Clone Name | bart58d04 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_190404.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1296 Score = 285 bits (144), Expect = 6e-74 Identities = 207/228 (90%) Strand = Plus / Plus Query: 182 aaggccaccagccacctgctcatgggccccgactgggccgtcaacctcgaaatctgcgac 241 ||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 70 aaggcgacaagccacctgctcatggggcccgactgggccgtcaacctcgaaatctgcgac 129 Query: 242 atcatcaacgccgacgtctggcaaacaaaagatgtggtaaaggcagtgaagaagcgattg 301 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | Sbjct: 130 atcatcaacgccgacgtctggcaaacaaaggatgtggtaaaggcagtgaagaagcgacta 189 Query: 302 caacataaggacccgaaagttcagtactatgctctgacgttgttggagacgatgatgaag 361 || | || ||||| |||||||||| ||||||| ||||| | |||||||| ||||||||| Sbjct: 190 cagaacaaagacccaaaagttcagttctatgctttgacgctcttggagactatgatgaag 249 Query: 362 aattgcggtgaatatgttcagtttgaagttgctgaacagcatgttctg 409 ||||| |||||||||||||| ||||||||||||| || ||||||||| Sbjct: 250 aattgtggtgaatatgttcaacttgaagttgctgagcaacatgttctg 297
>dbj|AK070492.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048B11, full insert sequence Length = 2092 Score = 285 bits (144), Expect = 6e-74 Identities = 207/228 (90%) Strand = Plus / Plus Query: 182 aaggccaccagccacctgctcatgggccccgactgggccgtcaacctcgaaatctgcgac 241 ||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 123 aaggcgacaagccacctgctcatggggcccgactgggccgtcaacctcgaaatctgcgac 182 Query: 242 atcatcaacgccgacgtctggcaaacaaaagatgtggtaaaggcagtgaagaagcgattg 301 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | Sbjct: 183 atcatcaacgccgacgtctggcaaacaaaggatgtggtaaaggcagtgaagaagcgacta 242 Query: 302 caacataaggacccgaaagttcagtactatgctctgacgttgttggagacgatgatgaag 361 || | || ||||| |||||||||| ||||||| ||||| | |||||||| ||||||||| Sbjct: 243 cagaacaaagacccaaaagttcagttctatgctttgacgctcttggagactatgatgaag 302 Query: 362 aattgcggtgaatatgttcagtttgaagttgctgaacagcatgttctg 409 ||||| |||||||||||||| ||||||||||||| || ||||||||| Sbjct: 303 aattgtggtgaatatgttcaacttgaagttgctgagcaacatgttctg 350
>dbj|AK065069.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001K05, full insert sequence Length = 2241 Score = 184 bits (93), Expect = 1e-43 Identities = 189/221 (85%) Strand = Plus / Plus Query: 179 gacaaggccaccagccacctgctcatgggccccgactgggccgtcaacctcgaaatctgc 238 |||||||| || ||||||||||| |||||||||||||||| |||||||||| || ||| Sbjct: 139 gacaaggcgacgagccacctgctgcagggccccgactgggccatcaacctcgagatatgc 198 Query: 239 gacatcatcaacgccgacgtctggcaaacaaaagatgtggtaaaggcagtgaagaagcga 298 |||| | ||||||||||| |||||||||||| ||||||||||| || ||||||||||| Sbjct: 199 gacaccctcaacgccgaccgctggcaaacaaaggatgtggtaaaagctgtgaagaagcgg 258 Query: 299 ttgcaacataaggacccgaaagttcagtactatgctctgacgttgttggagacgatgatg 358 ||||||||||| || || | |||||||| | || |||||||||||||||| |||||| Sbjct: 259 ttgcaacataaagatccaagagttcagtttttcactttgacgttgttggagacaatgatg 318 Query: 359 aagaattgcggtgaatatgttcagtttgaagttgctgaaca 399 ||||| || ||||||||||| || |||||||||| |||||| Sbjct: 319 aagaactgtggtgaatatgtccattttgaagttgttgaaca 359
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 137 bits (69), Expect = 3e-29 Identities = 78/81 (96%) Strand = Plus / Minus Query: 182 aaggccaccagccacctgctcatgggccccgactgggccgtcaacctcgaaatctgcgac 241 ||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 35311952 aaggcgacaagccacctgctcatggggcccgactgggccgtcaacctcgaaatctgcgac 35311893 Query: 242 atcatcaacgccgacgtctgg 262 ||||||||||||||||||||| Sbjct: 35311892 atcatcaacgccgacgtctgg 35311872 Score = 83.8 bits (42), Expect = 4e-13 Identities = 60/66 (90%) Strand = Plus / Minus Query: 344 ttggagacgatgatgaagaattgcggtgaatatgttcagtttgaagttgctgaacagcat 403 |||||||| |||||||||||||| |||||||||||||| ||||||||||||| || ||| Sbjct: 