Clone Information

BLAST Search Result

Clone Name	bart58e08
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RS3A_ARATH (Q42262) 40S ribosomal protein S3a	199	4e-51
2	RS3A_ORYSA (P49397) 40S ribosomal protein S3a (CYC07 protein)	197	8e-51
3	RS3A_HELAN (P49198) 40S ribosomal protein S3a	194	9e-50
4	RS3A_BRARA (P49396) 40S ribosomal protein S3a (S phase-specific ...	194	1e-49
5	RS3A_CATRO (P33444) 40S ribosomal protein S3a (CYC07 protein)	190	2e-48
6	RS3A_TORRU (Q9XEG7) 40S ribosomal protein S3a	162	3e-40
7	RS3A_FELCA (P61246) 40S ribosomal protein S3a (Fragment)	159	3e-39
8	RS3A_RAT (P49242) 40S ribosomal protein S3a (V-fos transformatio...	159	3e-39
9	RS3A_MOUSE (P97351) 40S ribosomal protein S3a	159	3e-39
10	RS3A_HUMAN (P61247) 40S ribosomal protein S3a	159	3e-39
11	RS3A_GECJA (Q6DV02) 40S ribosomal protein S3a	159	3e-39
12	RS3A_EIMTE (O43999) 40S ribosomal protein S3a (EtS3a)	159	3e-39
13	RS3A_BOVIN (Q56JV9) 40S ribosomal protein S3a	159	3e-39
14	RS3A_XENTR (Q642T2) 40S ribosomal protein S3a	158	6e-39
15	RS3A_XENLA (Q801S3) 40S ribosomal protein S3a	158	6e-39
16	RS3A_ORYLA (O73813) 40S ribosomal protein S3a (V-fos transformat...	158	6e-39
17	RS3A_BRARE (Q6PBY1) 40S ribosomal protein S3a	157	1e-38
18	RS3A_MACFA (Q4R4Z6) 40S ribosomal protein S3a	157	1e-38
19	RS3A_OPHHA (Q98TX2) 40S ribosomal protein S3a	156	2e-38
20	RS3A_TETNG (Q4T8S6) 40S ribosomal protein S3a	156	3e-38
21	RS3A_CANAL (P40910) 40S ribosomal protein S3aE (S1)	153	2e-37
22	RS3A_YEAST (P33442) 40S ribosomal protein S1-A (RP10A)	152	5e-37
23	RS3A_APLCA (P49395) 40S ribosomal protein S3a (Lysine-rich prote...	151	7e-37
24	RS3B_YEAST (P23248) 40S ribosomal protein S1-B (RP10B)	151	9e-37
25	RS3A_ANOGA (P52813) 40S ribosomal protein S3a (C3 protein)	149	4e-36
26	RS3A_CAEEL (P48154) 40S ribosomal protein S3a	143	2e-34
27	RS3A_DROME (P55830) 40S ribosomal protein S3a (C3 protein)	142	3e-34
28	RS3B_SCHPO (O94438) 40S ribosomal protein S3aE-B (S1-A)	140	2e-33
29	RS3A_SCHPO (Q09781) 40S ribosomal protein S3aE-A (S1-A)	139	5e-33
30	RS3A_PYRHO (O57803) 30S ribosomal protein S3Ae	57	2e-08
31	RS3A_METAC (Q8TKI9) 30S ribosomal protein S3Ae	57	3e-08
32	RS3A_METTH (O27630) 30S ribosomal protein S3Ae	57	3e-08
33	RS3A_PYRFU (Q8TZE1) 30S ribosomal protein S3Ae	56	5e-08
34	RS3A_PYRAB (Q9V2K7) 30S ribosomal protein S3Ae	55	7e-08
35	RS3A_METMA (Q8Q0F2) 30S ribosomal protein S3Ae	55	1e-07
36	RS3A_ARCFU (O27964) 30S ribosomal protein S3Ae	54	1e-07
37	RS3A_PYRAE (Q8ZT21) 30S ribosomal protein S3Ae	54	1e-07
38	RS3A_METMP (Q6LZG0) 30S ribosomal protein S3Ae	54	1e-07
39	RS3A_PYRKO (Q5JGM4) 30S ribosomal protein S3Ae	54	3e-07
40	RS3A_HALMA (Q5V296) 30S ribosomal protein S3Ae	52	6e-07
41	RS3A_METKA (Q8TVD1) 30S ribosomal protein S3Ae	52	7e-07
42	RS3A_SULTO (Q975F8) 30S ribosomal protein S3Ae	50	2e-06
43	RS3A_SULAC (Q4JB17) 30S ribosomal protein S3Ae	48	1e-05
44	RS3A_SULSO (Q9UXD4) 30S ribosomal protein S3Ae	46	4e-05
45	RS3A_HALSA (Q9HRA5) 30S ribosomal protein S3Ae	40	0.002
46	RS3A_THEVO (Q978Z2) 30S ribosomal protein S3Ae	39	0.006
47	MNR2_YEAST (P35724) Manganese resistance protein MNR2	30	2.3
48	LAT_HUMAN (O43561) Linker for activation of T-cells family membe...	30	3.0
49	RECF_SYNPX (Q7U4L8) DNA replication and repair protein recF	30	3.9
50	HEM0_BRARE (Q9YHT4) 5-aminolevulinate synthase, erythroid-specif...	29	6.7
51	RS3A_NANEQ (Q74N14) 30S ribosomal protein S3Ae	29	6.7
52	VG78_ICHV1 (Q00167) Hypothetical gene 78 zinc-binding protein	28	8.7
53	FD4_DROME (P32028) Fork head domain protein FD4	28	8.7
54	AMPN_STRLI (Q11010) Aminopeptidase N (EC 3.4.11.2) (Lysyl aminop...	28	8.7

