Clone Name | bart58c11 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | LRCH4_HUMAN (O75427) Leucine-rich repeats and calponin homology ... | 29 | 2.3 | 2 | PKN2_MYXXA (P54736) Serine/threonine-protein kinase pkn2 (EC 2.7... | 29 | 3.0 | 3 | FRAS1_MOUSE (Q80T14) Extracellular matrix protein FRAS1 precursor | 28 | 6.8 |
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>LRCH4_HUMAN (O75427) Leucine-rich repeats and calponin homology| domain-containing protein 4 (Leucine-rich neuronal protein) Length = 683 Score = 29.3 bits (64), Expect = 2.3 Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 3/82 (3%) Frame = +3 Query: 96 EGDAXAEPAHLDGRPAHVVGHXXXXXXXXXXXXXXXQSQAGWGDHAGHVRR---AGERAR 266 +G A +P +D +HV G AG + A RR AGE R Sbjct: 344 DGSADGDPVQIDFIDSHVPGEDEERGTVEEQRPPELSPGAGDRERAPSSRREEPAGEERR 403 Query: 267 RPGSEQQ*KETDVRFKDEGXDW 332 RP + Q +E + R + + W Sbjct: 404 RPDTLQLWQERERRQQQQSGAW 425
>PKN2_MYXXA (P54736) Serine/threonine-protein kinase pkn2 (EC 2.7.11.1)| Length = 830 Score = 28.9 bits (63), Expect = 3.0 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = +1 Query: 37 PEREAVTIEHGGQHSSGAMERATPVRSPHTSTA 135 P+ + T G SSG+ A P SPHT TA Sbjct: 337 PQASSGTAAFGVASSSGSASGALPAASPHTGTA 369
>FRAS1_MOUSE (Q80T14) Extracellular matrix protein FRAS1 precursor| Length = 4010 Score = 27.7 bits (60), Expect = 6.8 Identities = 10/21 (47%), Positives = 11/21 (52%) Frame = -1 Query: 122 CGLRTGVALSIAPELCCPPCS 60 C G L IAP CCP C+ Sbjct: 67 CAFEKGEVLWIAPNQCCPQCA 87 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.311 0.125 0.358 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,311,559 Number of Sequences: 219361 Number of extensions: 694028 Number of successful extensions: 1208 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1181 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1208 length of database: 80,573,946 effective HSP length: 112 effective length of database: 56,005,514 effective search space used: 1344132336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits)