Clone Name | bart58b08 |
---|---|
Clone Library Name | barley_pub |
>emb|AJ581529.1|HVU581529 Hordeum vulgare xi gene for xylanase inhibitor Length = 1255 Score = 761 bits (384), Expect = 0.0 Identities = 408/416 (98%) Strand = Plus / Plus Query: 43 atggcacgggtgctcctcctcgtcctggccgccacgctcgccgcgcaggcgtcgtccaag 102 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 16 atggcacgggtgctcctcctcgccctggccgccacgctcgccgcgcaggcgtcgtccaag 75 Query: 103 gcccttccggtgctcgctccggtcaccaaggacgccgccacctccctctacaaaatcccc 162 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 76 gcccttccggtgctcgctccggtcaccaaggacgccgccacctccctctacacaatcccc 135 Query: 163 ttccacgacggcaccaacctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 222 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136 ttccacgacggcgccaacctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 195 Query: 223 gacggcggccagccgccgccggcggctgacatcacctgcagcagccccacctgcctcctc 282 ||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 196 gacggcggccagcggccgccgccggctgagatcacctgcagcagccccacctgcctcctc 255 Query: 283 gccaacgcctaccccgccgcgggctgccccgcgcccagctgcggcagcgacaggcacgac 342 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 256 gccaacgcctaccccgccccgggctgccccgcgcccagctgcggcagcgacaggcacgac 315 Query: 343 aagccctgcacggcgtacccgtccaacccggtcaccggcgcgtgcgccgccgggagcctc 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 316 aagccctgcacggcgtacccgtccaacccggtcaccggcgcgtgcgccgccgggagcctc 375 Query: 403 ttccgcgcgaggctcgtggccaacaccaccgacgggaaccgcccggtgagcgcggt 458 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 376 ttccgcgcgaggctcgtggccaacatcaccgacgggaaccgcccggtgagcgcggt 431
>dbj|AB114628.1| Triticum aestivum Taxi-IV mRNA for xylanase inhibitor TAXI-IV, complete cds Length = 1387 Score = 543 bits (274), Expect = e-151 Identities = 369/401 (92%), Gaps = 6/401 (1%) Strand = Plus / Plus Query: 40 aagatggcacgggtgctcctcctcgtcctggccgccacgctcgccgcgcaggcgtcgtcc 99 ||||||||||| || ||||||||||||||||||||| ||||||| |||| |||||||||| Sbjct: 49 aagatggcacgagtcctcctcctcgtcctggccgcctcgctcgctgcgctggcgtcgtcc 108 Query: 100 aaggcccttccggtgctcgctccggtcaccaaggacgccgccacctccctctacaaaatc 159 || | |||||||||||||||||||||||||||||| |||| ||||||||||||| |||| Sbjct: 109 aaaggtcttccggtgctcgctccggtcaccaaggacaccgctacctccctctacacaatc 168 Query: 160 cccttccacgacggcaccaacctcgtcctcgacgtcgccggcccgctcgtctggtccacg 219 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 169 cccttccacgacggcgccaacctcgtcctcgacgtcgccggcccgctcgtctggtccacg 228 Query: 220 tgcgacggcggccagccgccgccggcggctgacatcacctgcagcagccccacctgcctc 279 ||||||||||||||||||||| ||| | ||| | ||||||||||||||||||||| Sbjct: 229 tgcgacggcggccagccgccggcggag------atcccgtgcagcagccccacctgcctc 282 Query: 280 ctcgccaacgcctaccccgccgcgggctgccccgcgcccagctgcggcagcgacaggcac 339 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 283 ctcgccaacgcctaccctgccccgggctgccccgcgcccagctgcggcagcgacaggcac 342 Query: 340 gacaagccctgcacggcgtacccgtccaacccggtcaccggcgcgtgcgccgccgggagc 399 |||||||| |||||||| ||||| | |||||||||||||||||||||||||||||||||| Sbjct: 343 gacaagccgtgcacggcctacccatacaacccggtcaccggcgcgtgcgccgccgggagc 402 Query: 400 ctcttccgcgcgaggctcgtggccaacaccaccgacgggaa 440 ||||||| | ||| | ||||||||||||||||||||||||| Sbjct: 403 ctcttccacacgaagttcgtggccaacaccaccgacgggaa 443
>emb|AJ697851.1| Triticum aestivum xi-IB gene for xylanase inhibitor precursor, exon 1 Length = 1206 Score = 490 bits (247), Expect = e-135 Identities = 360/398 (90%), Gaps = 6/398 (1%) Strand = Plus / Plus Query: 43 atggcacgggtgctcctcctcgtcctggccgccacgctcgccgcgcaggcgtcgtccaag 102 |||||||| || ||||||||||||||||||||| ||||||| |||| |||||||||||| Sbjct: 1 atggcacgagtcctcctcctcgtcctggccgcctcgctcgctgcgctggcgtcgtccaaa 60 Query: 103 gcccttccggtgctcgctccggtcaccaaggacgccgccacctccctctacaaaatcccc 162 | ||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||| Sbjct: 61 ggccttccggtgctcgcgccggtcaccaaggacaccgccacctccctctacaccatcccc 120 Query: 163 ttccacgacggcaccaacctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 222 |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ttccacgacggcgccagcctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 180 Query: 223 gacggcggccagccgccgccggcggctgacatcacctgcagcagccccacctgcctcctc 282 || || | ||||||||| ||| | ||| | |||||||||||||||||||||||| Sbjct: 181 gagggtagtcagccgccggcggag------atcccgtgcagcagccccacctgcctcctc 234 Query: 283 gccaacgcctaccccgccgcgggctgccccgcgcccagctgcggcagcgacaggcacgac 342 ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| Sbjct: 235 tccaacgcctaccccgccccgggctgccccgcgccaagctgcggcagcgacaggcacgac 294 Query: 343 aagccctgcacggcgtacccgtccaacccggtcaccggcgcgtgcgccgccgggagcctc 402 ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 295 aagccgtgcacggcgtacccatccaacccggtcaccggcgcgtgcgccgccgggagcctc 354 Query: 403 ttccgcgcgaggctcgtggccaacaccaccgacgggaa 440 |||| | ||| | ||| |||||||||||||||||||| Sbjct: 355 ttccacacgaagttcgcagccaacaccaccgacgggaa 392
