ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart58e09 |
|---|---|
| Clone Library Name | barley_pub |
>MYBA2_ORYSA (Q4JL76) Myb-related protein MYBAS2| Length = 242 Score = 62.0 bits (149), Expect = 5e-10 Identities = 28/38 (73%), Positives = 31/38 (81%) Frame = +2 Query: 215 RKGPWTEKEDAQLVWLVRLLGERRWDFLAQVSGLRGGG 328 RKGPWTE+ED QLV VRL GERRWDF+A+VSGL G Sbjct: 9 RKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLNRTG 46
>MYBA1_ORYSA (Q53NK6) Myb-related protein MYBAS1| Length = 237 Score = 60.5 bits (145), Expect = 2e-09 Identities = 27/38 (71%), Positives = 31/38 (81%) Frame = +2 Query: 215 RKGPWTEKEDAQLVWLVRLLGERRWDFLAQVSGLRGGG 328 RKGPWTE+ED QLV VRL G+RRWDF+A+VSGL G Sbjct: 9 RKGPWTEQEDLQLVCTVRLFGDRRWDFVAKVSGLNRTG 46
>MYB48_ARATH (Q9LX82) Transcription factor MYB48 (Myb-related protein 48)| (AtMYB48) Length = 256 Score = 55.8 bits (133), Expect = 4e-08 Identities = 25/38 (65%), Positives = 29/38 (76%) Frame = +2 Query: 215 RKGPWTEKEDAQLVWLVRLLGERRWDFLAQVSGLRGGG 328 RKGPWTE+ED LV V L G+RRWDF+A+VSGL G Sbjct: 8 RKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTG 45
>MYB59_ARATH (Q4JL84) Transcription factor MYB59 (Myb-related protein 59)| (AtMYB59) Length = 235 Score = 55.5 bits (132), Expect = 5e-08 Identities = 25/38 (65%), Positives = 29/38 (76%) Frame = +2 Query: 215 RKGPWTEKEDAQLVWLVRLLGERRWDFLAQVSGLRGGG 328 RKGPWTE+ED LV V L G+RRWDF+A+VSGL G Sbjct: 9 RKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLNRTG 46
>GAM1_ORYSA (P93417) Transcription factor GAMYB (OsGAMyb)| Length = 553 Score = 38.1 bits (87), Expect = 0.009 Identities = 18/40 (45%), Positives = 24/40 (60%) Frame = +2 Query: 197 GGAMAARKGPWTEKEDAQLVWLVRLLGERRWDFLAQVSGL 316 GG +KGPWT EDA LV V+ GE W+ + + +GL Sbjct: 35 GGGPPLKKGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGL 74
>MYBA_MOUSE (P51960) Myb-related protein A (A-Myb)| Length = 751 Score = 37.0 bits (84), Expect = 0.019 Identities = 13/29 (44%), Positives = 22/29 (75%) Frame = +2 Query: 218 KGPWTEKEDAQLVWLVRLLGERRWDFLAQ 304 KGPWT++ED +++ LV+ G +RW +A+ Sbjct: 87 KGPWTKEEDQRVIELVQKYGPKRWSLIAK 115
>MYBA_CHICK (P52550) Myb-related protein A (A-Myb)| Length = 757 Score = 37.0 bits (84), Expect = 0.019 Identities = 13/29 (44%), Positives = 22/29 (75%) Frame = +2 Query: 218 KGPWTEKEDAQLVWLVRLLGERRWDFLAQ 304 KGPWT++ED +++ LV+ G +RW +A+ Sbjct: 87 KGPWTKEEDQRVIELVQKYGPKRWSLIAK 115
>MYBA_HUMAN (P10243) Myb-related protein A (A-Myb)| Length = 752 Score = 37.0 bits (84), Expect = 0.019 Identities = 13/29 (44%), Positives = 22/29 (75%) Frame = +2 Query: 218 KGPWTEKEDAQLVWLVRLLGERRWDFLAQ 304 KGPWT++ED +++ LV+ G +RW +A+ Sbjct: 87 KGPWTKEEDQRVIELVQKYGPKRWSLIAK 115