>RS3A_ARATH (Q42262) 40S ribosomal protein S3a|
          Length = 261

 Score =  199 bits (505), Expect = 4e-51
 Identities = 97/108 (89%), Positives = 101/108 (93%)
 Frame = +3

Query: 138 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 317
           AVDPF+KK WYD+KAP  FT+RNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDED 
Sbjct: 19  AVDPFSKKDWYDVKAPGSFTNRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDN 78

Query: 318 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIEAHVDV 461
           AYRKIRLRAEDVQG NVLT FWGMDFTTD LRSLV+KWQTLIEAHVDV
Sbjct: 79  AYRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTLIEAHVDV 126

to top

>RS3A_ORYSA (P49397) 40S ribosomal protein S3a (CYC07 protein)|
          Length = 261

 Score =  197 bits (502), Expect = 8e-51
 Identities = 96/107 (89%), Positives = 99/107 (92%)
 Frame = +3

Query: 141 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 320
           VDPF KK WYDIKAP +F  RN+GKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA
Sbjct: 20  VDPFAKKDWYDIKAPSVFNVRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 79

Query: 321 YRKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIEAHVDV 461
           YRKIRLRAEDVQG NVLTNFWGM FTTD LRSLV+KWQTLIEAHVDV
Sbjct: 80  YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDV 126

to top

>RS3A_HELAN (P49198) 40S ribosomal protein S3a|
          Length = 259

 Score =  194 bits (493), Expect = 9e-50
 Identities = 94/108 (87%), Positives = 100/108 (92%)
 Frame = +3

Query: 138 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 317
           A DPF+KK WYDIKAP LF +RNVGKTLV+RTQGTKIASEGLKHRVFEVSLADLQNDED 
Sbjct: 19  AADPFSKKDWYDIKAPSLFITRNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEDH 78

Query: 318 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIEAHVDV 461
           +YRKIRLRAEDVQG NVLTNFWGMD TTD LRSLV+KWQ+LIEAHVDV
Sbjct: 79  SYRKIRLRAEDVQGKNVLTNFWGMDVTTDKLRSLVKKWQSLIEAHVDV 126

to top

>RS3A_BRARA (P49396) 40S ribosomal protein S3a (S phase-specific protein|
           BIS289)
          Length = 261

 Score =  194 bits (492), Expect = 1e-49
 Identities = 95/107 (88%), Positives = 97/107 (90%)
 Frame = +3

Query: 141 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 320
           VDPF KK WYDIKAP  FT RNVGKTLVSRTQGTKIASEGLKHRVFEVSLADL  DEDQA
Sbjct: 20  VDPFAKKDWYDIKAPSSFTHRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLNKDEDQA 79

Query: 321 YRKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIEAHVDV 461
           YRKIRLRAEDVQG NVLT FWGMDFTTD LRSLV+KWQTLIE+HVDV
Sbjct: 80  YRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTLIESHVDV 126

to top

>RS3A_CATRO (P33444) 40S ribosomal protein S3a (CYC07 protein)|
          Length = 259

 Score =  190 bits (482), Expect = 2e-48
 Identities = 90/108 (83%), Positives = 99/108 (91%)
 Frame = +3

Query: 138 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 317
           A DPF KK WYDIKAP +F+ RNVGKTLV+RTQGTKIASEGL+HRVFE+SLADLQ DED 
Sbjct: 19  AADPFAKKDWYDIKAPSVFSVRNVGKTLVTRTQGTKIASEGLEHRVFEISLADLQGDEDH 78

Query: 318 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIEAHVDV 461
           ++RKIRLRAED+QG NVLTNFWGMDFTTD LRSLVRKWQ+LIEAHVDV
Sbjct: 79  SFRKIRLRAEDIQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIEAHVDV 126

to top

>RS3A_TORRU (Q9XEG7) 40S ribosomal protein S3a|
          Length = 247

 Score =  162 bits (411), Expect = 3e-40
 Identities = 82/107 (76%), Positives = 89/107 (83%)
 Frame = +3

Query: 141 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 320
           VDPF+KK WYDIKAP        G+    RT GTKIAS+GL  RVFEVSLADLQNDEDQA
Sbjct: 20  VDPFSKKDWYDIKAPPRSRRARSGRRC-HRTAGTKIASDGLNFRVFEVSLADLQNDEDQA 78

Query: 321 YRKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIEAHVDV 461
           +RKI+LRAEDVQG NVLTNFWGMDFTTD LRSLVRKWQ+LI+AHVDV
Sbjct: 79  FRKIKLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIQAHVDV 125

to top

>RS3A_FELCA (P61246) 40S ribosomal protein S3a (Fragment)|
          Length = 260