35311056 ttggagactatgatgaagaattgtggtgaatatgttcaacttgaagttgctgagcaacat 35310997 Query: 404 gttctg 409 |||||| Sbjct: 35310996 gttctg 35310991 Score = 79.8 bits (40), Expect = 6e-12 Identities = 70/80 (87%) Strand = Plus / Minus Query: 261 ggcaaacaaaagatgtggtaaaggcagtgaagaagcgattgcaacataaggacccgaaag 320 |||||||||| ||||||||||||||||||||||||||| | || | || ||||| |||| Sbjct: 35311322 ggcaaacaaaggatgtggtaaaggcagtgaagaagcgactacagaacaaagacccaaaag 35311263 Query: 321 ttcagtactatgctctgacg 340 |||||| ||||||| ||||| Sbjct: 35311262 ttcagttctatgctttgacg 35311243
>dbj|AP003315.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439E11 Length = 146083 Score = 137 bits (69), Expect = 3e-29 Identities = 78/81 (96%) Strand = Plus / Minus Query: 182 aaggccaccagccacctgctcatgggccccgactgggccgtcaacctcgaaatctgcgac 241 ||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 75813 aaggcgacaagccacctgctcatggggcccgactgggccgtcaacctcgaaatctgcgac 75754 Query: 242 atcatcaacgccgacgtctgg 262 ||||||||||||||||||||| Sbjct: 75753 atcatcaacgccgacgtctgg 75733 Score = 83.8 bits (42), Expect = 4e-13 Identities = 60/66 (90%) Strand = Plus / Minus Query: 344 ttggagacgatgatgaagaattgcggtgaatatgttcagtttgaagttgctgaacagcat 403 |||||||| |||||||||||||| |||||||||||||| ||||||||||||| || ||| Sbjct: 74917 ttggagactatgatgaagaattgtggtgaatatgttcaacttgaagttgctgagcaacat 74858 Query: 404 gttctg 409 |||||| Sbjct: 74857 gttctg 74852 Score = 79.8 bits (40), Expect = 6e-12 Identities = 70/80 (87%) Strand = Plus / Minus Query: 261 ggcaaacaaaagatgtggtaaaggcagtgaagaagcgattgcaacataaggacccgaaag 320 |||||||||| ||||||||||||||||||||||||||| | || | || ||||| |||| Sbjct: 75183 ggcaaacaaaggatgtggtaaaggcagtgaagaagcgactacagaacaaagacccaaaag 75124 Query: 321 ttcagtactatgctctgacg 340 |||||| ||||||| ||||| Sbjct: 75123 ttcagttctatgctttgacg 75104
>gb|AC135924.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0486C01, complete sequence Length = 146432 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 179 gacaaggccaccagccacctgctcatgggccccgactgggccgtcaacctcgaaatctgc 238 |||||||| || ||||||||||| |||||||||||||||| |||||||||| || ||| Sbjct: 138691 gacaaggcgacgagccacctgctgcagggccccgactgggccatcaacctcgagatatgc 138750 Query: 239 gacatcatcaacgccgac 256 |||| | ||||||||||| Sbjct: 138751 gacaccctcaacgccgac 138768 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 340 gttgttggagacgatgatgaagaattgcggtgaatatgttcagtttgaagttgctgaaca 399 |||||||||||| ||||||||||| || ||||||||||| || |||||||||| |||||| Sbjct: 139895 gttgttggagacaatgatgaagaactgtggtgaatatgtccattttgaagttgttgaaca 139954 Score = 67.9 bits (34), Expect = 2e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 261 ggcaaacaaaagatgtggtaaaggcagtgaagaagcgattgcaacataaggacccgaaag 320 |||||||||| ||||||||||| || ||||||||||| ||||||||||| || || | || Sbjct: 139632 ggcaaacaaaggatgtggtaaaagctgtgaagaagcggttgcaacataaagatccaagag 139691 Query: 321 ttcagt 326 |||||| Sbjct: 139692 ttcagt 139697
>gb|AC144743.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0009H09, complete sequence Length = 148740 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 179 gacaaggccaccagccacctgctcatgggccccgactgggccgtcaacctcgaaatctgc 238 |||||||| || ||||||||||| |||||||||||||||| |||||||||| || ||| Sbjct: 32322 gacaaggcgacgagccacctgctgcagggccccgactgggccatcaacctcgagatatgc 32381 Query: 239 gacatcatcaacgccgac 256 |||| | ||||||||||| Sbjct: 32382 gacaccctcaacgccgac 32399 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 340 gttgttggagacgatgatgaagaattgcggtgaatatgttcagtttgaagttgctgaaca 399 |||||||||||| ||||||||||| || ||||||||||| || |||||||||| |||||| Sbjct: 33526 gttgttggagacaatgatgaagaactgtggtgaatatgtccattttgaagttgttgaaca 33585 Score = 67.9 bits (34), Expect = 2e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 261 ggcaaacaaaagatgtggtaaaggcagtgaagaagcgattgcaacataaggacccgaaag 320 |||||||||| ||||||||||| || ||||||||||| ||||||||||| || || | || Sbjct: 33263 ggcaaacaaaggatgtggtaaaagctgtgaagaagcggttgcaacataaagatccaagag 33322 Query: 321 ttcagt 326 |||||| Sbjct: 33323 ttcagt 33328
