bits (94), Expect = 0.001 Identities = 25/66 (37%), Positives = 34/66 (51%) Frame = +2 Query: 62 MGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDD 241 M ++ G VK F+ G G I+P DG +D+ VH SA + +L VEF I G Sbjct: 1 MSRKMTGIVKTFDCKSGKGLITPSDGRKDVQVHISACRQHETEALIPGIRVEFCRINGLR 60 Query: 242 GRTKAS 259 G T A+ Sbjct: 61 GPTAAN 66
>CSPH_SALTI (P0A1E0) Cold shock-like protein cspH| Length = 70 Score = 40.8 bits (94), Expect = 0.001 Identities = 25/66 (37%), Positives = 34/66 (51%) Frame = +2 Query: 62 MGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDD 241 M ++ G VK F+ G G I+P DG +D+ VH SA + +L VEF I G Sbjct: 1 MSRKMTGIVKTFDCKSGKGLITPSDGRKDVQVHISACRQHETEALIPGIRVEFCRINGLR 60 Query: 242 GRTKAS 259 G T A+ Sbjct: 61 GPTAAN 66
>CHSP1_MOUSE (Q9CR86) Calcium-regulated heat stable protein 1 (Calcium-regulated| heat-stable protein of 24 kDa) (CRHSP-24) Length = 148 Score = 39.7 bits (91), Expect = 0.003 Identities = 18/43 (41%), Positives = 25/43 (58%) Frame = +2 Query: 53 RRKMGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSD 181 R G KG K F +KG GFI+P DG D+F+H S ++ + Sbjct: 57 RASQGPVYKGVCKCFCRSKGHGFITPADGGPDIFLHISDVEGE 99
>CHSP1_RAT (Q9WU49) Calcium-regulated heat stable protein 1 (Calcium-regulated| heat-stable protein of 24 kDa) (CRHSP-24) Length = 147 Score = 39.7 bits (91), Expect = 0.003 Identities = 18/43 (41%), Positives = 25/43 (58%) Frame = +2 Query: 53 RRKMGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSD 181 R G KG K F +KG GFI+P DG D+F+H S ++ + Sbjct: 56 RASQGPVYKGVCKCFCRSKGHGFITPADGGPDIFLHISDVEGE 98
>CHSP1_HUMAN (Q9Y2V2) Calcium-regulated heat stable protein 1 (Calcium-regulated| heat-stable protein of 24 kDa) (CRHSP-24) Length = 147 Score = 39.7 bits (91), Expect = 0.003 Identities = 18/43 (41%), Positives = 25/43 (58%) Frame = +2 Query: 53 RRKMGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSD 181 R G KG K F +KG GFI+P DG D+F+H S ++ + Sbjct: 56 RASQGPVYKGVCKCFCRSKGHGFITPADGGPDIFLHISDVEGE 98
>CSPS_STRTR (P81622) Cold shock protein CspSt (Fragment)| Length = 21 Score = 37.7 bits (86), Expect = 0.012 Identities = 15/19 (78%), Positives = 16/19 (84%) Frame = +2 Query: 80 GTVKWFNVTKGFGFISPED 136 GTVKWFN KGFGFI+ ED Sbjct: 3 GTVKWFNAEKGFGFITSED 21
>CSPH_SHIFL (P0A985) Cold shock-like protein cspH (CSP-H)| Length = 70 Score = 36.6 bits (83), Expect = 0.027 Identities = 24/66 (36%), Positives = 32/66 (48%) Frame = +2 Query: 62 MGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDD 241 M ++ G VK F+ G GFI P DG +++ VH SA L VEF + G Sbjct: 1 MSRKMTGIVKTFDRKSGKGFIIPSDGRKEVQVHISAFTPRDAEVLIPGLRVEFCRVNGLR 60 Query: 242 GRTKAS 259 G T A+ Sbjct: 61 GPTAAN 66
>CSPH_ECOLI (P0A982) Cold shock-like protein cspH (CSP-H)| Length = 70 Score = 36.6 bits (83), Expect = 0.027 Identities = 24/66 (36%), Positives = 32/66 (48%) Frame = +2 Query: 62 MGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDD 241 M ++ G VK F+ G GFI P DG +++ VH SA L VEF + G Sbjct: 1 MSRKMTGIVKTFDRKSGKGFIIPSDGRKEVQVHISAFTPRDAEVLIPGLRVEFCRVNGLR 60 Query: 242 GRTKAS 259 G T A+ Sbjct: 61 GPTAAN 66
