ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart58b02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF326500.1|AF326500 Zea mays tonoplast membrane integral protein ZmTIP1-2 mRNA, complete cds Length = 1021 Score = 178 bits (90), Expect = 7e-42 Identities = 207/246 (84%) Strand = Plus / Plus Query: 84 aatgccggtgagcaggatcgccatcggcgccccgggggagctgtcccacccggacacctt 143 |||||| ||||||||||||||| | || || ||||| |||||||||||||| |||||| Sbjct: 14 aatgcctgtgagcaggatcgccgtgggtgctccgggcgagctgtcccaccccgacaccgc 73 Query: 144 ccgcgccggcgtcgccgagttcatatccatgctcatcttcgtcttcgccggctccggatc 203 | |||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||| Sbjct: 74 caaggccgccgtcgccgagttcatctccacgctcatcttcgtcttcgccggctcaggatc 133 Query: 204 cggcatggccttcggcaagctgactgacggcggcgcggcgacacccgacgggctgatctc 263 || ||||||||| | ||||| || ||||| ||||| || || || | ||| || ||| | Sbjct: 134 ggggatggccttcagtaagctcacggacggtggcgccgccactcctgccggcctcatcgc 193 Query: 264 cgcggccctggcgcacgcgttcgcgcttttcgtggccgtctccgtgggcgccaacatctc 323 |||| | ||||||||||| |||| || |||||||||||||||||||| ||||||||||| Sbjct: 194 cgcgtctctggcgcacgccctcgccctcttcgtggccgtctccgtgggtgccaacatctc 253 Query: 324 cagcgg 329 | |||| Sbjct: 254 cggcgg 259
>dbj|AK111768.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023066H10, full insert sequence Length = 1346 Score = 176 bits (89), Expect = 3e-41 Identities = 209/249 (83%) Strand = Plus / Plus Query: 81 gaaaatgccggtgagcaggatcgccatcggcgccccgggggagctgtcccacccggacac 140 |||||||||||||||| ||||||| | |||||||| || |||||||||||||||||||| Sbjct: 21 gaaaatgccggtgagccggatcgcggtgggcgcccccggcgagctgtcccacccggacac 80 Query: 141 cttccgcgccggcgtcgccgagttcatatccatgctcatcttcgtcttcgccggctccgg 200 | |||| ||||||||||||||| || ||||||||||||||||||||||| || || Sbjct: 81 ggccaaggccgccgtcgccgagttcatctctatgctcatcttcgtcttcgccggatcggg 140 Query: 201 atccggcatggccttcggcaagctgactgacggcggcgcggcgacacccgacgggctgat 260 |||||||||||||||| |||||||||| |||||||||| |||| || |||||||| Sbjct: 141 atccggcatggccttcagcaagctgacggacggcggcggcacgacgccgtcggggctgat 200 Query: 261 ctccgcggccctggcgcacgcgttcgcgcttttcgtggccgtctccgtgggcgccaacat 320 | |||| |||||||||||||| | || || |||||||| || | ||||| |||||||| Sbjct: 201 cgccgcctccctggcgcacgcgctggccctgttcgtggcggtggcggtgggagccaacat 260 Query: 321 ctccagcgg 329 |||| |||| Sbjct: 261 ctccggcgg 269
