Clone Name | bart58e03 |
---|---|
Clone Library Name | barley_pub |
>ZRP4_MAIZE (P47917) O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT)| Length = 364 Score = 58.5 bits (140), Expect = 7e-09 Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 9/103 (8%) Frame = +2 Query: 74 TDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRLGGTASLPDLMAALSLPPPKA 253 TD L+ AQ +L + ++ SMAL+ AI L I AI GG ASL +++ + L P + Sbjct: 9 TDQSLLDAQLELWHTTFAFMKSMALKSAIHLRIADAIHLHGGAASLSQILSKVHLHPSRV 68 Query: 254 PFLSRVLRLLAKSDALACTEAG---------IYSLTPLSYILV 355 L R++R+L ++ G +Y+LTP+S +L+ Sbjct: 69 SSLRRLMRVLTTTNVFGTQPLGGGSDDDSEPVYTLTPVSRLLI 111
>CVMT1_OCIBA (Q93WU3) Chavicol O-methyltransferase (EC 2.1.1.146) ((Iso)eugenol| O-methyltransferase CVOMT1) (S-adenosysl-L-methionine:(Iso)eugenol O-methyltransferase CVOMT1) Length = 356 Score = 58.5 bits (140), Expect = 7e-09 Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 5/136 (3%) Frame = +2 Query: 41 MAAQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRLGGTASLPDL 220 MA Q+ +++ T+ QL++AQA + H + SM+L+CAI+LGIP + + +L L Sbjct: 1 MALQNMDISLSTE-QLLQAQAHVWNHMYAFANSMSLKCAIQLGIPDILHKHDHPMTLSQL 59 Query: 221 MAALSLPPPKAPFLSRVLRLLAKSDAL----ACTEAGIYSLTPLSYILVDGV-LIDGEAR 385 + A+ + K+ R++R L S+ + + Y LTP S +L+ G L Sbjct: 60 LKAIPINKEKSQSFQRLMRALVNSNFFIEENSNNQEVCYWLTPASRLLLKGAPLTVAPLV 119 Query: 386 QVAFPLAVTSRYHMES 433 QV T+ +H S Sbjct: 120 QVVLDPTFTNPWHYMS 135
>7OMT8_MEDSA (O24529) Isoflavone-7-O-methytransferase 8 (EC 2.1.1.150)| (Isoflavone-O-methytransferase 8) (7-IOMT-8) Length = 352 Score = 56.6 bits (135), Expect = 3e-08 Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 2/96 (2%) Frame = +2 Query: 80 AQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRLGGTASLPDLMAALSLPPPKAPF 259 +++ KAQA L +H ++ SM+L+ A+E+ IP IQ G SL +L++ L +P K Sbjct: 11 SEIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGN 70 Query: 260 LSRVLRLLAKSD--ALACTEAGIYSLTPLSYILVDG 361 + R++R LA + + E Y+LT S +LV G Sbjct: 71 VRRLMRYLAHNGFFEIITKEEESYALTVASELLVRG 106
>7OMT6_MEDSA (O22308) Isoflavone-7-O-methytransferase 6 (EC 2.1.1.150)| (Isoflavone-O-methytransferase 6) (7-IOMT-6) Length = 352 Score = 56.6 bits (135), Expect = 3e-08 Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 2/96 (2%) Frame = +2 Query: 80 AQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRLGGTASLPDLMAALSLPPPKAPF 259 +++ KAQA L +H ++ SM+L+ A+E+ IP IQ G SL +L++ L +P K Sbjct: 11 SEIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGN 70 Query: 260 LSRVLRLLAKSD--ALACTEAGIYSLTPLSYILVDG 361 + R++R LA + + E Y+LT S +LV G Sbjct: 71 VRRLMRYLAHNGFFEIITKEEESYALTVASELLVRG 106
>EOMT1_OCIBA (Q93WU2) Eugenol O-methyltransferase (EC 2.1.1.146) ((Iso)eugenol| O-methyltransferase EOMT1) (S-adenosysl-L-methionine:(Iso)eugenol O-methyltransferase EOMT1) Length = 357 Score = 53.9 bits (128), Expect = 2e-07 Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 5/110 (4%) Frame = +2 Query: 41 MAAQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRLGGTASLPDL 220 MA Q +++ T+ QL++AQ + H + SM+L+CAI+LGIP + + G +L L Sbjct: 1 MALQKVDISLSTE-QLLQAQVHVWNHMYAFANSMSLKCAIQLGIPDILHKHGRPMTLSQL 59 Query: 221 MAALSLPPPKAPFLSRVLRLLAKSDAL-----ACTEAGIYSLTPLSYILV 355 + ++ + K R++R L S+ + + Y LTP S +L+ Sbjct: 60 LQSIPINKEKTQCFQRLMRALVNSNFFIEENNSNNQEVCYWLTPASCLLL 109
>4OMT_COPJA (Q9LEL5) 3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase| (EC 2.1.1.116) (S-adenosyl-L-methionine:3'-hydroxy-N-methylcoclaurine 4'-O-methyltransferase) (4'-OMT) Length = 350 Score = 44.3 bits (103), Expect = 1e-04 Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 4/92 (4%) Frame = +2 Query: 89 IKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRLGGTASLPDLMAALSLPPPKAPFLSR 268 IKAQA + + + S+ LRCA+ELGI I +L DL + L + L R Sbjct: 12 IKAQAHVWKIIYGFADSLVLRCAVELGIVDIIDNNNQPMALADLASKLPVSDVNCDNLYR 71 Query: 269 VLRLLAKSDALACTEAG----IYSLTPLSYIL 352 +LR L K + L ++ Y+L P++ +L Sbjct: 72 ILRYLVKMEILRVEKSDDGQKKYALEPIATLL 103
>COMT1_EUCGU (P46484) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68)| (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) Length = 366 Score = 40.4 bits (93), Expect = 0.002 Identities = 38/120 (31%), Positives = 51/120 (42%), Gaps = 14/120 (11%) Frame = +2 Query: 53 SQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRLGGTASLPDLMAAL 232 S+T PT +A + + + M L+ AIEL + + + G A L A Sbjct: 6 SETQMTPTQVSDEEANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGAFLSPGEVAA 65 Query: 233 SLPP--PKAP-FLSRVLRLLAKSDALACTEAG--------IYSLTPLSYILV---DGVLI 370 LP P+AP L R+ RLLA L CT +Y L P+ LV DGV I Sbjct: 66 QLPTQNPEAPVMLDRIFRLLASYSVLTCTLRNLPDGKVERLYGLAPVCKFLVKNEDGVSI 125
>OMT1_ARATH (Q9FK25) Quercetin 3-O-methyltransferase 1 (EC 2.1.1.76) (AtOMT1)| (Flavonol 3-O-methyltransferase 1) Length = 363 Score = 39.7 bits (91), Expect = 0.004 Identities = 36/145 (24%), Positives = 60/145 (41%), Gaps = 12/145 (8%) Frame = +2 Query: 41 MAAQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRLGGTASLPDL 220 M + ++T P +A + + + MAL+ A+EL + + + G S ++ Sbjct: 1 MGSTAETQLTPVQVTDDEAALFAMQLASASVLPMALKSALELDLLEIMAKNGSPMSPTEI 60 Query: 221 MAALSLPPPKAP-FLSRVLRLLAKSDALACTE--------AGIYSLTPLSYILV---DGV 364 + L P+AP L R+LRLL L C+ IY L P+ L DGV Sbjct: 61 ASKLPTKNPEAPVMLDRILRLLTSYSVLTCSNRKLSGDGVERIYGLGPVCKYLTKNEDGV 120 Query: 365 LIDGEARQVAFPLAVTSRYHMESGL 439 I + + S YH++ + Sbjct: 121 SIAALCLMNQDKVLMESWYHLKDAI 145
>COMT1_CATRO (Q8W013) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68)| (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) Length = 363 Score = 39.7 bits (91), Expect = 0.004 Identities = 39/114 (34%), Positives = 53/114 (46%), Gaps = 14/114 (12%) Frame = +2 Query: 140 MALRCAIELGIPTAIQRLGGTA--SLPDLMAALSLPPPKAP-FLSRVLRLLAKSDALACT 310 M L+ AIEL + I++ G A S +L A L P AP L R+LRLLA L CT Sbjct: 34 MVLKSAIELDLLELIKKSGPGAYVSPSELAAQLPTQNPDAPVMLDRILRLLASYSVLNCT 93 Query: 311 -----EAGI---YSLTPLSYILV---DGVLIDGEARQVAFPLAVTSRYHMESGL 439 + GI YSL P+ L DGV + + + S YH++ + Sbjct: 94 LKDLPDGGIERLYSLAPVCKFLTKNEDGVSMAALLLMNQDKVLMESWYHLKDAV 147
>COOMT_COPJA (Q8H9A8) Columbamine O-methyltransferase (EC 2.1.1.118) (CoOMT)| Length = 351 Score = 39.7 bits (91), Expect = 0.004 Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 5/96 (5%) Frame = +2 Query: 89 IKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRLGGTASLPDLMAALSLPPPKAPFLSR 268 IKAQA + +H + ++ LR + LGIP I G +L L+ L L Sbjct: 13 IKAQAQVWKHMFGFAETIMLRSTVSLGIPDIIHN-NGPVTLSQLVTHLPLKSTSIDRFHH 71 Query: 269 VLRLLAKSDALA-----CTEAGIYSLTPLSYILVDG 361 +R L T+ Y LTP S +LV G Sbjct: 72 FMRYLVHMQLFTISTDQITKEDKYELTPASKLLVHG 107
>COMT2_POPTM (Q41086) Caffeic acid 3-O-methyltransferase 2 (EC 2.1.1.68)| (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase 2) (COMT-2) (CAOMT-2) Length = 364 Score = 37.4 bits (85), Expect = 0.018 Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 5/95 (5%) Frame = +2 Query: 41 MAAQSQTMTVPTDAQLIKAQAD--LQRHSLTYLTSMALRCAIELGIPTAIQRLGGTASLP 214 M + +T P AQ++ +A+ LQ S + L M L+ AIEL + + + G A LP Sbjct: 1 MGSTGETQMSP--AQILDEEANFALQLISSSVLP-MVLKTAIELDLLEIMAKAGPGALLP 57 Query: 215 --DLMAALSLPPPKAP-FLSRVLRLLAKSDALACT 310 D+ + L P AP L R+LRLLA L C+ Sbjct: 58 PSDIASHLPTKNPNAPVMLDRILRLLASYSILICS 92
>COMT1_CAPAN (Q9FQY8) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68)| (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) Length = 359 Score = 37.0 bits (84), Expect = 0.023 Identities = 39/124 (31%), Positives = 58/124 (46%), Gaps = 14/124 (11%) Frame = +2 Query: 41 MAAQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRLGGTASLPDL 220 M + +Q +T D + A +Q S + L M L+ A+EL + + + G A++ Sbjct: 1 MDSTNQNLTQTEDEAFLFA---MQLASASVLP-MVLKSALELDLLEIMAKAGPGAAISPS 56 Query: 221 MAALSLPP--PKAP-FLSRVLRLLAKSDALACT--------EAGIYSLTPLSYIL---VD 358 A LP P+AP L R+LRLLA L CT +YSL P+ +L D Sbjct: 57 ELAAQLPTKNPEAPVMLDRMLRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKLLTKNAD 116 Query: 359 GVLI 370 GV + Sbjct: 117 GVSV 120