>CSPH_ECOL6 (P0A983) Cold shock-like protein cspH (CSP-H)| Length = 70 Score = 36.6 bits (83), Expect = 0.027 Identities = 24/66 (36%), Positives = 32/66 (48%) Frame = +2 Query: 62 MGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDD 241 M ++ G VK F+ G GFI P DG +++ VH SA L VEF + G Sbjct: 1 MSRKMTGIVKTFDRKSGKGFIIPSDGRKEVQVHISAFTPRDAEVLIPGLRVEFCRVNGLR 60 Query: 242 GRTKAS 259 G T A+ Sbjct: 61 GPTAAN 66
>CSPH_ECO57 (P0A984) Cold shock-like protein cspH (CSP-H)| Length = 70 Score = 36.6 bits (83), Expect = 0.027 Identities = 24/66 (36%), Positives = 32/66 (48%) Frame = +2 Query: 62 MGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDD 241 M ++ G VK F+ G GFI P DG +++ VH SA L VEF + G Sbjct: 1 MSRKMTGIVKTFDRKSGKGFIIPSDGRKEVQVHISAFTPRDAEVLIPGLRVEFCRVNGLR 60 Query: 242 GRTKAS 259 G T A+ Sbjct: 61 GPTAAN 66
>CSPF_ECOLI (P0A976) Cold shock-like protein cspF (CSP-F)| Length = 70 Score = 35.4 bits (80), Expect = 0.059 Identities = 22/66 (33%), Positives = 32/66 (48%) Frame = +2 Query: 62 MGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDD 241 M ++ G VK F+ G G I+P DG D+ +H SA+ + VEF I G Sbjct: 1 MSRKMTGIVKTFDGKSGKGLITPSDGRIDVQLHVSALNLRDAEEITTGLRVEFCRINGLR 60 Query: 242 GRTKAS 259 G + A+ Sbjct: 61 GPSAAN 66
>CSPF_ECOL6 (P0A977) Cold shock-like protein cspF (CSP-F)| Length = 70 Score = 35.4 bits (80), Expect = 0.059 Identities = 22/66 (33%), Positives = 32/66 (48%) Frame = +2 Query: 62 MGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDD 241 M ++ G VK F+ G G I+P DG D+ +H SA+ + VEF I G Sbjct: 1 MSRKMTGIVKTFDGKSGKGLITPSDGRIDVQLHVSALNLRDAEEITTGLRVEFCRINGLR 60 Query: 242 GRTKAS 259 G + A+ Sbjct: 61 GPSAAN 66
>CSDE1_RAT (P18395) Cold shock domain-containing protein E1 (UNR protein)| Length = 798 Score = 33.5 bits (75), Expect = 0.22 Identities = 25/70 (35%), Positives = 36/70 (51%) Frame = +2 Query: 56 RKMGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITG 235 +K AR +G V + + FGFI D +++F H S K D +L D VEF I Sbjct: 180 KKKQARYQGVV--CAMKEAFGFIERGDVVKEIFFHYSEFKGD-LETLQPGDDVEF-TIKD 235 Query: 236 DDGRTKASDV 265 +G+ A+DV Sbjct: 236 RNGKEVATDV 245 Score = 29.6 bits (65), Expect = 3.2 Identities = 16/51 (31%), Positives = 24/51 (47%) Frame = +2 Query: 113 FGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGRTKASDV 265 FGFI + +++F H S D SL D+VE+ + G + A V Sbjct: 530 FGFIETANHDKEIFFHYSEFSGD-VDSLELGDMVEYSLSKGKGNKVSAEKV 579