>emb|AJ697850.1| Triticum aestivum partial xi-IIB gene for xylanase inhibitor precursor, exon 1 Length = 1170 Score = 476 bits (240), Expect = e-131 Identities = 311/335 (92%), Gaps = 6/335 (1%) Strand = Plus / Plus Query: 106 cttccggtgctcgctccggtcaccaaggacgccgccacctccctctacaaaatccccttc 165 |||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||| Sbjct: 7 cttccggtgctcgctccggtcaccaaggacaccgctacctccctctacacaatccccttc 66 Query: 166 cacgacggcaccaacctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgcgac 225 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67 cacgacggcgccaacctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgcgac 126 Query: 226 ggcggccagccgccgccggcggctgacatcacctgcagcagccccacctgcctcctcgcc 285 ||||||||||||||| ||| | ||| | ||||||||||||||||||||||||||| Sbjct: 127 ggcggccagccgccggcggag------atcccgtgcagcagccccacctgcctcctcgcc 180 Query: 286 aacgcctaccccgccgcgggctgccccgcgcccagctgcggcagcgacaggcacgacaag 345 ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 aacgcctaccctgccccgggctgccccgcgcccagctgcggcagcgacaggcacgacaag 240 Query: 346 ccctgcacggcgtacccgtccaacccggtcaccggcgcgtgcgccgccgggagcctcttc 405 || |||||||| ||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ccgtgcacggcctacccatacaacccggtcaccggcgcgtgcgccgccgggagcctcttc 300 Query: 406 cgcgcgaggctcgtggccaacaccaccgacgggaa 440 | | ||| | ||||||||||||||||||||||||| Sbjct: 301 cacacgaagttcgtggccaacaccaccgacgggaa 335
>dbj|AB178471.1| Triticum aestivum Taxi-III gene for xylanase inhibitor, complete cds, upstream region Length = 2322 Score = 472 bits (238), Expect = e-130 Identities = 360/401 (89%), Gaps = 6/401 (1%) Strand = Plus / Plus Query: 40 aagatggcacgggtgctcctcctcgtcctggccgccacgctcgccgcgcaggcgtcgtcc 99 |||||||||||||| |||||||| || ||||||||| |||||| |||| |||||||||| Sbjct: 1074 aagatggcacgggtcctcctcctggtgctggccgcctcgctcgttgcgctggcgtcgtcc 1133 Query: 100 aaggcccttccggtgctcgctccggtcaccaaggacgccgccacctccctctacaaaatc 159 || | ||||||||||||||| ||||||||||||||| |||||||||||||||||| ||| Sbjct: 1134 aaaggccttccggtgctcgcgccggtcaccaaggacaccgccacctccctctacaccatc 1193 Query: 160 cccttccacgacggcaccaacctcgtcctcgacgtcgccggcccgctcgtctggtccacg 219 ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1194 cccttccacgacggcgccagcctcgtcctcgacgtcgccggcccgctcgtctggtccacg 1253 Query: 220 tgcgacggcggccagccgccgccggcggctgacatcacctgcagcagccccacctgcctc 279 ||||| || | ||||||||| ||| | ||| | ||||||||||||||||| ||| Sbjct: 1254 tgcgagggtagtcagccgccggcggag------atcccgtgcagcagccccacctgtctc 1307 Query: 280 ctcgccaacgcctaccccgccgcgggctgccccgcgcccagctgcggcagcgacaggcac 339 ||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| Sbjct: 1308 ctctccaacgcctaccccgccccgggctgccccgcgccaagctgcggcagcgacaggcac 1367 Query: 340 gacaagccctgcacggcgtacccgtccaacccggtcaccggcgcgtgcgccgccgggagc 399 |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1368 gacaagccgtgcacggcgtacccatccaacccggtcaccggcgcgtgcgccgccgggagc 1427 Query: 400 ctcttccgcgcgaggctcgtggccaacaccaccgacgggaa 440 ||||||| | ||| | ||| |||||||||||||||||||| Sbjct: 1428 ctcttccacacgaagttcgcagccaacaccaccgacgggaa 1468
>dbj|AB114627.1| Triticum aestivum Taxi-III mRNA for xylanase inhibitor TAXI-III, complete cds Length = 1411 Score = 472 bits (238), Expect = e-130 Identities = 360/401 (89%), Gaps = 6/401 (1%) Strand = Plus / Plus Query: 40 aagatggcacgggtgctcctcctcgtcctggccgccacgctcgccgcgcaggcgtcgtcc 99 |||||||||||||| |||||||| || ||||||||| |||||| |||| |||||||||| Sbjct: 77 aagatggcacgggtcctcctcctggtgctggccgcctcgctcgttgcgctggcgtcgtcc 136 Query: 100 aaggcccttccggtgctcgctccggtcaccaaggacgccgccacctccctctacaaaatc 159 || | ||||||||||||||| ||||||||||||||| |||||||||||||||||| ||| Sbjct: 137 aaaggccttccggtgctcgcgccggtcaccaaggacaccgccacctccctctacaccatc 196 Query: 160 cccttccacgacggcaccaacctcgtcctcgacgtcgccggcccgctcgtctggtccacg 219 ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 197 cccttccacgacggcgccagcctcgtcctcgacgtcgccggcccgctcgtctggtccacg 256 Query: 220 tgcgacggcggccagccgccgccggcggctgacatcacctgcagcagccccacctgcctc 279 ||||| || | ||||||||| ||| | ||| | ||||||||||||||||| ||| Sbjct: 257 tgcgagggtagtcagccgccggcggag------atcccgtgcagcagccccacctgtctc 310 Query: 280 ctcgccaacgcctaccccgccgcgggctgccccgcgcccagctgcggcagcgacaggcac 339 ||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| Sbjct: 311 ctctccaacgcctaccccgccccgggctgccccgcgccaagctgcggcagcgacaggcac 370 Query: 340 gacaagccctgcacggcgtacccgtccaacccggtcaccggcgcgtgcgccgccgggagc 399 |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 371 gacaagccgtgcacggcgtacccatccaacccggtcaccggcgcgtgcgccgccgggagc 430 Query: 400 ctcttccgcgcgaggctcgtggccaacaccaccgacgggaa 440 ||||||| | ||| | ||| |||||||||||||||||||| Sbjct: 431 ctcttccacacgaagttcgcagccaacaccaccgacgggaa 471
>dbj|AB114626.1| Triticum aestivum taxi-I mRNA for xylanase inhibitor TAXI-I, complete cds Length = 1374 Score = 448 bits (226), Expect = e-123 Identities = 350/389 (89%), Gaps = 8/389 (2%) Strand = Plus / Plus Query: 52 gtgctcctcctcgtcctggccgccacgctcgccgcgcaggcgtcgt-ccaaggcccttcc 110 |||||||||||||||||||||||| |||||| |||| | |||||| |||| ||| |||| Sbjct: 68 gtgctcctcctcgtcctggccgcctcgctcgtggcgctgccgtcgtgccaaagcc-ttcc 126 Query: 111 ggtgctcgctccggtcaccaaggacgccgccacctccctctacaaaatccccttccacga 170 ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| Sbjct: 127 ggtgctcgctccggtcaccaaggaccccgccacctccctctacacaatccccttccacga 186 Query: 171 cggcaccaacctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgcgacggcgg 230 |||| ||| |||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 187 cggcgccagcctcgtcctcgacgtcgccggccctctcgtctggtccacgtgcgatggcgg 246 Query: 231 ccagccgccgccggcggctgacatcacctgcagcagccccacctgcctcctcgccaacgc 290 ||||||||| ||| | ||| | |||||||||||||||||||||||||||||||| Sbjct: 247 ccagccgcccgcggag------atcccgtgcagcagccccacctgcctcctcgccaacgc 300 Query: 291 ctaccccgccgcgggctgccccgcgcccagctgcggcagcgacaggcacgacaagccctg 350 |||||||||| ||||||||||||| ||||||||||||||||| | ||||||||| || || Sbjct: 301 ctaccccgccccgggctgccccgctcccagctgcggcagcgataagcacgacaaaccgtg 360 Query: 351 cacggcgtacccgtccaacccggtcaccggcgcgtgcgccgccgggagcctcttccgcgc 410 |||||||||||||| ||||||||||| ||||||||||||||| |||||||||| || | | Sbjct: 361 cacggcgtacccgtacaacccggtcagcggcgcgtgcgccgcagggagcctctcccacac 420 Query: 411 gaggctcgtggccaacaccaccgacggga 439 ||| |||||||||||||||||||||||| Sbjct: 421 gagattcgtggccaacaccaccgacggga 449