>dbj|AK111747.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050B20, full insert sequence Length = 1149 Score = 176 bits (89), Expect = 3e-41 Identities = 209/249 (83%) Strand = Plus / Plus Query: 81 gaaaatgccggtgagcaggatcgccatcggcgccccgggggagctgtcccacccggacac 140 |||||||||||||||| ||||||| | |||||||| || |||||||||||||||||||| Sbjct: 70 gaaaatgccggtgagccggatcgcggtgggcgcccccggcgagctgtcccacccggacac 129 Query: 141 cttccgcgccggcgtcgccgagttcatatccatgctcatcttcgtcttcgccggctccgg 200 | |||| ||||||||||||||| || ||||||||||||||||||||||| || || Sbjct: 130 ggccaaggccgccgtcgccgagttcatctctatgctcatcttcgtcttcgccggatcggg 189 Query: 201 atccggcatggccttcggcaagctgactgacggcggcgcggcgacacccgacgggctgat 260 |||||||||||||||| |||||||||| |||||||||| |||| || |||||||| Sbjct: 190 atccggcatggccttcagcaagctgacggacggcggcggcacgacgccgtcggggctgat 249 Query: 261 ctccgcggccctggcgcacgcgttcgcgcttttcgtggccgtctccgtgggcgccaacat 320 | |||| |||||||||||||| | || || |||||||| || | ||||| |||||||| Sbjct: 250 cgccgcctccctggcgcacgcgctggccctgttcgtggcggtggcggtgggagccaacat 309 Query: 321 ctccagcgg 329 |||| |||| Sbjct: 310 ctccggcgg 318
>dbj|AB114829.1| Oryza sativa (japonica cultivar-group) OsTIP1 mRNA for tonoplast intrinsic protein, complete cds Length = 970 Score = 176 bits (89), Expect = 3e-41 Identities = 209/249 (83%) Strand = Plus / Plus Query: 81 gaaaatgccggtgagcaggatcgccatcggcgccccgggggagctgtcccacccggacac 140 |||||||||||||||| ||||||| | |||||||| || |||||||||||||||||||| Sbjct: 7 gaaaatgccggtgagccggatcgcggtgggcgcccccggcgagctgtcccacccggacac 66 Query: 141 cttccgcgccggcgtcgccgagttcatatccatgctcatcttcgtcttcgccggctccgg 200 | |||| ||||||||||||||| || ||||||||||||||||||||||| || || Sbjct: 67 ggccaaggccgccgtcgccgagttcatctctatgctcatcttcgtcttcgccggatcggg 126 Query: 201 atccggcatggccttcggcaagctgactgacggcggcgcggcgacacccgacgggctgat 260 |||||||||||||||| |||||||||| |||||||||| |||| || |||||||| Sbjct: 127 atccggcatggccttcagcaagctgacggacggcggcggcacgacgccgtcggggctgat 186 Query: 261 ctccgcggccctggcgcacgcgttcgcgcttttcgtggccgtctccgtgggcgccaacat 320 | |||| |||||||||||||| | || || |||||||| || | ||||| |||||||| Sbjct: 187 cgccgcctccctggcgcacgcgctggccctgttcgtggcggtggcggtgggagccaacat 246 Query: 321 ctccagcgg 329 |||| |||| Sbjct: 247 ctccggcgg 255
>ref|NM_189497.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 759 Score = 168 bits (85), Expect = 7e-39 Identities = 205/245 (83%) Strand = Plus / Plus Query: 85 atgccggtgagcaggatcgccatcggcgccccgggggagctgtcccacccggacaccttc 144 |||||||||||| ||||||| | |||||||| || |||||||||||||||||||| | Sbjct: 1 atgccggtgagccggatcgcggtgggcgcccccggcgagctgtcccacccggacacggcc 60 Query: 145 cgcgccggcgtcgccgagttcatatccatgctcatcttcgtcttcgccggctccggatcc 204 |||| ||||||||||||||| || ||||||||||||||||||||||| || |||||| Sbjct: 61 aaggccgccgtcgccgagttcatctctatgctcatcttcgtcttcgccggatcgggatcc 120 Query: 205 ggcatggccttcggcaagctgactgacggcggcgcggcgacacccgacgggctgatctcc 264 |||||||||||| |||||||||| |||||||||| |||| || ||||||||| || Sbjct: 121 ggcatggccttcagcaagctgacggacggcggcggcacgacgccgtcggggctgatcgcc 180 Query: 265 gcggccctggcgcacgcgttcgcgcttttcgtggccgtctccgtgggcgccaacatctcc 324 || |||||||||||||| | || || |||||||| || | ||||| |||||||||||| Sbjct: 181 gcctccctggcgcacgcgctggccctgttcgtggcggtggcggtgggagccaacatctcc 240 Query: 325 agcgg 329 |||| Sbjct: 241 ggcgg 245