>CSDE1_MOUSE (Q91W50) Cold shock domain-containing protein E1| Length = 798 Score = 33.5 bits (75), Expect = 0.22 Identities = 25/70 (35%), Positives = 36/70 (51%) Frame = +2 Query: 56 RKMGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITG 235 +K AR +G V + + FGFI D +++F H S K D +L D VEF I Sbjct: 180 KKKQARCQGVV--CAMKEAFGFIERGDVVKEIFFHYSEFKGD-LETLQPGDDVEF-TIKD 235 Query: 236 DDGRTKASDV 265 +G+ A+DV Sbjct: 236 RNGKEVATDV 245 Score = 29.6 bits (65), Expect = 3.2 Identities = 16/51 (31%), Positives = 24/51 (47%) Frame = +2 Query: 113 FGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGRTKASDV 265 FGFI + +++F H S D SL D+VE+ + G + A V Sbjct: 530 FGFIETANHDKEIFFHYSEFSGD-VDSLELGDMVEYSLSKGKGNKVSAEKV 579
>CSDE1_HUMAN (O75534) Cold shock domain-containing protein E1 (UNR protein)| (N-ras upstream gene protein) Length = 798 Score = 33.5 bits (75), Expect = 0.22 Identities = 25/70 (35%), Positives = 36/70 (51%) Frame = +2 Query: 56 RKMGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITG 235 +K AR +G V + + FGFI D +++F H S K D +L D VEF I Sbjct: 180 KKKQARCQGVV--CAMKEAFGFIERGDVVKEIFFHYSEFKGD-LETLQPGDDVEF-TIKD 235 Query: 236 DDGRTKASDV 265 +G+ A+DV Sbjct: 236 RNGKEVATDV 245 Score = 29.6 bits (65), Expect = 3.2 Identities = 16/51 (31%), Positives = 24/51 (47%) Frame = +2 Query: 113 FGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGRTKASDV 265 FGFI + +++F H S D SL D+VE+ + G + A V Sbjct: 530 FGFIETANHDKEIFFHYSEFSGD-VDSLELGDMVEYSLSKGKGNKVSAEKV 579
>SYK_LACPL (Q88Z28) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)| (LysRS) Length = 499 Score = 32.0 bits (71), Expect = 0.65 Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 2/96 (2%) Frame = +2 Query: 26 ARVLVLRFRRRKMGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNEN 205 A+ +V R + R KG V GF I G L++ + + D Y + Sbjct: 57 AKQVVATIAGRMLAKRGKGKV-------GFADIWDRSGKMQLYIRKDVVGEDTYHIFKRS 109 Query: 206 DVVEFDVITGDDGRTKASDVTAPGGGA--LSGGSRP 307 D+ +F ITG +T ++T G LS RP Sbjct: 110 DIGDFLGITGQVFKTDFGELTIKVTGLTFLSKALRP 145
>MYO1A_CHICK (P47807) Myosin Ia (Brush border myosin I) (BBM-I) (BBMI) (Myosin I| heavy chain) (MIHC) Length = 1045 Score = 30.8 bits (68), Expect = 1.5 Identities = 31/104 (29%), Positives = 44/104 (42%), Gaps = 9/104 (8%) Frame = +2 Query: 29 RVLVLRFRRRKMGARVKGTVKWFNVTKGFGFISPEDGSE----DLFV---HQSAIKSDGY 187 R L RF R ++ + V N K +PE E + F H AI D Y Sbjct: 29 RTLQERFSRGEIYTYIGEVVISVNPYKPLPIYTPEKVEEYHNCNFFAVKPHIYAIADDAY 88 Query: 188 RSLNENDVVEFDVITGDD--GRTKASDVTAPGGGALSGGSRPSD 313 RSL + D + +ITG+ G+T+AS + A+S D Sbjct: 89 RSLRDRDRDQCILITGESGAGKTEASKLVMSYVAAVSSKGEEVD 132
>SYK_STRP8 (Q8P1X6) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)| (LysRS) Length = 497 Score = 30.8 bits (68), Expect = 1.5 Identities = 18/71 (25%), Positives = 32/71 (45%) Frame = +2 Query: 56 RKMGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITG 235 R M R KG V GF + +G L+V + ++ D Y + D+ +F + G Sbjct: 68 RLMTKRGKGKV-------GFAHLQDREGQIQLYVRKDSVSEDNYEIFKKADLGDFIGVEG 120 Query: 236 DDGRTKASDVT 268 + RT +++ Sbjct: 121 EVMRTDMGELS 131