>emb|AJ438880.1|TAE438880 Triticum aestivum xiI gene for xylanase inhibitor Length = 1298 Score = 448 bits (226), Expect = e-123 Identities = 350/389 (89%), Gaps = 8/389 (2%) Strand = Plus / Plus Query: 52 gtgctcctcctcgtcctggccgccacgctcgccgcgcaggcgtcgt-ccaaggcccttcc 110 |||||||||||||||||||||||| |||||| |||| | |||||| |||| ||| |||| Sbjct: 60 gtgctcctcctcgtcctggccgcctcgctcgtggcgctgccgtcgtgccaaagcc-ttcc 118 Query: 111 ggtgctcgctccggtcaccaaggacgccgccacctccctctacaaaatccccttccacga 170 ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| Sbjct: 119 ggtgctcgctccggtcaccaaggaccccgccacctccctctacacaatccccttccacga 178 Query: 171 cggcaccaacctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgcgacggcgg 230 |||| ||| |||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 179 cggcgccagcctcgtcctcgacgtcgccggccctctcgtctggtccacgtgcgatggcgg 238 Query: 231 ccagccgccgccggcggctgacatcacctgcagcagccccacctgcctcctcgccaacgc 290 ||||||||| ||| | ||| | |||||||||||||||||||||||||||||||| Sbjct: 239 ccagccgcccgcggag------atcccgtgcagcagccccacctgcctcctcgccaacgc 292 Query: 291 ctaccccgccgcgggctgccccgcgcccagctgcggcagcgacaggcacgacaagccctg 350 |||||||||| ||||||||||||| ||||||||||||||||| | ||||||||| || || Sbjct: 293 ctaccccgccccgggctgccccgctcccagctgcggcagcgataagcacgacaaaccgtg 352 Query: 351 cacggcgtacccgtccaacccggtcaccggcgcgtgcgccgccgggagcctcttccgcgc 410 |||||||||||||| ||||||||||| ||||||||||||||| |||||||||| || | | Sbjct: 353 cacggcgtacccgtacaacccggtcagcggcgcgtgcgccgcagggagcctctcccacac 412 Query: 411 gaggctcgtggccaacaccaccgacggga 439 ||| |||||||||||||||||||||||| Sbjct: 413 gagattcgtggccaacaccaccgacggga 441
>gb|BT009260.1| Triticum aestivum clone wlk4.pk0017.d2:fis, full insert mRNA sequence Length = 1343 Score = 446 bits (225), Expect = e-122 Identities = 341/380 (89%), Gaps = 6/380 (1%) Strand = Plus / Minus Query: 58 ctcctcgtcctggccgccacgctcgccgcgcaggcgtcgtccaaggcccttccggtgctc 117 |||||||||||||||||| ||||||| |||| || ||| ||| | | |||||||||||| Sbjct: 1329 ctcctcgtcctggccgcctcgctcgctgcgctggtgtcttccgaaggtcttccggtgctc 1270 Query: 118 gctccggtcaccaaggacgccgccacctccctctacaaaatccccttccacgacggcacc 177 |||||||||||||||||| | |||||||||||||||| |||||||||||||||||| || Sbjct: 1269 gctccggtcaccaaggacacggccacctccctctacacaatccccttccacgacggagcc 1210 Query: 178 aacctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgcgacggcggccagccg 237 | ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| || Sbjct: 1209 agcctcgtcctcgacgtcgccggcctgctcgtctggtccacgtgcgagggcggccagtcg 1150 Query: 238 ccgccggcggctgacatcacctgcagcagccccacctgcctcctcgccaacgcctacccc 297 ||| ||| | ||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 1149 ccggcggag------atcgcgtgcagcagccccacctgcctcctcgccaacgcctacccc 1096 Query: 298 gccgcgggctgccccgcgcccagctgcggcagcgacaggcacgacaagccctgcacggcg 357 ||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 1095 gccccgggctgccccgcgcccacctgcggcagcgacaggcacgacaagccgtgcacggcg 1036 Query: 358 tacccgtccaacccggtcaccggcgcgtgcgccgccgggagcctcttccgcgcgaggctc 417 ||||| |||||||||||||||||||| |||||||||||||||||||||| | | ||| || Sbjct: 1035 tacccatccaacccggtcaccggcgcatgcgccgccgggagcctcttccacaccaggttc 976 Query: 418 gtggccaacaccaccgacgg 437 | ||||||||||||||||| Sbjct: 975 gcagccaacaccaccgacgg 956
>emb|AJ697849.1| Triticum aestivum partial xi-IIA gene for xylanase inhibitor precursor, exon 1 Length = 1170 Score = 438 bits (221), Expect = e-120 Identities = 304/332 (91%), Gaps = 6/332 (1%) Strand = Plus / Plus Query: 106 cttccggtgctcgctccggtcaccaaggacgccgccacctccctctacaaaatccccttc 165 |||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||| Sbjct: 7 cttccggtgctcgctccggtcaccaaggacacggccacctccctctacacaatccccttc 66 Query: 166 cacgacggcaccaacctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgcgac 225 |||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 67 cacgacggagccagcctcgtcctcgacgtcgccggcctgctcgtctggtccacgtgcgag 126 Query: 226 ggcggccagccgccgccggcggctgacatcacctgcagcagccccacctgcctcctcgcc 285 ||||||||| ||||| ||| | ||| | ||||||||||||||||||||||||||| Sbjct: 127 ggcggccagtcgccggcggag------atcgcgtgcagcagccccacctgcctcctcgcc 180 Query: 286 aacgcctaccccgccgcgggctgccccgcgcccagctgcggcagcgacaggcacgacaag 345 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 aacgcctaccccgccccgggctgccccgcgcccagctgcggcagcgacaggcacgacaag 240 Query: 346 ccctgcacggcgtacccgtccaacccggtcaccggcgcgtgcgccgccgggagcctcttc 405 || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ccgtgcacggcgtacccatccaacccggtcaccggcgcgtgcgccgccgggagcctcttc 300 Query: 406 cgcgcgaggctcgtggccaacaccaccgacgg 437 | | | ||| ||| ||||||||||||||||| Sbjct: 301 cacaccaggttcgcagccaacaccaccgacgg 332
