ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart58e05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK106358.1| Oryza sativa (japonica cultivar-group) cDNA clon... 398 e-108
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 188 1e-44
3gb|AC134233.3| Oryza sativa (japonica cultivar-group) chromosome... 188 1e-44
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 188 1e-44
5dbj|AK103088.1| Oryza sativa (japonica cultivar-group) cDNA clon... 167 4e-38
6dbj|AK106420.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
7gb|AE004755.1| Pseudomonas aeruginosa PAO1, section 316 of 529 o... 48 0.026
8ref|XM_515380.1| PREDICTED: Pan troglodytes LOC459125 (LOC459125... 44 0.41
9emb|AL731628.4|OSJN00282 Oryza sativa genomic DNA, chromosome 4,... 44 0.41
10ref|NM_001029883.1| Homo sapiens similar to cDNA sequence BC0270... 44 0.41
11gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 44 0.41
12dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.41
13gb|AC105398.3| Homo sapiens BAC clone RP11-656O12 from 2, comple... 44 0.41
14gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 44 0.41
15emb|BX572600.1| Rhodopseudomonas palustris CGA009 complete genom... 42 1.6
16emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genom... 42 1.6
17gb|AC105081.4| Homo sapiens chromosome 8, clone CTC-788C1, compl... 42 1.6
18dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 1.6
19dbj|AP003351.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 42 1.6
20ref|XM_476770.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.4
21gb|AC149084.5| Mus musculus BAC clone RP23-173A12 from chromosom... 40 6.4
22gb|AC145549.3| Mus musculus BAC clone RP23-21M23 from chromosome... 40 6.4
23gb|AC132957.3| Mus musculus BAC clone RP23-149E9 from chromosome... 40 6.4
24emb|Z92967.1|CEF14D1 Caenorhabditis elegans Cosmid F14D1, comple... 40 6.4
25emb|CR855994.1| Wallaby DNA sequence from clone MEKBa-69G12, com... 40 6.4
26gb|AY286456.1| Mycobacterium gadium strain ATCC 27726 RecA (recA... 40 6.4
27emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 6.4
28emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete ... 40 6.4
29emb|BX640430.1| Bordetella parapertussis strain 12822, complete ... 40 6.4
30emb|BX640419.1| Bordetella pertussis strain Tohama I, complete g... 40 6.4
31gb|DQ397556.1| Cenarchaeum symbiosum clone C13A10, complete sequ... 40 6.4
32gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 6.4
33gb|AE012435.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 6.4
34gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 6.4
35dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001 40 6.4
36dbj|AB207867.1| Escherichia coli transposon Tn2610, complete seq... 40 6.4
37gb|AF261825.2| Salmonella enterica subsp. enterica serovar Typhi... 40 6.4
38gb|CP000249.1| Frankia sp. CcI3, complete genome 40 6.4
39gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 40 6.4
40gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 6.4
41gb|AF386507.1|AF386507 Streptomyces lavendulae complestatin bios... 40 6.4
42gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 6.4
43gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 6.4
44dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
45dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome 40 6.4
46gb|AC073218.6| Homo sapiens BAC clone RP11-529E15 from 2, comple... 40 6.4
47dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.4
48gb|AF240624.1|AF240624 Homo sapiens clone 11qtel_2072draft_c seq... 40 6.4
49dbj|AP004670.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
50dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 6.4
51dbj|AB103506.1| Serratia marcescens tnpR, blaTEM, rmtB, orfA gen... 40 6.4
52ref|XM_308622.2| Anopheles gambiae str. PEST ENSANGP00000007551 ... 40 6.4
53emb|CT025832.1| Acinetobacter baumannii str. AYE. Genomics of Mu... 40 6.4
54gb|AF071555.1|AF071555 Salmonella typhimurium DT104 antibiotic r... 40 6.4
55emb|X14716.1|ACNIFA2 Azorhizobium caulinodans nifA gene for nitr... 40 6.4
56emb|X08014.1|ACNIFA Azorhizobium caulinodans nifA gene 40 6.4
57gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 6.4
58dbj|AP003039.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 6.4
59gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 6.4
60gb|AC170878.4| Mus musculus BAC clone RP24-226F17 from chromosom... 40 6.4
61emb|AL663091.13| Mouse DNA sequence from clone RP23-392P11 on ch... 40 6.4 
>dbj|AK106358.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-A09, full
           insert sequence
          Length = 1661

 Score =  398 bits (201), Expect = e-108
 Identities = 339/385 (88%)
 Strand = Plus / Plus

                                                                       
Query: 90  gggcgtcgaggagatcgtcatcgccggcgccgggctcgccggactcgccacggccctggg 149
           |||||||||||  |||||||||||||||||||| ||||| || ||||| ||||| || ||
Sbjct: 114 gggcgtcgagggcatcgtcatcgccggcgccggcctcgcggggctcgcgacggcgctcgg 173