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 179 gacaaggccaccagccacctgctcatgggccccgactgggccgtcaacctcgaaatctgc 238 |||||||| || ||||||||||| |||||||||||||||| |||||||||| || ||| Sbjct: 23206916 gacaaggcgacgagccacctgctgcagggccccgactgggccatcaacctcgagatatgc 23206975 Query: 239 gacatcatcaacgccgac 256 |||| | ||||||||||| Sbjct: 23206976 gacaccctcaacgccgac 23206993 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 340 gttgttggagacgatgatgaagaattgcggtgaatatgttcagtttgaagttgctgaaca 399 |||||||||||| ||||||||||| || ||||||||||| || |||||||||| |||||| Sbjct: 23208120 gttgttggagacaatgatgaagaactgtggtgaatatgtccattttgaagttgttgaaca 23208179 Score = 67.9 bits (34), Expect = 2e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 261 ggcaaacaaaagatgtggtaaaggcagtgaagaagcgattgcaacataaggacccgaaag 320 |||||||||| ||||||||||| || ||||||||||| ||||||||||| || || | || Sbjct: 23207857 ggcaaacaaaggatgtggtaaaagctgtgaagaagcggttgcaacataaagatccaagag 23207916 Query: 321 ttcagt 326 |||||| Sbjct: 23207917 ttcagt 23207922 Score = 46.1 bits (23), Expect = 0.089 Identities = 53/63 (84%) Strand = Plus / Minus Query: 179 gacaaggccaccagccacctgctcatgggccccgactgggccgtcaacctcgaaatctgc 238 ||||||||||| ||| | ||||| | |||||||||||| || ||||| |||| |||||| Sbjct: 15744686 gacaaggccacgagcgagctgctgctcggccccgactggaccctcaacatcgacatctgc 15744627 Query: 239 gac 241 ||| Sbjct: 15744626 gac 15744624
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 56.0 bits (28), Expect = 9e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 199 gctcatgggccccgactgggccgtcaacctcgaaatctgcgacatcatcaac 250 |||||| || ||||||||| || |||||||||| |||||||||||| ||||| Sbjct: 13005904 gctcatcgggcccgactggtccctcaacctcgagatctgcgacatcctcaac 13005955
>dbj|AP003763.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0531C01 Length = 158574 Score = 56.0 bits (28), Expect = 9e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 199 gctcatgggccccgactgggccgtcaacctcgaaatctgcgacatcatcaac 250 |||||| || ||||||||| || |||||||||| |||||||||||| ||||| Sbjct: 44705 gctcatcgggcccgactggtccctcaacctcgagatctgcgacatcctcaac 44756
>dbj|AP003619.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0577H07 Length = 126757 Score = 56.0 bits (28), Expect = 9e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 199 gctcatgggccccgactgggccgtcaacctcgaaatctgcgacatcatcaac 250 |||||| || ||||||||| || |||||||||| |||||||||||| ||||| Sbjct: 88281 gctcatcgggcccgactggtccctcaacctcgagatctgcgacatcctcaac 88332
>dbj|AK101738.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061J09, full insert sequence Length = 2528 Score = 56.0 bits (28), Expect = 9e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 199 gctcatgggccccgactgggccgtcaacctcgaaatctgcgacatcatcaac 250 |||||| || ||||||||| || |||||||||| |||||||||||| ||||| Sbjct: 183 gctcatcgggcccgactggtccctcaacctcgagatctgcgacatcctcaac 234
>dbj|AK058294.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-F02, full insert sequence Length = 2291 Score = 56.0 bits (28), Expect = 9e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 199 gctcatgggccccgactgggccgtcaacctcgaaatctgcgacatcatcaac 250 |||||| || ||||||||| || |||||||||| |||||||||||| ||||| Sbjct: 207 gctcatcgggcccgactggtccctcaacctcgagatctgcgacatcctcaac 258
>ref|NM_005488.1| Homo sapiens target of myb1 (chicken) (TOM1), mRNA Length = 2310 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | || ||||||||||||||||||| Sbjct: 146 gactgggccctcaacatggagatctgcgacatcatcaacg 185
