ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart58d07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC134932.2| Oryza sativa (japonica cultivar-group) chromosome... 105 1e-19
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
3dbj|AK070832.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 1e-19
4dbj|AK066003.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 1e-19
5dbj|AK062621.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 1e-19
6ref|XM_475199.1| Oryza sativa (japonica cultivar-group), predic... 103 4e-19
7gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chr... 50 0.005
8ref|XM_572517.1| Cryptococcus neoformans var. neoformans JEC21 h... 50 0.005
9gb|AC010140.3|AC010140 Homo sapiens BAC clone RP11-218E11 from Y... 44 0.33
10gb|AY269976.1| Onychomys leucogaster dentin matrix protein 1 (DM... 42 1.3
11gb|AY269975.1| Onychomys arenicola dentin matrix protein 1 (DMP1... 42 1.3
12gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chr... 42 1.3
13gb|AF064857.1| Homo sapiens BAC derived from chromosome 21q22.3,... 42 1.3
14gb|AC115037.16| Mus musculus chromosome 12, clone RP24-276C17, c... 42 1.3
15ref|XM_566779.1| Cryptococcus neoformans var. neoformans JEC21 h... 42 1.3
16gb|AC117202.2| Mus musculus BAC clone RP23-248L5 from 14, comple... 42 1.3
17gb|AC117240.4| Mus musculus BAC clone RP24-140F3 from 12, comple... 42 1.3
18emb|AL163281.2|HS21C081 Homo sapiens chromosome 21 segment HS21C081 42 1.3
19emb|CR936240.10| Zebrafish DNA sequence from clone DKEY-233K19 i... 42 1.3
20emb|AL139038.18| Human DNA sequence from clone RP11-456B18 on ch... 42 1.3
21gb|AC080003.6| Homo sapiens BAC clone RP11-344F9 from 4, complet... 42 1.3
22gb|AC023134.5| Homo sapiens chromosome 5 clone RP11-463C5, compl... 42 1.3
23gb|AC016568.5| Homo sapiens chromosome 5 clone CTC-566C5, comple... 42 1.3
24gb|AC025439.5| Homo sapiens chromosome 5 clone CTC-480E9, comple... 42 1.3
25gb|AC154586.2| Mus musculus BAC clone RP23-362L12 from chromosom... 42 1.3
26gb|AC021842.7|AC021842 Homo sapiens chromosome 8, clone RP11-472... 42 1.3
27dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
28gb|AC016732.7| Homo sapiens BAC clone RP11-389E16 from 2, comple... 42 1.3
29gb|AY940097.1| Homo sapiens X-ray repair complementing defective... 42 1.3
30emb|AL954229.2|PTB103H04 Pan troglodytes chromosome 22 BAC PTB-1... 42 1.3
31gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.3
32emb|AL731876.3|CNS08C8G Oryza sativa chromosome 12, . BAC OJ1194... 42 1.3
33gb|DQ205538.1| Bos taurus prion protein (PRNP) and prion-like pr... 40 5.2
34ref|NM_122744.2| Arabidopsis thaliana unknown protein AT5G28610 ... 40 5.2
35ref|NM_113793.2| Arabidopsis thaliana unknown protein AT3G28720 ... 40 5.2
36gb|AC165299.13| Mus musculus chromosome 15, clone RP23-266F2, co... 40 5.2
37gb|AC092193.4| Bos taurus clone RP42-459A17, complete sequence 40 5.2
38gb|AC152889.1| Ornithorhynchus anatinus chromosome UNK clone OAB... 40 5.2
39gb|AC154387.2| Mus musculus BAC clone RP23-10K1 from chromosome ... 40 5.2
40ref|XM_469962.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.2
41ref|NM_001003321.1| Canis familiaris dolichyl-diphosphooligosacc... 40 5.2
42gb|AC118472.8| Mus musculus chromosome 19, clone RP23-187N14, co... 40 5.2
43ref|XM_369667.1| Magnaporthe grisea 70-15 chromosome III hypothe... 40 5.2
44gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 geno... 40 5.2
45gb|AY944236.1| Bos taurus prion preproprotein (PRNP) and prion-l... 40 5.2
46gb|AC118249.11| Mus musculus chromosome 19, clone RP23-397G23, c... 40 5.2
47gb|AC093483.6| Mus musculus chromosome 9, clone RP23-79K5, compl... 40 5.2
48gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.2
49gb|AC003992.2| Homo sapiens BAC clone CTA-250D13 from 7, complet... 40 5.2
50gb|AY330343.1| Odocoileus hemionus prion protein (prnp) gene, co... 40 5.2
51gb|AC116552.2| Homo sapiens chromosome 16 clone RP11-21B21, comp... 40 5.2
52gb|BT010797.1| Arabidopsis thaliana At5g28610 mRNA, complete cds 40 5.2
53gb|AC129195.3| Mus musculus BAC clone RP24-150H14 from chromosom... 40 5.2
54gb|AC146849.1| Pan troglodytes BAC clone RP43-163I11 from 7, com... 40 5.2
55gb|AC107662.9| Mus musculus chromosome 9, clone RP23-99B22, comp... 40 5.2
56gb|AY098743.2| Oryza sativa (japonica cultivar-group) globulin-l... 40 5.2
57emb|AL158040.14| Human DNA sequence from clone RP11-360G10 on ch... 40 5.2
58gb|AC024935.34| Homo sapiens 12 BAC RP11-471G7 (Roswell Park Can... 40 5.2
59emb|AL080250.11|HSJ234P15 Human DNA sequence from clone RP1-234P... 40 5.2
60gb|AC159539.6| Mus musculus chromosome 5, clone RP23-228F6, comp... 40 5.2
61emb|AL021367.1|HS443E24 Human DNA sequence from clone RP3-443E24... 40 5.2
62ref|NM_001005083.1| Xenopus tropicalis small nuclear ribonucleop... 40 5.2
63gb|BC077006.1| Xenopus tropicalis small nuclear ribonucleoprotei... 40 5.2
64gb|AC010051.9| Drosophila melanogaster 3L BAC RP98-3J2 (Roswell ... 40 5.2
65dbj|AP008932.1| Rhodococcus erythropolis PR4 plasmid pREC1, comp... 40 5.2
66gb|AE005954.1| Caulobacter crescentus CB15 section 280 of 359 of... 40 5.2
67gb|AC099687.5| Homo sapiens chromosome 11, clone CTD-2507G9, com... 40 5.2
68gb|AC010055.6| Drosophila melanogaster 3L BAC RP98-24H3 (Roswell... 40 5.2
69gb|AC021698.12| Homo sapiens chromosome 11, clone RP11-430L3, co... 40 5.2
70tpg|BK002256.1| TPA: TPA_inf: Drosophila melanogaster HDC11281 (... 40 5.2
71gb|AC108166.5| Homo sapiens BAC clone RP11-724L20 from 4, comple... 40 5.2
72gb|AC105225.5| Homo sapiens chromosome 8, clone RP11-775E18, com... 40 5.2
73gb|AC026467.6| Homo sapiens chromosome 16 clone RP11-410M9, comp... 40 5.2
74ref|XM_695280.1| PREDICTED: Danio rerio similar to meningioma ex... 40 5.2
75gb|AC154596.2| Mus musculus BAC clone RP23-354C17 from chromosom... 40 5.2
76gb|AF094611.1|AF094611 Mus musculus phospholipase A2-1b gene, co... 40 5.2
77dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
78dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
79dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
80gb|AC015599.5|AC015599 Homo sapiens chromosome , clone RP11-45B1... 40 5.2
81gb|AC135049.2| Homo sapiens chromosome 16 clone RP11-142N21, com... 40 5.2
82gb|AC105399.3| Homo sapiens BAC clone RP11-715P7 from 2, complet... 40 5.2
83gb|AC158541.1| Pan troglodytes BAC clone CH251-19F24 from chromo... 40 5.2
84gb|AF507977.1| Enterococcus faecium plasmid pRUM, complete sequence 40 5.2
85dbj|AP004326.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
86gb|AE004552.1| Pseudomonas aeruginosa PAO1, section 113 of 529 o... 40 5.2
87gb|AF262040.1|T10I18 Arabidopsis thaliana BAC T10I18 40 5.2
88dbj|AP002057.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 5.2
89gb|AC117735.8| Mus musculus chromosome 5, clone RP24-132L16, com... 40 5.2
90dbj|AK122385.1| Mus musculus mRNA for mKIAA0839 protein 40 5.2
91dbj|AK121667.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.2
92dbj|AP004617.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
93dbj|AP005268.1| Pan troglodytes DNA, chromosome 7 clone:PTB-029M... 40 5.2
94emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 5.2
95tpe|BN000291.1|BTA000291 TPA: TPA_exp: Bos taurus prp gene for p... 40 5.2
96emb|CR942765.2| Xenopus tropicalis finished cDNA, clone TNeu139h07 40 5.2
97emb|AL096870.5|CNS00YVI Human chromosome 14 DNA sequence BAC R-9... 40 5.2
98gb|AE003593.2| Drosophila melanogaster chromosome 3L, section 74... 40 5.2
99emb|AL158801.4|CNS01RGN Human chromosome 14 DNA sequence BAC R-6... 40 5.2
100emb|AL139316.5|CNS01DXH Human chromosome 14 DNA sequence BAC R-6... 40 5.2
101gb|AF061871.1|AF061871 Homo sapiens collagen type XII alpha 1 (C... 40 5.2
102emb|AJ298878.1|BTA298878 Bos taurus prp gene for prion protein 40 5.2
103gb|AC132286.3| Mus musculus BAC clone RP24-299C19 from 1, comple... 40 5.2
104gb|AC154362.1| Mus musculus BAC clone RP23-154E1 from 14, comple... 40 5.2
105gb|AC124527.5| Mus musculus BAC clone RP23-411B11 from 1, comple... 40 5.2
106dbj|AP005136.2| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 5.2
107gb|AC165368.5| Mus musculus BAC clone RP23-28L24 from chromosome... 40 5.2
108emb|AL954801.1| Mouse DNA sequence from clone RP23-171K6 on chro... 40 5.2
109gb|M98392.1|DOGOST48A Canis familiaris oligosaccharyltransferase... 40 5.2 
>gb|AC134932.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0092G21,
              complete sequence
          Length = 151267