>COMT1_ROSCH (Q8GU25) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68)| (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) Length = 365 Score = 36.6 bits (83), Expect = 0.030 Identities = 40/147 (27%), Positives = 60/147 (40%), Gaps = 14/147 (9%) Frame = +2 Query: 41 MAAQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRLGGTASLP-- 214 M + +T PT +A + + + M L+ AIEL + + + G A L Sbjct: 1 MGSTGETQMTPTQVSDEEANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGAFLSPN 60 Query: 215 DLMAALSLPPPKAP-FLSRVLRLLAKSDALACT--------EAGIYSLTPLSYILV---D 358 DL + L P+AP L R+LRLLA L + +Y L P+ L D Sbjct: 61 DLASQLPTKNPEAPVMLDRMLRLLASYSILTYSLRTLPDGKVERLYGLGPVCKFLTKNED 120 Query: 359 GVLIDGEARQVAFPLAVTSRYHMESGL 439 GV I + V S YH++ + Sbjct: 121 GVSIAALCLMNQDKVLVESWYHLKDAV 147
>COMT1_POPTM (Q00763) Caffeic acid 3-O-methyltransferase 1 (EC 2.1.1.68)| (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase 1) (COMT-1) (CAOMT-1) Length = 365 Score = 36.2 bits (82), Expect = 0.039 Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 14/124 (11%) Frame = +2 Query: 41 MAAQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRLGGTASLPDL 220 M + +T PT +A + + + M L+ AIEL + + + G A L Sbjct: 1 MGSTGETQMTPTQVSDEEAHLFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTS 60 Query: 221 MAALSLPP--PKAP-FLSRVLRLLAKSDALACT--------EAGIYSLTPLSYILV---D 358 A LP P AP L R+LRLLA L C+ +Y L P+ L D Sbjct: 61 EIASHLPTKNPDAPVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNED 120 Query: 359 GVLI 370 GV + Sbjct: 121 GVSV 124
>COMT1_POPKI (Q43046) Caffeic acid 3-O-methyltransferase 1 (EC 2.1.1.68)| (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase 1) (COMT-1) (CAOMT-1) Length = 365 Score = 36.2 bits (82), Expect = 0.039 Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 14/124 (11%) Frame = +2 Query: 41 MAAQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRLGGTASLPDL 220 M + +T PT +A + + + M L+ AIEL + + + G A L Sbjct: 1 MGSTGETQMTPTQVSDEEAHLFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTS 60 Query: 221 MAALSLPP--PKAP-FLSRVLRLLAKSDALACT--------EAGIYSLTPLSYILV---D 358 A LP P AP L R+LRLLA L C+ +Y L P+ L D Sbjct: 61 EIASHLPTKNPDAPVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNED 120 Query: 359 GVLI 370 GV + Sbjct: 121 GVSV 124
>SMT_COPJA (Q39522) (S)-scoulerine 9-O-methyltransferase (EC 2.1.1.117)| Length = 381 Score = 35.4 bits (80), Expect = 0.067 Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 6/78 (7%) Frame = +2 Query: 140 MALRCAIELGIPTAIQRLGGTASL--PDLMAALSLPPPKAPF-LSRVLRLLAKSDAL--A 304 MALR AIEL + I + G A L D++A + P A L R+LR+L S L + Sbjct: 53 MALRAAIELNVFEIISQAGPDAQLSPSDIVAKIPTKNPSAAISLDRILRMLGASSILSVS 112 Query: 305 CTEAG-IYSLTPLSYILV 355 T++G +Y L S LV Sbjct: 113 TTKSGRVYGLNEESRCLV 130
>SEM6B_MOUSE (O54951) Semaphorin-6B precursor (Semaphorin VIB) (Sema VIB)| (Semaphorin N) (Sema N) Length = 886 Score = 35.0 bits (79), Expect = 0.088 Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 5/55 (9%) Frame = +1 Query: 160 RARHPDGDP-----APRRHRVVAGPDGRAVASATQGAVSQPRPAAAGQIRRPGVH 309 RA HP P +P R RVV+ P G S G P A +RRPG H Sbjct: 782 RASHPGDFPLTPHASPDRRRVVSAPTGPLDPSVGDGLPGPWSPPATSSLRRPGPH 836
>COMT1_COFCA (Q8LL87) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68)| (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) Length = 350 Score = 34.7 bits (78), Expect = 0.11 Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 14/114 (12%) Frame = +2 Query: 140 MALRCAIELGIPTAIQRLGGTA--SLPDLMAALSLPPPKAPF-LSRVLRLLAKSDALAC- 307 M L+ AIEL + I + G A S +L A L P+AP L R+LRLLA L C Sbjct: 21 MVLKSAIELDLLELIAKAGPGAYVSPSELAAQLPTHNPEAPIMLDRILRLLATYSVLDCK 80 Query: 308 ----TEAGI---YSLTPLSYIL---VDGVLIDGEARQVAFPLAVTSRYHMESGL 439 + G+ Y L P+ L DGV + + + S YH++ + Sbjct: 81 LNNLADGGVERLYGLAPVCKFLTKNADGVSMAPLLLMNQDKVLMESWYHLKDAV 134
>CO9A1_MOUSE (Q05722) Collagen alpha-1(IX) chain precursor| Length = 921 Score = 34.3 bits (77), Expect = 0.15 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Frame = +1 Query: 178 GDPAPRRHRVVAGPDGRAVASATQGAVSQPRP-AAAGQIRRPGVHRGRDLQPDPAVLHPR 354 G+P P+ + +G +G A A G + QP P + G PG+ ++ P V PR Sbjct: 670 GEPGPKGEQGASGEEGEAGARGDLGDMGQPGPKGSVGNPGEPGLRGPEGIRGLPGVEGPR 729 Query: 355 G 357 G Sbjct: 730 G 730
>COMT1_EUCGL (Q9SWC2) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68)| (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) (Fragment) Length = 313 Score = 34.3 bits (77), Expect = 0.15 Identities = 33/87 (37%), Positives = 37/87 (42%), Gaps = 14/87 (16%) Frame = +2 Query: 146 LRCAIELGIPTAIQRLGGTASLPDLMAALSLPP--PKAP-FLSRVLRLLAKSDALACTEA 316 L AIEL + + R G A L A LP P AP L R+ RLLA L CT Sbjct: 18 LTAAIELDLLEIMARAGPGAYLTPGEVASQLPTQNPDAPVMLDRIFRLLASYSVLTCTLC 77 Query: 317 G--------IYSLTPLSYILV---DGV 364 +Y L PL LV DGV Sbjct: 78 DLPEGKVERLYGLAPLCKFLVKNEDGV 104
>COMT1_CAPCH (O81646) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68)| (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) Length = 359 Score = 33.9 bits (76), Expect = 0.20 Identities = 39/124 (31%), Positives = 56/124 (45%), Gaps = 14/124 (11%) Frame = +2 Query: 41 MAAQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRLGGTA--SLP 214 M + +Q++T D + A +Q S + L M L+ +EL + + + G A S Sbjct: 1 MGSINQSLTQTEDEAFVFA---MQLASASVLP-MVLKATVELDLLEIMAKSGPGAFISPS 56 Query: 215 DLMAALSLPPPKAP-FLSRVLRLLAKSDALACT--------EAGIYSLTPLSYILV---D 358 +L A L P+AP L R+ RLLA L CT +YSL P+ L D Sbjct: 57 ELAAQLPTKNPEAPVMLDRMFRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKFLTKNGD 116 Query: 359 GVLI 370 GV I Sbjct: 117 GVSI 120
>COMT3_POPKI (Q43047) Caffeic acid 3-O-methyltransferase 3 (EC 2.1.1.68)| (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase 1) (COMT-3) (CAOMT-3) Length = 364 Score = 33.9 bits (76), Expect = 0.20 Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 4/94 (4%) Frame = +2 Query: 41 MAAQSQTMTVPTDAQLIKAQADLQRHSLTY-LTSMALRCAIELGIPTAIQRLGGTASLP- 214 M + +T P AQ++ +A+ ++ + M L+ AIEL + + + G A L Sbjct: 1 MGSTGETQMSP--AQILDEEANFAMQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLSP 58 Query: 215 -DLMAALSLPPPKAP-FLSRVLRLLAKSDALACT 310 D+ + L P AP L R+LRLLA L C+ Sbjct: 59 SDIASHLPTKNPDAPVMLDRILRLLASYSILICS 92
>COMT1_MAIZE (Q06509) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68)| (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) Length = 364 Score = 33.9 bits (76), Expect = 0.20 Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 8/64 (12%) Frame = +2 Query: 140 MALRCAIELGIPTAIQRL--GGTASLPD------LMAALSLPPPKAPFLSRVLRLLAKSD 295 M L+ AIELG+ +Q+ GG A+L + AA S P A + R+LRLLA D Sbjct: 31 MTLKNAIELGLLEVLQKEAGGGKAALAPEEVVARMPAAPSDPAAAAAMVDRMLRLLASYD 90 Query: 296 ALAC 307 + C Sbjct: 91 VVRC 94
>K1C19_CHICK (O93256) Keratin, type I cytoskeletal 19 (Cytokeratin-19) (CK-19)| (Keratin-19) (K19) (GK-19) Length = 423 Score = 33.1 bits (74), Expect = 0.33 Identities = 24/68 (35%), Positives = 34/68 (50%) Frame = +2 Query: 47 AQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRLGGTASLPDLMA 226 AQ Q M +AQL + +AD++R + Y M ++ +E I T Q L G S L Sbjct: 350 AQIQDMIGSIEAQLAELRADMERQNSEYKMLMDIKTRLEQEIATYRQLLEGQES--QLFG 407 Query: 227 ALSLPPPK 250 +LS P K Sbjct: 408 SLSGSPDK 415
>SEM6B_RAT (O70141) Semaphorin-6B precursor (Semaphorin Z) (Sema Z)| Length = 887 Score = 33.1 bits (74), Expect = 0.33 Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 6/56 (10%) Frame = +1 Query: 160 RARHPDGDP-----APRRHRVVAGPDGRAVASATQGAVSQP-RPAAAGQIRRPGVH 309 RA HP P +P R RVV+ P G +S+ + P P A +RRPG H Sbjct: 782 RASHPGDFPLTPHASPDRRRVVSAPTGPLDSSSVGDDLPGPWSPPATSSLRRPGPH 837