>emb|AJ581532.1|SCE581532 Secale cereale xi-II/III gene for xylanase inhibitor Length = 1245 Score = 353 bits (178), Expect = 3e-94 Identities = 337/389 (86%), Gaps = 17/389 (4%) Strand = Plus / Plus Query: 52 gtgctcctcctcgtcctggccgccacgctcgccgcgcaggcgtcgt-ccaaggcccttcc 110 |||||||||||||||||||||||| |||||| |||| | |||||| || | ||| | || Sbjct: 18 gtgctcctcctcgtcctggccgcctcgctcgtggcgctgccgtcgtgccgaagcc-tgcc 76 Query: 111 ggtgctcgctccggtcaccaaggacgccgccacctccctctacaaaatccccttccacga 170 ||||| |||||||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct: 77 ggtgcaagctccggtcaccaaggaccccgccacctccctctacaccatccccttccacga 136 Query: 171 cggcaccaacctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgcgacggcgg 230 |||| ||| |||||||||||||| |||||||||||||||||||||||| ||||| | ||| Sbjct: 137 cggcgccagcctcgtcctcgacgccgccggcccgctcgtctggtccacctgcgaggccgg 196 Query: 231 ccagccgccgccggcggctgacatcacctgcagcagccccacctgcctcctcgccaacgc 290 |||||||||| ||| | ||| | ||| |||||||||||||||||||||||||||| Sbjct: 197 ccagccgccggcgggg------atcccgtgcggcagccccacctgcctcctcgccaacgc 250 Query: 291 ctaccccgccgcgggctgccccgcgcccagctgcggcagcgacaggcacgacaagccctg 350 |||||||||| |||||||||||||||||| |||||||||||| ||||||||| Sbjct: 251 ctaccccgccccgggctgccccgcgcccacctgcggcagcga---------caagccctg 301 Query: 351 cacggcgtacccgtccaacccggtcaccggcgcgtgcgccgccgggagcctcttccgcgc 410 |||||||| ||| |||||||||||||||||||| |||||||||||||||||||||| | | Sbjct: 302 cacggcgttcccatccaacccggtcaccggcgcctgcgccgccgggagcctcttccacac 361 Query: 411 gaggctcgtggccaacaccaccgacggga 439 || |||| ||||||||||||||||||| Sbjct: 362 cagcttcgtcgccaacaccaccgacggga 390
>dbj|AK073591.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051M04, full insert sequence Length = 1520 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 181 ctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 222 |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 204 ctcgtcctcgacctcgccggcccgctcgtctggtccacgtgc 245
>ref|NM_190072.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1260 Score = 69.9 bits (35), Expect = 7e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 177 caacctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgcg 223 |||||||||| ||||| |||||||||||||||||||||| ||||||| Sbjct: 177 caacctcgtcgtcgacctcgccggcccgctcgtctggtcgacgtgcg 223 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 349 tgcacggcgtacccgtccaacccggtcaccggcgcgtgcgccgccgggagcctcttccgc 408 |||||||||||||||| ||||||||| ||||| |||||||||||||| ||| || | Sbjct: 343 tgcacggcgtacccgtacaacccggtgaccgggcagtgcgccgccgggaaccttgcccac 402 Query: 409 gcgaggctcgtggccaacaccaccgacgg 437 ||||| || | ||||||||||||||||| Sbjct: 403 acgaggttcatcgccaacaccaccgacgg 431
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 69.9 bits (35), Expect = 7e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 177 caacctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgcg 223 |||||||||| ||||| |||||||||||||||||||||| ||||||| Sbjct: 41135587 caacctcgtcgtcgacctcgccggcccgctcgtctggtcgacgtgcg 41135541 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 349 tgcacggcgtacccgtccaacccggtcaccggcgcgtgcgccgccgggagcctcttccgc 408 |||||||||||||||| ||||||||| ||||| |||||||||||||| ||| || | Sbjct: 41135421 tgcacggcgtacccgtacaacccggtgaccgggcagtgcgccgccgggaaccttgcccac 41135362 Query: 409 gcgaggctcgtggccaacaccaccgacgg 437 ||||| || | ||||||||||||||||| Sbjct: 41135361 acgaggttcatcgccaacaccaccgacgg 41135333 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 180 cctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 222 ||||||||||||| ||| |||||||||| ||||||| |||||| Sbjct: 41120013 cctcgtcctcgacctcggcggcccgctcctctggtcgacgtgc 41119971 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 181 ctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 222 |||||| ||||| |||||||| ||||||||||||| |||||| Sbjct: 41162100 ctcgtcgtcgacctcgccggcacgctcgtctggtcgacgtgc 41162141 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 181 ctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 222 |||||| ||||| |||||||| ||||||||||||| |||||| Sbjct: 41158840 ctcgtcgtcgacctcgccggcgcgctcgtctggtcgacgtgc 41158881 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 181 ctcgtcctcgacgtcgccggcccgctcgtctgg 213 |||||||||||| |||||||| ||||||||||| Sbjct: 41132817 ctcgtcctcgacctcgccggcgcgctcgtctgg 41132785 Score = 44.1 bits (22), Expect = 0.40 Identities = 37/42 (88%) Strand = Plus / Plus Query: 181 ctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 222 |||||| ||||| |||||||| | ||||||||||| |||||| Sbjct: 41168921 ctcgtcgtcgacctcgccggcgctctcgtctggtcgacgtgc 41168962 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 359 acccgtccaacccggtcaccggcgcgtgc 387 |||||| ||||||||||||||||| |||| Sbjct: 41162284 acccgttcaacccggtcaccggcgagtgc 41162312 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 cgtcctcgacgtcgccggcc 202 |||||||||||||||||||| Sbjct: 34981754 cgtcctcgacgtcgccggcc 34981773
>dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0504E02 Length = 137468 Score = 69.9 bits (35), Expect = 7e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 177 caacctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgcg 223 |||||||||| ||||| |||||||||||||||||||||| ||||||| Sbjct: 32642 caacctcgtcgtcgacctcgccggcccgctcgtctggtcgacgtgcg 32596 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 349 tgcacggcgtacccgtccaacccggtcaccggcgcgtgcgccgccgggagcctcttccgc 408 |||||||||||||||| ||||||||| ||||| |||||||||||||| ||| || | Sbjct: 32476 tgcacggcgtacccgtacaacccggtgaccgggcagtgcgccgccgggaaccttgcccac 32417 Query: 409 gcgaggctcgtggccaacaccaccgacgg 437 ||||| || | ||||||||||||||||| Sbjct: 32416 acgaggttcatcgccaacaccaccgacgg 32388 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 180 cctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 222 ||||||||||||| ||| |||||||||| ||||||| |||||| Sbjct: 17068 cctcgtcctcgacctcggcggcccgctcctctggtcgacgtgc 17026 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 181 ctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 222 |||||| ||||| |||||||| ||||||||||||| |||||| Sbjct: 59155 ctcgtcgtcgacctcgccggcacgctcgtctggtcgacgtgc 59196 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 181 ctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 222 |||||| ||||| |||||||| ||||||||||||| |||||| Sbjct: 55895 ctcgtcgtcgacctcgccggcgcgctcgtctggtcgacgtgc 55936 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 181 ctcgtcctcgacgtcgccggcccgctcgtctgg 213 |||||||||||| |||||||| ||||||||||| Sbjct: 29872 ctcgtcctcgacctcgccggcgcgctcgtctgg 29840 Score = 44.1 bits (22), Expect = 0.40 Identities = 37/42 (88%) Strand = Plus / Plus Query: 181 ctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 222 |||||| ||||| |||||||| | ||||||||||| |||||| Sbjct: 65976 ctcgtcgtcgacctcgccggcgctctcgtctggtcgacgtgc 66017 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 359 acccgtccaacccggtcaccggcgcgtgc 387 |||||| ||||||||||||||||| |||| Sbjct: 59339 acccgttcaacccggtcaccggcgagtgc 59367
>dbj|AK105806.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-B07, full insert sequence Length = 1404 Score = 69.9 bits (35), Expect = 7e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 177 caacctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgcg 223 |||||||||| ||||| |||||||||||||||||||||| ||||||| Sbjct: 189 caacctcgtcgtcgacctcgccggcccgctcgtctggtcgacgtgcg 235 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 349 tgcacggcgtacccgtccaacccggtcaccggcgcgtgcgccgccgggagcctcttccgc 408 |||||||||||||||| ||||||||| ||||| |||||||||||||| ||| || | Sbjct: 355 tgcacggcgtacccgtacaacccggtgaccgggcagtgcgccgccgggaaccttgcccac 414 Query: 409 gcgaggctcgtggccaacaccaccgacgg 437 ||||| || | ||||||||||||||||| Sbjct: 415 acgaggttcatcgccaacaccaccgacgg 443
>ref|NM_190067.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1305 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 180 cctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 222 ||||||||||||| ||| |||||||||| ||||||| |||||| Sbjct: 171 cctcgtcctcgacctcggcggcccgctcctctggtcgacgtgc 213
>ref|NM_190076.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1329 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 181 ctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 222 |||||| ||||| |||||||| ||||||||||||| |||||| Sbjct: 178 ctcgtcgtcgacctcgccggcacgctcgtctggtcgacgtgc 219 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 359 acccgtccaacccggtcaccggcgcgtgc 387 |||||| ||||||||||||||||| |||| Sbjct: 362 acccgttcaacccggtcaccggcgagtgc 390
>ref|NM_190075.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1332 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 181 ctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 222 |||||| ||||| |||||||| ||||||||||||| |||||| Sbjct: 175 ctcgtcgtcgacctcgccggcgcgctcgtctggtcgacgtgc 216
>dbj|AK108977.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-E08, full insert sequence Length = 1601 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 181 ctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 222 |||||| ||||| |||||||| ||||||||||||| |||||| Sbjct: 247 ctcgtcgtcgacctcgccggcgcgctcgtctggtcgacgtgc 288
>dbj|AK064091.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-D09, full insert sequence Length = 1478 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 181 ctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 222 |||||| ||||| |||||||| ||||||||||||| |||||| Sbjct: 217 ctcgtcgtcgacctcgccggcacgctcgtctggtcgacgtgc 258 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 359 acccgtccaacccggtcaccggcgcgtgc 387 |||||| ||||||||||||||||| |||| Sbjct: 401 acccgttcaacccggtcaccggcgagtgc 429
>ref|NM_190071.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1275 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 181 ctcgtcctcgacgtcgccggcccgctcgtctgg 213 |||||||||||| |||||||| ||||||||||| Sbjct: 172 ctcgtcctcgacctcgccggcgcgctcgtctgg 204
>gb|AY106084.1| Zea mays PCO072275 mRNA sequence Length = 1307 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 124 gtcaccaaggacgccgccacctccctctaca 154 |||||||||||||| ||||||||||||||| Sbjct: 164 gtcaccaaggacgcgtccacctccctctaca 194
>ref|NM_190078.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1305 Score = 44.1 bits (22), Expect = 0.40 Identities = 37/42 (88%) Strand = Plus / Plus Query: 181 ctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 222 |||||| ||||| |||||||| | ||||||||||| |||||| Sbjct: 172 ctcgtcgtcgacctcgccggcgctctcgtctggtcgacgtgc 213
>gb|AE012496.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 404 of 460 of the complete genome Length = 12103 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 67 ctggccgccacgctcgccgcgcaggc 92 ||||||||||||||| |||||||||| Sbjct: 8310 ctggccgccacgctcaccgcgcaggc 8335