>MYB_CHICK (P01103) Myb proto-oncogene protein (C-myb)| Length = 641 Score = 36.6 bits (83), Expect = 0.025 Identities = 13/29 (44%), Positives = 22/29 (75%) Frame = +2 Query: 218 KGPWTEKEDAQLVWLVRLLGERRWDFLAQ 304 KGPWT++ED +++ LV+ G +RW +A+ Sbjct: 92 KGPWTKEEDQRVIELVQKYGPKRWSVIAK 120
>MYB_MOUSE (P06876) Myb proto-oncogene protein (C-myb)| Length = 636 Score = 36.6 bits (83), Expect = 0.025 Identities = 13/29 (44%), Positives = 22/29 (75%) Frame = +2 Query: 218 KGPWTEKEDAQLVWLVRLLGERRWDFLAQ 304 KGPWT++ED +++ LV+ G +RW +A+ Sbjct: 92 KGPWTKEEDQRVIELVQKYGPKRWSVIAK 120
>MYB_HUMAN (P10242) Myb proto-oncogene protein (C-myb)| Length = 640 Score = 36.6 bits (83), Expect = 0.025 Identities = 13/29 (44%), Positives = 22/29 (75%) Frame = +2 Query: 218 KGPWTEKEDAQLVWLVRLLGERRWDFLAQ 304 KGPWT++ED +++ LV+ G +RW +A+ Sbjct: 92 KGPWTKEEDQRVIELVQKYGPKRWSVIAK 120
>MYB_BOVIN (P46200) Myb proto-oncogene protein (C-myb)| Length = 640 Score = 36.6 bits (83), Expect = 0.025 Identities = 13/29 (44%), Positives = 22/29 (75%) Frame = +2 Query: 218 KGPWTEKEDAQLVWLVRLLGERRWDFLAQ 304 KGPWT++ED +++ LV+ G +RW +A+ Sbjct: 92 KGPWTKEEDQRVIELVQKYGPKRWSVIAK 120
>MYB_XENLA (Q08759) Myb protein| Length = 624 Score = 36.2 bits (82), Expect = 0.032 Identities = 13/29 (44%), Positives = 21/29 (72%) Frame = +2 Query: 218 KGPWTEKEDAQLVWLVRLLGERRWDFLAQ 304 KGPWT++ED +++ LV G +RW +A+ Sbjct: 89 KGPWTKEEDQRVIELVHKYGPKRWSVIAK 117
>MYB21_ARATH (Q9LK95) Transcription factor MYB21 (Myb-related protein 21)| (AtMYB21) (Myb homolog 3) (AtMyb3) Length = 226 Score = 35.4 bits (80), Expect = 0.055 Identities = 17/47 (36%), Positives = 26/47 (55%) Frame = +2 Query: 188 NNSGGAMAARKGPWTEKEDAQLVWLVRLLGERRWDFLAQVSGLRGGG 328 + S RKGPWT +ED L+ + G+ W+ LA+ +GL+ G Sbjct: 12 SGSSAEAEVRKGPWTMEEDLILINYIANHGDGVWNSLAKSAGLKRTG 58
>MYBB_MOUSE (P48972) Myb-related protein B (B-Myb)| Length = 704 Score = 35.4 bits (80), Expect = 0.055 Identities = 12/29 (41%), Positives = 22/29 (75%) Frame = +2 Query: 218 KGPWTEKEDAQLVWLVRLLGERRWDFLAQ 304 KGPWT++ED +++ LV+ G ++W +A+ Sbjct: 83 KGPWTKEEDQKVIELVKKYGTKQWTLIAK 111 Score = 32.7 bits (73), Expect = 0.36 Identities = 15/28 (53%), Positives = 18/28 (64%) Frame = +2 Query: 218 KGPWTEKEDAQLVWLVRLLGERRWDFLA 301 K WT +ED QL LVR G++ W FLA Sbjct: 31 KVKWTHEEDEQLRALVRQFGQQDWKFLA 58
>MYBB_CHICK (Q03237) Myb-related protein B (B-Myb)| Length = 686 Score = 35.4 bits (80), Expect = 0.055 Identities = 12/29 (41%), Positives = 22/29 (75%) Frame = +2 Query: 218 KGPWTEKEDAQLVWLVRLLGERRWDFLAQ 304 KGPWT++ED +++ LV+ G ++W +A+ Sbjct: 83 KGPWTKEEDQKVIELVKKYGTKQWTLIAK 111 Score = 33.5 bits (75), Expect = 0.21 Identities = 15/28 (53%), Positives = 18/28 (64%) Frame = +2 Query: 218 KGPWTEKEDAQLVWLVRLLGERRWDFLA 301 K WT++ED QL LVR G+ W FLA Sbjct: 31 KVKWTQEEDEQLKMLVRHYGQNDWKFLA 58