 Score =  105 bits (53), Expect = 1e-19
 Identities = 105/121 (86%), Gaps = 6/121 (4%)
 Strand = Plus / Minus

                                                                          
Query: 137    gatggaggtggagatgcagctggacgacgacgtcttcttcgcggagctcagcaagcggat 196
              ||||||||||||||||    |||| |||||||| |||||||| |||||||||||||||||
Sbjct: 108981 gatggaggtggagatga---tggaggacgacgtgttcttcgccgagctcagcaagcggat 108925

                                                                          
Query: 197    ttcgctcctcatcaccgacgacgacga---ggccgacttcggctccgcgcagttccccgc 253
               |||||||||||||| |||||||||||   ||||||||||||| |||| |  ||||||||
Sbjct: 108924 atcgctcctcatcacggacgacgacgaggcggccgacttcggcgccgcacgcttccccgc 108865

               
Query: 254    c 254
              |
Sbjct: 108864 c 108864



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 49/52 (94%)
 Strand = Plus / Minus

                                                                  
Query: 307    cgtcgatgttggcgccaccggcctacacgttgttccaccacgccgccngcta 358
              |||||||| |||||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 105899 cgtcgatggtggcgccaccggcctacacgttgtaccaccacgccgccagcta 105848
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  105 bits (53), Expect = 1e-19
 Identities = 105/121 (86%), Gaps = 6/121 (4%)
 Strand = Plus / Minus