>ref|XM_515099.1| PREDICTED: Pan troglodytes similar to Target of Myb protein 1 (LOC458789), mRNA Length = 2719 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | || ||||||||||||||||||| Sbjct: 631 gactgggccctcaacatggagatctgcgacatcatcaacg 670
>gb|AC132352.3| Mus musculus BAC clone RP24-97D9 from chromosome 6, complete sequence Length = 168117 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Minus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | |||||||| ||||||||||||| Sbjct: 84697 gactgggccctcaacatggaaatctgtgacatcatcaacg 84658
>gb|BC046151.1| Homo sapiens target of myb1 (chicken), mRNA (cDNA clone MGC:57674 IMAGE:6470390), complete cds Length = 2263 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | || ||||||||||||||||||| Sbjct: 88 gactgggccctcaacatggagatctgcgacatcatcaacg 127
>gb|BC040006.1| Homo sapiens target of myb1 (chicken), mRNA (cDNA clone IMAGE:6058445), partial cds Length = 2302 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | || ||||||||||||||||||| Sbjct: 103 gactgggccctcaacatggagatctgcgacatcatcaacg 142
>ref|XM_972777.1| PREDICTED: Mus musculus similar to TOM1 (LOC545878), mRNA Length = 2202 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | |||||||| ||||||||||||| Sbjct: 91 gactgggccctcaacatggaaatctgtgacatcatcaacg 130
>ref|XM_988907.1| PREDICTED: Mus musculus similar to TOM1, transcript variant 2 (LOC545878), mRNA Length = 2151 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | |||||||| ||||||||||||| Sbjct: 170 gactgggccctcaacatggaaatctgtgacatcatcaacg 209
>ref|XM_988866.1| PREDICTED: Mus musculus similar to TOM1, transcript variant 1 (LOC545878), mRNA Length = 2135 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | |||||||| ||||||||||||| Sbjct: 169 gactgggccctcaacatggaaatctgtgacatcatcaacg 208
>ref|XM_988938.1| PREDICTED: Mus musculus similar to TOM1, transcript variant 3 (LOC545878), mRNA Length = 2220 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | |||||||| ||||||||||||| Sbjct: 170 gactgggccctcaacatggaaatctgtgacatcatcaacg 209
>ref|XM_989015.1| PREDICTED: Mus musculus similar to TOM1, transcript variant 5 (LOC545878), mRNA Length = 2286 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | |||||||| ||||||||||||| Sbjct: 170 gactgggccctcaacatggaaatctgtgacatcatcaacg 209
>ref|XM_988980.1| PREDICTED: Mus musculus similar to TOM1, transcript variant 4 (LOC545878), mRNA Length = 2226 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | |||||||| ||||||||||||| Sbjct: 170 gactgggccctcaacatggaaatctgtgacatcatcaacg 209
>ref|XM_897680.2| PREDICTED: Mus musculus similar to TOM1, transcript variant 4 (LOC545878), mRNA Length = 2151 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | |||||||| ||||||||||||| Sbjct: 170 gactgggccctcaacatggaaatctgtgacatcatcaacg 209
>ref|XM_897664.2| PREDICTED: Mus musculus similar to TOM1, transcript variant 3 (LOC545878), mRNA Length = 2135 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | |||||||| ||||||||||||| Sbjct: 169 gactgggccctcaacatggaaatctgtgacatcatcaacg 208
>ref|XM_001003818.1| PREDICTED: Mus musculus similar to TOM1, transcript variant 5 (LOC545878), mRNA Length = 2220 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | |||||||| ||||||||||||| Sbjct: 170 gactgggccctcaacatggaaatctgtgacatcatcaacg 209
>ref|XM_620367.3| PREDICTED: Mus musculus similar to TOM1, transcript variant 1 (LOC545878), mRNA Length = 2286 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | |||||||| ||||||||||||| Sbjct: 170 gactgggccctcaacatggaaatctgtgacatcatcaacg 209
>ref|XM_001003823.1| PREDICTED: Mus musculus similar to TOM1, transcript variant 6 (LOC545878), mRNA Length = 2226 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | |||||||| ||||||||||||| Sbjct: 170 gactgggccctcaacatggaaatctgtgacatcatcaacg 209