                                                                       
Query: 150 gttgcacaggaaaggggttcggagcgtggtgctggagtcgtcggcgacgctgcgggcgtc 209
           ||| ||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 174 gttacacaggaaaggggtgaggagcctggtgctggagtcgtcggcgacgctgcgggcgtc 233

                                                                       
Query: 210 ggggtacgcgttcaacacatggaccaacgccttccgcgcgctcgatgccctcggcgtcgg 269
            |||| ||||||||  |||||||| |||||||||||||||||||| ||||| || |||||
Sbjct: 234 cgggttcgcgttcacgacatggacgaacgccttccgcgcgctcgacgcccttggtgtcgg 293

                                                                       
Query: 270 ggacaagatcagggagcaccacctgctctacgagaggctggtggccttctctgcatccac 329
            ||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||
Sbjct: 294 cgacaagatcagggagcatcatctgctctacgagaggctgttggccttctctgcatccac 353

                                                                       
Query: 330 aggcgaggctgccgcggaagtgagcctaaagatgcagggcaaaagcggtcctcacgaaat 389
            || ||| |||||||| |  |||| ||||||||||| || ||||| || || || || ||
Sbjct: 354 gggagagcctgccgcgaagttgagtctaaagatgcaagggaaaagtggaccgcatgagat 413

                                                                       
Query: 390 tcgttgcgtgaagcgcaacttcctgctggagacgctggagaacgagctgccggagggcac 449
           ||| |||||||||||||||||||| |||||||| ||||||||||| |||||||| |||||
Sbjct: 414 tcggtgcgtgaagcgcaacttcctactggagactctggagaacgaactgccggaaggcac 473

                                    
Query: 450 catcaggtactcctcaaagatcgtc 474
           |||||||| ||| || |||||||||
Sbjct: 474 catcaggttctcttccaagatcgtc 498
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  188 bits (95), Expect = 1e-44
 Identities = 137/151 (90%)
 Strand = Plus / Plus

                                                                           
Query: 156     caggaaaggggttcggagcgtggtgctggagtcgtcggcgacgctgcgggcgtcggggta 215
               ||||||||||||  ||||| |||||||||||||||||||||||||||||||||| |||| 
Sbjct: 2946684 caggaaaggggtgaggagcctggtgctggagtcgtcggcgacgctgcgggcgtccgggtt 2946743

                                                                           
Query: 216     cgcgttcaacacatggaccaacgccttccgcgcgctcgatgccctcggcgtcggggacaa 275
               ||||||||  |||||||| |||||||||||||||||||| ||||| || ||||| |||||
Sbjct: 2946744 cgcgttcacgacatggacgaacgccttccgcgcgctcgacgcccttggtgtcggcgacaa 2946803

                                              
Query: 276     gatcagggagcaccacctgctctacgagagg 306
               |||||||||||| || |||||||||||||||
Sbjct: 2946804 gatcagggagcatcatctgctctacgagagg 2946834



 Score =  121 bits (61), Expect = 2e-24
 Identities = 97/109 (88%)
 Strand = Plus / Plus

                                                                           
Query: 170     ggagcgtggtgctggagtcgtcggcgacgctgcgggcgtcggggtacgcgttcaacacat 229
               ||||||||||||||||||||||| ||||||||||| |||| ||||  ||||||| |||||
Sbjct: 2943674 ggagcgtggtgctggagtcgtcgccgacgctgcggacgtccgggttggcgttcatcacat 2943733

                                                                
Query: 230     ggaccaacgccttccgcgcgctcgatgccctcggcgtcggggacaagat 278
               |||| ||||||||||||||||| |||||||| || || || ||||||||
Sbjct: 2943734 ggacgaacgccttccgcgcgcttgatgcccttggggtaggcgacaagat 2943782



 Score =  111 bits (56), Expect = 2e-21
 Identities = 74/80 (92%)
 Strand = Plus / Plus

                                                                           
Query: 395     gcgtgaagcgcaacttcctgctggagacgctggagaacgagctgccggagggcaccatca 454
               ||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||
Sbjct: 2976098 gcgtgaagcgcaacttcctacgagagacgctggagaacgagctgccggagggcaccatca 2976157

                                   
Query: 455     ggtactcctcaaagatcgtc 474
               ||| ||| || |||||||||
Sbjct: 2976158 ggttctcttccaagatcgtc 2976177



 Score =  109 bits (55), Expect = 8e-21
 Identities = 79/87 (90%)
 Strand = Plus / Plus

                                                                           
Query: 388     attcgttgcgtgaagcgcaacttcctgctggagacgctggagaacgagctgccggagggc 447
               ||||| |||||||||||||||||||| |||||||| ||||||||||| |||||||| |||
Sbjct: 2947510 attcggtgcgtgaagcgcaacttcctactggagactctggagaacgaactgccggaaggc 2947569

                                          
Query: 448     accatcaggtactcctcaaagatcgtc 474
               |||||||||| ||| || |||||||||
Sbjct: 2947570 accatcaggttctcttccaagatcgtc 2947596