>emb|X80266.1|HVGTIPP H.vulgare mRNA for gamma-TIP-like protein Length = 1020 Score = 145 bits (73), Expect = 1e-31 Identities = 145/169 (85%) Strand = Plus / Plus Query: 155 tcgccgagttcatatccatgctcatcttcgtcttcgccggctccggatccggcatggcct 214 ||||||||||||| |||| |||||||||||||||||||||| || ||||||||||||| Sbjct: 134 tcgccgagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggcct 193 Query: 215 tcggcaagctgactgacggcggcgcggcgacacccgacgggctgatctccgcggccctgg 274 || ||||||||| || ||||| |||||| || | |||||||||||| ||||| | | Sbjct: 194 tcagcaagctgagccccgacggcgtggcgacgccggccgggctgatctcggcggcgatag 253 Query: 275 cgcacgcgttcgcgcttttcgtggccgtctccgtgggcgccaacatctc 323 |||||||||||||||| |||||||| || || ||||||||||||||||| Sbjct: 254 cgcacgcgttcgcgctgttcgtggcggtgtcggtgggcgccaacatctc 302 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 80 cgaaaatgccggtgagcaggatcgcc 105 ||||||||||||| |||||||||||| Sbjct: 59 cgaaaatgccggtcagcaggatcgcc 84
>gb|U86762.1|TAU86762 Triticum aestivum gamma-type tonoplast intrinsic protein mRNA, complete cds Length = 1133 Score = 141 bits (71), Expect = 2e-30 Identities = 149/175 (85%) Strand = Plus / Plus Query: 155 tcgccgagttcatatccatgctcatcttcgtcttcgccggctccggatccggcatggcct 214 ||||||||||||| |||| |||||||||||||||||||||| || ||||||||||||| Sbjct: 165 tcgccgagttcatctccacgctcatcttcgtcttcgccggccagggctccggcatggcct 224 Query: 215 tcggcaagctgactgacggcggcgcggcgacacccgacgggctgatctccgcggccctgg 274 || ||||||||| || |||||||||||| |||| ||| || ||||| ||||| | | Sbjct: 225 tcagcaagctgagccccgacggcgcggcgacccccgccggcctcatctcggcggcgatag 284 Query: 275 cgcacgcgttcgcgcttttcgtggccgtctccgtgggcgccaacatctccagcgg 329 | ||||| |||||||| |||||||| || ||||||||||||||||||||| |||| Sbjct: 285 cccacgccttcgcgctgttcgtggcggtgtccgtgggcgccaacatctccggcgg 339 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 80 cgaaaatgccggtgagcaggatcgcc 105 ||||||||||||| |||||||||||| Sbjct: 90 cgaaaatgccggtcagcaggatcgcc 115
>ref|XM_470213.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 753 Score = 137 bits (69), Expect = 3e-29 Identities = 147/173 (84%) Strand = Plus / Plus Query: 157 gccgagttcatatccatgctcatcttcgtcttcgccggctccggatccggcatggccttc 216 ||||||||||| |||| ||||||||||||||||||||| || ||||||||||||||| Sbjct: 73 gccgagttcatctccaccctcatcttcgtcttcgccggccagggctccggcatggccttc 132 Query: 217 ggcaagctgactgacggcggcgcggcgacacccgacgggctgatctccgcggccctggcg 276 |||||||||| | |||||| ||| |||| |||| |||||||||| | ||||| |||| Sbjct: 133 agcaagctgaccggcggcggagcgacgacccccgccgggctgatcgcggcggcggtggcc 192 Query: 277 cacgcgttcgcgcttttcgtggccgtctccgtgggcgccaacatctccagcgg 329 ||||| ||||| || |||||||| || ||||| ||||||||||||||| |||| Sbjct: 193 cacgccttcgccctgttcgtggcggtgtccgtcggcgccaacatctccggcgg 245
