ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart58e12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1UDU2_ARATH (Q9FHD4) DUF26 domain-containing protein 2 precursor 36 0.031
2UDU1_ARATH (Q9FHD5) DUF26 domain-containing protein 1 precursor 31 1.3
3UDU3_ARATH (Q9FHD3) Hypothetical DUF26 domain-containing protein... 29 5.0
4BMP1_MOUSE (P98063) Bone morphogenetic protein 1 precursor (EC 3... 29 5.0

>UDU2_ARATH (Q9FHD4) DUF26 domain-containing protein 2 precursor|
          Length = 287

 Score = 36.2 bits (82), Expect = 0.031
 Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
 Frame = +1

Query: 151 SGVDAIGTYCAK---NGTSAET-QASIDQVLAALVPXXXXXXXXXXXXXXXXXXVWGLAQ 318
           S  D + T+C K   N TS  T   +++ +L+ L                    V G+  
Sbjct: 24  SDPDDMETFCMKSSRNTTSNTTYNKNLNTLLSTLSNQSSFANYYNLTTGLASDTVHGMFL 83

Query: 319 CRGDVPRQDCSLCLAAAAKEVASSC 393
           C GDV R  C+ C+  A  E+A +C
Sbjct: 84  CTGDVNRTTCNACVKNATIEIAKNC 108



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>UDU1_ARATH (Q9FHD5) DUF26 domain-containing protein 1 precursor|
          Length = 286

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +1

Query: 301 VWGLAQCRGDVPRQDCSLCLAAAAKEVASSC 393
           V G+  C GDV R  C+ C+  A  E+A +C
Sbjct: 79  VHGMFLCIGDVNRTTCNACVKNATIEIAKNC 109



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>UDU3_ARATH (Q9FHD3) Hypothetical DUF26 domain-containing protein 3 precursor|
          Length = 287

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 19/85 (22%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
 Frame = +1

Query: 151 SGVDAIGTYC---AKNGTSAET-QASIDQVLAALVPXXXXXXXXXXXXXXXXXXVWGLAQ 318
           S  D + T+C   ++N T   T   +++ +L+                      V+G+  
Sbjct: 28  SETDHMDTFCIDSSRNTTGNTTYNKNLNTMLSTFRNQSSIVNNYNLTTGLASDTVYGMFL 87

Query: 319 CRGDVPRQDCSLCLAAAAKEVASSC 393
           C GDV    C+ C+  A  E+  +C
Sbjct: 88  CTGDVNITTCNNCVKNATIEIVKNC 112



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>BMP1_MOUSE (P98063) Bone morphogenetic protein 1 precursor (EC 3.4.24.19)|
           (BMP-1) (Procollagen C-proteinase) (PCP) (Mammalian
           tolloid protein) (mTld)
          Length = 991

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = +3

Query: 318 VPRRRPASGLLALPRRGGQGGRVVLPR 398
           +P RRPA+GL  L  R G+GGR   P+
Sbjct: 23  LPARRPAAGLGRLHLRPGRGGRPGAPQ 49


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,825,766
Number of Sequences: 219361
Number of extensions: 284132
Number of successful extensions: 861
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 861
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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