                                                                            
Query: 137      gatggaggtggagatgcagctggacgacgacgtcttcttcgcggagctcagcaagcggat 196
                ||||||||||||||||    |||| |||||||| |||||||| |||||||||||||||||
Sbjct: 19187083 gatggaggtggagatga---tggaggacgacgtgttcttcgccgagctcagcaagcggat 19187027

                                                                            
Query: 197      ttcgctcctcatcaccgacgacgacga---ggccgacttcggctccgcgcagttccccgc 253
                 |||||||||||||| |||||||||||   ||||||||||||| |||| |  ||||||||
Sbjct: 19187026 atcgctcctcatcacggacgacgacgaggcggccgacttcggcgccgcacgcttccccgc 19186967

                 
Query: 254      c 254
                |
Sbjct: 19186966 c 19186966



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 49/52 (94%)
 Strand = Plus / Minus

                                                                    
Query: 307      cgtcgatgttggcgccaccggcctacacgttgttccaccacgccgccngcta 358
                |||||||| |||||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 19184001 cgtcgatggtggcgccaccggcctacacgttgtaccaccacgccgccagcta 19183950
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>dbj|AK070832.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023066C05, full
           insert sequence
          Length = 1104

 Score =  105 bits (53), Expect = 1e-19
 Identities = 105/121 (86%), Gaps = 6/121 (4%)
 Strand = Plus / Plus

                                                                       
Query: 137 gatggaggtggagatgcagctggacgacgacgtcttcttcgcggagctcagcaagcggat 196
           ||||||||||||||||    |||| |||||||| |||||||| |||||||||||||||||
Sbjct: 158 gatggaggtggagatga---tggaggacgacgtgttcttcgccgagctcagcaagcggat 214

                                                                       
Query: 197 ttcgctcctcatcaccgacgacgacga---ggccgacttcggctccgcgcagttccccgc 253
            |||||||||||||| |||||||||||   ||||||||||||| |||| |  ||||||||
Sbjct: 215 atcgctcctcatcacggacgacgacgaggcggccgacttcggcgccgcacgcttccccgc 274

            
Query: 254 c 254
           |
Sbjct: 275 c 275



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 49/52 (94%)
 Strand = Plus / Plus

                                                               
Query: 307 cgtcgatgttggcgccaccggcctacacgttgttccaccacgccgccngcta 358
           |||||||| |||||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 328 cgtcgatggtggcgccaccggcctacacgttgtaccaccacgccgccagcta 379
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>dbj|AK066003.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043E21, full
           insert sequence
          Length = 2279

 Score =  105 bits (53), Expect = 1e-19
 Identities = 105/121 (86%), Gaps = 6/121 (4%)
 Strand = Plus / Plus

                                                                       
Query: 137 gatggaggtggagatgcagctggacgacgacgtcttcttcgcggagctcagcaagcggat 196
           ||||||||||||||||    |||| |||||||| |||||||| |||||||||||||||||
Sbjct: 158 gatggaggtggagatga---tggaggacgacgtgttcttcgccgagctcagcaagcggat 214

                                                                       
Query: 197 ttcgctcctcatcaccgacgacgacga---ggccgacttcggctccgcgcagttccccgc 253
            |||||||||||||| |||||||||||   ||||||||||||| |||| |  ||||||||
Sbjct: 215 atcgctcctcatcacggacgacgacgaggcggccgacttcggcgccgcacgcttccccgc 274

            
Query: 254 c 254
           |
Sbjct: 275 c 275
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>dbj|AK062621.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-B09, full
           insert sequence
          Length = 603

 Score =  105 bits (53), Expect = 1e-19
 Identities = 105/121 (86%), Gaps = 6/121 (4%)
 Strand = Plus / Plus

                                                                       
Query: 137 gatggaggtggagatgcagctggacgacgacgtcttcttcgcggagctcagcaagcggat 196
           ||||||||||||||||    |||| |||||||| |||||||| |||||||||||||||||
Sbjct: 157 gatggaggtggagatga---tggaggacgacgtgttcttcgccgagctcagcaagcggat 213

                                                                       
Query: 197 ttcgctcctcatcaccgacgacgacga---ggccgacttcggctccgcgcagttccccgc 253
            |||||||||||||| |||||||||||   ||||||||||||| |||| |  ||||||||
Sbjct: 214 atcgctcctcatcacggacgacgacgaggcggccgacttcggcgccgcacgcttccccgc 273

            
Query: 254 c 254
           |
Sbjct: 274 c 274



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 49/52 (94%)
 Strand = Plus / Plus

                                                               
Query: 307 cgtcgatgttggcgccaccggcctacacgttgttccaccacgccgccngcta 358
           |||||||| |||||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 327 cgtcgatggtggcgccaccggcctacacgttgtaccaccacgccgccagcta 378
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>ref|XM_475199.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 444

 Score =  103 bits (52), Expect = 4e-19
 Identities = 104/120 (86%), Gaps = 6/120 (5%)
 Strand = Plus / Plus

                                                                       
Query: 138 atggaggtggagatgcagctggacgacgacgtcttcttcgcggagctcagcaagcggatt 197
           |||||||||||||||    |||| |||||||| |||||||| ||||||||||||||||| 
Sbjct: 1   atggaggtggagatga---tggaggacgacgtgttcttcgccgagctcagcaagcggata 57

                                                                       
Query: 198 tcgctcctcatcaccgacgacgacga---ggccgacttcggctccgcgcagttccccgcc 254
           |||||||||||||| |||||||||||   ||||||||||||| |||| |  |||||||||
Sbjct: 58  tcgctcctcatcacggacgacgacgaggcggccgacttcggcgccgcacgcttccccgcc 117



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 49/52 (94%)
 Strand = Plus / Plus

                                                               
Query: 307 cgtcgatgttggcgccaccggcctacacgttgttccaccacgccgccngcta 358
           |||||||| |||||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 170 cgtcgatggtggcgccaccggcctacacgttgtaccaccacgccgccagcta 221
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>gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 8, complete
             sequence
          Length = 1194300

