>CBX2_MOUSE (P30658) Chromobox protein homolog 2 (Modifier 3 protein) (M33)|
          Length = 519

 Score = 36.6 bits (83), Expect = 0.030
 Identities = 21/53 (39%), Positives = 29/53 (54%)
 Frame = +3

Query: 171 QAEARRERKEGRPGTGTGAAGSRHRRSKMSDPSEPSKEGSSANGSSALQKTGA 329
           Q   R +R  GRP   T A  S  RRSK+ +P  PSK  SS++ SS+   + +
Sbjct: 68  QNRKRGKRPRGRPRKHT-ATSSCSRRSKLKEPDAPSKSKSSSSSSSSTSSSSS 119

>CBX2_HUMAN (Q14781) Chromobox protein homolog 2|
          Length = 532

 Score = 35.4 bits (80), Expect = 0.067
 Identities = 21/53 (39%), Positives = 29/53 (54%)
 Frame = +3

Query: 171 QAEARRERKEGRPGTGTGAAGSRHRRSKMSDPSEPSKEGSSANGSSALQKTGA 329
           Q   R +R  GRP   T A  S  RRSK+ +P  PSK  SS++ SS+   + +
Sbjct: 68  QNRKRGKRPRGRPRKLT-AMSSCSRRSKLKEPDAPSKSKSSSSSSSSTSSSSS 119

>NRL_HUMAN (P54845) Neural retina-specific leucine zipper protein (NRL)|
           (D14S46E)
          Length = 237

 Score = 32.0 bits (71), Expect = 0.74
 Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
 Frame = +3

Query: 177 EARRERKEGRPGTGTGAAGSRHRRSKMSDP--SEPSKEGSSANGSSALQKTGAWSSILST 350
           E +RE  EGRPG  T + GS    S    P  SEP   G++      L++   W   L+T
Sbjct: 22  EVKREPSEGRPGPPTASLGSTPYSSVPPSPTFSEPGMVGATEGTRPGLEEL-YW---LAT 77

Query: 351 LVQQASVYGLAVG 389
           L QQ    G A+G
Sbjct: 78  LQQQLGA-GEALG 89

>FSH_DROME (P13709) Homeotic protein female sterile (Fragile-chorion membrane|
            protein)
          Length = 2038

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +3

Query: 165  DDQAEARRERKEGRPGTGTGAAGSRHRRSKMSDPSEPSKEGSSANG 302
            D   +  RER+  R G+G G +G+ +  S  ++ + P   GS  +G
Sbjct: 1777 DRDRDRDRERERERSGSGGGQSGNGNNSSNSANSNGPGSAGSGGSG 1822

>RNPS1_XENLA (Q5XG24) RNA-binding protein with serine-rich domain 1|
          Length = 283

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = +3

Query: 186 RERKEGRPGTGTGAAGSRHRRSKMSDPSEPSKEGSSANG--SSALQKTGAWSSILSTLVQ 359
           R++ + R    +G++ S H RS  S  S       S++G  SSA  ++G+ SS  S+   
Sbjct: 36  RDKAKKRRSGSSGSSSSSHSRSSSSSSSSSGSSSGSSSGSSSSASSRSGSSSSSRSSSSS 95

Query: 360 QAS 368
            +S
Sbjct: 96  SSS 98

>HIRA_FUGRU (O42611) HIRA protein (TUP1-like enhancer of split protein 1)|
          Length = 1025

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 19/61 (31%), Positives = 29/61 (47%)
 Frame = +3

Query: 168 DQAEARRERKEGRPGTGTGAAGSRHRRSKMSDPSEPSKEGSSANGSSALQKTGAWSSILS 347
           D AE   +RK+GRP     AA      ++ + P+E     ++A G+ A   T A +  L 
Sbjct: 633 DGAEVVEKRKKGRPRKDKMAASIAQPLTQTTSPAEREPSRAAAAGAGAAAPTAAAALKLP 692

Query: 348 T 350
           T
Sbjct: 693 T 693

>Y875_CHLTR (O84883) Protein CT_875|
          Length = 591

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 21/47 (44%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
 Frame = -3

Query: 326 SSFLESTRTIG*RTFFRGLRGI-----RHLAAPVPGTRRACACAWSS 201
           SS +EST T G  T  R  RG+     R L       RRA  CAWSS
Sbjct: 61  SSMIESTPTSGETT--RASRGVFSRFQRGLVRVADKVRRAVQCAWSS 105

>GSPD2_DICD3 (Q01565) General secretion pathway protein D precursor (Pectic|
           enzymes secretion protein outD)
          Length = 710