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Plus

                                                                           
Query: 90      gggcgtcgaggagatcgtcatcgccggcgccgggctcgccggactcgccacggccctggg 149
               |||||||||||  |||||||||||||||||||| ||||| || ||||| ||||| || ||
Sbjct: 2946505 gggcgtcgagggcatcgtcatcgccggcgccggcctcgcggggctcgcgacggcgctcgg 2946564

                         
Query: 150     gttgcacagg 159
               ||| ||||||
Sbjct: 2946565 gttacacagg 2946574



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                           
Query: 304     aggctggtggccttctctgcatccacaggcgaggctgccgcggaagtgagcctaaagatg 363
               |||||| ||||||||||||||||||| || ||| |||||||| |  |||| |||||||||
Sbjct: 2947307 aggctgttggccttctctgcatccacgggagagcctgccgcgaagttgagtctaaagatg 2947366

                          
Query: 364     cagggcaaaag 374
               || || |||||
Sbjct: 2947367 caagggaaaag 2947377



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                      
Query: 99      ggagatcgtcatcgccggcgccgggctcgccggactcgc 137
               |||||||||||||||||||||||| |||||||| |||||
Sbjct: 2943520 ggagatcgtcatcgccggcgccggcctcgccgggctcgc 2943558



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                         
Query: 304     aggctggtggccttctctgcatccac 329
               ||||||||||||||||||||||||||
Sbjct: 2975690 aggctggtggccttctctgcatccac 2975715



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                     
Query: 177     ggtgctggagtcgtcggcgacgctgcgggcgtcggggt 214
               |||||||||||||||| ||  ||| |||||||||||||
Sbjct: 2940419 ggtgctggagtcgtcgccggagctccgggcgtcggggt 2940456



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                     
Query: 177     ggtgctggagtcgtcggcgacgctgcgggcgtcggggt 214
               |||||||||||||||| ||  ||| |||||||||||||
Sbjct: 2916789 ggtgctggagtcgtcgccggagctccgggcgtcggggt 2916826
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>gb|AC134233.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0016I15, complete sequence
          Length = 166282

 Score =  188 bits (95), Expect = 1e-44
 Identities = 137/151 (90%)
 Strand = Plus / Plus

                                                                         
Query: 156   caggaaaggggttcggagcgtggtgctggagtcgtcggcgacgctgcgggcgtcggggta 215
             ||||||||||||  ||||| |||||||||||||||||||||||||||||||||| |||| 
Sbjct: 84171 caggaaaggggtgaggagcctggtgctggagtcgtcggcgacgctgcgggcgtccgggtt 84230

                                                                         
Query: 216   cgcgttcaacacatggaccaacgccttccgcgcgctcgatgccctcggcgtcggggacaa 275
             ||||||||  |||||||| |||||||||||||||||||| ||||| || ||||| |||||
Sbjct: 84231 cgcgttcacgacatggacgaacgccttccgcgcgctcgacgcccttggtgtcggcgacaa 84290

                                            
Query: 276   gatcagggagcaccacctgctctacgagagg 306
             |||||||||||| || |||||||||||||||
Sbjct: 84291 gatcagggagcatcatctgctctacgagagg 84321



 Score =  121 bits (61), Expect = 2e-24
 Identities = 97/109 (88%)
 Strand = Plus / Plus

                                                                         
Query: 170   ggagcgtggtgctggagtcgtcggcgacgctgcgggcgtcggggtacgcgttcaacacat 229
             ||||||||||||||||||||||| ||||||||||| |||| ||||  ||||||| |||||
Sbjct: 81161 ggagcgtggtgctggagtcgtcgccgacgctgcggacgtccgggttggcgttcatcacat 81220

                                                              
Query: 230   ggaccaacgccttccgcgcgctcgatgccctcggcgtcggggacaagat 278
             |||| ||||||||||||||||| |||||||| || || || ||||||||
Sbjct: 81221 ggacgaacgccttccgcgcgcttgatgcccttggggtaggcgacaagat 81269



 Score =  111 bits (56), Expect = 2e-21
 Identities = 74/80 (92%)
 Strand = Plus / Plus

                                                                          
Query: 395    gcgtgaagcgcaacttcctgctggagacgctggagaacgagctgccggagggcaccatca 454
              ||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||
Sbjct: 113585 gcgtgaagcgcaacttcctacgagagacgctggagaacgagctgccggagggcaccatca 113644

                                  
Query: 455    ggtactcctcaaagatcgtc 474
              ||| ||| || |||||||||
Sbjct: 113645 ggttctcttccaagatcgtc 113664



 Score =  109 bits (55), Expect = 8e-21
 Identities = 79/87 (90%)
 Strand = Plus / Plus