>MYBB_XENLA (P52551) Myb-related protein B (B-Myb) (Myb-related protein 1)| (XMYB1) Length = 743 Score = 35.4 bits (80), Expect = 0.055 Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%) Frame = +2 Query: 218 KGPWTEKEDAQLVWLVRLLGERRWDFLA-QVSGLRG 322 KGPWT++ED +++ LV+ G + W +A Q+ G G Sbjct: 83 KGPWTKEEDEKVIELVKKYGTKHWTLIAKQLRGRMG 118
>MYBA_XENLA (Q05935) Myb-related protein A (A-Myb) (XAMYB) (MYB-related protein| 2) (XMYB2) Length = 728 Score = 35.4 bits (80), Expect = 0.055 Identities = 12/29 (41%), Positives = 21/29 (72%) Frame = +2 Query: 218 KGPWTEKEDAQLVWLVRLLGERRWDFLAQ 304 KGPWT++ED +++ LV G ++W +A+ Sbjct: 86 KGPWTKEEDQRVIELVHKYGPKKWSIIAK 114
>MYBB_HUMAN (P10244) Myb-related protein B (B-Myb)| Length = 700 Score = 35.4 bits (80), Expect = 0.055 Identities = 12/29 (41%), Positives = 22/29 (75%) Frame = +2 Query: 218 KGPWTEKEDAQLVWLVRLLGERRWDFLAQ 304 KGPWT++ED +++ LV+ G ++W +A+ Sbjct: 83 KGPWTKEEDQKVIELVKKYGTKQWTLIAK 111 Score = 32.7 bits (73), Expect = 0.36 Identities = 15/28 (53%), Positives = 18/28 (64%) Frame = +2 Query: 218 KGPWTEKEDAQLVWLVRLLGERRWDFLA 301 K WT +ED QL LVR G++ W FLA Sbjct: 31 KVKWTHEEDEQLRALVRQFGQQDWKFLA 58
>MYB_DROME (P04197) Myb protein| Length = 657 Score = 35.0 bits (79), Expect = 0.072 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = +2 Query: 218 KGPWTEKEDAQLVWLVRLLGERRWDFLAQ 304 KGPWT ED ++ LVR G ++W +A+ Sbjct: 136 KGPWTRDEDDMVIKLVRNFGPKKWTLIAR 164
>MYB1_NEUCR (O13493) Myb-like DNA binding protein myb-1| Length = 324 Score = 35.0 bits (79), Expect = 0.072 Identities = 15/35 (42%), Positives = 23/35 (65%) Frame = +2 Query: 215 RKGPWTEKEDAQLVWLVRLLGERRWDFLAQVSGLR 319 R+GPW+ ED +L+ LV+ LG W +A++ G R Sbjct: 8 RRGPWSAGEDQRLIKLVKDLGPGNWVNVARILGTR 42
>MYB98_ARATH (Q9S7L2) Transcription factor MYB98 (Myb-related protein 98)| (AtMYB98) Length = 427 Score = 35.0 bits (79), Expect = 0.072 Identities = 15/30 (50%), Positives = 19/30 (63%) Frame = +2 Query: 218 KGPWTEKEDAQLVWLVRLLGERRWDFLAQV 307 KG WT +ED L+ LV G R+W +AQV Sbjct: 217 KGQWTAEEDRVLIQLVEKYGLRKWSHIAQV 246
>MYBC_MAIZE (P10290) Anthocyanin regulatory C1 protein| Length = 273 Score = 34.3 bits (77), Expect = 0.12 Identities = 16/38 (42%), Positives = 22/38 (57%) Frame = +2 Query: 215 RKGPWTEKEDAQLVWLVRLLGERRWDFLAQVSGLRGGG 328 ++G WT KED L V+ GE +W + Q +GLR G Sbjct: 13 KRGAWTSKEDDALAAYVKAHGEGKWREVPQKAGLRRCG 50
>ODO1_PETHY (Q50EX6) ODORANT1 protein (MYB-like protein ODO1)| Length = 294 Score = 33.5 bits (75), Expect = 0.21 Identities = 13/41 (31%), Positives = 25/41 (60%) Frame = +2 Query: 206 MAARKGPWTEKEDAQLVWLVRLLGERRWDFLAQVSGLRGGG 328 + +KGPWT +ED +L+ + G+ W + +++GL+ G Sbjct: 10 LGVKKGPWTAEEDKKLISFILTNGQCCWRAVPKLAGLKRCG 50
