>FLA7_ARATH (Q9SJ81) Fasciclin-like arabinogalactan protein 7 precursor|
          Length = 254

 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 26/80 (32%), Positives = 43/80 (53%)
 Frame = +2

Query: 215 NVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAXHSLKPGTLNSL 394
           N+T +L  AG +  F+  + ST        QAN ++ G T+F P D+A  + K   L++L
Sbjct: 46  NLTELLSVAGPFHTFLDYLLSTGVIETFQNQANNTEEGITIFVPKDDAFKAQKNPPLSNL 105

Query: 395 SQQDQVTLVQAHIVPTFYSM 454
           ++     LV  H +P +YS+
Sbjct: 106 TKDQLKQLVLFHALPHYYSL 125

>FLA8_ARATH (O22126) Fasciclin-like arabinogalactan protein 8 precursor|
           (AtAGP8)
          Length = 420

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 27/81 (33%), Positives = 43/81 (53%)
 Frame = +2

Query: 203 AAAPNVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAXHSLKPGT 382
           A+  N+T +LEKAG  T F  L+ S+     L    +  + G TVFAP+D A  +     
Sbjct: 185 ASLSNITGLLEKAGCKT-FANLLVSSGV---LKTYESAVEKGLTVFAPSDEAFKAEGVPD 240

Query: 383 LNSLSQQDQVTLVQAHIVPTF 445
           L  L+Q + V+L++ H +  +
Sbjct: 241 LTKLTQAEVVSLLEYHALAEY 261

>FLA10_ARATH (Q9LZX4) Fasciclin-like arabinogalactan protein 10 precursor|
          Length = 422

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 26/81 (32%), Positives = 43/81 (53%)
 Frame = +2

Query: 203 AAAPNVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAXHSLKPGT 382
           A   N+T +LEKAG  T F  L+ S+     +    +  + G TVFAP+D A  +     
Sbjct: 186 AGVSNITGLLEKAGCKT-FANLLVSSGV---IKTFESTVEKGLTVFAPSDEAFKARGVPD 241

Query: 383 LNSLSQQDQVTLVQAHIVPTF 445
           L +L+Q + V+L++ H +  +
Sbjct: 242 LTNLTQAEVVSLLEYHALAEY 262

>Y1483_SYNY3 (P74615) Hypothetical protein sll1483 precursor|
          Length = 180

 Score = 37.4 bits (85), Expect = 0.018
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
 Frame = +2

Query: 203 AAAPNVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAXHSLKPGT 382
           AA  +   ++E A     F  L+A+ +    + A + E    FTVFAPT++A  +L  GT
Sbjct: 40  AATDSAMTIVEVAAGNETFSTLVAAVKAADLVEALSAEGP--FTVFAPTNDAFAALPAGT 97

Query: 383 LNSL----SQQDQVTLVQAHIVP 439
           + SL    ++   V ++  H+VP
Sbjct: 98  VESLLLPENKDKLVKILTYHVVP 120

>YH35_SYNP2 (O33752) Hypothetical protein sll1735 homolog|
          Length = 133

 Score = 36.6 bits (83), Expect = 0.031
 Identities = 21/48 (43%), Positives = 27/48 (56%)
 Frame = +2

Query: 257 FIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAXHSLKPGTLNSLSQ 400
           F  L+A+ Q    +   A E D  FTVFAP D+A   L PGT+ +L Q
Sbjct: 14  FSTLVAAVQAAGLVETLAGEGD--FTVFAPNDDAFAKLPPGTIQTLVQ 59

>STAB2_HUMAN (Q8WWQ8) Stabilin-2 precursor (FEEL-2 protein) (Fasciclin EGF-like|
           laminin-type EGF-like and link domain-containing
           scavenger receptor 1) (FAS1 EGF-like and X-link
           domain-containing adhesion molecule 2) (Hyaluronan
           receptor for endocytosis) [
          Length = 2551

 Score = 35.8 bits (81), Expect = 0.053
 Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
 Frame = +2

Query: 245 QYTKFIRLMASTQQDTQLNAQANESDTG--FTVFAPTDNAXHSLKPGTLNSL----SQQD 406
           +Y+KF  L+    ++T L    +E   G  +T+F P + A +++K GTL+ L      + 
Sbjct: 527 RYSKFRSLL----EETNLGHALDEDGVGGPYTIFVPNNEALNNMKDGTLDYLLSPEGSRK 582