                                                                         
Query: 388   attcgttgcgtgaagcgcaacttcctgctggagacgctggagaacgagctgccggagggc 447
             ||||| |||||||||||||||||||| |||||||| ||||||||||| |||||||| |||
Sbjct: 84997 attcggtgcgtgaagcgcaacttcctactggagactctggagaacgaactgccggaaggc 85056

                                        
Query: 448   accatcaggtactcctcaaagatcgtc 474
             |||||||||| ||| || |||||||||
Sbjct: 85057 accatcaggttctcttccaagatcgtc 85083



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Plus

                                                                         
Query: 90    gggcgtcgaggagatcgtcatcgccggcgccgggctcgccggactcgccacggccctggg 149
             |||||||||||  |||||||||||||||||||| ||||| || ||||| ||||| || ||
Sbjct: 83992 gggcgtcgagggcatcgtcatcgccggcgccggcctcgcggggctcgcgacggcgctcgg 84051

                       
Query: 150   gttgcacagg 159
             ||| ||||||
Sbjct: 84052 gttacacagg 84061



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                         
Query: 304   aggctggtggccttctctgcatccacaggcgaggctgccgcggaagtgagcctaaagatg 363
             |||||| ||||||||||||||||||| || ||| |||||||| |  |||| |||||||||
Sbjct: 84794 aggctgttggccttctctgcatccacgggagagcctgccgcgaagttgagtctaaagatg 84853

                        
Query: 364   cagggcaaaag 374
             || || |||||
Sbjct: 84854 caagggaaaag 84864



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                    
Query: 99    ggagatcgtcatcgccggcgccgggctcgccggactcgc 137
             |||||||||||||||||||||||| |||||||| |||||
Sbjct: 81007 ggagatcgtcatcgccggcgccggcctcgccgggctcgc 81045



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                        
Query: 304    aggctggtggccttctctgcatccac 329
              ||||||||||||||||||||||||||
Sbjct: 113177 aggctggtggccttctctgcatccac 113202



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 177   ggtgctggagtcgtcggcgacgctgcgggcgtcggggt 214
             |||||||||||||||| ||  ||| |||||||||||||
Sbjct: 77906 ggtgctggagtcgtcgccggagctccgggcgtcggggt 77943



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 177   ggtgctggagtcgtcggcgacgctgcgggcgtcggggt 214
             |||||||||||||||| ||  ||| |||||||||||||
Sbjct: 54276 ggtgctggagtcgtcgccggagctccgggcgtcggggt 54313
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  188 bits (95), Expect = 1e-44
 Identities = 137/151 (90%)
 Strand = Plus / Plus

                                                                           
Query: 156     caggaaaggggttcggagcgtggtgctggagtcgtcggcgacgctgcgggcgtcggggta 215
               ||||||||||||  ||||| |||||||||||||||||||||||||||||||||| |||| 
Sbjct: 2946795 caggaaaggggtgaggagcctggtgctggagtcgtcggcgacgctgcgggcgtccgggtt 2946854

                                                                           
Query: 216     cgcgttcaacacatggaccaacgccttccgcgcgctcgatgccctcggcgtcggggacaa 275
               ||||||||  |||||||| |||||||||||||||||||| ||||| || ||||| |||||
Sbjct: 2946855 cgcgttcacgacatggacgaacgccttccgcgcgctcgacgcccttggtgtcggcgacaa 2946914

                                              
Query: 276     gatcagggagcaccacctgctctacgagagg 306
               |||||||||||| || |||||||||||||||
Sbjct: 2946915 gatcagggagcatcatctgctctacgagagg 2946945



 Score =  121 bits (61), Expect = 2e-24
 Identities = 97/109 (88%)
 Strand = Plus / Plus

                                                                           
Query: 170     ggagcgtggtgctggagtcgtcggcgacgctgcgggcgtcggggtacgcgttcaacacat 229
               ||||||||||||||||||||||| ||||||||||| |||| ||||  ||||||| |||||
Sbjct: 2943785 ggagcgtggtgctggagtcgtcgccgacgctgcggacgtccgggttggcgttcatcacat 2943844

                                                                
Query: 230     ggaccaacgccttccgcgcgctcgatgccctcggcgtcggggacaagat 278
               |||| ||||||||||||||||| |||||||| || || || ||||||||
Sbjct: 2943845 ggacgaacgccttccgcgcgcttgatgcccttggggtaggcgacaagat 2943893



 Score =  111 bits (56), Expect = 2e-21
 Identities = 74/80 (92%)
 Strand = Plus / Plus

                                                                           
Query: 395     gcgtgaagcgcaacttcctgctggagacgctggagaacgagctgccggagggcaccatca 454
               ||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||
Sbjct: 2976209 gcgtgaagcgcaacttcctacgagagacgctggagaacgagctgccggagggcaccatca 2976268

                                   
Query: 455     ggtactcctcaaagatcgtc 474
               ||| ||| || |||||||||
Sbjct: 2976269 ggttctcttccaagatcgtc 2976288



 Score =  109 bits (55), Expect = 8e-21
 Identities = 79/87 (90%)
 Strand = Plus / Plus