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 67 ctggccgccacgctcgccgcgcaggc 92 ||||||||||||||| |||||||||| Sbjct: 4523744 ctggccgccacgctcaccgcgcaggc 4523769
>dbj|AK063356.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-C06, full insert sequence Length = 1372 Score = 44.1 bits (22), Expect = 0.40 Identities = 37/42 (88%) Strand = Plus / Plus Query: 181 ctcgtcctcgacgtcgccggcccgctcgtctggtccacgtgc 222 |||||| ||||| ||||||||||||| ||||||| |||||| Sbjct: 198 ctcgtcgtcgacctcgccggcccgctgctctggtcgacgtgc 239
>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome Length = 3481691 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 322 tgcggcagcgacaggcacgac 342 ||||||||||||||||||||| Sbjct: 3436747 tgcggcagcgacaggcacgac 3436727
>emb|AL590708.18| Human DNA sequence from clone RP11-395P17 on chromosome 9 Contains the PCSCL gene for likely ortholog of rat peroxisomal Ca-dependent solute carrier-like protein (KIAA1896), the PTGES2 gene for prostaglandin E synthase 2 (GBF1, GBF-1, C9orf15, FLJ14038), the LCN2 gene for lipocalin 2 (oncogene 24p3) (NGAL), the C9orf16 gene for chromosome 9 open reading frame 16 (MGC4639, EST00098, FLJ12823), the CIZ1 gene for Cip1-interacting zinc finger protein (LSFR1), the DNM1 gene for dynamin 1 (DNM), the GOLGA2 gene for golgi autoantigen, golgin subfamily a, 2 (GM130, MGC20672), the gene for a novel protein and seven CpG islands, complete sequence Length = 194056 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 acccgtccaacccggtcaccg 379 ||||||||||||||||||||| Sbjct: 92566 acccgtccaacccggtcaccg 92586
>emb|AL355500.20| Human DNA sequence from clone RP11-540N6 on chromosome 10 Contains a novel gene, complete sequence Length = 114694 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 262 agcagccccacctgcctcctc 282 ||||||||||||||||||||| Sbjct: 101609 agcagccccacctgcctcctc 101589
>gb|AC048337.28| Homo sapiens 12 BAC RP11-711D18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 107515 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 143 cctccctctacaaaatcccct 163 ||||||||||||||||||||| Sbjct: 72368 cctccctctacaaaatcccct 72348
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 75 cacgctcgccgcgcaggcgtcgtcc 99 ||||||| ||||||||||||||||| Sbjct: 406648 cacgctcaccgcgcaggcgtcgtcc 406672
>emb|X86780.1|SHGCPIR S.hygroscopicus gene cluster for polyketide immunosuppressant rapamycin Length = 107379 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 acccggtcaccggcgcgtgcg 388 ||||||||||||||||||||| Sbjct: 96007 acccggtcaccggcgcgtgcg 95987
>gb|AF053745.1|AF053745 Mus dunni endogenous virus complete genome Length = 8655 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 cacctgcagcagccccacctg 275 ||||||||||||||||||||| Sbjct: 1170 cacctgcagcagccccacctg 1190
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence Length = 1395069 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 221 gcgacggcggccagccgccgccgg 244 |||||||||||||||||| ||||| Sbjct: 403229 gcgacggcggccagccgctgccgg 403252
>ref|XM_472429.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2634 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 425 acaccaccgacgggaaccgcccgg 448 |||||||||| ||||||||||||| Sbjct: 1319 acaccaccgatgggaaccgcccgg 1342
>ref|NM_197079.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0029C15.21), mRNA Length = 816 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 agccgccgccggcggctgac 252 |||||||||||||||||||| Sbjct: 704 agccgccgccggcggctgac 723
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 ggccgccacgctcgccgcgc 88 |||||||||||||||||||| Sbjct: 2839799 ggccgccacgctcgccgcgc 2839818
>ref|NM_190344.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1203 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 cgtcctcgacgtcgccggcc 202 |||||||||||||||||||| Sbjct: 383 cgtcctcgacgtcgccggcc 402
>gb|BT017726.1| Zea mays clone EL01N0447F12.c mRNA sequence Length = 601 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 ggccgccacgctcgccgcgcaggc 92 |||||||| ||||||||||||||| Sbjct: 471 ggccgccaagctcgccgcgcaggc 448
>gb|AC129717.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0079H23, complete sequence Length = 191765 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 cccgcgcccagctgcggcag 329 |||||||||||||||||||| Sbjct: 163436 cccgcgcccagctgcggcag 163417
>ref|XM_593633.2| PREDICTED: Bos taurus similar to Heat shock 70 kDa protein 12B (LOC515590), mRNA Length = 2875 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 tgcagcagccccacctgcct 278 |||||||||||||||||||| Sbjct: 2822 tgcagcagccccacctgcct 2841
>gb|AC093956.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1263_E10, complete sequence Length = 116469 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 cccgcgcccagctgcggcag 329 |||||||||||||||||||| Sbjct: 925 cccgcgcccagctgcggcag 906
>gb|DQ249341.1| Streptomyces hygroscopicus subsp. duamyceticus strain JCM4427 geldanamycin biosynthesis gene cluster, partial sequence Length = 75920 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 cggcggccagccgccgccgg 244 |||||||||||||||||||| Sbjct: 17998 cggcggccagccgccgccgg 17979
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 55 ctcctcctcgtcctggccgccacgctcgccgc 86 ||||||||| ||||||||||||| ||||||| Sbjct: 4523114 ctcctcctcctcctggccgccaccgtcgccgc 4523145