>SYK_STRP6 (Q5XD62) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)| (LysRS) Length = 497 Score = 30.8 bits (68), Expect = 1.5 Identities = 18/71 (25%), Positives = 32/71 (45%) Frame = +2 Query: 56 RKMGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITG 235 R M R KG V GF + +G L+V + ++ D Y + D+ +F + G Sbjct: 68 RLMTKRGKGKV-------GFAHLQDREGQIQLYVRKDSVSEDNYEIFKKADLGDFIGVEG 120 Query: 236 DDGRTKASDVT 268 + RT +++ Sbjct: 121 EVMRTDMGELS 131
>RPOB_SYNEL (Q8DL55) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1108 Score = 30.0 bits (66), Expect = 2.5 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 3/60 (5%) Frame = -2 Query: 267 VTSEALVRPSSPVMTSNSTTSFSLRLR*PSDLMADWWTKRSSLPS---SGEMKPNPLVTL 97 V +++ RP +P SF + +R L D +++S+PS GEMKP+P V L Sbjct: 1024 VKGQSIPRPGTP-------ESFKVLMRELQSLCLDISVRKASIPSFDDDGEMKPDPEVDL 1076
>SYN_PASMU (Q9CN06) Asparaginyl-tRNA synthetase (EC 6.1.1.22)| (Asparagine--tRNA ligase) (AsnRS) Length = 467 Score = 30.0 bits (66), Expect = 2.5 Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%) Frame = +2 Query: 206 DVVEFDVITGDDGRTKAS-DVTAPGGGALSGGSR 304 D+ F + DDG+T A+ DV APG G + GGS+ Sbjct: 363 DIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQ 396
>SYN_HAEDU (Q7VLL7) Asparaginyl-tRNA synthetase (EC 6.1.1.22)| (Asparagine--tRNA ligase) (AsnRS) Length = 467 Score = 30.0 bits (66), Expect = 2.5 Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%) Frame = +2 Query: 206 DVVEFDVITGDDGRTKAS-DVTAPGGGALSGGSR 304 D+ F + DDG+T A+ DV APG G + GGS+ Sbjct: 363 DIKAFYMRLNDDGKTVAAMDVLAPGIGEIIGGSQ 396
>SYN_VIBPA (Q87NH5) Asparaginyl-tRNA synthetase (EC 6.1.1.22)| (Asparagine--tRNA ligase) (AsnRS) Length = 466 Score = 30.0 bits (66), Expect = 2.5 Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%) Frame = +2 Query: 206 DVVEFDVITGDDGRTKAS-DVTAPGGGALSGGSR 304 D+ F + DDG+T A+ DV APG G + GGS+ Sbjct: 362 DIKAFYMRMNDDGKTVAAMDVLAPGIGEIIGGSQ 395
>SYN_PHOPR (Q6LPQ6) Asparaginyl-tRNA synthetase (EC 6.1.1.22)| (Asparagine--tRNA ligase) (AsnRS) Length = 466 Score = 30.0 bits (66), Expect = 2.5 Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%) Frame = +2 Query: 206 DVVEFDVITGDDGRTKAS-DVTAPGGGALSGGSR 304 D+ F + DDG+T A+ DV APG G + GGS+ Sbjct: 362 DIKAFYMRMNDDGKTVAAMDVLAPGIGEIIGGSQ 395
>SYN_PHOLL (Q7N622) Asparaginyl-tRNA synthetase (EC 6.1.1.22)| (Asparagine--tRNA ligase) (AsnRS) Length = 466 Score = 30.0 bits (66), Expect = 2.5 Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%) Frame = +2 Query: 206 DVVEFDVITGDDGRTKAS-DVTAPGGGALSGGSR 304 D+ F + DDG+T A+ DV APG G + GGS+ Sbjct: 362 DIKAFYMRMNDDGKTVAALDVLAPGIGEIIGGSQ 395
>SYN_ERWCT (Q6D453) Asparaginyl-tRNA synthetase (EC 6.1.1.22)| (Asparagine--tRNA ligase) (AsnRS) Length = 466 Score = 30.0 bits (66), Expect = 2.5 Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%) Frame = +2 Query: 206 DVVEFDVITGDDGRTKAS-DVTAPGGGALSGGSR 304 D+ F + DDG+T A+ DV APG G + GGS+ Sbjct: 362 DIKAFYMRMNDDGKTVAAMDVLAPGIGEIIGGSQ 395