>gb|AY358980.1| Homo sapiens clone DNA62813 TOM1 (UNQ1844) mRNA, complete cds Length = 1300 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | || ||||||||||||||||||| Sbjct: 145 gactgggccctcaacatggagatctgcgacatcatcaacg 184
>gb|AC149809.10| Medicago truncatula clone mth2-154h8, complete sequence Length = 98053 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 269 aaagatgtggtaaaggcagtgaagaagcgattgcaacata 308 |||||||||||||| || ||||||||| |||| ||||||| Sbjct: 70400 aaagatgtggtaaaagctgtgaagaagagattacaacata 70439
>emb|AJ006972.1|MUS6972 Mus musculus mRNA for TOM1 protein Length = 2253 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | |||||||| ||||||||||||| Sbjct: 152 gactgggccctcaacatggaaatctgtgacatcatcaacg 191
>ref|NM_011622.1| Mus musculus target of myb1 homolog (chicken) (Tom1), mRNA Length = 2253 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | |||||||| ||||||||||||| Sbjct: 152 gactgggccctcaacatggaaatctgtgacatcatcaacg 191
>emb|AL008635.1|HS510H16 Human DNA sequence from clone RP3-510H16 on chromosome 22q12.1-12.3, complete sequence Length = 102484 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | || ||||||||||||||||||| Sbjct: 77703 gactgggccctcaacatggagatctgcgacatcatcaacg 77742
>gb|AC084823.11| Mus Musculus Strain C57BL6/J chromosome 8 BAC, RP23-290L7, Complete Sequence, complete sequence Length = 212133 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | |||||||| ||||||||||||| Sbjct: 58903 gactgggccctcaacatggaaatctgtgacatcatcaacg 58942
>emb|CR626351.1| full-length cDNA clone CS0DF002YP19 of Fetal brain of Homo sapiens (human) Length = 2177 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | || ||||||||||||||||||| Sbjct: 134 gactgggccctcaacatggagatctgcgacatcatcaacg 173
>emb|CR621107.1| full-length cDNA clone CS0DB002YE23 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 2168 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | || ||||||||||||||||||| Sbjct: 101 gactgggccctcaacatggagatctgcgacatcatcaacg 140
>emb|CR617054.1| full-length cDNA clone CS0DD005YL21 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 2263 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | || ||||||||||||||||||| Sbjct: 117 gactgggccctcaacatggagatctgcgacatcatcaacg 156
>dbj|AK097926.1| Homo sapiens cDNA FLJ40607 fis, clone THYMU2012273, highly similar to Target of myb1 Length = 2590 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | || ||||||||||||||||||| Sbjct: 120 gactgggccctcaacatggagatctgcgacatcatcaacg 159
>dbj|AK097066.1| Homo sapiens cDNA FLJ39747 fis, clone SMINT2017432, highly similar to Target of myb1 Length = 1892 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | || ||||||||||||||||||| Sbjct: 124 gactgggccctcaacatggagatctgcgacatcatcaacg 163
>emb|CR611082.1| full-length cDNA clone CS0DI078YP20 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 2252 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | || ||||||||||||||||||| Sbjct: 144 gactgggccctcaacatggagatctgcgacatcatcaacg 183
>emb|CR608920.1| full-length cDNA clone CS0DI058YO21 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 2227 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | || ||||||||||||||||||| Sbjct: 105 gactgggccctcaacatggagatctgcgacatcatcaacg 144
>emb|CR603578.1| full-length cDNA clone CS0DC026YK09 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 2214 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | || ||||||||||||||||||| Sbjct: 101 gactgggccctcaacatggagatctgcgacatcatcaacg 140