>ref|XM_845198.1| PREDICTED: Canis familiaris similar to Platelet glycoprotein Ib beta chain precursor (GP-Ib beta) (GPIbB) (GPIb-beta) (LOC608234), mRNA Length = 618 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 gccgcgggctgccccgcgcc 317 |||||||||||||||||||| Sbjct: 76 gccgcgggctgccccgcgcc 95
>ref|XM_861107.1| PREDICTED: Canis familiaris similar to cadherin EGF LAG seven-pass G-type receptor 2, transcript variant 8 (LOC479916), mRNA Length = 8826 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 gcagccccacctgcctcctc 282 |||||||||||||||||||| Sbjct: 5394 gcagccccacctgcctcctc 5413
>ref|XM_861094.1| PREDICTED: Canis familiaris similar to cadherin EGF LAG seven-pass G-type receptor 2, transcript variant 7 (LOC479916), mRNA Length = 8985 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 gcagccccacctgcctcctc 282 |||||||||||||||||||| Sbjct: 5394 gcagccccacctgcctcctc 5413
>ref|XM_861079.1| PREDICTED: Canis familiaris similar to cadherin EGF LAG seven-pass G-type receptor 2, transcript variant 6 (LOC479916), mRNA Length = 9000 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 gcagccccacctgcctcctc 282 |||||||||||||||||||| Sbjct: 5394 gcagccccacctgcctcctc 5413
>ref|XM_861068.1| PREDICTED: Canis familiaris similar to cadherin EGF LAG seven-pass G-type receptor 2, transcript variant 5 (LOC479916), mRNA Length = 9036 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 gcagccccacctgcctcctc 282 |||||||||||||||||||| Sbjct: 5394 gcagccccacctgcctcctc 5413
>ref|XM_861056.1| PREDICTED: Canis familiaris similar to cadherin EGF LAG seven-pass G-type receptor 2, transcript variant 4 (LOC479916), mRNA Length = 8844 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 gcagccccacctgcctcctc 282 |||||||||||||||||||| Sbjct: 5268 gcagccccacctgcctcctc 5287
>ref|XM_861040.1| PREDICTED: Canis familiaris similar to cadherin EGF LAG seven-pass G-type receptor 2, transcript variant 3 (LOC479916), mRNA Length = 8628 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 gcagccccacctgcctcctc 282 |||||||||||||||||||| Sbjct: 5052 gcagccccacctgcctcctc 5071
>ref|XM_537042.2| PREDICTED: Canis familiaris similar to cadherin EGF LAG seven-pass G-type receptor 2, transcript variant 1 (LOC479916), mRNA Length = 10534 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 gcagccccacctgcctcctc 282 |||||||||||||||||||| Sbjct: 5807 gcagccccacctgcctcctc 5826
>gb|AY947889.1| Streptomyces hygroscopicus strain AM 3672 herbimycin polyketide biosynthetic gene cluster, complete sequence Length = 86941 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 cggcggccagccgccgccgg 244 |||||||||||||||||||| Sbjct: 30638 cggcggccagccgccgccgg 30619
>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29 Length = 300100 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 cggccagccgccgccggcgg 247 |||||||||||||||||||| Sbjct: 114956 cggccagccgccgccggcgg 114975
>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29 Length = 309050 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 ccgcgcccagctgcggcagc 330 |||||||||||||||||||| Sbjct: 296990 ccgcgcccagctgcggcagc 297009
>emb|AL606598.3|OSJN00036 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G16, complete sequence Length = 114051 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 425 acaccaccgacgggaaccgcccgg 448 |||||||||| ||||||||||||| Sbjct: 12938 acaccaccgatgggaaccgcccgg 12961
>emb|AL606453.2|OSJN00010 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ991214_12, complete sequence Length = 116952 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 425 acaccaccgacgggaaccgcccgg 448 |||||||||| ||||||||||||| Sbjct: 89232 acaccaccgatgggaaccgcccgg 89255
>dbj|D14281.1|STMPSN22 Streptomyces flavovirens plasmid pSN22 DNA, complete sequence Length = 10992 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcctcctcgtcctggccgcc 75 |||||||||||||||||||| Sbjct: 7000 tcctcctcgtcctggccgcc 7019
>gb|AC087182.12| Oryza sativa chromosome 10 BAC OSJNBa0029C15 genomic sequence, complete sequence Length = 148816 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 agccgccgccggcggctgac 252 |||||||||||||||||||| Sbjct: 64791 agccgccgccggcggctgac 64810
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 425 acaccaccgacgggaaccgcccgg 448 |||||||||| ||||||||||||| Sbjct: 20578604 acaccaccgatgggaaccgcccgg 20578627
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 agccgccgccggcggctgac 252 |||||||||||||||||||| Sbjct: 17867250 agccgccgccggcggctgac 17867231
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 cccgcgcccagctgcggcag 329 |||||||||||||||||||| Sbjct: 27288468 cccgcgcccagctgcggcag 27288449
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 55 ctcctcctcgtcctggccgccacgctcgccgc 86 ||||||||| ||||||||||||| ||||||| Sbjct: 4523229 ctcctcctcctcctggccgccaccgtcgccgc 4523260
>gb|AY860818.1| Chlamydomonas reinhardtii putative chloroplast lycopene beta cyclase precursor (LCYB) mRNA, complete cds; nuclear gene for chloroplast product Length = 3272 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 cagctgcggcagcgacaggc 337 |||||||||||||||||||| Sbjct: 1586 cagctgcggcagcgacaggc 1567
>gb|AC125471.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0042J17, complete sequence Length = 171442 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 55 ctcctcctcgtcctggccgccacgctcgccgc 86 ||||||||| ||||||||||||| ||||||| Sbjct: 128406 ctcctcctcctcctggccgccaccgtcgccgc 128437