>SYK_STRP3 (Q8K880) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)| (LysRS) Length = 497 Score = 30.0 bits (66), Expect = 2.5 Identities = 18/71 (25%), Positives = 32/71 (45%) Frame = +2 Query: 56 RKMGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITG 235 R M R KG V GF + +G L+V + ++ D Y + D+ +F + G Sbjct: 68 RLMTKRGKGKV-------GFAHLQDREGQIQLYVRKDSVGEDNYEIFKKADLGDFIGVEG 120 Query: 236 DDGRTKASDVT 268 + RT +++ Sbjct: 121 EVMRTDMGELS 131
>SYK_STRP1 (Q9A0V7) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)| (LysRS) Length = 497 Score = 30.0 bits (66), Expect = 2.5 Identities = 18/71 (25%), Positives = 32/71 (45%) Frame = +2 Query: 56 RKMGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITG 235 R M R KG V GF + +G L+V + ++ D Y + D+ +F + G Sbjct: 68 RLMTKRGKGKV-------GFAHLQDREGQIQLYVRKDSVGEDNYEIFKKADLGDFIGVEG 120 Query: 236 DDGRTKASDVT 268 + RT +++ Sbjct: 121 EVMRTDMGELS 131
>SRBS1_MOUSE (Q62417) Sorbin and SH3 domain-containing protein 1 (Ponsin)| (c-Cbl-associated protein) (CAP) (SH3 domain protein 5) (SH3P12) Length = 1290 Score = 29.6 bits (65), Expect = 3.2 Identities = 19/58 (32%), Positives = 27/58 (46%) Frame = -2 Query: 240 SSPVMTSNSTTSFSLRLR*PSDLMADWWTKRSSLPSSGEMKPNPLVTLNHFTVPLTLA 67 SSPV S S P D AD W SS ++G +P+PL + +V +L+ Sbjct: 54 SSPVSPQESPKHESKSGLEPEDPSADEWKLSSSADTNGNAQPSPLAAKGYRSVHPSLS 111
>MYO1B_HUMAN (O43795) Myosin Ib (Myosin I alpha) (MMI-alpha) (MMIa) (MYH-1c)| Length = 1136 Score = 29.6 bits (65), Expect = 3.2 Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 9/93 (9%) Frame = +2 Query: 44 RFRRRKMGARVKGTVKWFNVTKGFGFISPEDGSE-------DLFVHQSAIKSDGYRSLNE 202 RF ++ + V N + SPE E +L H A+ + YRSL + Sbjct: 38 RFDHSEIYTYIGSVVISVNPYRSLPIYSPEKVEEYRNRNFYELSPHIFALSDEAYRSLRD 97 Query: 203 NDVVEFDVITGDD--GRTKASDVTAPGGGALSG 295 D + +ITG+ G+T+AS + A+ G Sbjct: 98 QDKDQCILITGESGAGKTEASKLVMSYVAAVCG 130
>FTZF1_DROME (P33244) Nuclear hormone receptor FTZ-F1 (FTZ-F1 alpha)| Length = 1027 Score = 29.6 bits (65), Expect = 3.2 Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Frame = +2 Query: 164 SAIKSDGYRSLNENDVVEFDVITG-DDGRTKASDVTAPGGGALSGGSRPS 310 +++ + + S +++F+V G DDG + T PG G+ SG S Sbjct: 246 TSVSTSNFLSSTTAQLLDFEVQVGKDDGHISTTTTTGPGSGSASGSGSGS 295
>SYK_STRMU (Q8DUW8) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)| (LysRS) Length = 496 Score = 29.6 bits (65), Expect = 3.2 Identities = 17/71 (23%), Positives = 32/71 (45%) Frame = +2 Query: 56 RKMGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITG 235 R M R KG V GF + +G ++V + + D Y+ + D+ +F + G Sbjct: 68 RLMTKRGKGKV-------GFAHLQDREGQIQIYVRKDTVGDDNYQIFKKADIGDFLGVEG 120 Query: 236 DDGRTKASDVT 268 + RT +++ Sbjct: 121 EIMRTDMGELS 131
>SYK_ENTFA (Q839A8) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)| (LysRS) Length = 498 Score = 29.3 bits (64), Expect = 4.2 Identities = 12/53 (22%), Positives = 24/53 (45%) Frame = +2 Query: 110 GFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDDGRTKASDVT 268 GF + +G ++V + + + Y D+ +F +TG +T +VT Sbjct: 82 GFAHLQDREGQIQIYVRKDQVGDEAYELFKHADLGDFFGVTGQVMKTNTGEVT 134
