>HCFC1_MOUSE (Q61191) Host cell factor (HCF) (HCF-1) (C1 factor) [Contains: HCF|
           N-terminal chain 1; HCF N-terminal chain 2; HCF
           N-terminal chain 3; HCF N-terminal chain 4; HCF
           N-terminal chain 5; HCF N-terminal chain 6; HCF
           C-terminal chain 1; HCF C-termi
          Length = 2045

 Score = 28.5 bits (62), Expect = 5.3
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +1

Query: 55  QPSQRRMVGWTQPLPRQLH 111
           QP  +R+VGW+ P+PR  H
Sbjct: 16  QPRWKRVVGWSGPVPRPRH 34

>ASPX_HUMAN (P26436) Acrosomal protein SP-10 precursor (Acrosomal vesicle|
           protein 1)
          Length = 265

 Score = 28.5 bits (62), Expect = 5.3
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +1

Query: 4   GRPFPRNHPEGHHTDGQQPSQRRMVG 81
           G P    H EG HT G+QPS  +  G
Sbjct: 96  GEPAATEHAEGEHTVGEQPSGEQPSG 121

>HCFC1_HUMAN (P51610) Host cell factor (HCF) (HCF-1) (C1 factor) (VP16 accessory|
           protein) (VCAF) (CFF) [Contains: HCF N-terminal chain 1;
           HCF N-terminal chain 2; HCF N-terminal chain 3; HCF
           N-terminal chain 4; HCF N-terminal chain 5; HCF
           N-terminal chain
          Length = 2035

 Score = 28.5 bits (62), Expect = 5.3
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +1

Query: 55  QPSQRRMVGWTQPLPRQLH 111
           QP  +R+VGW+ P+PR  H
Sbjct: 16  QPRWKRVVGWSGPVPRPRH 34

>HCFC1_MESAU (P51611) Host cell factor (HCF) (HCF-1) (C1 factor) (VP16 accessory|
           protein) (VCAF) [Contains: HCF N-terminal chain 1; HCF
           N-terminal chain 2; HCF N-terminal chain 3; HCF
           N-terminal chain 4; HCF N-terminal chain 5; HCF
           N-terminal chain 6; HCF
          Length = 2090

 Score = 28.5 bits (62), Expect = 5.3
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +1

Query: 55  QPSQRRMVGWTQPLPRQLH 111
           QP  +R+VGW+ P+PR  H
Sbjct: 16  QPRWKRVVGWSGPVPRPRH 34

>RLUD_BUCAI (P57481) Ribosomal large subunit pseudouridine synthase D (EC|
           5.4.99.-) (rRNA-uridine isomerase D) (rRNA
           pseudouridylate synthase D)
          Length = 312

 Score = 28.5 bits (62), Expect = 5.3
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +1

Query: 13  FPRNHPEGHHTDGQQPSQRRMVGWTQPLPRQL 108
           FPR     +H     P ++ ++ WT PLP+ +
Sbjct: 274 FPRQALHANHLSLHHPIKKNVMSWTVPLPQDI 305

>ASPX_PAPHA (Q06990) Acrosomal protein SP-10 precursor (Acrosomal vesicle|
           protein 1)
          Length = 285

 Score = 28.5 bits (62), Expect = 5.3
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +1

Query: 4   GRPFPRNHPEGHHTDGQQPSQRRMVG 81
           G P    H EG HT G+QPS  +  G
Sbjct: 96  GEPAATGHAEGEHTVGEQPSGEQPSG 121

>CYSP_SCHMA (P25792) Cathepsin B-like cysteine proteinase precursor (EC|
          3.4.22.-) (Antigen Sm31)
          Length = 340

 Score = 27.7 bits (60), Expect = 9.0
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +2

Query: 38 IIQTVNNHPNAGWSA 82
          II  +N HPNAGW A
Sbjct: 33 IISYINEHPNAGWRA 47


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,926,523
Number of Sequences: 219361
Number of extensions: 448019
Number of successful extensions: 1190
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1190
length of database: 80,573,946
effective HSP length: 27
effective length of database: 74,651,199
effective search space used: 1791628776
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)