 Score =  159 bits (402), Expect = 3e-39
 Identities = 78/107 (72%), Positives = 90/107 (84%)
 Frame = +3

Query: 141 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 320
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 18  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 76

Query: 321 YRKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIEAHVDV 461
           +RK +L  EDVQG N LTNF GMD T D + S+V+KWQT+IEAHVDV
Sbjct: 77  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDV 123

to top

>RS3A_RAT (P49242) 40S ribosomal protein S3a (V-fos transformation effector|
           protein) [Contains: 40S ribosomal protein S3b]
          Length = 263

 Score =  159 bits (402), Expect = 3e-39
 Identities = 78/107 (72%), Positives = 90/107 (84%)
 Frame = +3

Query: 141 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 320
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 321 YRKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIEAHVDV 461
           +RK +L  EDVQG N LTNF GMD T D + S+V+KWQT+IEAHVDV
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDV 126

to top

>RS3A_MOUSE (P97351) 40S ribosomal protein S3a|
          Length = 263

 Score =  159 bits (402), Expect = 3e-39
 Identities = 78/107 (72%), Positives = 90/107 (84%)
 Frame = +3

Query: 141 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 320
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 321 YRKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIEAHVDV 461
           +RK +L  EDVQG N LTNF GMD T D + S+V+KWQT+IEAHVDV
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDV 126

to top

>RS3A_HUMAN (P61247) 40S ribosomal protein S3a|
          Length = 263

 Score =  159 bits (402), Expect = 3e-39
 Identities = 78/107 (72%), Positives = 90/107 (84%)
 Frame = +3

Query: 141 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 320
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 321 YRKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIEAHVDV 461
           +RK +L  EDVQG N LTNF GMD T D + S+V+KWQT+IEAHVDV
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDV 126

to top

>RS3A_GECJA (Q6DV02) 40S ribosomal protein S3a|
          Length = 263

 Score =  159 bits (402), Expect = 3e-39
 Identities = 78/107 (72%), Positives = 90/107 (84%)
 Frame = +3

Query: 141 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 320
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 321 YRKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIEAHVDV 461
           +RK +L  EDVQG N LTNF GMD T D + S+V+KWQT+IEAHVDV
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDV 126

to top

>RS3A_EIMTE (O43999) 40S ribosomal protein S3a (EtS3a)|
          Length = 263

 Score =  159 bits (402), Expect = 3e-39
 Identities = 78/107 (72%), Positives = 90/107 (84%)
 Frame = +3

Query: 141 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 320
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 321 YRKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIEAHVDV 461
           +RK +L  EDVQG N LTNF GMD T D + S+V+KWQT+IEAHVDV
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMFSMVKKWQTMIEAHVDV 126

to top

>RS3A_BOVIN (Q56JV9) 40S ribosomal protein S3a|
          Length = 263

 Score =  159 bits (402), Expect = 3e-39
 Identities = 78/107 (72%), Positives = 90/107 (84%)
 Frame = +3

Query: 141 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 320
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 321 YRKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIEAHVDV 461
           +RK +L  EDVQG N LTNF GMD T D + S+V+KWQT+IEAHVDV
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDV 126

to top

>RS3A_XENTR (Q642T2) 40S ribosomal protein S3a|
          Length = 263

 Score =  158 bits (400), Expect = 6e-39
 Identities = 78/107 (72%), Positives = 90/107 (84%)
 Frame = +3

Query: 141 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 320
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 321 YRKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIEAHVDV 461
           +RK +L  EDVQG N LTNF GMD T D + S+V+KWQT+IEAHVDV
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDV 126

to top

>RS3A_XENLA (Q801S3) 40S ribosomal protein S3a|
          Length = 263

 Score =  158 bits (400), Expect = 6e-39
 Identities = 78/107 (72%), Positives = 90/107 (84%)
 Frame = +3

Query: 141 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 320
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 321 YRKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIEAHVDV 461
           +RK +L  EDVQG N LTNF GMD T D + S+V+KWQT+IEAHVDV
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDV 126

to top

>RS3A_ORYLA (O73813) 40S ribosomal protein S3a (V-fos transformation effector|
           protein)
          Length = 265

 Score =  158 bits (400), Expect = 6e-39
 Identities = 78/107 (72%), Positives = 90/107 (84%)
 Frame = +3

Query: 141 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 320
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 321 YRKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIEAHVDV 461
           +RK +L  EDVQG N LTNF GMD T D + S+V+KWQT+IEAHVDV
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDV 126

to top

>RS3A_BRARE (Q6PBY1) 40S ribosomal protein S3a|
          Length = 266

 Score =  157 bits (397), Expect = 1e-38
 Identities = 77/107 (71%), Positives = 90/107 (84%)
 Frame = +3

Query: 141 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 320
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGT+IAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTRIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 321 YRKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIEAHVDV 461
           +RK +L  EDVQG N LTNF GMD T D + S+V+KWQT+IEAHVDV
Sbjct: 80  FRKFKLVTEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDV 126

to top

>RS3A_MACFA (Q4R4Z6) 40S ribosomal protein S3a|
          Length = 263

 Score =  157 bits (397), Expect = 1e-38
 Identities = 77/107 (71%), Positives = 89/107 (83%)
 Frame = +3

Query: 141 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 320
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK  VFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGHVFEVSLADLQNDE-VA 79

Query: 321 YRKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIEAHVDV 461
           +RK +L  EDVQG N LTNF GMD T D + S+V+KWQT+IEAHVDV
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDV 126

to top

>RS3A_OPHHA (Q98TX2) 40S ribosomal protein S3a|
          Length = 263

 Score =  156 bits (395), Expect = 2e-38
 Identities = 76/107 (71%), Positives = 89/107 (83%)
 Frame = +3

Query: 141 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 320
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 321 YRKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIEAHVDV 461
           +RK +L  EDVQG N L NF GMD T D + S+V+KWQT+IEAH+DV
Sbjct: 80  FRKFKLITEDVQGKNCLINFHGMDLTRDKMCSMVKKWQTMIEAHIDV 126

to top

>RS3A_TETNG (Q4T8S6) 40S ribosomal protein S3a|
          Length = 265

 Score =  156 bits (394), Expect = 3e-38
 Identities = 76/107 (71%), Positives = 90/107 (84%)
 Frame = +3

Query: 141 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 320
           VDPF+KK WYD+KAP +F  RN+GKTLV+RTQGT+IAS+GLK RV+EVSLADLQNDE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTRIASDGLKGRVYEVSLADLQNDE-VA 79

Query: 321 YRKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIEAHVDV 461
           +RK +L  EDVQG N LTNF GMD T D + S+V+KWQT+IEAHVDV
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDV 126

to top

>RS3A_CANAL (P40910) 40S ribosomal protein S3aE (S1)|
          Length = 255

 Score =  153 bits (387), Expect = 2e-37
 Identities = 72/107 (67%), Positives = 90/107 (84%)
 Frame = +3

Query: 141 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 320
           VDPFT+K W+DIKAP  F +RNVGKTL++R+ G K A++GLK RVFEV LADLQ  ED +
Sbjct: 20  VDPFTRKDWFDIKAPTTFENRNVGKTLINRSTGLKNAADGLKGRVFEVCLADLQGSEDHS 79

Query: 321 YRKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIEAHVDV 461
           YRKI+LR ++VQG N+LTNF G+DFT+D LRSLVRKWQ+L+EA+V V
Sbjct: 80  YRKIKLRVDEVQGKNLLTNFHGLDFTSDKLRSLVRKWQSLVEANVTV 126

to top

>RS3A_YEAST (P33442) 40S ribosomal protein S1-A (RP10A)|
          Length = 254

 Score =  152 bits (383), Expect = 5e-37
 Identities = 73/107 (68%), Positives = 89/107 (83%)
 Frame = +3

Query: 141 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 320
           VDPFT+K+W+DIKAP  F +RNVGKTLV+++ G K AS+ LK RV EV LADLQ  ED +
Sbjct: 20  VDPFTRKEWFDIKAPSTFENRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHS 79

Query: 321 YRKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIEAHVDV 461
           +RKI+LR ++VQG N+LTNF GMDFTTD LRS+VRKWQTLIEA+V V
Sbjct: 80  FRKIKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTV 126

to top

>RS3A_APLCA (P49395) 40S ribosomal protein S3a (Lysine-rich protein KRP-A)|
          Length = 264

 Score =  151 bits (382), Expect = 7e-37
 Identities = 76/107 (71%), Positives = 89/107 (83%)
 Frame = +3

Query: 141 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 320
           VDPFTKK+WYD+KAP +F  R +GKTLV+R+QGTKIAS+ LK RVFEVSLADLQNDE   
Sbjct: 21  VDPFTKKEWYDVKAPSMFAVRQIGKTLVTRSQGTKIASDNLKGRVFEVSLADLQNDE-VT 79

Query: 321 YRKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIEAHVDV 461
           +RK +L AE+VQG NVLTNF GM  T D L S+V+KWQTLIEA+VDV
Sbjct: 80  FRKFKLIAEEVQGRNVLTNFSGMSLTRDKLCSMVKKWQTLIEANVDV 126

to top

>RS3B_YEAST (P23248) 40S ribosomal protein S1-B (RP10B)|
          Length = 254

 Score =  151 bits (381), Expect = 9e-37
 Identities = 72/107 (67%), Positives = 89/107 (83%)
 Frame = +3

Query: 141 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 320
           VDPFT+K+W+DIKAP  F +RNVGKTLV+++ G K AS+ LK RV EV LADLQ  ED +
Sbjct: 20  VDPFTRKEWFDIKAPSTFENRNVGKTLVNKSTGLKNASDALKGRVVEVCLADLQGSEDHS 79

Query: 321 YRKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIEAHVDV 461
           +RK++LR ++VQG N+LTNF GMDFTTD LRS+VRKWQTLIEA+V V
Sbjct: 80  FRKVKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTV 126

to top

>RS3A_ANOGA (P52813) 40S ribosomal protein S3a (C3 protein)|
          Length = 268

 Score =  149 bits (375), Expect = 4e-36
 Identities = 75/109 (68%), Positives = 88/109 (80%), Gaps = 2/109 (1%)
 Frame = +3

Query: 141 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQN--DED 314
           VDPFT+K WYD+KAP +F +R  GKTLV+RTQGTKIAS+GLK RVFEVSLADLQN  D +
Sbjct: 21  VDPFTRKDWYDVKAPNMFKNRQSGKTLVNRTQGTKIASDGLKGRVFEVSLADLQNEPDAE 80