>MYB_AVIMB (P01104) Transforming protein Myb| Length = 382 Score = 33.1 bits (74), Expect = 0.27 Identities = 12/29 (41%), Positives = 21/29 (72%) Frame = +2 Query: 218 KGPWTEKEDAQLVWLVRLLGERRWDFLAQ 304 KGPWT++ED +++ V+ G +RW +A+ Sbjct: 21 KGPWTKEEDQRVIEHVQKYGPKRWSDIAK 49
>MYB4_ORYSA (Q7XBH4) Myb-related protein Myb4 (OsMyb4) (Transcription factor| RLTR1) Length = 257 Score = 32.7 bits (73), Expect = 0.36 Identities = 15/37 (40%), Positives = 21/37 (56%) Frame = +2 Query: 206 MAARKGPWTEKEDAQLVWLVRLLGERRWDFLAQVSGL 316 M +KGPWT +ED LV ++ G W L + +GL Sbjct: 10 MGLKKGPWTPEEDKVLVAHIQRHGHGNWRALPKQAGL 46
>MYB38_MAIZE (P20025) Myb-related protein Zm38| Length = 255 Score = 32.3 bits (72), Expect = 0.47 Identities = 14/33 (42%), Positives = 21/33 (63%) Frame = +2 Query: 218 KGPWTEKEDAQLVWLVRLLGERRWDFLAQVSGL 316 +G WT++ED +LV +R GE W L + +GL Sbjct: 14 RGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGL 46
>MB3R1_ARATH (Q9S7G7) Myb-related protein 3R-1 (Plant c-MYB-like protein 1)| (Protein PC-MYB1) (PC-MYB1) Length = 776 Score = 32.3 bits (72), Expect = 0.47 Identities = 11/29 (37%), Positives = 20/29 (68%) Frame = +2 Query: 218 KGPWTEKEDAQLVWLVRLLGERRWDFLAQ 304 KGPW+++ED ++ LV G ++W ++Q Sbjct: 87 KGPWSKEEDNTIIDLVEKYGPKKWSTISQ 115
>MYB4_ARATH (Q9SZP1) Transcription repressor MYB4 (Myb-related protein 4)| (AtMYB4) Length = 282 Score = 32.3 bits (72), Expect = 0.47 Identities = 14/33 (42%), Positives = 21/33 (63%) Frame = +2 Query: 218 KGPWTEKEDAQLVWLVRLLGERRWDFLAQVSGL 316 KG WT++ED +LV ++ GE W L + +GL Sbjct: 14 KGAWTKEEDERLVAYIKAHGEGCWRSLPKAAGL 46
>MYBH_DICDI (P34127) Myb-like protein (Fragment)| Length = 451 Score = 30.8 bits (68), Expect = 1.4 Identities = 11/28 (39%), Positives = 19/28 (67%) Frame = +2 Query: 218 KGPWTEKEDAQLVWLVRLLGERRWDFLA 301 KG WT+ ED +++ LV+ G ++W +A Sbjct: 201 KGAWTKDEDDKVIELVKTYGPKKWSDIA 228 Score = 28.1 bits (61), Expect = 8.8 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = +2 Query: 218 KGPWTEKEDAQLVWLVRLLGERRWDFLAQ 304 KG WT +ED L+ V L ++ W +A+ Sbjct: 149 KGKWTSEEDQILIKAVNLHNQKNWKKIAE 177
>MYB1_HORVU (P20026) Myb-related protein Hv1| Length = 267 Score = 30.4 bits (67), Expect = 1.8 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +2 Query: 218 KGPWTEKEDAQLVWLVRLLGERRWDFLAQVSGL 316 KG WT++ED +L ++ GE W L + +GL Sbjct: 14 KGAWTKEEDDRLTAYIKAHGEGCWRSLPKAAGL 46
>FR1OP_MACFA (Q4R7V3) FGFR1 oncogene partner| Length = 379 Score = 30.0 bits (66), Expect = 2.3 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 4/44 (9%) Frame = -3 Query: 348 GSGWID----HPPPRKPET*AKKSQRRSPSKRTSHTSCASSFSV 229 G G +D HPPP+ PE K S + +PSK+ ++ + S SV Sbjct: 145 GEGALDLSDVHPPPKSPE--GKTSAQTTPSKKANNEANQSDTSV 186