Query: 407 QVTLVQAHIVP 439
            + LV+ HIVP
Sbjct: 583 LLELVRYHIVP 593

>Y1735_SYNY3 (P73392) Hypothetical protein sll1735|
          Length = 133

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 16/29 (55%), Positives = 19/29 (65%)
 Frame = +2

Query: 314 ESDTGFTVFAPTDNAXHSLKPGTLNSLSQ 400
           +S   FTVFAPTD A   L PGT+ +L Q
Sbjct: 31  QSPGPFTVFAPTDTAFAKLPPGTITTLVQ 59

>STAB2_RAT (Q8CFM6) Stabilin-2 precursor (Hyaluronan receptor for endocytosis)|
           [Contains: 175 kDa stabilin-2 (175 kDa hyaluronan
           receptor for endocytosis)] (Fragment)
          Length = 1431

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
 Frame = +2

Query: 215 NVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANES-DTGFTVFAPTDNAXHSLKPGTLNS 391
           N+T V    G YTKF +L+    QD+ L +   +S  T  TVF PTD A  +L P   + 
Sbjct: 607 NLTTVAANHG-YTKFSKLI----QDSGLLSVITDSIHTPVTVFWPTDKALEALPPEQQDF 661

Query: 392 LSQQDQVTLVQAHI 433
           L  QD    +++++
Sbjct: 662 LFNQDNKDKLKSYL 675

>CROC_DROME (P32027) Fork head domain protein crocodile (FKH protein FD1)|
          Length = 508

 Score = 32.7 bits (73), Expect = 0.45
 Identities = 19/64 (29%), Positives = 28/64 (43%)
 Frame = +1

Query: 247 VHQVHPADGVDAAGHAAERAGQRVGHGLHGVRPHRQRLXQPQAGHPQLALAAGPGDARAG 426
           +H VH A    AA H A++  + V H  H + P  Q      +GH    ++   G A  G
Sbjct: 295 MHHVHHA----AAAHHAQQLQRHVAHVAHPLTPGGQGAGGQSSGHSPTTISTPHGPAHGG 350

Query: 427 AHRP 438
            + P
Sbjct: 351 WYTP 354

>BGH3_RABIT (Q95215) Transforming growth factor-beta-induced protein ig-h3|
           precursor (Beta ig-h3) (Kerato-epithelin)
           (RGD-containing collagen-associated protein) (RGD-CAP)
          Length = 683

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +2

Query: 329 FTVFAPTDNAXHSLKPGTLNSL 394
           +TVFAPT+ A  +L PG LN L
Sbjct: 537 YTVFAPTNEAFQALPPGELNKL 558

>MP70_MYCTU (P0A668) Immunogenic protein MPT70 precursor|
          Length = 193

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
 Frame = +2

Query: 293 QLNAQANESDT----GFTVFAPTDNAXHSLKPGTLNSLSQQDQV--TLVQAHIV 436
           QLN Q N  DT     +TVFAPT+ A   L   T++ L     +  +++  H+V
Sbjct: 80  QLNPQVNLVDTLNSGQYTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVV 133

>MP70_MYCBO (P0A669) Immunogenic protein MPB70 precursor|
          Length = 193

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
 Frame = +2

Query: 293 QLNAQANESDT----GFTVFAPTDNAXHSLKPGTLNSLSQQDQV--TLVQAHIV 436
           QLN Q N  DT     +TVFAPT+ A   L   T++ L     +  +++  H+V
Sbjct: 80  QLNPQVNLVDTLNSGQYTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVV 133

>MTCD_TETTH (Q8WSW3) Cadmium metallothionein precursor (MT-Cd) (Cd-MT)|
          Length = 162

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 14/53 (26%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
 Frame = -1

Query: 429 CACTSVTWSCCESELRVPGLRLXKALS-VGANTVKPVSDSLACAFSCVSCCVD 274
           C C S T +CC+S+ +       +          KPV     C     +CC D
Sbjct: 80  CCCVSKTNNCCKSDTKECCTGTGEGCKCTSCQCCKPVQQGCCCGDKAKACCTD 132

>STAB1_MOUSE (Q8R4Y4) Stabilin-1 precursor (FEEL-1 protein)|
          Length = 2571

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
 Frame = +2

Query: 215  NVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAXHSLKPGTLNSL 394
            NVTA  E  G Y  F RL+        L    + S   FT+  PTD+A  +L P   N L
Sbjct: 1728 NVTAAAESFG-YKIFSRLLTVAGLLPMLQ---DASHRPFTMLWPTDSALQALPPDRKNWL 1783

