>gb|AY107277.1| Zea mays PCO081263 mRNA sequence
          Length = 785

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                          
Query: 429 gtgcgtgagctattggaatgccctgtgtgtttggttgccatgtatcc 475
           |||||||||||| ||||||||||||||||||||  ||||||||||||
Sbjct: 344 gtgcgtgagctactggaatgccctgtgtgtttgagtgccatgtatcc 390

>ref|XM_479411.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1520

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 72/85 (84%)
 Strand = Plus / Plus

                                                                       
Query: 391 agcattcaccgaaaccaaatgtcatagtttctagcantgtgcgtgagctattggaatgcc 450
           |||||||||| ||||| ||||  || || ||| ||| ||||||||||||| |||||||||
Sbjct: 259 agcattcaccaaaaccgaatgcgatggtctctggcaatgtgcgtgagctactggaatgcc 318

                                    
Query: 451 ctgtgtgtttggttgccatgtatcc 475
           |||||||| |   ||||||||||||
Sbjct: 319 ctgtgtgtctaaatgccatgtatcc 343

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 72/85 (84%)
 Strand = Plus / Plus

                                                                            
Query: 391      agcattcaccgaaaccaaatgtcatagtttctagcantgtgcgtgagctattggaatgcc 450
                |||||||||| ||||| ||||  || || ||| ||| ||||||||||||| |||||||||
Sbjct: 27755858 agcattcaccaaaaccgaatgcgatggtctctggcaatgtgcgtgagctactggaatgcc 27755917

                                         
Query: 451      ctgtgtgtttggttgccatgtatcc 475
                |||||||| |   ||||||||||||
Sbjct: 27755918 ctgtgtgtctaaatgccatgtatcc 27755942

>dbj|AP004378.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0496C02
          Length = 148419

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 72/85 (84%)
 Strand = Plus / Plus

                                                                         
Query: 391   agcattcaccgaaaccaaatgtcatagtttctagcantgtgcgtgagctattggaatgcc 450
             |||||||||| ||||| ||||  || || ||| ||| ||||||||||||| |||||||||
Sbjct: 48237 agcattcaccaaaaccgaatgcgatggtctctggcaatgtgcgtgagctactggaatgcc 48296

                                      
Query: 451   ctgtgtgtttggttgccatgtatcc 475
             |||||||| |   ||||||||||||
Sbjct: 48297 ctgtgtgtctaaatgccatgtatcc 48321

>dbj|AP003833.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1477_F01
          Length = 158792

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 72/85 (84%)
 Strand = Plus / Plus

                                                                          
Query: 391    agcattcaccgaaaccaaatgtcatagtttctagcantgtgcgtgagctattggaatgcc 450
              |||||||||| ||||| ||||  || || ||| ||| ||||||||||||| |||||||||
Sbjct: 134960 agcattcaccaaaaccgaatgcgatggtctctggcaatgtgcgtgagctactggaatgcc 135019

                                       
Query: 451    ctgtgtgtttggttgccatgtatcc 475
              |||||||| |   ||||||||||||
Sbjct: 135020 ctgtgtgtctaaatgccatgtatcc 135044

>dbj|AK107155.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-E07, full
           insert sequence
          Length = 1521

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 72/85 (84%)
 Strand = Plus / Plus

                                                                       
Query: 391 agcattcaccgaaaccaaatgtcatagtttctagcantgtgcgtgagctattggaatgcc 450
           |||||||||| ||||| ||||  || || ||| ||| ||||||||||||| |||||||||
Sbjct: 260 agcattcaccaaaaccgaatgcgatggtctctggcaatgtgcgtgagctactggaatgcc 319

                                    
Query: 451 ctgtgtgtttggttgccatgtatcc 475
           |||||||| |   ||||||||||||
Sbjct: 320 ctgtgtgtctaaatgccatgtatcc 344

>gb|AC151407.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0073M15, complete sequence
          Length = 143071

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                          
Query: 392   gcattcaccgaaaccaaatgtcatagtttctagcantgtgcgtga 436
             ||||||||| |||||||||||  |||||||||||| |||||||||
Sbjct: 15579 gcattcaccaaaaccaaatgtggtagtttctagcagtgtgcgtga 15535

>dbj|AK058336.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-D03, full
           insert sequence
          Length = 1490

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                        
Query: 392 gcattcaccgaaaccaaatgtcatagtttctagcantgtgcgtga 436
           ||||||||| |||||||||||  |||||||||||| |||||||||
Sbjct: 327 gcattcaccaaaaccaaatgtggtagtttctagcagtgtgcgtga 371

>gb|AC005536.2| Homo sapiens BAC clone GS1-115E6 from 7, complete sequence
          Length = 165527

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 208    ccctccccaccaccctcttctc 229
              ||||||||||||||||||||||
Sbjct: 101044 ccctccccaccaccctcttctc 101023

>emb|Z98949.1|HS125H2 Human DNA sequence from clone CTA-125H2 on chromosome 22q11-12,
             complete sequence
          Length = 173513

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 286   tggtcatggcctcagctgccta 307
             ||||||||||||||||||||||
Sbjct: 19691 tggtcatggcctcagctgccta 19670

>gb|AY319304.1| Oncorhynchus mykiss neuronal-type voltage-gated calcium channel
            subunit Cav2.2 mRNA, complete cds
          Length = 7835