>MYB2_PHYPA (P80073) Myb-related protein Pp2| Length = 421 Score = 30.0 bits (66), Expect = 2.3 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = +2 Query: 215 RKGPWTEKEDAQLVWLVRLLGERRWDFLAQVSGL 316 R+GPWT +ED +LV + G W + +++GL Sbjct: 13 RRGPWTSEEDQKLVSHITNNGLSCWRAIPKLAGL 46
>VE2_HPV47 (P22420) Regulatory protein E2| Length = 506 Score = 29.6 bits (65), Expect = 3.0 Identities = 17/58 (29%), Positives = 30/58 (51%) Frame = -3 Query: 411 ENAPEGQGERKRR*LMATGRRGSGWIDHPPPRKPET*AKKSQRRSPSKRTSHTSCASS 238 + +P Q K+ T RRG G R+P+T ++S+ RS S+ +S T +++ Sbjct: 228 DTSPRRQSINKQSQQTETKRRGYGRRPSSRTRRPQTHQRRSRSRSRSRSSSQTHSSTT 285
>DNB2_ADE07 (P04497) Early E2A DNA-binding protein| Length = 517 Score = 29.6 bits (65), Expect = 3.0 Identities = 19/59 (32%), Positives = 26/59 (44%) Frame = -3 Query: 405 APEGQGERKRR*LMATGRRGSGWIDHPPPRKPET*AKKSQRRSPSKRTSHTSCASSFSV 229 A G + R T RG G HPPPR P+ +S P KR ++ S+ S+ Sbjct: 2 ASRGGNQSSDRQREHTPERGMGSASHPPPR-PDRSPSQSPPPLPPKRNTYRRVGSNSSI 59
>SNPC4_MOUSE (Q8BP86) snRNA-activating protein complex subunit 4 (SNAPc subunit| 4) (snRNA-activating protein complex 190 kDa subunit) (SNAPc 190 kDa subunit) Length = 1333 Score = 28.5 bits (62), Expect = 6.7 Identities = 13/37 (35%), Positives = 18/37 (48%) Frame = +2 Query: 215 RKGPWTEKEDAQLVWLVRLLGERRWDFLAQVSGLRGG 325 +KG W KE+ QL+ L+ G W +A R G Sbjct: 452 KKGRWNAKEEQQLIQLIEKYGVGHWARIASELPHRSG 488
>MYB1_MAIZE (P20024) Myb-related protein Zm1| Length = 340 Score = 28.1 bits (61), Expect = 8.8 Identities = 11/33 (33%), Positives = 19/33 (57%) Frame = +2 Query: 218 KGPWTEKEDAQLVWLVRLLGERRWDFLAQVSGL 316 +G WT +ED +L+ ++ G W L + +GL Sbjct: 16 RGSWTPQEDMRLIAYIQKHGHTNWRALPKQAGL 48
>GATA_LEIXX (Q6AEE8) Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.-)| (Glu-ADT subunit A) Length = 515 Score = 28.1 bits (61), Expect = 8.8 Identities = 18/62 (29%), Positives = 29/62 (46%) Frame = +2 Query: 233 EKEDAQLVWLVRLLGERRWDFLAQVSGLRGGG*SIQPDPLRPVAINHLLFLSPCPSGAFS 412 E DA + + + GE+ A++ G R G + P PVAI +L + PS + S Sbjct: 35 EAVDADVHAFLHVAGEKALRTAAEIDGRRASGEKLGPFAGVPVAIKDVLATNDMPSTSGS 94 Query: 413 AV 418 + Sbjct: 95 KI 96 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,489,272 Number of Sequences: 219361 Number of extensions: 715313 Number of successful extensions: 1675 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 1607 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1673 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2286875994 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