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 124   agaggaggaggaagatggaggtggagatg 152
             |||||||||||||||||||||||| ||||
Sbjct: 93653 agaggaggaggaagatggaggtggggatg 93625
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>ref|XM_572517.1| Cryptococcus neoformans var. neoformans JEC21 histone deacetylase 1
           (hd1) (CNH03520) partial mRNA
          Length = 2099

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 124 agaggaggaggaagatggaggtggagatg 152
           |||||||||||||||||||||||| ||||
Sbjct: 195 agaggaggaggaagatggaggtggggatg 167
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>gb|AC010140.3|AC010140 Homo sapiens BAC clone RP11-218E11 from Y, complete sequence
          Length = 148342

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 261   cacctcccaccgggtttctcca 282
             ||||||||||||||||||||||
Sbjct: 25648 cacctcccaccgggtttctcca 25627
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>gb|AY269976.1| Onychomys leucogaster dentin matrix protein 1 (DMP1) gene, exon 6
           and partial cds
          Length = 1107

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 30  tttccctgctactgctgtctg 50
           |||||||||||||||||||||
Sbjct: 496 tttccctgctactgctgtctg 476
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>gb|AY269975.1| Onychomys arenicola dentin matrix protein 1 (DMP1) gene, exon 6 and
           partial cds
          Length = 1095

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 30  tttccctgctactgctgtctg 50
           |||||||||||||||||||||
Sbjct: 502 tttccctgctactgctgtctg 482
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>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete
               sequence
          Length = 2300533

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 50      gctgctccgtccgtccttgcc 70
               |||||||||||||||||||||
Sbjct: 1124238 gctgctccgtccgtccttgcc 1124218
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>gb|AF064857.1| Homo sapiens BAC derived from chromosome 21q22.3, complete sequence,
              containing PEP19 (PCP4) gene
          Length = 199665

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 260    ccacctcccaccgggtttctccatg 284
              ||||||||||||||||| |||||||
Sbjct: 182730 ccacctcccaccgggttcctccatg 182754
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>gb|AC115037.16| Mus musculus chromosome 12, clone RP24-276C17, complete sequence
          Length = 214848

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 34/37 (91%), Gaps = 1/37 (2%)
 Strand = Plus / Plus

                                                   
Query: 125    gaggaggaggaagatggaggtggagatgcagctggac 161
              |||||||||||||| ||||| ||||| ||||||||||
Sbjct: 191973 gaggaggaggaaga-ggaggaggagaagcagctggac 192008
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>ref|XM_566779.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical
          protein (CNA04170) partial mRNA
          Length = 1092

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 50 gctgctccgtccgtccttgcc 70
          |||||||||||||||||||||
Sbjct: 76 gctgctccgtccgtccttgcc 96
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>gb|AC117202.2| Mus musculus BAC clone RP23-248L5 from 14, complete sequence
          Length = 209508

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 125   gaggaggaggaagatggaggtggag 149
             ||||||||||||||||| |||||||
Sbjct: 96989 gaggaggaggaagatggtggtggag 96965
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>gb|AC117240.4| Mus musculus BAC clone RP24-140F3 from 12, complete sequence
          Length = 171990

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 34/37 (91%), Gaps = 1/37 (2%)
 Strand = Plus / Minus

                                                   
Query: 125    gaggaggaggaagatggaggtggagatgcagctggac 161
              |||||||||||||| ||||| ||||| ||||||||||
Sbjct: 119261 gaggaggaggaaga-ggaggaggagaagcagctggac 119226
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>emb|AL163281.2|HS21C081 Homo sapiens chromosome 21 segment HS21C081
          Length = 340000

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 260    ccacctcccaccgggtttctccatg 284
              ||||||||||||||||| |||||||
Sbjct: 130431 ccacctcccaccgggttcctccatg 130455
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>emb|CR936240.10| Zebrafish DNA sequence from clone DKEY-233K19 in linkage group 16,
             complete sequence
          Length = 169758

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 26    ctgttttccctgctactgctgtctg 50
             |||||||||||||| ||||||||||
Sbjct: 53830 ctgttttccctgctgctgctgtctg 53854
to top
>emb|AL139038.18| Human DNA sequence from clone RP11-456B18 on chromosome 13, complete
             sequence
          Length = 140756

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 261   cacctcccaccgggtttctcc 281
             |||||||||||||||||||||
Sbjct: 15076 cacctcccaccgggtttctcc 15096
to top
>gb|AC080003.6| Homo sapiens BAC clone RP11-344F9 from 4, complete sequence
          Length = 187936

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 261   cacctcccaccgggtttctcc 281
             |||||||||||||||||||||
Sbjct: 99921 cacctcccaccgggtttctcc 99901
to top
>gb|AC023134.5| Homo sapiens chromosome 5 clone RP11-463C5, complete sequence
          Length = 172805

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 201    ctcctcatcaccgacgacgacgagg 225
              |||||||||||||| ||||||||||
Sbjct: 104700 ctcctcatcaccgatgacgacgagg 104676
to top
>gb|AC016568.5| Homo sapiens chromosome 5 clone CTC-566C5, complete sequence
          Length = 220932

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 201    ctcctcatcaccgacgacgacgagg 225
              |||||||||||||| ||||||||||
Sbjct: 141981 ctcctcatcaccgatgacgacgagg 142005
to top
>gb|AC025439.5| Homo sapiens chromosome 5 clone CTC-480E9, complete sequence
          Length = 125278

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 201   ctcctcatcaccgacgacgacgagg 225
             |||||||||||||| ||||||||||
Sbjct: 95584 ctcctcatcaccgatgacgacgagg 95560
to top
>gb|AC154586.2| Mus musculus BAC clone RP23-362L12 from chromosome 16, complete
             sequence
          Length = 224155

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 124   agaggaggaggaagatggagg 144
             |||||||||||||||||||||
Sbjct: 72517 agaggaggaggaagatggagg 72497
to top
>gb|AC021842.7|AC021842 Homo sapiens chromosome 8, clone RP11-472N16, complete sequence
          Length = 190044