                                                                           
Query: 388     attcgttgcgtgaagcgcaacttcctgctggagacgctggagaacgagctgccggagggc 447
               ||||| |||||||||||||||||||| |||||||| ||||||||||| |||||||| |||
Sbjct: 2947621 attcggtgcgtgaagcgcaacttcctactggagactctggagaacgaactgccggaaggc 2947680

                                          
Query: 448     accatcaggtactcctcaaagatcgtc 474
               |||||||||| ||| || |||||||||
Sbjct: 2947681 accatcaggttctcttccaagatcgtc 2947707



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Plus

                                                                           
Query: 90      gggcgtcgaggagatcgtcatcgccggcgccgggctcgccggactcgccacggccctggg 149
               |||||||||||  |||||||||||||||||||| ||||| || ||||| ||||| || ||
Sbjct: 2946616 gggcgtcgagggcatcgtcatcgccggcgccggcctcgcggggctcgcgacggcgctcgg 2946675

                         
Query: 150     gttgcacagg 159
               ||| ||||||
Sbjct: 2946676 gttacacagg 2946685



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                           
Query: 304     aggctggtggccttctctgcatccacaggcgaggctgccgcggaagtgagcctaaagatg 363
               |||||| ||||||||||||||||||| || ||| |||||||| |  |||| |||||||||
Sbjct: 2947418 aggctgttggccttctctgcatccacgggagagcctgccgcgaagttgagtctaaagatg 2947477

                          
Query: 364     cagggcaaaag 374
               || || |||||
Sbjct: 2947478 caagggaaaag 2947488



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                      
Query: 99      ggagatcgtcatcgccggcgccgggctcgccggactcgc 137
               |||||||||||||||||||||||| |||||||| |||||
Sbjct: 2943631 ggagatcgtcatcgccggcgccggcctcgccgggctcgc 2943669



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                         
Query: 304     aggctggtggccttctctgcatccac 329
               ||||||||||||||||||||||||||
Sbjct: 2975801 aggctggtggccttctctgcatccac 2975826



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                     
Query: 177     ggtgctggagtcgtcggcgacgctgcgggcgtcggggt 214
               |||||||||||||||| ||  ||| |||||||||||||
Sbjct: 2940530 ggtgctggagtcgtcgccggagctccgggcgtcggggt 2940567



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                     
Query: 177     ggtgctggagtcgtcggcgacgctgcgggcgtcggggt 214
               |||||||||||||||| ||  ||| |||||||||||||
Sbjct: 2916900 ggtgctggagtcgtcgccggagctccgggcgtcggggt 2916937
to top
>dbj|AK103088.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118I15, full
           insert sequence
          Length = 1518

 Score =  167 bits (84), Expect = 4e-38
 Identities = 156/180 (86%)
 Strand = Plus / Plus

                                                                       
Query: 99  ggagatcgtcatcgccggcgccgggctcgccggactcgccacggccctggggttgcacag 158
           |||||||||||||||||||||||| |||||||| |||||   |||||| ||  |||||||
Sbjct: 100 ggagatcgtcatcgccggcgccggcctcgccgggctcgcagtggccctcggactgcacag 159

                                                                       
Query: 159 gaaaggggttcggagcgtggtgctggagtcgtcggcgacgctgcgggcgtcggggtacgc 218
           ||||||  |  ||||||||||||||||||||||| ||||||||||| |||| ||||  ||
Sbjct: 160 gaaaggactgaggagcgtggtgctggagtcgtcgccgacgctgcggacgtccgggttggc 219

                                                                       
Query: 219 gttcaacacatggaccaacgccttccgcgcgctcgatgccctcggcgtcggggacaagat 278
           ||||| ||||||||| ||||||||||||||||| |||||||| || || || ||||||||
Sbjct: 220 gttcatcacatggacgaacgccttccgcgcgcttgatgcccttggggtaggcgacaagat 279
to top
>dbj|AK106420.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-B02, full
           insert sequence
          Length = 1590

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 82/100 (82%)
 Strand = Plus / Plus

                                                                       
Query: 115 ggcgccgggctcgccggactcgccacggccctggggttgcacaggaaaggggttcggagc 174
           ||||||||| ||||||| ||||||  ||| || ||| ||||||||||||||||   | ||
Sbjct: 277 ggcgccgggatcgccggcctcgccgtggctctcgggctgcacaggaaaggggtgaagtgc 336

                                                   
Query: 175 gtggtgctggagtcgtcggcgacgctgcgggcgtcggggt 214
             ||||||| |||||||| ||  ||| |||||||||||||
Sbjct: 337 tcggtgctgaagtcgtcgccggagctccgggcgtcggggt 376
to top
>gb|AE004755.1| Pseudomonas aeruginosa PAO1, section 316 of 529 of the complete
            genome
          Length = 14759