>emb|CR596343.1| full-length cDNA clone CS0DI070YG08 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 2299 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | || ||||||||||||||||||| Sbjct: 144 gactgggccctcaacatggagatctgcgacatcatcaacg 183
>emb|CR595971.1| full-length cDNA clone CS0DC002YD05 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 2286 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | || ||||||||||||||||||| Sbjct: 140 gactgggccctcaacatggagatctgcgacatcatcaacg 179
>gb|AC005290.3| AC005290, complete sequence Length = 66157 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Minus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | |||||||| ||||||||||||| Sbjct: 57436 gactgggccctcaacatggaaatctgtgacatcatcaacg 57397
>dbj|AK160403.1| Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched library, clone:1500002P10 product:target of myb1 homolog (chicken), full insert sequence Length = 2219 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | |||||||| ||||||||||||| Sbjct: 121 gactgggccctcaacatggaaatctgtgacatcatcaacg 160
>dbj|AK150143.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530136M24 product:target of myb1 homolog (chicken), full insert sequence Length = 1770 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | |||||||| ||||||||||||| Sbjct: 125 gactgggccctcaacatggaaatctgtgacatcatcaacg 164
>gb|AF285839.1|AF285839S1 Mus musculus NKR-P1A (NKR-P1A) gene, exon 1 Length = 32428 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Minus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | |||||||| ||||||||||||| Sbjct: 9383 gactgggccctcaacatggaaatctgtgacatcatcaacg 9344
>dbj|AK051245.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130020P04 product:target of myb1 homolog (chicken), full insert sequence Length = 2268 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | |||||||| ||||||||||||| Sbjct: 157 gactgggccctcaacatggaaatctgtgacatcatcaacg 196
>dbj|AK028398.1| Mus musculus 18 days pregnant adult female placenta and extra embryonic tissue cDNA, RIKEN full-length enriched library, clone:3830432G06 product:target of myb1 homolog (chicken), full insert sequence Length = 2221 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | |||||||| ||||||||||||| Sbjct: 116 gactgggccctcaacatggaaatctgtgacatcatcaacg 155
>gb|BC093520.1| Mus musculus target of myb1 homolog (chicken), mRNA (cDNA clone MGC:103153 IMAGE:2866013), complete cds Length = 2216 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | |||||||| ||||||||||||| Sbjct: 103 gactgggccctcaacatggaaatctgtgacatcatcaacg 142
>dbj|AK184431.1| Mus musculus cDNA, clone:Y0G0129P12, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000051450, based on BLAT search Length = 217 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | |||||||| ||||||||||||| Sbjct: 51 gactgggccctcaacatggaaatctgtgacatcatcaacg 90
>dbj|AK026576.1| Homo sapiens cDNA: FLJ22923 fis, clone KAT06970, highly similar to HSP6973 Homo sapiens mRNA for TOM1 protein Length = 2343 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | || ||||||||||||||||||| Sbjct: 163 gactgggccctcaacatggagatctgcgacatcatcaacg 202
>emb|CR456595.1| Homo sapiens TOM1L1 full length open reading frame (ORF) cDNA clone (cDNA clone C22ORF:pGEM.TOM1L1) Length = 1556 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | || ||||||||||||||||||| Sbjct: 106 gactgggccctcaacatggagatctgcgacatcatcaacg 145
>gb|BC021633.1| Mus musculus target of myb1 homolog (chicken), mRNA (cDNA clone MGC:13816 IMAGE:4208226), complete cds Length = 1673 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | |||||||| ||||||||||||| Sbjct: 138 gactgggccctcaacatggaaatctgtgacatcatcaacg 177