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 261    cacctcccaccgggtttctcc 281
              |||||||||||||||||||||
Sbjct: 104343 cacctcccaccgggtttctcc 104363
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 203      cctcatcaccgacgacgacga 223
                |||||||||||||||||||||
Sbjct: 10777407 cctcatcaccgacgacgacga 10777387
to top
>gb|AC016732.7| Homo sapiens BAC clone RP11-389E16 from 2, complete sequence
          Length = 176741

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 21    tccctctgttttccctgctac 41
             |||||||||||||||||||||
Sbjct: 58316 tccctctgttttccctgctac 58336
to top
>gb|AY940097.1| Homo sapiens X-ray repair complementing defective repair in Chinese
              hamster cells 4 (XRCC4) gene, complete cds
          Length = 279061

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 201    ctcctcatcaccgacgacgacgagg 225
              |||||||||||||| ||||||||||
Sbjct: 267147 ctcctcatcaccgatgacgacgagg 267123
to top
>emb|AL954229.2|PTB103H04 Pan troglodytes chromosome 22 BAC PTB-103H04, complete sequence
          Length = 187866

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 260   ccacctcccaccgggtttctccatg 284
             ||||||||||||||||| |||||||
Sbjct: 49003 ccacctcccaccgggttcctccatg 49027
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 203      cctcatcaccgacgacgacga 223
                |||||||||||||||||||||
Sbjct: 10777106 cctcatcaccgacgacgacga 10777086
to top
>emb|AL731876.3|CNS08C8G Oryza sativa chromosome 12, . BAC OJ1194_E11 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 119388

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 203   cctcatcaccgacgacgacga 223
             |||||||||||||||||||||
Sbjct: 43756 cctcatcaccgacgacgacga 43736
to top
>gb|DQ205538.1| Bos taurus prion protein (PRNP) and prion-like protein doppel (PRND)
             genes, complete cds; PRNT (PRNT) gene, exons 1 and 2; and
             putative protein gene, complete cds
          Length = 104027

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 32    tccctgctactgctgtctgctgct 55
             |||||||||||||| |||||||||
Sbjct: 42272 tccctgctactgctctctgctgct 42295
to top
>ref|NM_122744.2| Arabidopsis thaliana unknown protein AT5G28610 mRNA, complete cds
          Length = 389

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 125 gaggaggaggaagatggaggtggagatg 152
           ||||||||||||||||  ||||||||||
Sbjct: 300 gaggaggaggaagatgatggtggagatg 327
to top
>ref|NM_113793.2| Arabidopsis thaliana unknown protein AT3G28720 mRNA, complete cds
          Length = 2172

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 125 gaggaggaggaagatggagg 144
           ||||||||||||||||||||
Sbjct: 63  gaggaggaggaagatggagg 44
to top
>gb|AC165299.13| Mus musculus chromosome 15, clone RP23-266F2, complete sequence
          Length = 186266

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 125   gaggaggaggaagatggaggtggagatg 152
             |||||||||||||| ||||| |||||||
Sbjct: 57702 gaggaggaggaagaaggaggaggagatg 57675
to top
>gb|AC092193.4| Bos taurus clone RP42-459A17, complete sequence
          Length = 258544

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 128  gaggaggaagatggaggtgg 147
            ||||||||||||||||||||
Sbjct: 7532 gaggaggaagatggaggtgg 7551
to top
>gb|AC152889.1| Ornithorhynchus anatinus chromosome UNK clone OABb-513A1, complete
             sequence
          Length = 115833

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    cctgctactgctgtctgctg 53
             ||||||||||||||||||||
Sbjct: 72356 cctgctactgctgtctgctg 72337
to top
>gb|AC154387.2| Mus musculus BAC clone RP23-10K1 from chromosome 16, complete sequence
          Length = 212628

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 125   gaggaggaggaagatggagg 144
             ||||||||||||||||||||
Sbjct: 55953 gaggaggaggaagatggagg 55972
to top
>ref|XM_469962.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1796

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 157 tggacgacgacgtcttcttc 176
           ||||||||||||||||||||
Sbjct: 62  tggacgacgacgtcttcttc 43
to top
>ref|NM_001003321.1| Canis familiaris dolichyl-diphosphooligosaccharide-protein
           glycosyltransferase (DDOST), mRNA
          Length = 1597

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 125 gaggaggaggaagatggagg 144
           ||||||||||||||||||||
Sbjct: 9   gaggaggaggaagatggagg 28
to top
>gb|AC118472.8| Mus musculus chromosome 19, clone RP23-187N14, complete sequence
          Length = 222869

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 125    gaggaggaggaagatggagg 144
              ||||||||||||||||||||
Sbjct: 213443 gaggaggaggaagatggagg 213462
to top
>ref|XM_369667.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein
            (MG05797.4) partial mRNA
          Length = 1626

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 335  gttgttccaccacgccgccngct 357
            ||||||||||||||||||| |||
Sbjct: 1101 gttgttccaccacgccgccagct 1079
to top
>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete
             sequence
          Length = 162497

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 157   tggacgacgacgtcttcttc 176
             ||||||||||||||||||||
Sbjct: 27735 tggacgacgacgtcttcttc 27754
to top
>gb|AY944236.1| Bos taurus prion preproprotein (PRNP) and prion-like protein doppel
             preproprotein (PRND) genes, complete cds; and RASSF2 gene,
             complete sequence
          Length = 207929

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 32    tccctgctactgctgtctgctgct 55
             |||||||||||||| |||||||||
Sbjct: 54537 tccctgctactgctctctgctgct 54560
to top
>gb|AC118249.11| Mus musculus chromosome 19, clone RP23-397G23, complete sequence
          Length = 224129

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 125  gaggaggaggaagatggagg 144
            ||||||||||||||||||||
Sbjct: 6297 gaggaggaggaagatggagg 6316
to top
>gb|AC093483.6| Mus musculus chromosome 9, clone RP23-79K5, complete sequence
          Length = 262048