>FTSK_SHEON (Q8EER3) DNA translocase ftsK| Length = 911 Score = 29.3 bits (64), Expect = 4.2 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Frame = +2 Query: 119 FISPEDGSEDLFVHQSAI-KSDGYRSLNENDVVEFDVITGDDGRTKA 256 F +DG E +F ++ I + D S N++DV++FD T+A Sbjct: 336 FFEDDDGDEPVFHRETMIDEDDDTLSFNDDDVIDFDTKVSAGAVTQA 382
>MYO1B_RAT (Q05096) Myosin Ib (Myosin I alpha) (MMI-alpha) (MMIa) (Myosin| heavy chain myr 1) Length = 1136 Score = 28.9 bits (63), Expect = 5.5 Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 9/93 (9%) Frame = +2 Query: 44 RFRRRKMGARVKGTVKWFNVTKGFGFISPEDGSE-------DLFVHQSAIKSDGYRSLNE 202 RF ++ + V N + SPE + +L H A+ + YRSL + Sbjct: 38 RFDHNEIYTYIGSVVISVNPYRSLPIYSPEKVEDYRNRNFYELSPHIFALSDEAYRSLRD 97 Query: 203 NDVVEFDVITGDD--GRTKASDVTAPGGGALSG 295 D + +ITG+ G+T+AS + A+ G Sbjct: 98 QDKDQCILITGESGAGKTEASKLVMSYVAAVCG 130
>SYN_MYCGA (Q7NBM9) Asparaginyl-tRNA synthetase (EC 6.1.1.22)| (Asparagine--tRNA ligase) (AsnRS) Length = 457 Score = 28.9 bits (63), Expect = 5.5 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%) Frame = +2 Query: 206 DVVEFDVITGDDGRT-KASDVTAPGGGALSGGSRPSD 313 DV F + DD +T A+D+ APG G + GGS+ D Sbjct: 351 DVKAFYMKLNDDNQTVAATDLLAPGIGEICGGSQRED 387
>MYO1B_MOUSE (P46735) Myosin Ib (Myosin I alpha) (MMI-alpha) (MMIa) (MIH-L)| Length = 1107 Score = 28.9 bits (63), Expect = 5.5 Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 9/93 (9%) Frame = +2 Query: 44 RFRRRKMGARVKGTVKWFNVTKGFGFISPEDGSE-------DLFVHQSAIKSDGYRSLNE 202 RF ++ + V N + SPE + +L H A+ + YRSL + Sbjct: 38 RFDHNEIYTYIGSVVISVNPYRSLPIYSPEKVEDYRNRNFYELSPHIFALSDEAYRSLRD 97 Query: 203 NDVVEFDVITGDD--GRTKASDVTAPGGGALSG 295 D + +ITG+ G+T+AS + A+ G Sbjct: 98 QDKDQCILITGESGAGKTEASKLVMSYVAAVCG 130
>SYN_BACHK (Q6HCW9) Asparaginyl-tRNA synthetase (EC 6.1.1.22)| (Asparagine--tRNA ligase) (AsnRS) Length = 463 Score = 28.5 bits (62), Expect = 7.2 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%) Frame = +2 Query: 206 DVVEFDVITGDDGRT-KASDVTAPGGGALSGGSR 304 D+ F + DDG+T A+D+ PG G L GGS+ Sbjct: 359 DIKAFYMRLNDDGKTVAATDLLVPGIGELIGGSQ 392
>SYN_BACCZ (Q633N6) Asparaginyl-tRNA synthetase (EC 6.1.1.22)| (Asparagine--tRNA ligase) (AsnRS) Length = 463 Score = 28.5 bits (62), Expect = 7.2 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%) Frame = +2 Query: 206 DVVEFDVITGDDGRT-KASDVTAPGGGALSGGSR 304 D+ F + DDG+T A+D+ PG G L GGS+ Sbjct: 359 DIKAFYMRLNDDGKTVAATDLLVPGIGELIGGSQ 392
>SYN_BACC1 (Q72ZI3) Asparaginyl-tRNA synthetase (EC 6.1.1.22)| (Asparagine--tRNA ligase) (AsnRS) Length = 463 Score = 28.5 bits (62), Expect = 7.2 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%) Frame = +2 Query: 206 DVVEFDVITGDDGRT-KASDVTAPGGGALSGGSR 304 D+ F + DDG+T A+D+ PG G L GGS+ Sbjct: 359 DIKAFYMRLNDDGKTVAATDLLVPGIGELIGGSQ 392