Query: 395  SQQDQ----VTLVQAHIV 436
              +D       +++ H++
Sbjct: 1784 FHEDHRDKLAAILRGHMI 1801

>STAB2_MOUSE (Q8R4U0) Stabilin-2 precursor [Contains: Short form stabilin-2]|
          Length = 2559

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 22/73 (30%), Positives = 34/73 (46%)
 Frame = +2

Query: 215  NVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAXHSLKPGTLNSL 394
            N+T V    G YTKF +L+   Q    L    +   T  T+F PTD A  +L     + L
Sbjct: 1750 NLTTVAANHG-YTKFSKLI---QDSGLLKVITDPMHTPVTLFWPTDKALQALPQEQQDFL 1805

Query: 395  SQQDQVTLVQAHI 433
              +D    ++A++
Sbjct: 1806 FNEDNKDKLKAYL 1818

>IF2_CORGL (Q8NP40) Translation initiation factor IF-2|
          Length = 1004

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
 Frame = +1

Query: 301 RAGQRVGHGLHGVRPHR----QRLXQPQAGHPQLALAAGPGDARAGAHRP 438
           R GQR G G  G RP      Q   +PQ G  Q A  A   + + G  RP
Sbjct: 263 RGGQRQGAGAGGPRPQGGPRPQGGSRPQGGSAQGAQGAPSQERQGGGRRP 312

>TRAX2_ECOLI (P22710) Protein traX|
          Length = 248

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -1

Query: 60 DDAIAARSRCWLASLRVWSP 1
          +D++AAR+  WL S  VWSP
Sbjct: 11 NDSLAARTDTWLQSFLVWSP 30

>TRAX1_ECOLI (P22709) Protein traX|
          Length = 248

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -1

Query: 60 DDAIAARSRCWLASLRVWSP 1
          +D++ AR+  WL SL VWSP
Sbjct: 11 NDSLVARTDTWLQSLLVWSP 30

>RPA1_DROME (P91875) DNA-directed RNA polymerase I largest subunit (EC 2.7.7.6)|
          Length = 1642

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 15/59 (25%), Positives = 24/59 (40%)
 Frame = +2

Query: 260 IRLMASTQQDTQLNAQANESDTGFTVFAPTDNAXHSLKPGTLNSLSQQDQVTLVQAHIV 436
           +R M     D    A   +   GFT + P DNA        L   + +D + +V  H++
Sbjct: 462 LRKMVMNGPDVHPGANYIQDKNGFTTYIPADNASKRESLAKLLLSNPKDGIKIVHRHVL 520

>MT1_TETTH (Q8T6B3) Metallothionein-1 (MT-1)|
          Length = 107

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 13/53 (24%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
 Frame = -1

Query: 429 CACTSVTWSCCESELRVPGLRLXKALS-VGANTVKPVSDSLACAFSCVSCCVD 274
           C C S T +CC+S+ +       +     G    +P      C     +CC D
Sbjct: 25  CCCVSETNNCCKSDKKECCTGTGEGCKWTGCKCCQPAKSGCCCGDKAKACCTD 77

>MT1_TETPY (O97388) Metallothionein-1 precursor (MT-1) [Contains:|
           Metallothionein-2 (MT-2)]
          Length = 107

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 13/53 (24%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
 Frame = -1

Query: 429 CACTSVTWSCCESELRVPGLRLXKALS-VGANTVKPVSDSLACAFSCVSCCVD 274
           C C S T +CC+S+ +       +     G    +P      C     +CC D
Sbjct: 25  CCCVSETNNCCKSDKKECCTGTGEGCKCTGCKCCEPAKSGCCCGDKAKACCTD 77

>MT1_TETPI (P80394) Metallothionein-1 precursor (MT-1) [Contains:|
           Metallothionein-2 (MT-2)]
          Length = 107

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 13/53 (24%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
 Frame = -1

Query: 429 CACTSVTWSCCESELRVPGLRLXKALS-VGANTVKPVSDSLACAFSCVSCCVD 274
           C C S T +CC+S+ +       +     G    +P      C     +CC D
Sbjct: 25  CCCVSETNNCCKSDKKECCTGTGEGCKCTGCKCCQPAKSGCCCGDKAKACCTD 77


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,055,468
Number of Sequences: 219361
Number of extensions: 410075
Number of successful extensions: 1803
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1797
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)