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                        
Query: 101  agatcgtcatcgccggcgccgggctcgccggactcgccacggcc 144
            ||||||||||||||||||||||  ||| ||| |||||| |||||
Sbjct: 8363 agatcgtcatcgccggcgccggcatcggcgggctcgccgcggcc 8406
to top
>ref|XM_515380.1| PREDICTED: Pan troglodytes LOC459125 (LOC459125), mRNA
          Length = 4679

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 302  agaggctggtggccttctctgc 323
            ||||||||||||||||||||||
Sbjct: 2851 agaggctggtggccttctctgc 2830
to top
>emb|AL731628.4|OSJN00282 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0088C09,
             complete sequence
          Length = 96079

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 115   ggcgccgggctcgccggactcgccacggccctgg 148
             ||||||||| ||||||| ||||||||||| ||||
Sbjct: 36294 ggcgccgggatcgccgggctcgccacggcgctgg 36327
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>ref|NM_001029883.1| Homo sapiens similar to cDNA sequence BC027072 (FLJ34931), mRNA
          Length = 7044

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 302  agaggctggtggccttctctgc 323
            ||||||||||||||||||||||
Sbjct: 2851 agaggctggtggccttctctgc 2830
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 102     gatcgtcatcgccggcgccggg 123
               ||||||||||||||||||||||
Sbjct: 2671427 gatcgtcatcgccggcgccggg 2671406
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                  
Query: 115      ggcgccgggctcgccggactcgccacggccctgg 148
                ||||||||| ||||||| ||||||||||| ||||
Sbjct: 20933071 ggcgccgggatcgccgggctcgccacggcgctgg 20933104
to top
>gb|AC105398.3| Homo sapiens BAC clone RP11-656O12 from 2, complete sequence
          Length = 170262

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 302    agaggctggtggccttctctgc 323
              ||||||||||||||||||||||
Sbjct: 108271 agaggctggtggccttctctgc 108292
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 111     cgccggcgccgggctcgccgga 132
               ||||||||||||||||||||||
Sbjct: 1162663 cgccggcgccgggctcgccgga 1162642
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>emb|BX572600.1| Rhodopseudomonas palustris CGA009 complete genome; segment 8/16
          Length = 349640

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 114    cggcgccgggctcgccggact 134
              |||||||||||||||||||||
Sbjct: 294822 cggcgccgggctcgccggact 294842
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>emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genome; segment 5/16
          Length = 349737

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 110   tcgccggcgccgggctcgccg 130
             |||||||||||||||||||||
Sbjct: 57160 tcgccggcgccgggctcgccg 57180
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>gb|AC105081.4| Homo sapiens chromosome 8, clone CTC-788C1, complete sequence
          Length = 158605

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 304   aggctggtggccttctctgca 324
             |||||||||||||||||||||
Sbjct: 96141 aggctggtggccttctctgca 96161
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 189     gtcggcgacgctgcgggcgtcgggg 213
               |||||||| ||||||||||||||||
Sbjct: 7304928 gtcggcgaagctgcgggcgtcgggg 7304904
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>dbj|AP003351.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1184D12
          Length = 176854

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 304   aggctggtggccttctctgca 324
             |||||||||||||||||||||
Sbjct: 18593 aggctggtggccttctctgca 18573
to top
>ref|XM_476770.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 657

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 98  aggagatcgtcatcgccggcgccg 121
           |||||||||||||||||| |||||
Sbjct: 41  aggagatcgtcatcgccgtcgccg 64
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>gb|AC149084.5| Mus musculus BAC clone RP23-173A12 from chromosome 19, complete
             sequence
          Length = 188848

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 77    tgcggtggatggagggcgtcgaggagat 104
             ||||||||| |||||| |||||||||||
Sbjct: 74081 tgcggtggagggagggagtcgaggagat 74108
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>gb|AC145549.3| Mus musculus BAC clone RP23-21M23 from chromosome 19, complete sequence
          Length = 247655

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 77     tgcggtggatggagggcgtcgaggagat 104
              ||||||||| |||||| |||||||||||
Sbjct: 132864 tgcggtggagggagggagtcgaggagat 132891
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>gb|AC132957.3| Mus musculus BAC clone RP23-149E9 from chromosome 19, complete sequence
          Length = 246177

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 77     tgcggtggatggagggcgtcgaggagat 104
              ||||||||| |||||| |||||||||||
Sbjct: 193068 tgcggtggagggagggagtcgaggagat 193095
to top
>emb|Z92967.1|CEF14D1 Caenorhabditis elegans Cosmid F14D1, complete sequence
          Length = 32703

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 91    ggcgtcgaggagatcgtcatcgcc 114
             |||| |||||||||||||||||||
Sbjct: 11221 ggcgacgaggagatcgtcatcgcc 11198
to top
>emb|CR855994.1| Wallaby DNA sequence from clone MEKBa-69G12, complete sequence
          Length = 174698