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 21     tccctctgttttccctgcta 40
              ||||||||||||||||||||
Sbjct: 139832 tccctctgttttccctgcta 139813
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 157      tggacgacgacgtcttcttc 176
                ||||||||||||||||||||
Sbjct: 32716172 tggacgacgacgtcttcttc 32716153
to top
>gb|AC003992.2| Homo sapiens BAC clone CTA-250D13 from 7, complete sequence
          Length = 176109

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 262   acctcccaccgggtttctcc 281
             ||||||||||||||||||||
Sbjct: 67538 acctcccaccgggtttctcc 67557
to top
>gb|AY330343.1| Odocoileus hemionus prion protein (prnp) gene, complete cds
          Length = 65476

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 32    tccctgctactgctgtctgctgct 55
             |||||||||||||| |||||||||
Sbjct: 17343 tccctgctactgctctctgctgct 17366
to top
>gb|AC116552.2| Homo sapiens chromosome 16 clone RP11-21B21, complete sequence
          Length = 176797

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 133    ggaagatggaggtggagatg 152
              ||||||||||||||||||||
Sbjct: 152723 ggaagatggaggtggagatg 152742
to top
>gb|BT010797.1| Arabidopsis thaliana At5g28610 mRNA, complete cds
          Length = 473

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 125 gaggaggaggaagatggaggtggagatg 152
           ||||||||||||||||  ||||||||||
Sbjct: 285 gaggaggaggaagatgatggtggagatg 312
to top
>gb|AC129195.3| Mus musculus BAC clone RP24-150H14 from chromosome 1, complete sequence
          Length = 152726

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 125    gaggaggaggaagatggagg 144
              ||||||||||||||||||||
Sbjct: 100954 gaggaggaggaagatggagg 100973
to top
>gb|AC146849.1| Pan troglodytes BAC clone RP43-163I11 from 7, complete sequence
          Length = 147837

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 262   acctcccaccgggtttctcc 281
             ||||||||||||||||||||
Sbjct: 43891 acctcccaccgggtttctcc 43910
to top
>gb|AC107662.9| Mus musculus chromosome 9, clone RP23-99B22, complete sequence
          Length = 233476

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 21     tccctctgttttccctgcta 40
              ||||||||||||||||||||
Sbjct: 226325 tccctctgttttccctgcta 226306
to top
>gb|AY098743.2| Oryza sativa (japonica cultivar-group) globulin-like protein mRNA,
           complete cds
          Length = 1779

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 157 tggacgacgacgtcttcttc 176
           ||||||||||||||||||||
Sbjct: 28  tggacgacgacgtcttcttc 9
to top
>emb|AL158040.14| Human DNA sequence from clone RP11-360G10 on chromosome 10 Contains the
             5' end of the gene for KIAA0940 protein, a succinate
             dehydrogenase complex pseudogene, the 5' end of a novel
             gene (FLJ20445), a nucleolar protein family A member 2
             pseudogene 1 (NOLA2P1) and a CpG island, complete sequence
          Length = 213648

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 262   acctcccaccgggtttctcc 281
             ||||||||||||||||||||
Sbjct: 86475 acctcccaccgggtttctcc 86456
to top
>gb|AC024935.34| Homo sapiens 12 BAC RP11-471G7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 102102

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 137   gatggaggtggagatgcagctgga 160
             ||||||| ||||||||||||||||
Sbjct: 10274 gatggagctggagatgcagctgga 10297
to top
>emb|AL080250.11|HSJ234P15 Human DNA sequence from clone RP1-234P15 on chromosome 6q13-14.3
             contains the 5' end of the COL12A1 gene for collagen type
             XII alpha 1, the COX7A2 gene for  cytochrome c oxidase
             subunit VIIa polypeptide 2 (liver), two novel genes and
             three  CpG islands, complete sequence
          Length = 125641

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 124   agaggaggaggaagatggaggtgg 147
             ||||| ||||||||||||||||||
Sbjct: 25145 agagggggaggaagatggaggtgg 25122
to top
>gb|AC159539.6| Mus musculus chromosome 5, clone RP23-228F6, complete sequence
          Length = 238599

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   gaggaggaggaagatggagg 144
             ||||||||||||||||||||
Sbjct: 33931 gaggaggaggaagatggagg 33912
to top
>emb|AL021367.1|HS443E24 Human DNA sequence from clone RP3-443E24 on chromosome 6q16 Contains
             the 3' end of a novel gene, complete sequence
          Length = 139350

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 135   aagatggaggtggagatgca 154
             ||||||||||||||||||||
Sbjct: 93700 aagatggaggtggagatgca 93681
to top
>ref|NM_001005083.1| Xenopus tropicalis small nuclear ribonucleoprotein polypeptide F
           (MGC89662), mRNA
          Length = 576

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 124 agaggaggaggaagatggag 143
           ||||||||||||||||||||
Sbjct: 360 agaggaggaggaagatggag 379
to top
>gb|BC077006.1| Xenopus tropicalis small nuclear ribonucleoprotein polypeptide F,
           mRNA (cDNA clone MGC:89662 IMAGE:7026112), complete cds
          Length = 576

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 124 agaggaggaggaagatggag 143
           ||||||||||||||||||||
Sbjct: 360 agaggaggaggaagatggag 379
to top
>gb|AC010051.9| Drosophila melanogaster 3L BAC RP98-3J2 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 184424

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 136   agatggaggtggagatgcag 155
             ||||||||||||||||||||
Sbjct: 10956 agatggaggtggagatgcag 10975
to top
>dbj|AP008932.1| Rhodococcus erythropolis PR4 plasmid pREC1, complete sequence
          Length = 104014

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   aggtcggcacgcgacagctc 121
             ||||||||||||||||||||
Sbjct: 79002 aggtcggcacgcgacagctc 79021
to top
>gb|AE005954.1| Caulobacter crescentus CB15 section 280 of 359 of the complete genome
          Length = 10098