Query: 315 QAYRKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIEAHVDV 461
           +++RK +L AE V G +VLTNF GM  TTD LRS+V KWQTLIE  VDV
Sbjct: 81  RSFRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVNKWQTLIECSVDV 129

to top

>RS3A_CAEEL (P48154) 40S ribosomal protein S3a|
          Length = 256

 Score =  143 bits (361), Expect = 2e-34
 Identities = 73/108 (67%), Positives = 85/108 (78%)
 Frame = +3

Query: 138 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 317
           AVDPF++K+WYDIKAP +F +R VGKTL++RTQGTKIASEGLK RVFEVSL DL N E  
Sbjct: 18  AVDPFSRKEWYDIKAPNMFNTRQVGKTLINRTQGTKIASEGLKGRVFEVSLGDLNNSEAD 77

Query: 318 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIEAHVDV 461
            +RK +L AEDVQG NVLTNF  M  T D L S+V+KW TLIEA+  V
Sbjct: 78  -FRKFKLIAEDVQGKNVLTNFHAMSMTHDKLCSIVKKWHTLIEANTAV 124

to top

>RS3A_DROME (P55830) 40S ribosomal protein S3a (C3 protein)|
          Length = 267

 Score =  142 bits (359), Expect = 3e-34
 Identities = 72/108 (66%), Positives = 87/108 (80%), Gaps = 2/108 (1%)
 Frame = +3

Query: 141 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDED-- 314
           VDPF++K WYD+KAP +F +R +GKTLV+RTQG +IAS+ LK RVFEVSLADLQ D D  
Sbjct: 21  VDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPE 80

Query: 315 QAYRKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIEAHVD 458
           +++RK RL AEDVQ  NVL NF GMD TTD  RS+V+KWQTLIEA V+
Sbjct: 81  RSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVE 128

to top

>RS3B_SCHPO (O94438) 40S ribosomal protein S3aE-B (S1-A)|
          Length = 251

 Score =  140 bits (353), Expect = 2e-33
 Identities = 66/103 (64%), Positives = 83/103 (80%)
 Frame = +3

Query: 141 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 320
           VDPF++K+WYDIKAP  F  +NVGKTLV+RT G K A++ LK R+ EVSLADLQ DE+ A
Sbjct: 20  VDPFSRKEWYDIKAPAFFEVKNVGKTLVNRTAGLKNANDSLKGRILEVSLADLQKDEEHA 79

Query: 321 YRKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIEA 449
           +RK++LR ED+QG + LT+F G+  T+D LRSLVRKWQT IEA
Sbjct: 80  FRKVKLRVEDIQGKSCLTSFNGLSITSDKLRSLVRKWQTTIEA 122

to top

>RS3A_SCHPO (Q09781) 40S ribosomal protein S3aE-A (S1-A)|
          Length = 251

 Score =  139 bits (349), Expect = 5e-33
 Identities = 65/104 (62%), Positives = 83/104 (79%)
 Frame = +3

Query: 141 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 320
           VDPF++K WYDIKAP  F  +NVGKTLV+RT G K A++ LK R+ EVSLADLQ DE+ +
Sbjct: 20  VDPFSRKDWYDIKAPAFFEVKNVGKTLVNRTAGLKNANDSLKGRILEVSLADLQKDEEHS 79

Query: 321 YRKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIEAH 452
           +RK++LR ED+QG + LT+F G D T+D LRSLVRKWQ+ IEA+
Sbjct: 80  FRKVKLRVEDIQGKSCLTSFNGFDMTSDKLRSLVRKWQSTIEAN 123

to top

>RS3A_PYRHO (O57803) 30S ribosomal protein S3Ae|
          Length = 199

 Score = 57.0 bits (136), Expect = 2e-08
 Identities = 37/103 (35%), Positives = 50/103 (48%)
 Frame = +3

Query: 138 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 317
           A D +  KQWY I AP  F    VG T            E + +RV EV+L D+  D  +
Sbjct: 11  AKDKWKLKQWYIIYAPDFFGGVEVGLTPADDP-------EKVMNRVVEVTLKDITGDFTK 63

Query: 318 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIE 446
            + K+  +  DV+G N  T F GM      +RSLVR+  T I+
Sbjct: 64  GHVKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRRTTRID 106

to top

>RS3A_METAC (Q8TKI9) 30S ribosomal protein S3Ae|
          Length = 203

 Score = 56.6 bits (135), Expect = 3e-08
 Identities = 34/107 (31%), Positives = 56/107 (52%)
 Frame = +3

Query: 141 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 320
           +D +  K+WY+I+AP+      VG T+             L  R  E ++ +L ND  + 
Sbjct: 10  LDGWKSKEWYNIEAPVYLNRAIVGNTMAGDPSL-------LVGRNVETTVGELTNDMTKN 62

Query: 321 YRKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIEAHVDV 461
             K+ LR  +V G    T+  G + TTD +RS+V++  + I+A+VDV
Sbjct: 63  NTKVILRINNVVGDIATTDLMGHELTTDYIRSIVKRQTSRIDANVDV 109

to top

>RS3A_METTH (O27630) 30S ribosomal protein S3Ae|
          Length = 195

 Score = 56.6 bits (135), Expect = 3e-08
 Identities = 34/106 (32%), Positives = 56/106 (52%)
 Frame = +3

Query: 144 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 323
           D + +K+WY IK+P LF    +G      T  ++     LK RV E ++ +L  D  + Y
Sbjct: 11  DTWKEKKWYVIKSPKLFGENEIG------TTPSRDPDFLLKRRV-EATMRELTGDFSKQY 63

Query: 324 RKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIEAHVDV 461
            K++ + + V G    T F G   TTD +RS++R+  + ++A V V
Sbjct: 64  VKLKFQIDSVAGSEATTRFIGHQVTTDYVRSMIRRGTSRVDAPVIV 109

to top

>RS3A_PYRFU (Q8TZE1) 30S ribosomal protein S3Ae|
          Length = 198

 Score = 55.8 bits (133), Expect = 5e-08
 Identities = 36/101 (35%), Positives = 50/101 (49%)
 Frame = +3

Query: 144 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 323
           D +  KQWY I AP  F    VG T            E + +RV EV+L D+  D  +++
Sbjct: 11  DKWKLKQWYIIYAPDFFGGVEVGLTPADDP-------EKVLNRVVEVTLKDVTGDFTKSH 63

Query: 324 RKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIE 446
            K+  +  DV+G N  T F GM      +RSLVR+  T I+
Sbjct: 64  VKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRKTTRID 104

to top

>RS3A_PYRAB (Q9V2K7) 30S ribosomal protein S3Ae|
          Length = 199

 Score = 55.5 bits (132), Expect = 7e-08
 Identities = 37/103 (35%), Positives = 50/103 (48%)
 Frame = +3

Query: 138 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 317
           A D +  KQWY I AP  F    VG T            E + +RV EV+L D+  D  +
Sbjct: 10  AKDKWKLKQWYVIYAPDFFGGVEVGLTPADDP-------EKVLNRVVEVTLKDITGDFLK 62

Query: 318 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIE 446
            + K+  +  DV+G N  T F GM      +RSLVR+  T I+
Sbjct: 63  GHVKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRRTTRID 105

to top

>RS3A_METMA (Q8Q0F2) 30S ribosomal protein S3Ae|
          Length = 204

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 34/107 (31%), Positives = 55/107 (51%)
 Frame = +3

Query: 141 VDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQA 320
           +D +  K+WY+I+AP       VG T+             L  R  E ++ +L ND  + 
Sbjct: 10  LDGWKSKEWYNIEAPAYLNRVIVGTTMAGDPSL-------LVGRNVETTVGELTNDMTKN 62

Query: 321 YRKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIEAHVDV 461
             K+ LR  +V G    T+  G + TTD +RS+V++  + I+A+VDV
Sbjct: 63  NTKVILRVNNVVGDIATTDLMGHELTTDYVRSIVKRQTSRIDANVDV 109

to top

>RS3A_ARCFU (O27964) 30S ribosomal protein S3Ae|
          Length = 211

 Score = 54.3 bits (129), Expect = 1e-07
 Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
 Frame = +3

Query: 144 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQND--EDQ 317
           D +T K+W+ + AP  F    +G+T       +K+       R  E +LA+L ND     
Sbjct: 12  DKWTLKKWFTLIAPEYFGMAELGETPAD--DASKVVG-----RTVETTLAELTNDYSNQN 64

Query: 318 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIEAHVDV 461
            Y+K+  +   V G N  T FW  + T + L SL R+  + IE  VDV
Sbjct: 65  TYKKLIFKVYRVAGDNAYTKFWRFELTREYLNSLTRRRTSKIEDIVDV 112

to top

>RS3A_PYRAE (Q8ZT21) 30S ribosomal protein S3Ae|
          Length = 221

 Score = 54.3 bits (129), Expect = 1e-07
 Identities = 32/106 (30%), Positives = 54/106 (50%)
 Frame = +3

Query: 144 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 323
           DP+  K+W+ + AP       +G   ++     +  ++ L  R  EVSL D+  D     
Sbjct: 20  DPWALKKWFSVYAPSY-----LGGVFLAEVPANE--AQKLLMRTLEVSLYDITKDISHLP 72

Query: 324 RKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIEAHVDV 461
            K++ +   V+G+  LT F G++ T D +RSLVRK  + + A  +V
Sbjct: 73  IKLKFQIHRVEGLKALTRFKGLELTRDYIRSLVRKGTSKVTAITEV 118

to top

>RS3A_METMP (Q6LZG0) 30S ribosomal protein S3Ae|
          Length = 225

 Score = 54.3 bits (129), Expect = 1e-07
 Identities = 34/108 (31%), Positives = 57/108 (52%)
 Frame = +3

Query: 138 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 317
           A D +  K WYDI     +T ++ G  ++ +T     A+  L  R+ E+SL DL N+  +
Sbjct: 15  AKDTWKSKVWYDI-----YTPQSFGGDVIGQTPANDPAN--LIGRISEISLRDLTNEHSK 67

Query: 318 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIEAHVDV 461
              ++  + + V G N  + F G D T + L+S VR+ ++ I A V+V
Sbjct: 68  HMTRMYFKVDGVSGNNATSQFVGHDTTREYLKSQVRRRRSKINAIVEV 115

to top

>RS3A_PYRKO (Q5JGM4) 30S ribosomal protein S3Ae|
          Length = 200

 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 33/103 (32%), Positives = 49/103 (47%)
 Frame = +3