>SYN_BACAN (Q81L32) Asparaginyl-tRNA synthetase (EC 6.1.1.22)| (Asparagine--tRNA ligase) (AsnRS) Length = 463 Score = 28.5 bits (62), Expect = 7.2 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%) Frame = +2 Query: 206 DVVEFDVITGDDGRT-KASDVTAPGGGALSGGSR 304 D+ F + DDG+T A+D+ PG G L GGS+ Sbjct: 359 DIKAFYMRLNDDGKTVAATDLLVPGIGELIGGSQ 392
>SYN_MESFL (Q6F0Y5) Asparaginyl-tRNA synthetase (EC 6.1.1.22)| (Asparagine--tRNA ligase) (AsnRS) Length = 454 Score = 28.5 bits (62), Expect = 7.2 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Frame = +2 Query: 206 DVVEFDVITGDDGRTKAS-DVTAPGGGALSGGS 301 D+ F + DDG+T A+ D+ PG G L GGS Sbjct: 350 DIKSFYMKQNDDGKTVAAVDLLVPGIGELCGGS 382
>SYN_SHIFL (P0A8M2) Asparaginyl-tRNA synthetase (EC 6.1.1.22)| (Asparagine--tRNA ligase) (AsnRS) Length = 465 Score = 28.5 bits (62), Expect = 7.2 Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%) Frame = +2 Query: 206 DVVEFDVITGDDGRTKAS-DVTAPGGGALSGGSR 304 D+ F + +DG+T A+ DV APG G + GGS+ Sbjct: 361 DIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQ 394
>SYN_ECOLI (P0A8M0) Asparaginyl-tRNA synthetase (EC 6.1.1.22)| (Asparagine--tRNA ligase) (AsnRS) Length = 465 Score = 28.5 bits (62), Expect = 7.2 Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%) Frame = +2 Query: 206 DVVEFDVITGDDGRTKAS-DVTAPGGGALSGGSR 304 D+ F + +DG+T A+ DV APG G + GGS+ Sbjct: 361 DIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQ 394
>SYN_ECOL6 (P0A8M1) Asparaginyl-tRNA synthetase (EC 6.1.1.22)| (Asparagine--tRNA ligase) (AsnRS) Length = 465 Score = 28.5 bits (62), Expect = 7.2 Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%) Frame = +2 Query: 206 DVVEFDVITGDDGRTKAS-DVTAPGGGALSGGSR 304 D+ F + +DG+T A+ DV APG G + GGS+ Sbjct: 361 DIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQ 394
>SYN_ECO57 (P58694) Asparaginyl-tRNA synthetase (EC 6.1.1.22)| (Asparagine--tRNA ligase) (AsnRS) Length = 465 Score = 28.5 bits (62), Expect = 7.2 Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%) Frame = +2 Query: 206 DVVEFDVITGDDGRTKAS-DVTAPGGGALSGGSR 304 D+ F + +DG+T A+ DV APG G + GGS+ Sbjct: 361 DIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQ 394
>SYN_MANSM (Q65TR1) Asparaginyl-tRNA synthetase (EC 6.1.1.22)| (Asparagine--tRNA ligase) (AsnRS) Length = 467 Score = 28.5 bits (62), Expect = 7.2 Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%) Frame = +2 Query: 206 DVVEFDVITGDDGRTKAS-DVTAPGGGALSGGSR 304 D+ F + +DG+T A+ DV APG G + GGS+ Sbjct: 363 DIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQ 396
>SYN_YERPS (Q66CG7) Asparaginyl-tRNA synthetase (EC 6.1.1.22)| (Asparagine--tRNA ligase) (AsnRS) Length = 466 Score = 28.5 bits (62), Expect = 7.2 Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%) Frame = +2 Query: 206 DVVEFDVITGDDGRTKAS-DVTAPGGGALSGGSR 304 D+ F + +DG+T A+ DV APG G + GGS+ Sbjct: 362 DIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQ 395