>COBA2_MOUSE (Q64739) Collagen alpha-2(XI) chain precursor| Length = 1736 Score = 32.7 bits (73), Expect = 0.44 Identities = 22/64 (34%), Positives = 27/64 (42%) Frame = +1 Query: 172 PDGDPAPRRHRVVAGPDGRAVASATQGAVSQPRPAAAGQIRRPGVHRGRDLQPDPAVLHP 351 P G P P R AGP+G + G V P G+ PG +Q +P V P Sbjct: 1175 PMGPPGPPGPRGPAGPNGADGPQGSPGGVGNLGP--PGEKGEPGESGSPGVQGEPGVKGP 1232 Query: 352 RGWR 363 RG R Sbjct: 1233 RGER 1236
>CO9A1_RAT (P20850) Collagen alpha-1(IX) chain (Fragment)| Length = 325 Score = 32.7 bits (73), Expect = 0.44 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Frame = +1 Query: 178 GDPAPRRHRVVAGPDGRAVASATQGAVSQPRP-AAAGQIRRPGVHRGRDLQPDPAVLHPR 354 G+P P+ + +G +G A G + QP P + G PG+ ++ P V PR Sbjct: 74 GEPGPKGEQGASGEEGEAGVRGDLGDMGQPGPKGSVGNPGEPGLRGPEGIRGLPGVEGPR 133 Query: 355 G 357 G Sbjct: 134 G 134
>COBA2_HUMAN (P13942) Collagen alpha-2(XI) chain precursor| Length = 1736 Score = 32.3 bits (72), Expect = 0.57 Identities = 22/64 (34%), Positives = 26/64 (40%) Frame = +1 Query: 172 PDGDPAPRRHRVVAGPDGRAVASATQGAVSQPRPAAAGQIRRPGVHRGRDLQPDPAVLHP 351 P G P P R AGP+G G V P G+ PG +Q +P V P Sbjct: 1175 PMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGP--PGEKGEPGESGSPGIQGEPGVKGP 1232 Query: 352 RGWR 363 RG R Sbjct: 1233 RGER 1236
>LRP1_HHV1F (P17588) Latency-related protein 1| Length = 340 Score = 31.6 bits (70), Expect = 0.97 Identities = 20/51 (39%), Positives = 24/51 (47%) Frame = +1 Query: 163 ARHPDGDPAPRRHRVVAGPDGRAVASATQGAVSQPRPAAAGQIRRPGVHRG 315 AR P P P R R AG +G + S +QG R +G R PG RG Sbjct: 253 ARLPGTLPRPPRPRSSAGAEGGFLLSPSQGTDGPARGGGSGGGRGPGGGRG 303
>COMT1_CLABR (O23760) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68)| (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) Length = 370 Score = 31.6 bits (70), Expect = 0.97 Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 6/92 (6%) Frame = +2 Query: 53 SQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRL-----GGTASLPD 217 ++T PT +A + + + M L+ AIEL + + + G S + Sbjct: 7 AETQLTPTHVSDEEANLFAMQLASASVLPMVLKAAIELDVLEIMAKSIPHGSGAYISPAE 66 Query: 218 LMAALSLPPPKAP-FLSRVLRLLAKSDALACT 310 + A L P AP L RVLRLLA + C+ Sbjct: 67 IAAQLPTTNPDAPVMLDRVLRLLASYSVVTCS 98
>AFSK_STRCO (P54741) Serine/threonine protein kinase afsK (EC 2.7.11.1)| Length = 799 Score = 31.2 bits (69), Expect = 1.3 Identities = 28/86 (32%), Positives = 31/86 (36%), Gaps = 8/86 (9%) Frame = +1 Query: 130 PHVHGTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASATQGAVSQPRP----AAAGQIRR 297 P H V PDG P V G VA AV+ P P AA+ R Sbjct: 342 PPAHVPAVPAPVGAPDGGPVRLPGAAVPIGPGPRVADMRAAAVAAPPPESALAASWSRPR 401 Query: 298 PGVHRGRDLQPDPA----VLHPRGWR 363 PGV+ P PA P GWR Sbjct: 402 PGVNGADPAVPAPAPAPPEASPAGWR 427
>SCND2_HUMAN (Q9GZW5) SCAN domain-containing protein 2| Length = 306 Score = 31.2 bits (69), Expect = 1.3 Identities = 20/58 (34%), Positives = 24/58 (41%) Frame = -3 Query: 323 RSRPRCTPGRRIWPAAAGRG*ETAPWVAEATARPSGPATTRCRRGAGSPSGCRARWRT 150 R PR P R PA +PW A +GPA+ GS + C RWRT Sbjct: 131 RLEPRARPSGRTPPAQL-----RSPWPMTA----AGPASRARASETGSTASCAGRWRT 179
>COMT1_PRUDU (Q43609) Caffeic acid 3-O-methyltransferase (EC 2.1.1.68)| (S-adenosysl-L-methionine:caffeic acid 3-O-methyltransferase) (COMT) (CAOMT) Length = 365 Score = 31.2 bits (69), Expect = 1.3 Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 3/104 (2%) Frame = +2 Query: 41 MAAQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRLGGTASL--P 214 M + +T PT +A + + + M L+ AIEL + + + G L Sbjct: 1 MGSTGETQMTPTQVSDEEANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGVFLSPT 60 Query: 215 DLMAALSLPPPKAP-FLSRVLRLLAKSDALACTEAGIYSLTPLS 343 D+ + L P AP L R+LRLLA L YSL L+ Sbjct: 61 DIASQLPTKNPDAPVMLDRMLRLLASYSILT------YSLRTLA 98
>S6PD_MALDO (P28475) NADP-dependent D-sorbitol-6-phosphate dehydrogenase (EC| 1.1.1.200) (Aldose-6-phosphate reductase [NADPH]) (NADP-S6PDH) Length = 310 Score = 30.8 bits (68), Expect = 1.7 Identities = 24/80 (30%), Positives = 34/80 (42%) Frame = +2 Query: 95 AQADLQRHSLTYLTSMALRCAIELGIPTAIQRLGGTASLPDLMAALSLPPPKAPFLSRVL 274 A + + H S+ C +PTA LGG A+ D+ ++S P P L+ V Sbjct: 180 AVSQFETHPYFQRDSLVKFCMKHGVLPTAHTPLGGAAANKDMFGSVS--PLDDPVLNDVA 237 Query: 275 RLLAKSDALACTEAGIYSLT 334 + KS A C GI T Sbjct: 238 KKYGKSVAQICLRWGIQRKT 257
>CEND3_HUMAN (Q8WWN8) Centaurin-delta 3 (Cnt-d3) (Arf-GAP, Rho-GAP, ankyrin| repeat and pleckstrin homology domain-containing protein 3) Length = 1544 Score = 30.8 bits (68), Expect = 1.7 Identities = 18/61 (29%), Positives = 23/61 (37%) Frame = +1 Query: 163 ARHPDGDPAPRRHRVVAGPDGRAVASATQGAVSQPRPAAAGQIRRPGVHRGRDLQPDPAV 342 A P PAP+ P R V G + RP + + PGV R + P P Sbjct: 78 AMEPSPSPAPQAQPPKPVPKPRTVFGGLSGPATTQRPGLSPALGGPGVSRSPEPSPRPPP 137 Query: 343 L 345 L Sbjct: 138 L 138
>MUC1_HUMAN (P15941) Mucin-1 precursor (MUC-1) (Polymorphic epithelial mucin)| (PEM) (PEMT) (Episialin) (Tumor-associated mucin) (Carcinoma-associated mucin) (Tumor-associated epithelial membrane antigen) (EMA) (H23AG) (Peanut-reactive urinary mucin) (PUM) Length = 1255 Score = 30.8 bits (68), Expect = 1.7 Identities = 27/82 (32%), Positives = 30/82 (36%), Gaps = 8/82 (9%) Frame = +1 Query: 130 PHVHGTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASAT----QGAVSQP--RPAAAGQI 291 P HG R G AP H V + PD R +T G S P RP A G Sbjct: 853 PPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP-APGST 911 Query: 292 RRP--GVHRGRDLQPDPAVLHP 351 P GV D +P P P Sbjct: 912 APPAHGVTSAPDTRPAPGSTAP 933 Score = 30.8 bits (68), Expect = 1.7 Identities = 27/82 (32%), Positives = 30/82 (36%), Gaps = 8/82 (9%) Frame = +1 Query: 130 PHVHGTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASAT----QGAVSQP--RPAAAGQI 291 P HG R G AP H V + PD R +T G S P RP A G Sbjct: 833 PPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP-APGST 891 Query: 292 RRP--GVHRGRDLQPDPAVLHP 351 P GV D +P P P Sbjct: 892 APPAHGVTSAPDTRPAPGSTAP 913 Score = 30.8 bits (68), Expect = 1.7 Identities = 27/82 (32%), Positives = 30/82 (36%), Gaps = 8/82 (9%) Frame = +1 Query: 130 PHVHGTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASAT----QGAVSQP--RPAAAGQI 291 P HG R G AP H V + PD R +T G S P RP A G Sbjct: 813 PPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP-APGST 871 Query: 292 RRP--GVHRGRDLQPDPAVLHP 351 P GV D +P P P Sbjct: 872 APPAHGVTSAPDTRPAPGSTAP 893 Score = 30.8 bits (68), Expect = 1.7 Identities = 27/82 (32%), Positives = 30/82 (36%), Gaps = 8/82 (9%) Frame = +1 Query: 130 PHVHGTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASAT----QGAVSQP--RPAAAGQI 291 P HG R G AP H V + PD R +T G S P RP A G Sbjct: 793 PPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP-APGST 851 Query: 292 RRP--GVHRGRDLQPDPAVLHP 351 P GV D +P P P Sbjct: 852 APPAHGVTSAPDTRPAPGSTAP 873 Score = 30.8 bits (68), Expect = 1.7 Identities = 27/82 (32%), Positives = 30/82 (36%), Gaps = 8/82 (9%) Frame = +1 Query: 130 PHVHGTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASAT----QGAVSQP--RPAAAGQI 291 P HG R G AP H V + PD R +T G S P RP A G Sbjct: 773 PPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP-APGST 831 Query: 292 RRP--GVHRGRDLQPDPAVLHP 351 P GV D +P P P Sbjct: 832 APPAHGVTSAPDTRPAPGSTAP 853 Score = 30.8 bits (68), Expect = 1.7 Identities = 27/82 (32%), Positives = 30/82 (36%), Gaps = 8/82 (9%) Frame = +1 Query: 130 PHVHGTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASAT----QGAVSQP--RPAAAGQI 291 P HG R G AP H V + PD R +T G S P RP A G Sbjct: 753 PPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP-APGST 811 Query: 292 RRP--GVHRGRDLQPDPAVLHP 351 P GV D +P P P Sbjct: 812 APPAHGVTSAPDTRPAPGSTAP 833 Score = 30.8 bits (68), Expect = 1.7 Identities = 27/82 (32%), Positives = 30/82 (36%), Gaps = 8/82 (9%) Frame = +1 Query: 130 PHVHGTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASAT----QGAVSQP--RPAAAGQI 291 P HG R G AP H V + PD R +T G S P RP A G Sbjct: 733 PPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP-APGST 791 Query: 292 RRP--GVHRGRDLQPDPAVLHP 351 P GV D +P P P Sbjct: 792 APPAHGVTSAPDTRPAPGSTAP 813 Score = 30.8 bits (68), Expect = 1.7 Identities = 27/82 (32%), Positives = 30/82 (36%), Gaps = 8/82 (9%) Frame = +1 Query: 130 PHVHGTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASAT----QGAVSQP--RPAAAGQI 291 P HG R G AP H V + PD R +T G S P RP A G Sbjct: 713 PPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP-APGST 771 Query: 292 RRP--GVHRGRDLQPDPAVLHP 351 P GV D +P P P Sbjct: 772 APPAHGVTSAPDTRPAPGSTAP 793 Score = 30.8 bits (68), Expect = 1.7 Identities = 27/82 (32%), Positives = 30/82 (36%), Gaps = 8/82 (9%) Frame = +1 Query: 130 PHVHGTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASAT----QGAVSQP--RPAAAGQI 291 P HG R G AP H V + PD R +T G S P RP A G Sbjct: 693 PPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP-APGST 751 Query: 292 RRP--GVHRGRDLQPDPAVLHP 351 P GV D +P P P Sbjct: 752 APPAHGVTSAPDTRPAPGSTAP 773 Score = 30.8 bits (68), Expect = 1.7 Identities = 27/82 (32%), Positives = 30/82 (36%), Gaps = 8/82 (9%) Frame = +1 Query: 130 PHVHGTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASAT----QGAVSQP--RPAAAGQI 291 P HG R G AP H V + PD R +T G S P RP A G Sbjct: 673 PPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP-APGST 731 Query: 292 RRP--GVHRGRDLQPDPAVLHP 351 P GV D +P P P Sbjct: 732 APPAHGVTSAPDTRPAPGSTAP 753 Score = 30.8 bits (68), Expect = 1.7 Identities = 27/82 (32%), Positives = 30/82 (36%), Gaps = 8/82 (9%) Frame = +1 Query: 130 PHVHGTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASAT----QGAVSQP--RPAAAGQI 291 P HG R G AP H V + PD R +T G S P RP A G Sbjct: 653 PPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP-APGST 711 Query: 292 RRP--GVHRGRDLQPDPAVLHP 351 P GV D +P P P Sbjct: 712 APPAHGVTSAPDTRPAPGSTAP 733 Score = 30.8 bits (68), Expect = 1.7 Identities = 27/82 (32%), Positives = 30/82 (36%), Gaps = 8/82 (9%) Frame = +1 Query: 130 PHVHGTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASAT----QGAVSQP--RPAAAGQI 291 P HG R G AP H V + PD R +T G S P RP A G Sbjct: 633 PPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP-APGST 691 Query: 292 RRP--GVHRGRDLQPDPAVLHP 351 P GV D +P P P Sbjct: 692 APPAHGVTSAPDTRPAPGSTAP 713 Score = 30.8 bits (68), Expect = 1.7 Identities = 27/82 (32%), Positives = 30/82 (36%), Gaps = 8/82 (9%) Frame = +1 Query: 130 PHVHGTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASAT----QGAVSQP--RPAAAGQI 291 P HG R G AP H V + PD R +T G S P RP A G Sbjct: 613 PPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP-APGST 671 Query: 292 RRP--GVHRGRDLQPDPAVLHP 351 P GV D +P P P Sbjct: 672 APPAHGVTSAPDTRPAPGSTAP 693 Score = 30.8 bits (68), Expect = 1.7 Identities = 27/82 (32%), Positives = 30/82 (36%), Gaps = 8/82 (9%) Frame = +1 Query: 130 PHVHGTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASAT----QGAVSQP--RPAAAGQI 291 P HG R G AP H V + PD R +T G S P RP A G Sbjct: 593 PPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP-APGST 651 Query: 292 RRP--GVHRGRDLQPDPAVLHP 351 P GV D +P P P Sbjct: 652 APPAHGVTSAPDTRPAPGSTAP 673 Score = 30.8 bits (68), Expect = 1.7 Identities = 27/82 (32%), Positives = 30/82 (36%), Gaps = 8/82 (9%) Frame = +1 Query: 130 PHVHGTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASAT----QGAVSQP--RPAAAGQI 291 P HG R G AP H V + PD R +T G S P RP A G Sbjct: 573 PPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP-APGST 631 Query: 292 RRP--GVHRGRDLQPDPAVLHP 351 P GV D +P P P Sbjct: 632 APPAHGVTSAPDTRPAPGSTAP 653 Score = 30.8 bits (68), Expect = 1.7 Identities = 27/82 (32%), Positives = 30/82 (36%), Gaps = 8/82 (9%) Frame = +1 Query: 130 PHVHGTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASAT----QGAVSQP--RPAAAGQI 291 P HG R G AP H V + PD R +T G S P RP A G Sbjct: 553 PPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP-APGST 611 Query: 292 RRP--GVHRGRDLQPDPAVLHP 351 P GV D +P P P Sbjct: 612 APPAHGVTSAPDTRPAPGSTAP 633 Score = 30.8 bits (68), Expect = 1.7 Identities = 27/82 (32%), Positives = 30/82 (36%), Gaps = 8/82 (9%) Frame = +1 Query: 130 PHVHGTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASAT----QGAVSQP--RPAAAGQI 291 P HG R G AP H V + PD R +T G S P RP A G Sbjct: 533 PPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP-APGST 591 Query: 292 RRP--GVHRGRDLQPDPAVLHP 351 P GV D +P P P Sbjct: 592 APPAHGVTSAPDTRPAPGSTAP 613 Score = 30.8 bits (68), Expect = 1.7 Identities = 27/82 (32%), Positives = 30/82 (36%), Gaps = 8/82 (9%) Frame = +1 Query: 130 PHVHGTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASAT----QGAVSQP--RPAAAGQI 291 P HG R G AP H V + PD R +T G S P RP A G Sbjct: 513 PPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP-APGST 571 Query: 292 RRP--GVHRGRDLQPDPAVLHP 351 P GV D +P P P Sbjct: 572 APPAHGVTSAPDTRPAPGSTAP 593 Score = 30.8 bits (68), Expect = 1.7 Identities = 27/82 (32%), Positives = 30/82 (36%), Gaps = 8/82 (9%) Frame = +1 Query: 130 PHVHGTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASAT----QGAVSQP--RPAAAGQI 291 P HG R G AP H V + PD R +T G S P RP A G Sbjct: 493 PPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP-APGST 551 Query: 292 RRP--GVHRGRDLQPDPAVLHP 351 P GV D +P P P Sbjct: 552 APPAHGVTSAPDTRPAPGSTAP 573 Score = 30.8 bits (68), Expect = 1.7 Identities = 27/82 (32%), Positives = 30/82 (36%), Gaps = 8/82 (9%) Frame = +1 Query: 130 PHVHGTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASAT----QGAVSQP--RPAAAGQI 291 P HG R G AP H V + PD R +T G S P RP A G Sbjct: 473 PPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP-APGST 531 Query: 292 RRP--GVHRGRDLQPDPAVLHP 351 P GV D +P P P Sbjct: 532 APPAHGVTSAPDTRPAPGSTAP 553 Score = 30.8 bits (68), Expect = 1.7 Identities = 27/82 (32%), Positives = 30/82 (36%), Gaps = 8/82 (9%) Frame = +1 Query: 130 PHVHGTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASAT----QGAVSQP--RPAAAGQI 291 P HG R G AP H V + PD R +T G S P RP A G Sbjct: 453 PPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP-APGST 511 Query: 292 RRP--GVHRGRDLQPDPAVLHP 351 P GV D +P P P Sbjct: 512 APPAHGVTSAPDTRPAPGSTAP 533 Score = 30.8 bits (68), Expect = 1.7 Identities = 27/82 (32%), Positives = 30/82 (36%), Gaps = 8/82 (9%) Frame = +1 Query: 130 PHVHGTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASAT----QGAVSQP--RPAAAGQI 291 P HG R G AP H V + PD R +T G S P RP A G Sbjct: 433 PPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP-APGST 491 Query: 292 RRP--GVHRGRDLQPDPAVLHP 351 P GV D +P P P Sbjct: 492 APPAHGVTSAPDTRPAPGSTAP 513 Score = 30.8 bits (68), Expect = 1.7 Identities = 27/82 (32%), Positives = 30/82 (36%), Gaps = 8/82 (9%) Frame = +1 Query: 130 PHVHGTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASAT----QGAVSQP--RPAAAGQI 291 P HG R G AP H V + PD R +T G S P RP A G Sbjct: 413 PPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP-APGST 471 Query: 292 RRP--GVHRGRDLQPDPAVLHP 351 P GV D +P P P Sbjct: 472 APPAHGVTSAPDTRPAPGSTAP 493 Score = 30.8 bits (68), Expect = 1.7 Identities = 27/82 (32%), Positives = 30/82 (36%), Gaps = 8/82 (9%) Frame = +1 Query: 130 PHVHGTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASAT----QGAVSQP--RPAAAGQI 291 P HG R G AP H V + PD R +T G S P RP A G Sbjct: 393 PPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP-APGST 451 Query: 292 RRP--GVHRGRDLQPDPAVLHP 351 P GV D +P P P Sbjct: 452 APPAHGVTSAPDTRPAPGSTAP 473 Score = 30.8 bits (68), Expect = 1.7 Identities = 27/82 (32%), Positives = 30/82 (36%), Gaps = 8/82 (9%) Frame = +1 Query: 130 PHVHGTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASAT----QGAVSQP--RPAAAGQI 291 P HG R G AP H V + PD R +T G S P RP A G Sbjct: 373 PPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP-APGST 431 Query: 292 RRP--GVHRGRDLQPDPAVLHP 351 P GV D +P P P Sbjct: 432 APPAHGVTSAPDTRPAPGSTAP 453 Score = 30.8 bits (68), Expect = 1.7 Identities = 27/82 (32%), Positives = 30/82 (36%), Gaps = 8/82 (9%) Frame = +1 Query: 130 PHVHGTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASAT----QGAVSQP--RPAAAGQI 291 P HG R G AP H V + PD R +T G S P RP A G Sbjct: 353 PPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP-APGST 411 Query: 292 RRP--GVHRGRDLQPDPAVLHP 351 P GV D +P P P Sbjct: 412 APPAHGVTSAPDTRPAPGSTAP 433 Score = 30.8 bits (68), Expect = 1.7 Identities = 27/82 (32%), Positives = 30/82 (36%), Gaps = 8/82 (9%) Frame = +1 Query: 130 PHVHGTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASAT----QGAVSQP--RPAAAGQI 291 P HG R G AP H V + PD R +T G S P RP A G Sbjct: 333 PPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP-APGST 391 Query: 292 RRP--GVHRGRDLQPDPAVLHP 351 P GV D +P P P Sbjct: 392 APPAHGVTSAPDTRPAPGSTAP 413 Score = 30.8 bits (68), Expect = 1.7 Identities = 27/82 (32%), Positives = 30/82 (36%), Gaps = 8/82 (9%) Frame = +1 Query: 130 PHVHGTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASAT----QGAVSQP--RPAAAGQI 291 P HG R G AP H V + PD R +T G S P RP A G Sbjct: 313 PPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP-APGST 371 Query: 292 RRP--GVHRGRDLQPDPAVLHP 351 P GV D +P P P Sbjct: 372 APPAHGVTSAPDTRPAPGSTAP 393 Score = 30.8 bits (68), Expect = 1.7 Identities = 27/82 (32%), Positives = 30/82 (36%), Gaps = 8/82 (9%) Frame = +1 Query: 130 PHVHGTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASAT----QGAVSQP--RPAAAGQI 291 P HG R G AP H V + PD R +T G S P RP A G Sbjct: 293 PPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP-APGST 351 Query: 292 RRP--GVHRGRDLQPDPAVLHP 351 P GV D +P P P Sbjct: 352 APPAHGVTSAPDTRPAPGSTAP 373 Score = 30.8 bits (68), Expect = 1.7 Identities = 27/82 (32%), Positives = 30/82 (36%), Gaps = 8/82 (9%) Frame = +1 Query: 130 PHVHGTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASAT----QGAVSQP--RPAAAGQI 291 P HG R G AP H V + PD R +T G S P RP A G Sbjct: 273 PPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP-APGST 331 Query: 292 RRP--GVHRGRDLQPDPAVLHP 351 P GV D +P P P Sbjct: 332 APPAHGVTSAPDTRPAPGSTAP 353 Score = 30.8 bits (68), Expect = 1.7 Identities = 27/82 (32%), Positives = 30/82 (36%), Gaps = 8/82 (9%) Frame = +1 Query: 130 PHVHGTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASAT----QGAVSQP--RPAAAGQI 291 P HG R G AP H V + PD R +T G S P RP A G Sbjct: 253 PPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP-APGST 311 Query: 292 RRP--GVHRGRDLQPDPAVLHP 351 P GV D +P P P Sbjct: 312 APPAHGVTSAPDTRPAPGSTAP 333 Score = 30.8 bits (68), Expect = 1.7 Identities = 27/82 (32%), Positives = 30/82 (36%), Gaps = 8/82 (9%) Frame = +1 Query: 130 PHVHGTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASAT----QGAVSQP--RPAAAGQI 291 P HG R G AP H V + PD R +T G S P RP A G Sbjct: 233 PPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP-APGST 291 Query: 292 RRP--GVHRGRDLQPDPAVLHP 351 P GV D +P P P Sbjct: 292 APPAHGVTSAPDTRPAPGSTAP 313 Score = 30.8 bits (68), Expect = 1.7 Identities = 27/82 (32%), Positives = 30/82 (36%), Gaps = 8/82 (9%) Frame = +1 Query: 130 PHVHGTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASAT----QGAVSQP--RPAAAGQI 291 P HG R G AP H V + PD R +T G S P RP A G Sbjct: 213 PPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP-APGST 271 Query: 292 RRP--GVHRGRDLQPDPAVLHP 351 P GV D +P P P Sbjct: 272 APPAHGVTSAPDTRPAPGSTAP 293 Score = 30.8 bits (68), Expect = 1.7 Identities = 27/82 (32%), Positives = 30/82 (36%), Gaps = 8/82 (9%) Frame = +1 Query: 130 PHVHGTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASAT----QGAVSQP--RPAAAGQI 291 P HG R G AP H V + PD R +T G S P RP A G Sbjct: 193 PPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP-APGST 251 Query: 292 RRP--GVHRGRDLQPDPAVLHP 351 P GV D +P P P Sbjct: 252 APPAHGVTSAPDTRPAPGSTAP 273 Score = 30.8 bits (68), Expect = 1.7 Identities = 27/82 (32%), Positives = 30/82 (36%), Gaps = 8/82 (9%) Frame = +1 Query: 130 PHVHGTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASAT----QGAVSQP--RPAAAGQI 291 P HG R G AP H V + PD R +T G S P RP A G Sbjct: 173 PPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP-APGST 231 Query: 292 RRP--GVHRGRDLQPDPAVLHP 351 P GV D +P P P Sbjct: 232 APPAHGVTSAPDTRPAPGSTAP 253 Score = 30.8 bits (68), Expect = 1.7 Identities = 27/82 (32%), Positives = 30/82 (36%), Gaps = 8/82 (9%) Frame = +1 Query: 130 PHVHGTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASAT----QGAVSQP--RPAAAGQI 291 P HG R G AP H V + PD R +T G S P RP A G Sbjct: 153 PPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP-APGST 211 Query: 292 RRP--GVHRGRDLQPDPAVLHP 351 P GV D +P P P Sbjct: 212 APPAHGVTSAPDTRPAPGSTAP 233 Score = 30.8 bits (68), Expect = 1.7 Identities = 27/82 (32%), Positives = 30/82 (36%), Gaps = 8/82 (9%) Frame = +1 Query: 130 PHVHGTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASAT----QGAVSQP--RPAAAGQI 291 P HG R G AP H V + PD R +T G S P RP A G Sbjct: 133 PPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRP-APGST 191 Query: 292 RRP--GVHRGRDLQPDPAVLHP 351 P GV D +P P P Sbjct: 192 APPAHGVTSAPDTRPAPGSTAP 213 Score = 28.5 bits (62), Expect = 8.2 Identities = 20/64 (31%), Positives = 22/64 (34%), Gaps = 4/64 (6%) Frame = +1 Query: 130 PHVHGTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASAT----QGAVSQPRPAAAGQIRR 297 P HG R G AP H V + PD R +T G S P A Sbjct: 893 PPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDTRPAPGSTAPPAHGVTSAPDNRPALGSTA 952 Query: 298 PGVH 309 P VH Sbjct: 953 PPVH 956
>YJJX_ECO57 (Q8XB14) UPF0244 protein yjjX| Length = 170 Score = 30.4 bits (67), Expect = 2.2 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = +2 Query: 275 RLLAKSDALACTEAGIYSLTPLSYILVDGVLIDGEARQVAFPL 403 RLL ++D EAGI + S+++++ GEAR PL Sbjct: 64 RLLPEADFWVAIEAGIDGDSTFSWVVIENTTQRGEARSATLPL 106
>SWC4_NEUCR (Q870Q1) SWR1-complex protein 4| Length = 771 Score = 30.4 bits (67), Expect = 2.2 Identities = 19/48 (39%), Positives = 23/48 (47%) Frame = +2 Query: 155 AIELGIPTAIQRLGGTASLPDLMAALSLPPPKAPFLSRVLRLLAKSDA 298 A E G+P A TA+LP AA++ P P SR L A S A Sbjct: 337 APENGVPPAAAAAAATAALPPAAAAVAAAPEVPPAASRRESLAASSTA 384
>CO9A1_HUMAN (P20849) Collagen alpha-1(IX) chain precursor| Length = 921 Score = 30.4 bits (67), Expect = 2.2 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Frame = +1 Query: 178 GDPAPRRHRVVAGPDGRAVASATQGAVSQPRP-AAAGQIRRPGVHRGRDLQPDPAVLHPR 354 G+P P+ + +G +G A G + P P +AG PG+ + P V PR Sbjct: 670 GEPGPKGEQGASGEEGEAGERGELGDIGLPGPKGSAGNPGEPGLRGPEGSRGLPGVEGPR 729 Query: 355 G 357 G Sbjct: 730 G 730
>K1H5_HUMAN (Q92764) Keratin, type I cuticular Ha5 (Hair keratin, type I Ha5)| Length = 425 Score = 30.4 bits (67), Expect = 2.2 Identities = 16/44 (36%), Positives = 24/44 (54%) Frame = +2 Query: 47 AQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPT 178 AQ Q M +AQL + +ADL+R + Y + +R +E I T Sbjct: 323 AQMQCMITNVEAQLAEIRADLERQNQEYQVLLDVRARLECEINT 366
>PUR6_PYRAB (Q9UY68) Phosphoribosylaminoimidazole carboxylase catalytic subunit| (EC 4.1.1.21) (AIR carboxylase) (AIRC) Length = 174 Score = 30.4 bits (67), Expect = 2.2 Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Frame = +2 Query: 149 RCAIELGIPTAIQRLGGTASLPDLMAALS-LPPPKAPFLSRVLRLLAKSDALACTEAGIY 325 R A E GI I GG A LP ++AAL+ +P P S+ L L ++ GI Sbjct: 55 RTAEERGIEVIIAGAGGAAHLPGVLAALTMIPVIGVPIKSKALNGLDSLLSIVQMPPGI- 113 Query: 326 SLTPLSYILVDG 361 P++ + +DG Sbjct: 114 ---PVATVGIDG 122
