ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart58b10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1KAD7_MACFA (Q95JP6) Putative adenylate kinase 7 (EC 2.7.4.3) (Fr... 30 2.4
2UL95_HHV6U (P24444) Protein U67 29 5.4
3KAD7_HUMAN (Q96M32) Putative adenylate kinase 7 (EC 2.7.4.3) 29 5.4
4SINA3_ARATH (Q84JL3) Ubiquitin ligase SINAT3 (EC 6.3.2.-) (Seven... 28 9.2
5SINA4_ARATH (Q9STN8) Ubiquitin ligase SINAT4 (EC 6.3.2.-) (Seven... 28 9.2

>KAD7_MACFA (Q95JP6) Putative adenylate kinase 7 (EC 2.7.4.3) (Fragment)|
          Length = 533

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 11/27 (40%), Positives = 21/27 (77%)
 Frame = +3

Query: 342 PKIEMLDAAKLVGDLIEHSPKPNVIVS 422
           P I +LD A ++ ++I+H+PKP+ +V+
Sbjct: 61  PTIHVLDLAGVIQNVIDHTPKPHYLVA 87



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>UL95_HHV6U (P24444) Protein U67|
          Length = 353

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 15/37 (40%), Positives = 25/37 (67%)
 Frame = +3

Query: 354 MLDAAKLVGDLIEHSPKPNVIVSSXVRELLECPVCLV 464
           M+D  KLV  ++E++  PN++  + VR+ LEC + LV
Sbjct: 141 MIDKTKLVKKILEYAETPNLLGYTDVRD-LECLLWLV 176



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>KAD7_HUMAN (Q96M32) Putative adenylate kinase 7 (EC 2.7.4.3)|
          Length = 723

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 11/27 (40%), Positives = 20/27 (74%)
 Frame = +3

Query: 342 PKIEMLDAAKLVGDLIEHSPKPNVIVS 422
           P I +LD A ++ ++I+H PKP+ +V+
Sbjct: 251 PTIHVLDLAGVIQNVIDHVPKPHYLVA 277



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>SINA3_ARATH (Q84JL3) Ubiquitin ligase SINAT3 (EC 6.3.2.-) (Seven in absentia|
           homolog 3)
          Length = 326

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +3

Query: 420 SSXVRELLECPVCLVAMY 473
           ++ V ELLECPVC  +MY
Sbjct: 54  TTSVHELLECPVCTNSMY 71



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>SINA4_ARATH (Q9STN8) Ubiquitin ligase SINAT4 (EC 6.3.2.-) (Seven in absentia|
           homolog 4)
          Length = 327

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +3

Query: 420 SSXVRELLECPVCLVAMY 473
           ++ V ELLECPVC  +MY
Sbjct: 55  ATSVYELLECPVCTYSMY 72


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,731,429
Number of Sequences: 219361
Number of extensions: 655203
Number of successful extensions: 2102
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2102
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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