Query: 138 AVDPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 317
           A D +  K+WY + AP  F S+ +G T            E +  RV E +L DL  D  +
Sbjct: 13  AKDKWKMKEWYIVYAPDFFGSKEIGLTPADDP-------EKVIGRVIETTLKDLTGDFTK 65

Query: 318 AYRKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIE 446
            + K+  +  DV+G N  T F G       +RSLVR+  T ++
Sbjct: 66  GHVKLYFQVYDVKGQNAYTKFKGHTLARSYIRSLVRRRTTRVD 108

to top

>RS3A_HALMA (Q5V296) 30S ribosomal protein S3Ae|
          Length = 213

 Score = 52.4 bits (124), Expect = 6e-07
 Identities = 30/102 (29%), Positives = 50/102 (49%)
 Frame = +3

Query: 156 KKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAYRKIR 335
           +K+WY ++AP  F    +GKT            + +  R  E +L +L ND  +   K+ 
Sbjct: 12  QKRWYTVQAPEQFDREVLGKTPAEEP-------DKVLGRTIETTLGELTNDASENNTKLT 64

Query: 336 LRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIEAHVDV 461
            +  +V   +  T F   + T D LRSLVR+  + +EA++ V
Sbjct: 65  FKINEVASDSAYTEFIRHELTRDYLRSLVRRGSSKVEAYITV 106

to top

>RS3A_METKA (Q8TVD1) 30S ribosomal protein S3Ae|
          Length = 211

 Score = 52.0 bits (123), Expect = 7e-07
 Identities = 34/106 (32%), Positives = 52/106 (49%)
 Frame = +3

Query: 144 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 323
           D +  K WY I AP +F +  VG+T            E +  RV E +L D+ +D  + +
Sbjct: 4   DKWKDKVWYTILAPDMFDNVEVGETPADDP-------EKVIGRVLETTLGDVLDDITKHH 56

Query: 324 RKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIEAHVDV 461
            K+  R  DV+G    + F G     D +RSLVR+  + I+  +DV
Sbjct: 57  IKVFFRIYDVEGTTAYSKFEGHRLMRDYVRSLVRRGTSRIDGVIDV 102

to top

>RS3A_SULTO (Q975F8) 30S ribosomal protein S3Ae|
          Length = 193

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 35/106 (33%), Positives = 54/106 (50%)
 Frame = +3

Query: 144 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 323
           D +  K+W+ I AP  F     G+ ++  T     A++ L  +V E +L DL  D    Y
Sbjct: 9   DKWKLKKWFTIVAPKTF-----GEVVLGTTPAFD-ANQALNRKV-ETTLYDLTGDYSLVY 61

Query: 324 RKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIEAHVDV 461
             +  R   V+G  +LT F G + + D +RSLVR+  + I+A  DV
Sbjct: 62  VHLYFRVIGVEGDRLLTRFAGHELSRDYIRSLVRRKSSKIDAITDV 107

to top

>RS3A_SULAC (Q4JB17) 30S ribosomal protein S3Ae|
          Length = 197

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
 Frame = +3

Query: 144 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 323
           D +  K+WY I AP +F     G+ L+  T    I ++ L  ++ EV+L DL  D +  Y
Sbjct: 11  DKWKLKKWYVITAPKVF-----GEALLGSTPAYDI-NKALSRKI-EVTLYDLTGDYNLVY 63

Query: 324 RKIRLRA-EDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIEAHVDV 461
             +  +   ++ G  + T F+G + + D +RSLVR+  + I A VDV
Sbjct: 64  IHLYFKILGNISGDKLSTIFYGHELSRDYIRSLVRRKSSKINAVVDV 110

to top

>RS3A_SULSO (Q9UXD4) 30S ribosomal protein S3Ae|
          Length = 208

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
 Frame = +3

Query: 144 DPFTKKQWYDIKAPLLFTSRNVGKTL---VSRTQGTKIASEGLKHRVFEVSLADLQNDED 314
           D +  K+WY +  P  F   ++G T    +++T G ++          E +L DL  D  
Sbjct: 10  DKWKMKKWYSVITPKAFGEVSLGSTPAYDITQTIGRRV----------ETTLYDLTGDFS 59

Query: 315 QAYRKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIEAHVDV 461
           Q Y  +  +    +G  ++T F G + + D LRSL+R+  + I +  DV
Sbjct: 60  QVYVHLYFKIIGNEGDRLITRFVGHELSRDYLRSLIRRKSSKINSIFDV 108

to top

>RS3A_HALSA (Q9HRA5) 30S ribosomal protein S3Ae|
          Length = 206

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 27/102 (26%), Positives = 48/102 (47%)
 Frame = +3

Query: 156 KKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAYRKIR 335
           +K+WY + AP  F    +G+TL           + +  R  + +L+D+++  D    K+ 
Sbjct: 12  EKRWYTVLAPEEFDRAELGETLAEEP-------DQVYDRTIQAALSDVRDGGDNNI-KLT 63