>CO2A1_MOUSE (P28481) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1459 Score = 30.0 bits (66), Expect = 2.8 Identities = 17/46 (36%), Positives = 21/46 (45%) Frame = +1 Query: 172 PDGDPAPRRHRVVAGPDGRAVASATQGAVSQPRPAAAGQIRRPGVH 309 P G P P+ V GP G A GA P AAG++ PG + Sbjct: 840 PSGAPGPQGPTGVTGPKGARGAQGPPGATG--FPGAAGRVGPPGAN 883
>YJJX_ECOLI (P39411) UPF0244 protein yjjX| Length = 170 Score = 30.0 bits (66), Expect = 2.8 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = +2 Query: 275 RLLAKSDALACTEAGIYSLTPLSYILVDGVLIDGEARQVAFPL 403 RLL ++D EAGI + S+++++ GEAR PL Sbjct: 64 RLLPEADFWVAIEAGIDGDSTFSWVVIENASQRGEARSATLPL 106
>RECF_RHIME (P56903) DNA replication and repair protein recF| Length = 374 Score = 30.0 bits (66), Expect = 2.8 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Frame = -1 Query: 406 GQRKGHLPSLAVDEYAIHEDVGQRGQAVD--PGLGAR 302 G GH P L +DE A H D G+R D GLG + Sbjct: 308 GDMTGHAPVLLLDEIAAHLDQGRRAALFDLVDGLGGQ 344
>GSPE_XANCP (P31742) General secretion pathway protein E (Type II traffic| warden ATPase) Length = 567 Score = 30.0 bits (66), Expect = 2.8 Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 2/94 (2%) Frame = +2 Query: 176 TAIQRLGGTASLPDLMAALSLPPPKAPFLSRVLRLLAKSDALACTEAGIYSLTPLSYIL- 352 T ++ G AS D + AL +AP + V ++ + L ++ I + Sbjct: 157 TIVETADGDASSTDDIEALRDLASEAPVIRLVNLVIQHAVELRASDIHIEPFESRLKVRY 216 Query: 353 -VDGVLIDGEARQVAFPLAVTSRYHMESGLGLAD 451 VDGVL++GE+ AV SR + + L +A+ Sbjct: 217 RVDGVLVEGESPPAKLTAAVISRIKIMAKLNIAE 250
>YJJX_ECOL6 (Q8FA41) UPF0244 protein yjjX| Length = 175 Score = 30.0 bits (66), Expect = 2.8 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = +2 Query: 275 RLLAKSDALACTEAGIYSLTPLSYILVDGVLIDGEARQVAFPL 403 RLL ++D EAGI + S+++++ GEAR PL Sbjct: 64 RLLPEADFWVAIEAGIDGDSTFSWVVIENTSQRGEARSATLPL 106
>GLT3_WHEAT (P08488) Glutenin, high molecular weight subunit 12 precursor| Length = 660 Score = 30.0 bits (66), Expect = 2.8 Identities = 16/43 (37%), Positives = 25/43 (58%) Frame = -1 Query: 400 RKGHLPSLAVDEYAIHEDVGQRGQAVDPGLGARQGVGFGQQPQ 272 ++GH P+ ++ + + +GQ GQ PG G Q G GQQP+ Sbjct: 376 QQGHYPT-SLQQLGQGQQIGQPGQKQQPGQG--QQTGQGQQPE 415
>YQ35_CAEEL (Q09456) Putative cuticle collagen C09G5.5| Length = 317 Score = 30.0 bits (66), Expect = 2.8 Identities = 21/69 (30%), Positives = 30/69 (43%) Frame = +1 Query: 151 VRHRARHPDGDPAPRRHRVVAGPDGRAVASATQGAVSQPRPAAAGQIRRPGVHRGRDLQP 330 VR + + + P+ AGP G AS +G QP P AG+ +PGV Q Sbjct: 71 VRRQKKQSQCNCGPQASNCPAGPPGPPGASGDRGLDGQPGP--AGKPGQPGVAGPAHHQQ 128 Query: 331 DPAVLHPRG 357 + P+G Sbjct: 129 QECIKCPQG 137
>SYN1_MOUSE (O88935) Synapsin-1 (Synapsin I)| Length = 706 Score = 30.0 bits (66), Expect = 2.8 Identities = 19/53 (35%), Positives = 22/53 (41%) Frame = +1 Query: 142 GTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASATQGAVSQPRPAAAGQIRRP 300 G Q + + P G P R AGP R TQ QPRP+ G RP Sbjct: 584 GQQRQGPPQKPPGPAGPTRQASQAGPGPRTGPPTTQ----QPRPSGPGPAGRP 632
>CO7A1_HUMAN (Q02388) Collagen alpha-1(VII) chain precursor (Long-chain collagen)| (LC collagen) Length = 2944 Score = 30.0 bits (66), Expect = 2.8 Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 4/66 (6%) Frame = +1 Query: 172 PDGDPAPRRHRVVAGPDGRAVASATQGAVSQP----RPAAAGQIRRPGVHRGRDLQPDPA 339 P GDP GP G ++ +G P RP + G+ PG L+ P Sbjct: 1270 PPGDPGLPGRTGAPGPQGPPGSATAKGERGFPGADGRPGSPGRAGNPGTPGAPGLKGSPG 1329 Query: 340 VLHPRG 357 + PRG Sbjct: 1330 LPGPRG 1335
>CO2A1_RAT (P05539) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1419 Score = 29.6 bits (65), Expect = 3.7 Identities = 17/44 (38%), Positives = 20/44 (45%) Frame = +1 Query: 172 PDGDPAPRRHRVVAGPDGRAVASATQGAVSQPRPAAAGQIRRPG 303 P G P P+ V GP G A GA P AAG++ PG Sbjct: 800 PSGAPGPQGPTGVTGPKGARGAQGPPGATG--FPGAAGRVGPPG 841
>SIVA_MOUSE (O54926) Apoptosis regulatory protein Siva (CD27-binding protein)| (CD27BP) Length = 175 Score = 29.6 bits (65), Expect = 3.7 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%) Frame = +1 Query: 178 GDPAPRRHRVVAGPDGRAV---ASATQGAVSQPRPAAAGQIRR 297 G P P R +++ GPDGR A A++G + + P A R Sbjct: 77 GAPQPARGQMLIGPDGRLTRCQAQASEGGLPRTAPIACSSCMR 119
>SIVA_HUMAN (O15304) Apoptosis regulatory protein Siva (CD27-binding protein)| (CD27BP) Length = 175 Score = 29.6 bits (65), Expect = 3.7 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = +1 Query: 172 PDGDPAPRRHRVVAGPDGRAVASATQGAVSQPRPAAA 282 P G P R +++ GPDGR + S Q + + P A+ Sbjct: 75 PTGAPRAARGQMLIGPDGRLIRSLGQASEADPSGVAS 111
>RPOB_SALTY (P06173) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1342 Score = 29.6 bits (65), Expect = 3.7 Identities = 21/68 (30%), Positives = 32/68 (47%) Frame = +2 Query: 14 EHQESDREIMAAQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRL 193 EH +++R +M A Q VPT ++A L T M A++ G+ TA+ + Sbjct: 672 EHDDANRALMGANMQRQAVPT----LRADKPLVG------TGMERAVAVDSGV-TAVAKR 720 Query: 194 GGTASLPD 217 GGT D Sbjct: 721 GGTVQYVD 728
>RPOB_SALTI (Q8Z320) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1342 Score = 29.6 bits (65), Expect = 3.7 Identities = 21/68 (30%), Positives = 32/68 (47%) Frame = +2 Query: 14 EHQESDREIMAAQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRL 193 EH +++R +M A Q VPT ++A L T M A++ G+ TA+ + Sbjct: 672 EHDDANRALMGANMQRQAVPT----LRADKPLVG------TGMERAVAVDSGV-TAVAKR 720 Query: 194 GGTASLPD 217 GGT D Sbjct: 721 GGTVQYVD 728
>RPOB_SALPA (Q5PK93) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1342 Score = 29.6 bits (65), Expect = 3.7 Identities = 21/68 (30%), Positives = 32/68 (47%) Frame = +2 Query: 14 EHQESDREIMAAQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRL 193 EH +++R +M A Q VPT ++A L T M A++ G+ TA+ + Sbjct: 672 EHDDANRALMGANMQRQAVPT----LRADKPLVG------TGMERAVAVDSGV-TAVAKR 720 Query: 194 GGTASLPD 217 GGT D Sbjct: 721 GGTVQYVD 728
>RPOB_SALCH (Q57H69) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1342 Score = 29.6 bits (65), Expect = 3.7 Identities = 21/68 (30%), Positives = 32/68 (47%) Frame = +2 Query: 14 EHQESDREIMAAQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRL 193 EH +++R +M A Q VPT ++A L T M A++ G+ TA+ + Sbjct: 672 EHDDANRALMGANMQRQAVPT----LRADKPLVG------TGMERAVAVDSGV-TAVAKR 720 Query: 194 GGTASLPD 217 GGT D Sbjct: 721 GGTVQYVD 728
>RPOB_ERWCT (Q6DAN0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1342 Score = 29.6 bits (65), Expect = 3.7 Identities = 21/68 (30%), Positives = 32/68 (47%) Frame = +2 Query: 14 EHQESDREIMAAQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRL 193 EH +++R +M A Q VPT ++A L T M A++ G+ TA+ + Sbjct: 672 EHDDANRALMGANMQRQAVPT----LRADKPLVG------TGMERAVAVDSGV-TAVAKR 720 Query: 194 GGTASLPD 217 GGT D Sbjct: 721 GGTVQYVD 728
>CO2A1_HUMAN (P02458) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1418 Score = 29.6 bits (65), Expect = 3.7 Identities = 17/44 (38%), Positives = 20/44 (45%) Frame = +1 Query: 172 PDGDPAPRRHRVVAGPDGRAVASATQGAVSQPRPAAAGQIRRPG 303 P G P P+ V GP G A GA P AAG++ PG Sbjct: 799 PSGAPGPQGPTGVTGPKGARGAQGPPGATG--FPGAAGRVGPPG 840
>CO1A2_RAT (P02466) Collagen alpha-2(I) chain precursor| Length = 1372 Score = 29.6 bits (65), Expect = 3.7 Identities = 21/57 (36%), Positives = 22/57 (38%) Frame = -3 Query: 341 TAGSGCRSRPRCTPGRRIWPAAAGRG*ETAPWVAEATARPSGPATTRCRRGAGSPSG 171 TAG + R PG P AG E P A PSGP R GA P G Sbjct: 569 TAGEVGKPGERGLPGEFGLPGPAGPRGERGPPGESGAAGPSGPIGIRGPSGAPGPDG 625
>SYN1_HUMAN (P17600) Synapsin-1 (Synapsin I) (Brain protein 4.1)| Length = 705 Score = 29.3 bits (64), Expect = 4.8 Identities = 19/53 (35%), Positives = 22/53 (41%) Frame = +1 Query: 142 GTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASATQGAVSQPRPAAAGQIRRP 300 G Q + + P G P R AGP R TQ QPRP+ G RP Sbjct: 584 GQQRQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQ----QPRPSGPGPAGRP 632