>SYN_YERPE (P58697) Asparaginyl-tRNA synthetase (EC 6.1.1.22)| (Asparagine--tRNA ligase) (AsnRS) Length = 466 Score = 28.5 bits (62), Expect = 7.2 Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%) Frame = +2 Query: 206 DVVEFDVITGDDGRTKAS-DVTAPGGGALSGGSR 304 D+ F + +DG+T A+ DV APG G + GGS+ Sbjct: 362 DIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQ 395
>SYN_VIBVY (Q7MJS0) Asparaginyl-tRNA synthetase (EC 6.1.1.22)| (Asparagine--tRNA ligase) (AsnRS) Length = 466 Score = 28.5 bits (62), Expect = 7.2 Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%) Frame = +2 Query: 206 DVVEFDVITGDDGRTKAS-DVTAPGGGALSGGSR 304 D+ F + +DG+T A+ DV APG G + GGS+ Sbjct: 362 DIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQ 395
>SYN_VIBVU (Q8DAF0) Asparaginyl-tRNA synthetase (EC 6.1.1.22)| (Asparagine--tRNA ligase) (AsnRS) Length = 466 Score = 28.5 bits (62), Expect = 7.2 Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%) Frame = +2 Query: 206 DVVEFDVITGDDGRTKAS-DVTAPGGGALSGGSR 304 D+ F + +DG+T A+ DV APG G + GGS+ Sbjct: 362 DIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQ 395
>SYN_VIBCH (Q9KSF9) Asparaginyl-tRNA synthetase (EC 6.1.1.22)| (Asparagine--tRNA ligase) (AsnRS) Length = 466 Score = 28.5 bits (62), Expect = 7.2 Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%) Frame = +2 Query: 206 DVVEFDVITGDDGRTKAS-DVTAPGGGALSGGSR 304 D+ F + +DG+T A+ DV APG G + GGS+ Sbjct: 362 DIKAFYMRMNEDGKTVAAMDVLAPGIGEIIGGSQ 395
>SYN_SHEON (Q8EEZ1) Asparaginyl-tRNA synthetase (EC 6.1.1.22)| (Asparagine--tRNA ligase) (AsnRS) Length = 466 Score = 28.5 bits (62), Expect = 7.2 Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%) Frame = +2 Query: 206 DVVEFDVITGDDGRTKAS-DVTAPGGGALSGGSR 304 D+ F + +DG+T A+ DV APG G + GGS+ Sbjct: 362 DIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQ 395
>DDEF1_BOVIN (O97902) 130-kDa phosphatidylinositol 4,5-biphosphate-dependent ARF1| GTPase-activating protein (PIP2-dependent ARF1 GAP) (ADP-ribosylation factor-directed GTPase-activating protein 1) (ARF GTPase-activating protein 1) (Development and differe Length = 1129 Score = 28.1 bits (61), Expect = 9.4 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 2/34 (5%) Frame = -1 Query: 112 PLGDVEPLHGSLDPRPHLA--PPKTKDQNPSRKP 17 P+GD+ P G L P+P L PPK + + KP Sbjct: 957 PIGDLPPKPGELPPKPQLGDLPPKPQLADLPPKP 990 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 31,358,426 Number of Sequences: 219361 Number of extensions: 561990 Number of successful extensions: 2633 Number of sequences better than 10.0: 181 Number of HSP's better than 10.0 without gapping: 2504 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2583 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2453576370 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