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 33    ttcaccactctgctatttctttcc 56
             |||||||||||||| |||||||||
Sbjct: 36172 ttcaccactctgctctttctttcc 36195
to top
>gb|AY286456.1| Mycobacterium gadium strain ATCC 27726 RecA (recA) gene, partial
           cds
          Length = 966

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 402 gcgcaacttcctgctggaga 421
           ||||||||||||||||||||
Sbjct: 918 gcgcaacttcctgctggaga 937
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                          
Query: 233    ccaacgccttccgcgcgctcgatgccctcggcgtcggggacaag 276
              |||||||||||| |||| |||| || || |||||||| ||||||
Sbjct: 808987 ccaacgccttccacgcgttcgacgcgctgggcgtcggcgacaag 809030
to top
>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16
          Length = 349876

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 244    cgcgcgctcgatgccctcggcgtc 267
              |||||||||||||||| |||||||
Sbjct: 296650 cgcgcgctcgatgcccgcggcgtc 296627
to top
>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14
          Length = 348014

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 244    cgcgcgctcgatgccctcggcgtc 267
              |||||||||||||||| |||||||
Sbjct: 208128 cgcgcgctcgatgcccgcggcgtc 208105
to top
>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12
          Length = 349672

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 244    cgcgcgctcgatgccctcggcgtc 267
              |||||||||||||||| |||||||
Sbjct: 190370 cgcgcgctcgatgcccgcggcgtc 190393
to top
>gb|DQ397556.1| Cenarchaeum symbiosum clone C13A10, complete sequence
          Length = 40870

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 328   acaggcgaggctgccgcgga 347
             ||||||||||||||||||||
Sbjct: 14235 acaggcgaggctgccgcgga 14254
to top
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 108     catcgccggcgccgggctcg 127
               ||||||||||||||||||||
Sbjct: 3854543 catcgccggcgccgggctcg 3854524



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 107    tcatcgccggcgccgggctcgccg 130
              ||||||||||||||| ||||||||
Sbjct: 671675 tcatcgccggcgccgcgctcgccg 671652
to top
>gb|AE012435.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 343
            of 460 of the complete genome
          Length = 11282

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 105  cgtcatcgccggcgccgggctcgc 128
            |||||||||| |||||||||||||
Sbjct: 4327 cgtcatcgcctgcgccgggctcgc 4350
to top
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 110     tcgccggcgccgggctcgccggac 133
               |||||||||||||||||| |||||
Sbjct: 1680633 tcgccggcgccgggctcggcggac 1680610
to top
>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001
          Length = 2005935

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 104    tcgtcatcgccggcgccggg 123
              ||||||||||||||||||||
Sbjct: 774062 tcgtcatcgccggcgccggg 774043
to top
>dbj|AB207867.1| Escherichia coli transposon Tn2610, complete sequence
          Length = 23883

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 301  gagaggctggtggccttctc 320
            ||||||||||||||||||||
Sbjct: 8926 gagaggctggtggccttctc 8907
to top
>gb|AF261825.2| Salmonella enterica subsp. enterica serovar Typhimurium genomic island
             I, complete sequence
          Length = 47723

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 301   gagaggctggtggccttctc 320
             ||||||||||||||||||||
Sbjct: 35977 gagaggctggtggccttctc 35958
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 249     gctcgatgccctcggcgtcg 268
               ||||||||||||||||||||
Sbjct: 3350422 gctcgatgccctcggcgtcg 3350441
to top
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 248     cgctcgatgccctcggcgtc 267
               ||||||||||||||||||||
Sbjct: 3057535 cgctcgatgccctcggcgtc 3057554
to top
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 105     cgtcatcgccggcgccgggctcgc 128
               |||||||||| |||||||||||||
Sbjct: 1177986 cgtcatcgcctgcgccgggctcgc 1177963
to top
>gb|AF386507.1|AF386507 Streptomyces lavendulae complestatin biosynthetic gene cluster,
             complete sequence
          Length = 55972

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 110   tcgccggcgccgggctcgcc 129
             ||||||||||||||||||||
Sbjct: 14370 tcgccggcgccgggctcgcc 14389
to top
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 95      tcgaggagatcgtcatcgccggcg 118
               |||| |||||||||||||||||||
Sbjct: 4999118 tcgacgagatcgtcatcgccggcg 4999095



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 108     catcgccggcgccgggctcg 127
               ||||||||||||||||||||
Sbjct: 2628540 catcgccggcgccgggctcg 2628559
to top
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 114     cggcgccgggctcgccggactcgc 137
               ||||||||||||||||| ||||||
Sbjct: 1071283 cggcgccgggctcgccgaactcgc 1071260
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 98      aggagatcgtcatcgccggcgccg 121
               |||||||||||||||||| |||||
Sbjct: 3826276 aggagatcgtcatcgccgtcgccg 3826253
to top
>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome
          Length = 2088737