>MTC1_COREQ (P42828) Modification methylase CeqI (EC 2.1.1.72)| (Adenine-specific methyltransferase CeqI) (M.CeqI) Length = 517 Score = 29.3 bits (64), Expect = 4.8 Identities = 26/75 (34%), Positives = 31/75 (41%), Gaps = 12/75 (16%) Frame = -3 Query: 341 TAGSGCRSRPRCTPGRRIWPAAAGRG*ETAPWVAEATARP---------SGPATTRCRRG 189 T+ +GC SRPR GR WP + R E RP GP + R RRG Sbjct: 4 TSSAGCASRPR---GRGRWPRLSRRS-----GCLEVPGRPRRPFLRPTVPGPTSARPRRG 55 Query: 188 AGSPSGCRAR---WR 153 +P G R WR Sbjct: 56 R-APHGRSTRCTGWR 69
>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2| Length = 969 Score = 29.3 bits (64), Expect = 4.8 Identities = 24/68 (35%), Positives = 26/68 (38%), Gaps = 1/68 (1%) Frame = +1 Query: 154 RHRARHPDGDPAPRRHRVVAGP-DGRAVASATQGAVSQPRPAAAGQIRRPGVHRGRDLQP 330 R R G PR GP G + GA PRPAAA RPG R P Sbjct: 191 RERPAARPGPGGPRPGPAQGGPRPGPGQGAPRPGATPGPRPAAAQGGPRPGGPR-----P 245 Query: 331 DPAVLHPR 354 P + PR Sbjct: 246 SPGSMPPR 253
>CO4A6_HUMAN (Q14031) Collagen alpha-6(IV) chain precursor| Length = 1691 Score = 29.3 bits (64), Expect = 4.8 Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Frame = +1 Query: 169 HPDGDPAPRRHRVVAGPDGRAVASATQGAVSQPRP-AAAGQIRRPGVHRGRDLQPDPAVL 345 HP G P PR GP G + TQGAV P P G + PG+ + + DP VL Sbjct: 111 HP-GQPGPR------GPPGLDGCNGTQGAVGFPGPDGYPGLLGPPGLPGQKGSKGDP-VL 162 Query: 346 HPRGWR 363 P ++ Sbjct: 163 APGSFK 168
>SYN1_RAT (P09951) Synapsin-1 (Synapsin I)| Length = 704 Score = 29.3 bits (64), Expect = 4.8 Identities = 19/53 (35%), Positives = 22/53 (41%) Frame = +1 Query: 142 GTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASATQGAVSQPRPAAAGQIRRP 300 G Q + + P G P R AGP R TQ QPRP+ G RP Sbjct: 582 GQQRQGPPQKPPGPAGPIRQASQAGPGPRTGPPTTQ----QPRPSGPGPAGRP 630
>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2| Length = 1033 Score = 29.3 bits (64), Expect = 4.8 Identities = 23/56 (41%), Positives = 24/56 (42%), Gaps = 6/56 (10%) Frame = -3 Query: 314 PRCTPGRRIWPAAAGRG*E-TAPWVAEATAR-----PSGPATTRCRRGAGSPSGCR 165 PR TPG + P A E TAP A A PSGP R GA P G R Sbjct: 125 PRPTPGPKPAPRPAPAAPEFTAPPAAPAAPSTPAPAPSGPKPGGARPGAPKPGGAR 180
>IF2_MYCPA (Q73VV4) Translation initiation factor IF-2| Length = 925 Score = 29.3 bits (64), Expect = 4.8 Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 2/46 (4%) Frame = +1 Query: 223 GRAVASATQGAVSQPRPAAAGQIRRPGVHRG--RDLQPDPAVLHPR 354 G A A + A QP+P A GQ RPG G P PA PR Sbjct: 131 GPAAARPSAPAPGQPKPPAPGQPPRPGATPGPRPGPAPKPAARTPR 176
>SYN1_CANFA (O62732) Synapsin-1 (Synapsin I) (Fragment)| Length = 415 Score = 29.3 bits (64), Expect = 4.8 Identities = 19/53 (35%), Positives = 22/53 (41%) Frame = +1 Query: 142 GTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASATQGAVSQPRPAAAGQIRRP 300 G Q + + P G P R AGP R TQ QPRP+ G RP Sbjct: 312 GQQRQGPPQKPPGPAGPTRQASQAGPMPRTGPPTTQ----QPRPSGPGPAGRP 360
>PRGR_CANFA (Q9GLW0) Progesterone receptor (PR)| Length = 939 Score = 29.3 bits (64), Expect = 4.8 Identities = 15/44 (34%), Positives = 19/44 (43%) Frame = -3 Query: 302 PGRRIWPAAAGRG*ETAPWVAEATARPSGPATTRCRRGAGSPSG 171 P + PA G+G + W + PSGP RGA S G Sbjct: 126 PSTALRPAGPGQGRSSPAWEPRSPRCPSGPEPPEDPRGARSSQG 169
>NPTXR_RAT (O35764) Neuronal pentraxin receptor| Length = 494 Score = 29.3 bits (64), Expect = 4.8 Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 3/36 (8%) Frame = +2 Query: 176 TAIQRLGGTAS---LPDLMAALSLPPPKAPFLSRVL 274 +A+Q GG+A LP AA PPP P LSR L Sbjct: 59 SALQGAGGSAGPSVLPGEPAASVFPPPPGPLLSRFL 94
>IF2_PROAC (Q6A7M5) Translation initiation factor IF-2| Length = 964 Score = 29.3 bits (64), Expect = 4.8 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = +3 Query: 285 PNPTPWRAPRPGSTA*PRCPTSSWMAYSSTARLG 386 P P P PRPGS++ P+ SS S+T R G Sbjct: 93 PGPKPTPGPRPGSSSGPKPGRSSAARTSATPRPG 126
>SYN1_BOVIN (P17599) Synapsin-1 (Synapsin I)| Length = 706 Score = 29.3 bits (64), Expect = 4.8 Identities = 19/53 (35%), Positives = 22/53 (41%) Frame = +1 Query: 142 GTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASATQGAVSQPRPAAAGQIRRP 300 G Q + + P G P R AGP R TQ QPRP+ G RP Sbjct: 584 GQQRQGPPQKPPGPAGPTRQASQAGPMPRTGPPTTQ----QPRPSGPGPAGRP 632
>RPOC1_CHAGL (Q8MA11) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP)| (Plastid-encoded RNA polymerase beta' subunit) (RNA polymerase beta' subunit) Length = 661 Score = 29.3 bits (64), Expect = 4.8 Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 20/108 (18%) Frame = +2 Query: 155 AIELGIPTAIQRLGGTASLPDLMAALSLPPPKAPFLSRVLRLLAKSDALACTEA------ 316 AIEL P I+ L P+L AA S+ + P + ++L + K+ + A Sbjct: 402 AIELFQPFIIRDLINCQLAPNLRAARSMIQNQEPIIFKILEKIIKNHPILLNRAPTLHRL 461 Query: 317 GIYSLTPLSYILVDGVLI--------------DGEARQVAFPLAVTSR 418 GI + P ILV+G+ I DG+ V PL++ ++ Sbjct: 462 GIQAFQP---ILVEGLAIRLHPLVCGGFNADFDGDQMAVHIPLSLEAQ 506
>IMT1_MESCR (P45986) Inositol 4-methyltransferase (EC 2.1.1.129)| Length = 365 Score = 29.3 bits (64), Expect = 4.8 Identities = 33/115 (28%), Positives = 45/115 (39%), Gaps = 10/115 (8%) Frame = +2 Query: 140 MALRCAIELGIPTAIQRLGGTA--SLPDLMAALSLPPPKAP-FLSRVLRLLAKSDALACT 310 M L+ A EL I + G S ++ + + P AP L R+LRLLA L C Sbjct: 36 MILKSAFELKILDIFSKAGEGVFVSTSEIASQIGAKNPNAPVLLDRMLRLLASHSVLTCK 95 Query: 311 ----EAG---IYSLTPLSYILVDGVLIDGEARQVAFPLAVTSRYHMESGLGLADW 454 E G +Y PL L DG+ + + MES L D+ Sbjct: 96 LQKGEGGSQRVYGPAPLCNYLASN---DGQGSLGPLLVLHHDKVMMESWFHLNDY 147
>YJJX_SALTY (P39432) UPF0244 protein yjjX| Length = 171 Score = 28.9 bits (63), Expect = 6.3 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Frame = +2 Query: 275 RLLAKSDALACTEAGIYSLTPLSYILVDGVLIDGEARQVAFPL--AVTSRYHMESGLG 442 RL ++D EAGI S++++D + GEAR PL + R LG Sbjct: 64 RLHPQADFWVAIEAGIDDDATFSWVVIDNGVQRGEARSATLPLPAVILDRVRQGEALG 121
>YJJX_SALPA (Q5PK30) UPF0244 protein yjjX| Length = 171 Score = 28.9 bits (63), Expect = 6.3 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Frame = +2 Query: 275 RLLAKSDALACTEAGIYSLTPLSYILVDGVLIDGEARQVAFPL--AVTSRYHMESGLG 442 RL ++D EAGI S++++D + GEAR PL + R LG Sbjct: 64 RLHPQADFWVAIEAGIDDDATFSWVVIDNGVQRGEARSATLPLPAVILDRVRQGEALG 121
>YJJX_SALCH (Q57G27) UPF0244 protein yjjX| Length = 171 Score = 28.9 bits (63), Expect = 6.3 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Frame = +2 Query: 275 RLLAKSDALACTEAGIYSLTPLSYILVDGVLIDGEARQVAFPL--AVTSRYHMESGLG 442 RL ++D EAGI S++++D + GEAR PL + R LG Sbjct: 64 RLHPQADFWVAIEAGIDDDATFSWVVIDNGVQRGEARSATLPLPAVILDRVRQGEALG 121
>CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor| Length = 1466 Score = 28.9 bits (63), Expect = 6.3 Identities = 26/79 (32%), Positives = 29/79 (36%), Gaps = 9/79 (11%) Frame = +1 Query: 127 LPHVHGTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASATQGAVSQPRPA-------AAG 285 LP G + AR DG P P GP G A + GA + PA A G Sbjct: 313 LPGAAGARGNDGARGSDGQPGP------PGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPG 366 Query: 286 QIRRPGV--HRGRDLQPDP 336 Q PG H G P P Sbjct: 367 QRGEPGPQGHAGAQGPPGP 385
>YGY3_HALSQ (P21561) Hypothetical 50.6 kDa protein in the 5'region of gyrA and| gyrB (ORF 3) Length = 437 Score = 28.9 bits (63), Expect = 6.3 Identities = 32/111 (28%), Positives = 37/111 (33%), Gaps = 19/111 (17%) Frame = +1 Query: 43 GSSVPNNDSPHRRXXXXXXXXXXXXXXHLPHVHGTQVRHRARHPDGD-PAP-----RRHR 204 G P + RR H H + R R RH +G PA RR R Sbjct: 306 GDFAPQGEDSERRETPPRPHSRKRRDTGAHHRHWRRRRRRVRHREGALPAAHPDDRRRRR 365 Query: 205 VVAGPDGRAVASATQGAVSQ-------------PRPAAAGQIRRPGVHRGR 318 A PD A AS A + PRP +RR G RGR Sbjct: 366 RRAHPDAAAYASVPAHAPAHRGRLRVRGSTAAVPRPLPRQHLRRDG--RGR 414
>JHD3D_HUMAN (Q6B0I6) JmjC domain-containing histone demethylation protein 3D| (EC 1.14.11.-) (Jumonji domain-containing protein 2D) Length = 520 Score = 28.9 bits (63), Expect = 6.3 Identities = 22/73 (30%), Positives = 28/73 (38%), Gaps = 4/73 (5%) Frame = +1 Query: 157 HRARHPDGDPAPRR----HRVVAGPDGRAVASATQGAVSQPRPAAAGQIRRPGVHRGRDL 324 H ARH A R H +V R SA G +QPR AA ++P Sbjct: 377 HWARHSPWPMAARSGTRCHTLVCSSLPRR--SAVSGTATQPRAAAVHSSKKPSSTPSSTP 434 Query: 325 QPDPAVLHPRGWR 363 P ++HP R Sbjct: 435 GPSAQIIHPSNGR 447