>emb|Z82097.1|HSF77D12 Human DNA sequence from clone CITF22-77D12 on chromosome 22, complete sequence Length = 41611 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Minus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | || ||||||||||||||||||| Sbjct: 20467 gactgggccctcaacatggagatctgcgacatcatcaacg 20428
>emb|AL603864.8| Mouse DNA sequence from clone RP23-478N15 on chromosome 15, complete sequence Length = 178412 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Minus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | |||||||| ||||||||||||| Sbjct: 27703 gactgggccctcaacatggaaatctgtgacatcatcaacg 27664
>emb|AL603837.8| Mouse DNA sequence from clone RP23-254F2 on chromosome 15, complete sequence Length = 202904 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | |||||||| ||||||||||||| Sbjct: 70080 gactgggccctcaacatggaaatctgtgacatcatcaacg 70119
>emb|AJ006973.1|HSP6973 Homo sapiens mRNA for TOM1 protein Length = 2310 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | || ||||||||||||||||||| Sbjct: 146 gactgggccctcaacatggagatctgcgacatcatcaacg 185
>gb|AC134342.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0053E01, complete sequence Length = 180426 Score = 46.1 bits (23), Expect = 0.089 Identities = 53/63 (84%) Strand = Plus / Minus Query: 179 gacaaggccaccagccacctgctcatgggccccgactgggccgtcaacctcgaaatctgc 238 ||||||||||| ||| | ||||| | |||||||||||| || ||||| |||| |||||| Sbjct: 136790 gacaaggccacgagcgagctgctgctcggccccgactggaccctcaacatcgacatctgc 136731 Query: 239 gac 241 ||| Sbjct: 136730 gac 136728
>ref|XM_822685.1| Trypanosoma brucei TREU927 hypothetical protein (Tb10.389.0600) partial mRNA Length = 2916 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 346 ggagacgatgatgaagaattgcggt 370 |||||||||||||||| |||||||| Sbjct: 241 ggagacgatgatgaagcattgcggt 265
>ref|NM_001030153.1| Danio rerio potassium inwardly-rectifying channel, subfamily J, member 8 (kcnj8), mRNA Length = 1251 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 182 aaggccaccagccacctgctcatgg 206 |||||||||||||||| |||||||| Sbjct: 287 aaggccaccagccaccagctcatgg 263
>dbj|AB231936.1| Danio rerio zKir6.1 mRNA for Kir6.1 like, complete cds Length = 1251 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 182 aaggccaccagccacctgctcatgg 206 |||||||||||||||| |||||||| Sbjct: 287 aaggccaccagccaccagctcatgg 263
>emb|AL807827.11| Zebrafish DNA sequence from clone CH211-220J6, complete sequence Length = 199141 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 272 gatgtggtaaaggcagtgaag 292 ||||||||||||||||||||| Sbjct: 69750 gatgtggtaaaggcagtgaag 69770
>emb|BX571719.3| Zebrafish DNA sequence from clone DKEY-183C2 in linkage group 4, complete sequence Length = 111614 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 182 aaggccaccagccacctgctcatgg 206 |||||||||||||||| |||||||| Sbjct: 35169 aaggccaccagccaccagctcatgg 35193
>emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E (5 of 5) Length = 2199546 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 262 gcaaacaaaagatgtggtaaa 282 ||||||||||||||||||||| Sbjct: 78523 gcaaacaaaagatgtggtaaa 78543
>emb|Z82064.1|CEW02B9 Caenorhabditis elegans Cosmid W02B9, complete sequence Length = 32215 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 gttgttggagacgatgatga 359 |||||||||||||||||||| Sbjct: 23894 gttgttggagacgatgatga 23875
>emb|AL592114.13| Human DNA sequence from clone RP11-203F10 on chromosome 1 Contains the 5' end of the REN gene for renin, the KISS1 gene for KiSS-1 metastasis-suppressor, a novel gene (FLJ42654), the 3' end of the gene for phosphoinositol 3-phosphate-binding protein-3 (PEPP3) and a novel gene, complete sequence Length = 189023 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 ggccaccagccacctgctca 203 |||||||||||||||||||| Sbjct: 33258 ggccaccagccacctgctca 33277