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 93     cgtcgaggagatcgtcatcg 112
              ||||||||||||||||||||
Sbjct: 992638 cgtcgaggagatcgtcatcg 992619
to top
>gb|AC073218.6| Homo sapiens BAC clone RP11-529E15 from 2, complete sequence
          Length = 150263

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 161   aaggggttcggagcgtggtgctgg 184
             |||||||| |||||||||||||||
Sbjct: 94399 aaggggtttggagcgtggtgctgg 94376
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 114     cggcgccgggctcgccggactcgc 137
               |||||||| |||||||||||||||
Sbjct: 8959676 cggcgccgtgctcgccggactcgc 8959653



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 105     cgtcatcgccggcgccgggctcgc 128
               |||| |||||||||||||||||||
Sbjct: 4438572 cgtcctcgccggcgccgggctcgc 4438549
to top
>gb|AF240624.1|AF240624 Homo sapiens clone 11qtel_2072draft_c sequence
          Length = 12583

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 303  gaggctggtggccttctctg 322
            ||||||||||||||||||||
Sbjct: 5502 gaggctggtggccttctctg 5521
to top
>dbj|AP004670.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0496D04
          Length = 197358

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 98    aggagatcgtcatcgccggcgccg 121
             |||||||||||||||||| |||||
Sbjct: 65388 aggagatcgtcatcgccgtcgccg 65365
to top
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 111    cgccggcgccgggctcgccg 130
              ||||||||||||||||||||
Sbjct: 535267 cgccggcgccgggctcgccg 535286
to top
>dbj|AB103506.1| Serratia marcescens tnpR, blaTEM, rmtB, orfA genes for resolvase,
            beta-lactamase TEM-1, 16S rRNA methylase, hypothetical
            protein, partial and complete cds
          Length = 4566

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 301  gagaggctggtggccttctc 320
            ||||||||||||||||||||
Sbjct: 3710 gagaggctggtggccttctc 3729
to top
>ref|XM_308622.2| Anopheles gambiae str. PEST ENSANGP00000007551
           (ENSANGG00000005701), partial mRNA
          Length = 2007

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 416 tggagacgctggagaacgagctgc 439
           |||||| |||||||||||||||||
Sbjct: 188 tggagaagctggagaacgagctgc 211
to top
>emb|CT025832.1| Acinetobacter baumannii str. AYE. Genomics of Multi-Drug Resistance in
             Acinetobacter baumannii
          Length = 100001

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 301   gagaggctggtggccttctc 320
             ||||||||||||||||||||
Sbjct: 38555 gagaggctggtggccttctc 38536



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 301   gagaggctggtggccttctc 320
             ||||||||||||||||||||
Sbjct: 33442 gagaggctggtggccttctc 33423
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>gb|AF071555.1|AF071555 Salmonella typhimurium DT104 antibiotic resistance gene cluster,
            complete sequence
          Length = 13077

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 301  gagaggctggtggccttctc 320
            ||||||||||||||||||||
Sbjct: 9939 gagaggctggtggccttctc 9920
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>emb|X14716.1|ACNIFA2 Azorhizobium caulinodans nifA gene for nitrogen fixation regulatory
            protein
          Length = 2641

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 111  cgccggcgccgggctcgccg 130
            ||||||||||||||||||||
Sbjct: 1887 cgccggcgccgggctcgccg 1868
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>emb|X08014.1|ACNIFA Azorhizobium caulinodans nifA gene
          Length = 2809

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 111  cgccggcgccgggctcgccg 130
            ||||||||||||||||||||
Sbjct: 2294 cgccggcgccgggctcgccg 2275
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 413     tgctggagacgctggagaac 432
               ||||||||||||||||||||
Sbjct: 6104728 tgctggagacgctggagaac 6104709
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>dbj|AP003039.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-116B3, complete
              sequence
          Length = 152252

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 303    gaggctggtggccttctctg 322
              ||||||||||||||||||||
Sbjct: 110442 gaggctggtggccttctctg 110461
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 248     cgctcgatgccctcggcgtc 267
               ||||||||||||||||||||
Sbjct: 4794443 cgctcgatgccctcggcgtc 4794462
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>gb|AC170878.4| Mus musculus BAC clone RP24-226F17 from chromosome 19, complete
             sequence
          Length = 148454

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 77    tgcggtggatggagggcgtcgaggagat 104
             ||||||||| |||||| |||||||||||
Sbjct: 11854 tgcggtggagggagggagtcgaggagat 11881
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>emb|AL663091.13| Mouse DNA sequence from clone RP23-392P11 on chromosome 2, complete
             sequence
          Length = 196078

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 279   cagggagcaccacctgctct 298
             ||||||||||||||||||||
Sbjct: 64851 cagggagcaccacctgctct 64832


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,020,677
Number of Sequences: 3902068
Number of extensions: 3020677
Number of successful extensions: 63245
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60604
Number of HSP's gapped (non-prelim): 2640
length of query: 477
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 455
effective length of database: 17,147,199,772
effective search space: 7801975896260
effective search space used: 7801975896260
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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