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 245  gttccccgccgccgtccacc 264
            ||||||||||||||||||||
Sbjct: 9346 gttccccgccgccgtccacc 9365
to top
>gb|AC099687.5| Homo sapiens chromosome 11, clone CTD-2507G9, complete sequence
          Length = 167577

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 262    acctcccaccgggtttctcc 281
              ||||||||||||||||||||
Sbjct: 143174 acctcccaccgggtttctcc 143155
to top
>gb|AC010055.6| Drosophila melanogaster 3L BAC RP98-24H3 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 163098

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 136    agatggaggtggagatgcag 155
              ||||||||||||||||||||
Sbjct: 147652 agatggaggtggagatgcag 147671
to top
>gb|AC021698.12| Homo sapiens chromosome 11, clone RP11-430L3, complete sequence
          Length = 201673

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 262    acctcccaccgggtttctcc 281
              ||||||||||||||||||||
Sbjct: 183839 acctcccaccgggtttctcc 183858
to top
>tpg|BK002256.1| TPA: TPA_inf: Drosophila melanogaster HDC11281 (HDC11281) gene,
            complete cds
          Length = 2042

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 136  agatggaggtggagatgcag 155
            ||||||||||||||||||||
Sbjct: 2013 agatggaggtggagatgcag 1994
to top
>gb|AC108166.5| Homo sapiens BAC clone RP11-724L20 from 4, complete sequence
          Length = 89882

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 262   acctcccaccgggtttctcc 281
             ||||||||||||||||||||
Sbjct: 32058 acctcccaccgggtttctcc 32039
to top
>gb|AC105225.5| Homo sapiens chromosome 8, clone RP11-775E18, complete sequence
          Length = 135609

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 124    agaggaggaggaagatggag 143
              ||||||||||||||||||||
Sbjct: 128074 agaggaggaggaagatggag 128055
to top
>gb|AC026467.6| Homo sapiens chromosome 16 clone RP11-410M9, complete sequence
          Length = 148054

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 133   ggaagatggaggtggagatg 152
             ||||||||||||||||||||
Sbjct: 27163 ggaagatggaggtggagatg 27182
to top
>ref|XM_695280.1| PREDICTED: Danio rerio similar to meningioma expressed antigen 5
           (hyaluronidase) (LOC571671), mRNA
          Length = 6293

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 124 agaggaggaggaagatggag 143
           ||||||||||||||||||||
Sbjct: 330 agaggaggaggaagatggag 349
to top
>gb|AC154596.2| Mus musculus BAC clone RP23-354C17 from chromosome 17, complete
             sequence
          Length = 208266

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 124   agaggaggaggaagatggaggtgg 147
             ||||||||||||||| ||||||||
Sbjct: 67786 agaggaggaggaagagggaggtgg 67763
to top
>gb|AF094611.1|AF094611 Mus musculus phospholipase A2-1b gene, complete cds
          Length = 10234

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 125  gaggaggaggaagatggagg 144
            ||||||||||||||||||||
Sbjct: 4911 gaggaggaggaagatggagg 4892
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 124      agaggaggaggaagatggag 143
                ||||||||||||||||||||
Sbjct: 20760779 agaggaggaggaagatggag 20760760
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 157      tggacgacgacgtcttcttc 176
                ||||||||||||||||||||
Sbjct: 32806682 tggacgacgacgtcttcttc 32806663
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 202      tcctcatcaccgacgacgacgagg 225
                ||||| ||||||||||||||||||
Sbjct: 42192088 tcctcctcaccgacgacgacgagg 42192111
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>gb|AC015599.5|AC015599 Homo sapiens chromosome , clone RP11-45B19, complete sequence
          Length = 162607

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 124    agaggaggaggaagatggag 143
              ||||||||||||||||||||
Sbjct: 107983 agaggaggaggaagatggag 107964
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>gb|AC135049.2| Homo sapiens chromosome 16 clone RP11-142N21, complete sequence
          Length = 115368

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 133  ggaagatggaggtggagatg 152
            ||||||||||||||||||||
Sbjct: 3739 ggaagatggaggtggagatg 3758
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>gb|AC105399.3| Homo sapiens BAC clone RP11-715P7 from 2, complete sequence
          Length = 172435

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 262   acctcccaccgggtttctcc 281
             ||||||||||||||||||||
Sbjct: 72197 acctcccaccgggtttctcc 72216
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>gb|AC158541.1| Pan troglodytes BAC clone CH251-19F24 from chromosome unknown, complete
              sequence
          Length = 186577

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 262    acctcccaccgggtttctcc 281
              ||||||||||||||||||||
Sbjct: 152229 acctcccaccgggtttctcc 152210
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>gb|AF507977.1| Enterococcus faecium plasmid pRUM, complete sequence
          Length = 24873

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 329  ctacacgttgttccaccacg 348
            ||||||||||||||||||||
Sbjct: 2028 ctacacgttgttccaccacg 2009
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>dbj|AP004326.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1294_F06
          Length = 121088

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 202   tcctcatcaccgacgacgacgagg 225
             ||||| ||||||||||||||||||
Sbjct: 65286 tcctcctcaccgacgacgacgagg 65309
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>gb|AE004552.1| Pseudomonas aeruginosa PAO1, section 113 of 529 of the complete
            genome
          Length = 11158

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 81   ccgctccagctccggcgagc 100
            ||||||||||||||||||||
Sbjct: 4514 ccgctccagctccggcgagc 4495
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>gb|AF262040.1|T10I18 Arabidopsis thaliana BAC T10I18
          Length = 66542

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 125   gaggaggaggaagatggaggtggagatg 152
             ||||||||||||||||  ||||||||||
Sbjct: 61007 gaggaggaggaagatgatggtggagatg 61034
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>dbj|AP002057.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone: T19N8
          Length = 73391

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 125  gaggaggaggaagatggagg 144
            ||||||||||||||||||||
Sbjct: 2015 gaggaggaggaagatggagg 1996
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>gb|AC117735.8| Mus musculus chromosome 5, clone RP24-132L16, complete sequence
          Length = 183861