>emb|AL645639.17| Mouse DNA sequence from clone RP23-370G8 on chromosome 11 Contains a novel gene (LOC327917), the 5' end of the Adamts2 gene for a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif 2, two novel genes (4930579K21) and a CpG island, complete sequence Length = 188520 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 gccaccagccacctgctcat 204 |||||||||||||||||||| Sbjct: 82347 gccaccagccacctgctcat 82366
>emb|CR926028.1| Pongo pygmaeus mRNA; cDNA DKFZp459G2220 (from clone DKFZp459G2220) Length = 2312 Score = 40.1 bits (20), Expect = 5.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | || ||||| ||||||||||||| Sbjct: 130 gactgggccctcaacatggagatctgtgacatcatcaacg 169
>emb|CR859553.1| Pongo pygmaeus mRNA; cDNA DKFZp459D2212 (from clone DKFZp459D2212) Length = 2318 Score = 40.1 bits (20), Expect = 5.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| ||||| | || ||||| ||||||||||||| Sbjct: 145 gactgggccctcaacatggagatctgtgacatcatcaacg 184
>gb|AC008213.4|AC008213 Drosophila melanogaster, chromosome 3R, region 97B-97B, BAC clone BACR15K06, complete sequence Length = 183370 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 tgaatatgttcagtttgaag 389 |||||||||||||||||||| Sbjct: 56136 tgaatatgttcagtttgaag 56117
>gb|AC005813.13|AC005813 Drosophila melanogaster, chromosome 3R, region 97B2-97B9, BAC clone BACR48G23, complete sequence Length = 166543 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 tgaatatgttcagtttgaag 389 |||||||||||||||||||| Sbjct: 13269 tgaatatgttcagtttgaag 13250
>gb|AC008212.8|AC008212 Drosophila melanogaster, chromosome 3R, region 97A-97B, BAC clone BACR19L21, complete sequence Length = 162876 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 tgaatatgttcagtttgaag 389 |||||||||||||||||||| Sbjct: 143182 tgaatatgttcagtttgaag 143163
>gb|AC117516.5| Homo sapiens 3 BAC RP11-845C18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172997 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 aaacaaaagatgtggtaaag 283 |||||||||||||||||||| Sbjct: 3624 aaacaaaagatgtggtaaag 3605
>dbj|AK201506.1| Mus musculus cDNA, clone:Y1G0138H12, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000051450, based on BLAT search Length = 217 Score = 40.1 bits (20), Expect = 5.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 212 gactgggccgtcaacctcgaaatctgcgacatcatcaacg 251 ||||||||| || || | |||||||| ||||||||||||| Sbjct: 51 gactgggccctcgacatggaaatctgtgacatcatcaacg 90
>gb|AY108707.1| Zea mays PCO142137 mRNA sequence Length = 830 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 331 tgctctgacgttgttggagacgatgatgaagaattg 366 |||||| |||||| ||||||||||||| || ||||| Sbjct: 421 tgctctcacgttgctggagacgatgataaaaaattg 456
>gb|AE003756.3| Drosophila melanogaster chromosome 3R, section 94 of 118 of the complete sequence Length = 322332 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 tgaatatgttcagtttgaag 389 |||||||||||||||||||| Sbjct: 117029 tgaatatgttcagtttgaag 117010
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 gttggagacgatgatgaaga 362 |||||||||||||||||||| Sbjct: 2079148 gttggagacgatgatgaaga 2079167 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,336,618 Number of Sequences: 3902068 Number of extensions: 2336618 Number of successful extensions: 45632 Number of sequences better than 10.0: 80 Number of HSP's better than 10.0 without gapping: 81 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 45418 Number of HSP's gapped (non-prelim): 211 length of query: 409 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 387 effective length of database: 17,147,199,772 effective search space: 6635966311764 effective search space used: 6635966311764 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)