>dbj|AP001724.1| Homo sapiens genomic DNA, chromosome 21q, section 68/105 Length = 340000 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 cagcagccccacctgcctcc 280 |||||||||||||||||||| Sbjct: 259735 cagcagccccacctgcctcc 259754
>gb|AY179507.1| Streptomyces hygroscopicus strain NRRL 3602 geldanamycin biosynthesis gene cluster, partial sequence Length = 69644 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 cggcggccagccgccgccgg 244 |||||||||||||||||||| Sbjct: 10214 cggcggccagccgccgccgg 10195
>gb|AF294393.1|AF294393 Rattus norvegicus glycerol-3-phosphate dehydrogenase gene, promoters A and B and exons 1a and 1b; nuclear gene for mitochondrial product Length = 13425 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 144 ctccctctacaaaatccccttcca 167 |||||||||||||| ||||||||| Sbjct: 12351 ctccctctacaaaagccccttcca 12328
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 cgccacgctcgccgcgcagg 91 |||||||||||||||||||| Sbjct: 4971672 cgccacgctcgccgcgcagg 4971653 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 cgccgcgcaggcgtcgtcca 100 |||||||||||||||||||| Sbjct: 3937335 cgccgcgcaggcgtcgtcca 3937316 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 60 cctcgtcctggccgccacgctcgccgcg 87 ||||| |||||||||| ||||||||||| Sbjct: 3521122 cctcgccctggccgccgcgctcgccgcg 3521095
>dbj|AP003302.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0703B11 Length = 144074 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 cgtcctcgacgtcgccggcc 202 |||||||||||||||||||| Sbjct: 25982 cgtcctcgacgtcgccggcc 26001
>dbj|AB122090.1| Oryza sativa (japonica cultivar-group) Radc1 gene for Radc1, complete cds Length = 3000 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 55 ctcctcctcgtcctggccgccacgctcgccgc 86 ||||||||| ||||||||||||| ||||||| Sbjct: 1286 ctcctcctcctcctggccgccaccgtcgccgc 1317
>dbj|BS000201.1| Pan troglodytes chromosome 22 clone:PTB-047A24, map 22, complete sequences Length = 165662 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 cagcagccccacctgcctcc 280 |||||||||||||||||||| Sbjct: 18194 cagcagccccacctgcctcc 18213
>emb|Y17270.1|SVI17270 Streptomyces viridochromogenes acnA and murA (partial) genes Length = 4020 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 cccgtccaacccggtcaccg 379 |||||||||||||||||||| Sbjct: 2512 cccgtccaacccggtcaccg 2531
>dbj|AK120050.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000A21, full insert sequence Length = 1693 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 55 ctcctcctcgtcctggccgccacgctcgccgc 86 ||||||||| ||||||||||||| ||||||| Sbjct: 81 ctcctcctcctcctggccgccaccgtcgccgc 112
>dbj|AK109870.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-A10, full insert sequence Length = 2048 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 425 acaccaccgacgggaaccgcccgg 448 |||||||||| ||||||||||||| Sbjct: 515 acaccaccgatgggaaccgcccgg 538
>dbj|AK102095.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033083E22, full insert sequence Length = 2403 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 cccgcgcccagctgcggcag 329 |||||||||||||||||||| Sbjct: 361 cccgcgcccagctgcggcag 380
>dbj|AK062232.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-D08, full insert sequence Length = 1742 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 55 ctcctcctcgtcctggccgccacgctcgccgc 86 ||||||||| ||||||||||||| ||||||| Sbjct: 92 ctcctcctcctcctggccgccaccgtcgccgc 123
>gb|AY103667.1| Zea mays PCO151039 mRNA sequence Length = 771 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 ggccgccacgctcgccgcgcaggc 92 |||||||| ||||||||||||||| Sbjct: 140 ggccgccaagctcgccgcgcaggc 163
>gb|DQ065771.1| Polyangium cellulosum hypothetical protein gene, complete cds; chivosazol biosynthetic gene cluster, complete sequence; and hypothetical protein gene, complete cds Length = 96547 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 ccggcgcgtgcgccgccggg 396 |||||||||||||||||||| Sbjct: 82977 ccggcgcgtgcgccgccggg 82958
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 agccgccgccggcggctgac 252 |||||||||||||||||||| Sbjct: 17876503 agccgccgccggcggctgac 17876484
>dbj|AP000688.1| Homo sapiens genomic DNA, chromosome 21q22.2, PAC clone:P27A22, CBR1-HLCS region Length = 171703 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 cagcagccccacctgcctcc 280 |||||||||||||||||||| Sbjct: 74921 cagcagccccacctgcctcc 74940
>dbj|AB003151.1| Homo sapiens DNA, chromosome 21q22.2, PAC clone 25P16 complete sequence, encoding carbonyl reductase and carbonyl reductase 3 (complete cds) Length = 170529 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 cagcagccccacctgcctcc 280 |||||||||||||||||||| Sbjct: 9743 cagcagccccacctgcctcc 9762 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,279,521 Number of Sequences: 3902068 Number of extensions: 3279521 Number of successful extensions: 83307 Number of sequences better than 10.0: 83 Number of HSP's better than 10.0 without gapping: 84 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 81442 Number of HSP's gapped (non-prelim): 1858 length of query: 458 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 436 effective length of database: 17,147,199,772 effective search space: 7476179100592 effective search space used: 7476179100592 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)