Query: 336 LRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIEAHVDV 461
            + +DV   +  T F   + T D  RSLVR+  + +   V V
Sbjct: 64  FQIDDVGSDSASTQFVQAELTRDYQRSLVRRGSSKVAVTVTV 105

to top

>RS3A_THEVO (Q978Z2) 30S ribosomal protein S3Ae|
          Length = 215

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 28/106 (26%), Positives = 48/106 (45%)
 Frame = +3

Query: 144 DPFTKKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAY 323
           + + +K WY ++AP    S+ V   L          S  + +RV EV +++L  +  ++ 
Sbjct: 12  EKWKEKVWYTVEAPPYLGSKEVSVALGE-------DSNSMVNRVVEVPISELTGNFKKSN 64

Query: 324 RKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKWQTLIEAHVDV 461
            K   R  + +G    T F G     D +R LVR+ +  I+   DV
Sbjct: 65  EKALFRITNCEGTKCKTIFIGHYIGDDYIRRLVRRRKERIDIIEDV 110

to top

>MNR2_YEAST (P35724) Manganese resistance protein MNR2|
          Length = 969

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 18/68 (26%), Positives = 31/68 (45%)
 Frame = +3

Query: 189  LFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAYRKIRLRAEDVQGMNV 368
            + +S N  + L+SR+    +A          + +  + ND +    KI +    V  MNV
Sbjct: 871  MVSSLNHYEKLLSRSHSNYLAQ-------INIDMTKVNNDMNDVLGKITILGTIVLPMNV 923

Query: 369  LTNFWGMD 392
            +T  WGM+
Sbjct: 924  ITGLWGMN 931

to top

>LAT_HUMAN (O43561) Linker for activation of T-cells family member 1 (36 kDa|
           phospho-tyrosine adapter protein) (pp36) (p36-38)
          Length = 262

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = -1

Query: 253 EAILVPCVLDTRVLPTLRLVKSSGALMSYHCFLVNGS 143
           EAILVPCVL   +LP L ++ +    +  HC  + GS
Sbjct: 3   EAILVPCVLGLLLLPILAMLMA----LCVHCHRLPGS 35

to top

>RECF_SYNPX (Q7U4L8) DNA replication and repair protein recF|
          Length = 365

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
 Frame = -2

Query: 357 LAHPQHGV*SSCRPGPHRSEDQLEILQTP----GASGPLR 250
           L  P+     SCR GPHR E  L++  TP    G+SG  R
Sbjct: 242 LQRPEEERLGSCRVGPHRDEVSLQLGGTPARRFGSSGQQR 281

to top

>HEM0_BRARE (Q9YHT4) 5-aminolevulinate synthase, erythroid-specific,|
           mitochondrial precursor (EC 2.3.1.37) (5-aminolevulinic
           acid synthase) (Delta-aminolevulinate synthase)
           (Delta-ALA synthetase) (ALAS-E)
          Length = 583

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -1

Query: 202 RLVKSSGALMSYHCFLVNGSTAFFLLPFLP 113
           RL +  GAL+   CF+ N ST F L   LP
Sbjct: 240 RLHQKDGALVFSSCFVANDSTLFTLAKMLP 269

to top

>RS3A_NANEQ (Q74N14) 30S ribosomal protein S3Ae|
          Length = 198

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 22/92 (23%), Positives = 40/92 (43%)
 Frame = +3

Query: 156 KKQWYDIKAPLLFTSRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAYRKIR 335
           +K W+ IKAP +F    +G+T   +        E +  R  E+++A + N+      K  
Sbjct: 12  RKIWFTIKAPAIFNEVELGETPAYK-------PEQVIGRRVELNMALVTNNYQLQNYKGI 64

Query: 336 LRAEDVQGMNVLTNFWGMDFTTDXLRSLVRKW 431
            +   V+G    T   G+        S+++KW
Sbjct: 65  FKITKVEGTTAKTELEGIKM----YESIIQKW 92

to top

>VG78_ICHV1 (Q00167) Hypothetical gene 78 zinc-binding protein|
          Length = 400

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -2

Query: 255 LRQSWYPVSWTRGSCRRCG 199
           L   WYP S TRG+C  CG
Sbjct: 143 LGADWYPKSRTRGTCGYCG 161

to top

>FD4_DROME (P32028) Fork head domain protein FD4|
          Length = 372

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -3

Query: 461 HIDMSLNEGLPLPHKRPELVSGEIH 387
           H+  SL  G+PLPH  P  +SG  H
Sbjct: 167 HMPNSLGPGVPLPHVMPASMSGADH 191

to top

>AMPN_STRLI (Q11010) Aminopeptidase N (EC 3.4.11.2) (Lysyl aminopeptidase)|
           (Lys-AP) (Alanine aminopeptidase)
          Length = 857

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 18/41 (43%), Positives = 24/41 (58%)
 Frame = +3

Query: 297 LQNDEDQAYRKIRLRAEDVQGMNVLTNFWGMDFTTDXLRSL 419
           L ND+D +Y K+RL   D Q + V+T   G DFT    R+L
Sbjct: 536 LLNDDDLSYAKVRL---DEQSLAVVTEHLG-DFTESLPRAL 572


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,983,454
Number of Sequences: 219361
Number of extensions: 966347
Number of successful extensions: 2848
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 2773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2821
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2968155324
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result