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 125   gaggaggaggaagatggagg 144
             ||||||||||||||||||||
Sbjct: 10026 gaggaggaggaagatggagg 10045
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>dbj|AK122385.1| Mus musculus mRNA for mKIAA0839 protein
          Length = 5037

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 125  gaggaggaggaagatggagg 144
            ||||||||||||||||||||
Sbjct: 3845 gaggaggaggaagatggagg 3826
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>dbj|AK121667.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033066K06, full
           insert sequence
          Length = 1702

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 157 tggacgacgacgtcttcttc 176
           ||||||||||||||||||||
Sbjct: 63  tggacgacgacgtcttcttc 44
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>dbj|AP004617.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0479C08
          Length = 152460

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 124    agaggaggaggaagatggag 143
              ||||||||||||||||||||
Sbjct: 133232 agaggaggaggaagatggag 133213
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>dbj|AP005268.1| Pan troglodytes DNA, chromosome 7 clone:PTB-029M21, complete sequence
          Length = 154715

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 262   acctcccaccgggtttctcc 281
             ||||||||||||||||||||
Sbjct: 65040 acctcccaccgggtttctcc 65021
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 252    gccgccgtccacctcccacc 271
              ||||||||||||||||||||
Sbjct: 172164 gccgccgtccacctcccacc 172183
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>tpe|BN000291.1|BTA000291 TPA: TPA_exp: Bos taurus prp gene for prion protein
          Length = 78056

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 32    tccctgctactgctgtctgctgct 55
             |||||||||||||| |||||||||
Sbjct: 42274 tccctgctactgctctctgctgct 42297
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>emb|CR942765.2| Xenopus tropicalis finished cDNA, clone TNeu139h07
          Length = 567

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 124 agaggaggaggaagatggag 143
           ||||||||||||||||||||
Sbjct: 253 agaggaggaggaagatggag 272
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>emb|AL096870.5|CNS00YVI Human chromosome 14 DNA sequence BAC R-934B9 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 196533

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 262   acctcccaccgggtttctcc 281
             ||||||||||||||||||||
Sbjct: 42143 acctcccaccgggtttctcc 42124
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>gb|AE003593.2| Drosophila melanogaster chromosome 3L, section 74 of 83 of the complete
              sequence
          Length = 313157

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 136    agatggaggtggagatgcag 155
              ||||||||||||||||||||
Sbjct: 137725 agatggaggtggagatgcag 137706
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>emb|AL158801.4|CNS01RGN Human chromosome 14 DNA sequence BAC R-665C16 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 205860

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 125    gaggaggaggaagatggagg 144
              ||||||||||||||||||||
Sbjct: 158024 gaggaggaggaagatggagg 158043
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>emb|AL139316.5|CNS01DXH Human chromosome 14 DNA sequence BAC R-698F20 of library RPCI-11 from
            chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 192440

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 125  gaggaggaggaagatggagg 144
            ||||||||||||||||||||
Sbjct: 4425 gaggaggaggaagatggagg 4444
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>gb|AF061871.1|AF061871 Homo sapiens collagen type XII alpha 1 (COL12A1) gene, promoter
            region, exons 1 and 2, and partial cds
          Length = 5380

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 124  agaggaggaggaagatggaggtgg 147
            ||||| ||||||||||||||||||
Sbjct: 1598 agagggggaggaagatggaggtgg 1621
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>emb|AJ298878.1|BTA298878 Bos taurus prp gene for prion protein
          Length = 78056

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 32    tccctgctactgctgtctgctgct 55
             |||||||||||||| |||||||||
Sbjct: 42274 tccctgctactgctctctgctgct 42297
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>gb|AC132286.3| Mus musculus BAC clone RP24-299C19 from 1, complete sequence
          Length = 192877

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 124   agaggaggaggaagatggag 143
             ||||||||||||||||||||
Sbjct: 11867 agaggaggaggaagatggag 11886
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>gb|AC154362.1| Mus musculus BAC clone RP23-154E1 from 14, complete sequence
          Length = 205650

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 124    agaggaggaggaagatggag 143
              ||||||||||||||||||||
Sbjct: 117585 agaggaggaggaagatggag 117604
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>gb|AC124527.5| Mus musculus BAC clone RP23-411B11 from 1, complete sequence
          Length = 189288

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 124    agaggaggaggaagatggag 143
              ||||||||||||||||||||
Sbjct: 188975 agaggaggaggaagatggag 188994
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>dbj|AP005136.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-715F3, complete
             sequence
          Length = 174547

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 125   gaggaggaggaagatggagg 144
             ||||||||||||||||||||
Sbjct: 54284 gaggaggaggaagatggagg 54303
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>gb|AC165368.5| Mus musculus BAC clone RP23-28L24 from chromosome 1, complete sequence
          Length = 216981

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 125    gaggaggaggaagatggaggtgga 148
              |||||||| |||||||||||||||
Sbjct: 187372 gaggaggaagaagatggaggtgga 187349
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>emb|AL954801.1| Mouse DNA sequence from clone RP23-171K6 on chromosome 2, complete
             sequence
          Length = 73066

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 128   gaggaggaagatggaggtgg 147
             ||||||||||||||||||||
Sbjct: 67620 gaggaggaagatggaggtgg 67639
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>gb|M98392.1|DOGOST48A Canis familiaris oligosaccharyltransferase 48 kDa subunit (OST48)
           mRNA, complete cds
          Length = 1597

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 125 gaggaggaggaagatggagg 144
           ||||||||||||||||||||
Sbjct: 9   gaggaggaggaagatggagg 28


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,680,888
Number of Sequences: 3902068
Number of extensions: 3680888
Number of successful extensions: 179455
Number of sequences better than 10.0: 109
Number of HSP's better than 10.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 178578
Number of HSP's gapped (non-prelim): 870
length of query: 389
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 367
effective length of database: 17,147,199,772
effective search space: 6293022316324
effective search space used: 6293022316324
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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