>HERC2_DROME (Q9VR91) HECT domain and RCC1-like domain-containing protein 2| Length = 4912 Score = 28.9 bits (63), Expect = 6.3 Identities = 21/86 (24%), Positives = 40/86 (46%) Frame = +2 Query: 26 SDREIMAAQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRLGGTA 205 SDR +++ S + + L+ ++ ++ S+ + AL +LG T QR+ Sbjct: 3766 SDRAVLSQPSMALVM----SLLDSRLAPRQPSVLLRLASALAACSQLGALTTAQRIWSLR 3821 Query: 206 SLPDLMAALSLPPPKAPFLSRVLRLL 283 L ++ P P+ P LS +L+ L Sbjct: 3822 KLHAVLLLEQAPRPQDPSLSTLLQPL 3847
>SI1L2_RAT (Q5JCS6) Signal-induced proliferation-associated 1-like protein 2| (Serine-rich synapse-associated protein) Length = 1722 Score = 28.9 bits (63), Expect = 6.3 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = +1 Query: 217 PDGRAVASATQGAVSQPRPAAAGQIRRPGVHRGRDLQPDPAVLHPRG 357 PDG + + Q + S P P +G RP V G D P P +L P+G Sbjct: 1115 PDGTRSSPSNQSSSSDPGPGGSGP-WRPQV--GYDGCPSPLLLEPQG 1158
>COBA1_HUMAN (P12107) Collagen alpha-1(XI) chain precursor| Length = 1806 Score = 28.9 bits (63), Expect = 6.3 Identities = 19/66 (28%), Positives = 25/66 (37%) Frame = +1 Query: 163 ARHPDGDPAPRRHRVVAGPDGRAVASATQGAVSQPRPAAAGQIRRPGVHRGRDLQPDPAV 342 A+ GDP P+ R V GP G +G RPG GR + +P Sbjct: 551 AKGESGDPGPQGPRGVQGPPGPTGKPGKRG--------------RPGADGGRGMPGEPGA 596 Query: 343 LHPRGW 360 RG+ Sbjct: 597 KGDRGF 602
>CO1A2_BOVIN (P02465) Collagen alpha-2(I) chain precursor| Length = 1364 Score = 28.9 bits (63), Expect = 6.3 Identities = 19/57 (33%), Positives = 22/57 (38%) Frame = -3 Query: 341 TAGSGCRSRPRCTPGRRIWPAAAGRG*ETAPWVAEATARPSGPATTRCRRGAGSPSG 171 TAG + R PG P AG E P A P+GP +R G P G Sbjct: 561 TAGEAGKPGERGIPGEFGLPGPAGARGERGPPGESGAAGPTGPIGSRGPSGPPGPDG 617
>IF2_SYNP6 (Q5N0A5) Translation initiation factor IF-2| Length = 1030 Score = 28.9 bits (63), Expect = 6.3 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%) Frame = +1 Query: 184 PAPRRHRVVAGPDGRAVASATQGAVSQ---PRPAAAGQIRRPGVHRGRDLQPD 333 PAP A R +AT V++ P+PAAA +R+P + R + +P+ Sbjct: 151 PAPAASAEPAKSPSRPAPAATPRPVAETKKPKPAAAELLRKPEIVRRSEAKPE 203
>Y248_CHLMU (Q9PL60) Hypothetical protein TC0248| Length = 601 Score = 28.9 bits (63), Expect = 6.3 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = -3 Query: 224 PSGPATTRCRRGAGSPSGCRARWR 153 PSG T + RR +GS RA+WR Sbjct: 186 PSGRITLKVRRSSGSVKDVRAKWR 209
>SCAR3_HUMAN (Q6AZY7) Scavenger receptor class A member 3 (Cellular stress| response gene protein) Length = 606 Score = 28.9 bits (63), Expect = 6.3 Identities = 19/76 (25%), Positives = 30/76 (39%) Frame = +1 Query: 130 PHVHGTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASATQGAVSQPRPAAAGQIRRPGVH 309 P + G++ P G P P+ GP+G + G Q +P AG+ PG Sbjct: 519 PGLKGSKGSFGTGGPRGQPGPKGDIGPPGPEGPPGSPGPSG--PQGKPGIAGKTGSPGQR 576 Query: 310 RGRDLQPDPAVLHPRG 357 + +P + P G Sbjct: 577 GAMGPKGEPGIQGPPG 592
>CO1A2_CANFA (O46392) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 28.5 bits (62), Expect = 8.2 Identities = 20/57 (35%), Positives = 22/57 (38%) Frame = -3 Query: 341 TAGSGCRSRPRCTPGRRIWPAAAGRG*ETAPWVAEATARPSGPATTRCRRGAGSPSG 171 TAG + R PG P AG E P A PSGP +R G P G Sbjct: 563 TAGEVGKPGERGLPGEFGLPGPAGPRGERGPPGESGAAGPSGPIGSRGPSGPPGPDG 619
>PUR6_SYNY3 (Q55498) Phosphoribosylaminoimidazole carboxylase catalytic subunit| (EC 4.1.1.21) (AIR carboxylase) (AIRC) Length = 176 Score = 28.5 bits (62), Expect = 8.2 Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 4/89 (4%) Frame = +2 Query: 23 ESDREIMAAQ---SQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRL 193 +SD MAA + VPT+ +I A +R + A + A + G+ I Sbjct: 15 DSDLPTMAAAIAVCEEFAVPTEVAIISAHRTPER-----MVEYA-QTAHQRGLRIIIAGA 68 Query: 194 GGTASLPDLMAALS-LPPPKAPFLSRVLR 277 GG A LP ++AAL+ LP P ++ L+ Sbjct: 69 GGAAHLPGMVAALTPLPVIGVPVQTKTLQ 97
>SPP2_USTMA (Q4P9X4) Pre-mRNA-splicing factor SPP2| Length = 417 Score = 28.5 bits (62), Expect = 8.2 Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 3/44 (6%) Frame = -1 Query: 373 VDEYAIHEDVGQRGQAVDPGLGARQGVGF---GQQPQDAAEKRR 251 +D+YA + Q G A+ G+G ++G+G G+ PQ AAE R+ Sbjct: 219 LDDYAA-TPIDQFGMALLRGMGWKEGMGAGKGGKGPQQAAEPRK 261
>RPOB_YERPS (Q66FQ2) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1342 Score = 28.5 bits (62), Expect = 8.2 Identities = 20/68 (29%), Positives = 32/68 (47%) Frame = +2 Query: 14 EHQESDREIMAAQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRL 193 EH +++R +M A Q VPT ++A L T M A++ G+ T++ + Sbjct: 672 EHDDANRALMGANMQRQAVPT----LRADKPLVG------TGMERAVAVDSGV-TSVAKR 720 Query: 194 GGTASLPD 217 GGT D Sbjct: 721 GGTVQYVD 728
>RPOB_YERPE (Q8ZAP5) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1342 Score = 28.5 bits (62), Expect = 8.2 Identities = 20/68 (29%), Positives = 32/68 (47%) Frame = +2 Query: 14 EHQESDREIMAAQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRL 193 EH +++R +M A Q VPT ++A L T M A++ G+ T++ + Sbjct: 672 EHDDANRALMGANMQRQAVPT----LRADKPLVG------TGMERAVAVDSGV-TSVAKR 720 Query: 194 GGTASLPD 217 GGT D Sbjct: 721 GGTVQYVD 728
>CUTL1_CANFA (P39881) Homeobox protein cut-like 1 (CCAAT displacement protein)| (CDP) (Homeobox protein Clox) (Clox-1) (Fragment) Length = 975 Score = 28.5 bits (62), Expect = 8.2 Identities = 19/48 (39%), Positives = 21/48 (43%) Frame = +1 Query: 160 RARHPDGDPAPRRHRVVAGPDGRAVASATQGAVSQPRPAAAGQIRRPG 303 R+R P G P P GP R GA + P AA G RRPG Sbjct: 827 RSRRPRG-PGP-------GPGRRGGGGPAPGAPAAPAAAARGPSRRPG 866
>ACS2L_HUMAN (Q9NUB1) Acetyl-coenzyme A synthetase 2-like, mitochondrial| precursor (EC 6.2.1.1) (Acetate--CoA ligase 2) (Acetyl-CoA synthetase 2) (Acyl-CoA synthetase short-chain family member 1) Length = 689 Score = 28.5 bits (62), Expect = 8.2 Identities = 19/45 (42%), Positives = 21/45 (46%) Frame = +1 Query: 163 ARHPDGDPAPRRHRVVAGPDGRAVASATQGAVSQPRPAAAGQIRR 297 AR P G APR R +GP G A A A A PA + Q R Sbjct: 25 ARPPCGVSAPR--RAASGPSGSAPAVAAAAAQPGSYPALSAQAAR 67
>CO3A1_BOVIN (P04258) Collagen alpha-1(III) chain| Length = 1049 Score = 28.5 bits (62), Expect = 8.2 Identities = 26/79 (32%), Positives = 29/79 (36%), Gaps = 9/79 (11%) Frame = +1 Query: 127 LPHVHGTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASATQGAVSQPRPA-------AAG 285 LP G + AR DG P P GP G A + GA + PA A G Sbjct: 157 LPGAAGARGNDGARGSDGQPGP------PGPPGTAGFPGSPGAKGEVGPAGSPGSSGAPG 210 Query: 286 QIRRPGV--HRGRDLQPDP 336 Q PG H G P P Sbjct: 211 QRGEPGPQGHAGAPGPPGP 229
>VSI3_REOVJ (P30211) Sigma 3 protein (Major outer capsid protein)| Length = 365 Score = 28.5 bits (62), Expect = 8.2 Identities = 13/33 (39%), Positives = 21/33 (63%) Frame = +2 Query: 356 DGVLIDGEARQVAFPLAVTSRYHMESGLGLADW 454 +GV ++GEARQ F SR ++E G+ + D+ Sbjct: 193 NGVKLEGEARQTQFSRTFDSRSNLEWGVMIYDY 225
>TEGU_HHV11 (P10220) Large tegument protein (Virion protein UL36)| Length = 3164 Score = 24.3 bits (51), Expect(2) = 8.8 Identities = 17/57 (29%), Positives = 21/57 (36%) Frame = +1 Query: 136 VHGTQVRHRARHPDGDPAPRRHRVVAGPDGRAVASATQGAVSQPRPAAAGQIRRPGV 306 +HG + A G PAP P +Q A P PA + RPGV Sbjct: 2576 IHGLE--ELASDDSGGPAPLLAPDPLSPTADQSVPTSQCAPRPPGPAVTAREARPGV 2630 Score = 22.3 bits (46), Expect(2) = 8.8 Identities = 10/29 (34%), Positives = 16/29 (55%) Frame = +3 Query: 291 PTPWRAPRPGSTA*PRCPTSSWMAYSSTA 377 P+P +P P PR P SS + +S++ Sbjct: 2650 PSPQSSPAPPDATAPRPPASSRASAASSS 2678 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,529,884 Number of Sequences: 219361 Number of extensions: 1303891 Number of successful extensions: 6140 Number of sequences better than 10.0: 97 Number of HSP's better than 10.0 without gapping: 5207 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6099 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2793557952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)