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 32   ccgaggaggacagagacggagc 53
            ||||||||||||||||||||||
Sbjct: 2717 ccgaggaggacagagacggagc 2738

>emb|AJ310932.1|HSA310932 Homo sapiens MYO18B gene for myosin heavy chain, exons 1-44
          Length = 288888

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 286    tggtcatggcctcagctgccta 307
              ||||||||||||||||||||||
Sbjct: 112272 tggtcatggcctcagctgccta 112251

>gb|AF461708.1| Oncorhynchus mykiss voltage-gated calcium channel subunit Cav2.2
            variant II mRNA, complete cds
          Length = 7786

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 32   ccgaggaggacagagacggagc 53
            ||||||||||||||||||||||
Sbjct: 2662 ccgaggaggacagagacggagc 2683

>gb|AF461707.1| Oncorhynchus mykiss voltage-gated calcium channel subunit Cav2.2
            variant I mRNA, complete cds
          Length = 7819

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 32   ccgaggaggacagagacggagc 53
            ||||||||||||||||||||||
Sbjct: 2695 ccgaggaggacagagacggagc 2716

>gb|AC147541.8| Pan troglodytes clone rp43-31n2, complete sequence
          Length = 39420

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 286  tggtcatggcctcagctgccta 307
            ||||||||||||||||||||||
Sbjct: 4001 tggtcatggcctcagctgccta 3980

>gb|AC155846.18| Mus musculus 6 BAC RP24-218D17 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 184853

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 142   gtaccaccccacccagcaaca 162
             |||||||||||||||||||||
Sbjct: 23966 gtaccaccccacccagcaaca 23946

>gb|AC160398.8| Mus musculus 6 BAC RP23-162K3 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 215426

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 142    gtaccaccccacccagcaaca 162
              |||||||||||||||||||||
Sbjct: 159327 gtaccaccccacccagcaaca 159307

>emb|AJ576039.1|GWE576039 Gordonia westfalica strain DSM44215T plasmid pKB1 complete genome
          Length = 101016

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 147   accccacccagcaacactccg 167
             |||||||||||||||||||||
Sbjct: 62260 accccacccagcaacactccg 62280

>gb|AC134540.3| Mus musculus BAC clone RP24-400M10 from chromosome 18, complete sequence
          Length = 189505

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 203    gccagccctccccaccaccc 222
              ||||||||||||||||||||
Sbjct: 115304 gccagccctccccaccaccc 115323

>gb|AC146547.2| Gasterosteus aculeatus clone CH213-33E5, complete sequence
          Length = 207268

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 35     aggaggacagagacggagcc 54
              ||||||||||||||||||||
Sbjct: 191272 aggaggacagagacggagcc 191253

>gb|AC068446.22| Homo sapiens chromosome 15, clone RP11-32B5, complete sequence
          Length = 158465

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 199    accagccagccctccccacc 218
              ||||||||||||||||||||
Sbjct: 138975 accagccagccctccccacc 138956

>emb|AL008716.1|HS206C7 Human DNA sequence from clone CTA-206C7 on chromosome 22q12.3-13.2,
             complete sequence
          Length = 47877

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   ccagccagccctccccacca 219
             ||||||||||||||||||||
Sbjct: 45838 ccagccagccctccccacca 45819

>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB
          Length = 1683333

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 232    cccggccgctccgatcgccg 251
              ||||||||||||||||||||
Sbjct: 300608 cccggccgctccgatcgccg 300589

>emb|AL596173.1| Listeria innocua Clip11262 complete genome, segment 11/12
          Length = 305050

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 363    gccgcaaaactcgttggtga 382
              ||||||||||||||||||||
Sbjct: 257950 gccgcaaaactcgttggtga 257931

>emb|AL591984.1| Listeria monocytogenes strain EGD, complete genome, segment 12/12
          Length = 225528

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 363   gccgcaaaactcgttggtga 382
             ||||||||||||||||||||
Sbjct: 58888 gccgcaaaactcgttggtga 58869

>gb|AC124864.3| Homo sapiens BAC clone RP11-570J4 from 4, complete sequence
          Length = 166797

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 200  ccagccagccctccccacca 219
            ||||||||||||||||||||
Sbjct: 4025 ccagccagccctccccacca 4006

>gb|AC008764.9| Homo sapiens chromosome 19 clone CTD-3222D19, complete sequence
          Length = 172562

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 448    gccctgtgtgtttggttgccatgt 471
              |||||||||||||||| |||||||
Sbjct: 133628 gccctgtgtgtttggtagccatgt 133605

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 215    caccaccctcttctccgcccggcc 238
              |||||||| |||||||||||||||
Sbjct: 354077 caccacccccttctccgcccggcc 354054

>gb|AC116622.6| Homo sapiens BAC clone RP11-312L16 from 4, complete sequence
          Length = 148850

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   ccagccagccctccccacca 219
             ||||||||||||||||||||
Sbjct: 34716 ccagccagccctccccacca 34697

>gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete genome
          Length = 2905187

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 363     gccgcaaaactcgttggtga 382
               ||||||||||||||||||||
Sbjct: 2730531 gccgcaaaactcgttggtga 2730512


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,832,922
Number of Sequences: 3902068
Number of extensions: 2832922
Number of successful extensions: 54614
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54491
Number of HSP's gapped (non-prelim): 123
length of query: 475
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 453
effective length of database: 17,147,199,772
effective search space: 7767681496716
effective search space used: 7767681496716
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)