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
 Frame = +3

Query: 216 GTGAAGSRHRRSK-MSDPSEPSKEGSSANGSSALQKTGAWSSILSTLVQQASV-YGLAVG 389
           G G +G+R+  S   S PS P + GSS+N +S+   +G+ S   S+    +S+ +G A G
Sbjct: 288 GNGTSGNRNSSSSNASRPSSP-RSGSSSNSNSSSGSSGSSSGSSSSSSSSSSMGFGSAFG 346

>DDX21_MOUSE (Q9JIK5) Nucleolar RNA helicase 2 (EC 3.6.1.-) (Nucleolar RNA|
           helicase II) (Nucleolar RNA helicase Gu) (RH II/Gu)
           (Gu-alpha) (DEAD box protein 21)
          Length = 851

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +3

Query: 186 RERKEGRPGTGTGAAGSRHRRSKMSDPSEPSKEGSSANGSSALQKT 323
           ++ K+G+  +G     S   +  +S PSEP    S A G  +  +T
Sbjct: 202 KKMKKGKEASGDAGEKSPRLKDGLSQPSEPKSNSSDAPGEESSSET 247

>PININ_CANFA (P79149) Pinin|
          Length = 773

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = +3

Query: 186 RERKEGRPGTGTGAAGSRHRRSKMSDPSEPSKE--GSSANGSSALQKTGAWSSILS 347
           R R  GR    T  + SR   S  S  S  S    GSS++GSS+ + + + SS  S
Sbjct: 615 RSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGGSSSSGSSSSRSSSSSSSSTS 670

>AB1IP_MOUSE (Q8R5A3) Amyloid beta A4 precursor protein-binding family B member|
           1-interacting protein (APBB1-interacting protein 1)
           (Proline-rich EVH1 ligand 1) (PREL-1) (Proline-rich
           protein 48)
          Length = 670

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = +3

Query: 171 QAEARRERKEGRPGTGTGAAGSRHR-RSKMSDPSEPSKEGSSANGSSAL 314
           Q E  ++ K+G      GA    HR +S +  P  P +  S   GS AL
Sbjct: 492 QIETTKDEKQGLGNHSPGATRENHRPKSSLPPPPPPVRRSSDTCGSPAL 540

>ECEL1_HUMAN (O95672) Endothelin-converting enzyme-like 1 (EC 3.4.24.-) (Xce|
           protein)
          Length = 775

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 15/46 (32%), Positives = 18/46 (39%)
 Frame = +3

Query: 114 RHGLPXXXXXXXXXXXXDDQAEARRERKEGRPGTGTGAAGSRHRRS 251
           RH +P             +Q E R  R   RPG G G A  R  R+
Sbjct: 137 RHAIPDDKLTYGTIAAIGEQNEERLRRLLARPGGGPGGAAQRKVRA 182

>U3IP2_HUMAN (O43818) U3 small nucleolar RNA-interacting protein 2 (U3 small|
           nucleolar ribonucleoproptein-associated 55-kDa protein)
           (U3 snoRNP-associated 55-kDa protein) (U3-55K)
          Length = 475

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
 Frame = +3

Query: 192 RKEGRPGTGTGA---AGSRHRRSKMSDPSEPSKEGSSAN 299
           RK G+P +G GA   AG R R++  +     SK G   N
Sbjct: 8   RKRGKPASGAGAGAGAGKRRRKADSAGDRGKSKGGGKMN 46

>LNT_CHLCV (Q824Q5) Apolipoprotein N-acyltransferase (EC 2.3.1.-) (ALP|
           N-acyltransferase)
          Length = 541

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 371 VWLGCWLLPVSIFALHYQQMGN 436
           VWLGC L P  +  +HY+ + N
Sbjct: 190 VWLGCLLFPYILGGVHYEYLKN 211

>GRIN1_HUMAN (Q7Z2K8) G protein-regulated inducer of neurite outgrowth 1 (GRIN1)|
          Length = 1008

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 8/65 (12%)
 Frame = +3

Query: 168 DQAEARRERKEGRPGTGTGAAGSRHRRSKMSDPS--------EPSKEGSSANGSSALQKT 323
           DQ+     R     G G GA+ S   R  ++ PS         PSKE   A+G+S    T
Sbjct: 62  DQSPGMESRHRSPSGAGEGASCSDGPRGSLACPSPTCFSPQESPSKETLEAHGASISGTT 121

Query: 324 GAWSS 338
            A +S
Sbjct: 122 EATTS 126

>BBR1_SCHCO (P78741) Pheromone B beta 1 receptor|
          Length = 541

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 383 CWLLPVSIFALHYQQMGN 436
           CWLLP+   ALHY   G+
Sbjct: 116 CWLLPIIFMALHYVVQGH 133


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,356,228
Number of Sequences: 219361
Number of extensions: 925266
Number of successful extensions: 3321
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3317
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)