>dbj|D25534.1|RICYK333 Oryza sativa yk333 mRNA for gamma-Tip, complete cds Length = 1080 Score = 137 bits (69), Expect = 3e-29 Identities = 147/173 (84%) Strand = Plus / Plus Query: 157 gccgagttcatatccatgctcatcttcgtcttcgccggctccggatccggcatggccttc 216 ||||||||||| |||| ||||||||||||||||||||| || ||||||||||||||| Sbjct: 151 gccgagttcatctccaccctcatcttcgtcttcgccggccagggctccggcatggccttc 210 Query: 217 ggcaagctgactgacggcggcgcggcgacacccgacgggctgatctccgcggccctggcg 276 |||||||||| | |||||| ||| |||| |||| |||||||||| | ||||| |||| Sbjct: 211 agcaagctgaccggcggcggagcgacgacccccgccgggctgatcgcggcggcggtggcc 270 Query: 277 cacgcgttcgcgcttttcgtggccgtctccgtgggcgccaacatctccagcgg 329 ||||| ||||| || |||||||| || ||||| ||||||||||||||| |||| Sbjct: 271 cacgccttcgccctgttcgtggcggtgtccgtcggcgccaacatctccggcgg 323
>dbj|AK104123.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-C12, full insert sequence Length = 1034 Score = 137 bits (69), Expect = 3e-29 Identities = 147/173 (84%) Strand = Plus / Plus Query: 157 gccgagttcatatccatgctcatcttcgtcttcgccggctccggatccggcatggccttc 216 ||||||||||| |||| ||||||||||||||||||||| || ||||||||||||||| Sbjct: 160 gccgagttcatctccaccctcatcttcgtcttcgccggccagggctccggcatggccttc 219 Query: 217 ggcaagctgactgacggcggcgcggcgacacccgacgggctgatctccgcggccctggcg 276 |||||||||| | |||||| ||| |||| |||| |||||||||| | ||||| |||| Sbjct: 220 agcaagctgaccggcggcggagcgacgacccccgccgggctgatcgcggcggcggtggcc 279 Query: 277 cacgcgttcgcgcttttcgtggccgtctccgtgggcgccaacatctccagcgg 329 ||||| ||||| || |||||||| || ||||| ||||||||||||||| |||| Sbjct: 280 cacgccttcgccctgttcgtggcggtgtccgtcggcgccaacatctccggcgg 332
>dbj|AK068986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003E16, full insert sequence Length = 1082 Score = 137 bits (69), Expect = 3e-29 Identities = 147/173 (84%) Strand = Plus / Plus Query: 157 gccgagttcatatccatgctcatcttcgtcttcgccggctccggatccggcatggccttc 216 ||||||||||| |||| ||||||||||||||||||||| || ||||||||||||||| Sbjct: 162 gccgagttcatctccaccctcatcttcgtcttcgccggccagggctccggcatggccttc 221 Query: 217 ggcaagctgactgacggcggcgcggcgacacccgacgggctgatctccgcggccctggcg 276 |||||||||| | |||||| ||| |||| |||| |||||||||| | ||||| |||| Sbjct: 222 agcaagctgaccggcggcggagcgacgacccccgccgggctgatcgcggcggcggtggcc 281 Query: 277 cacgcgttcgcgcttttcgtggccgtctccgtgggcgccaacatctccagcgg 329 ||||| ||||| || |||||||| || ||||| ||||||||||||||| |||| Sbjct: 282 cacgccttcgccctgttcgtggcggtgtccgtcggcgccaacatctccggcgg 334
>dbj|AK060994.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-E02, full insert sequence Length = 870 Score = 137 bits (69), Expect = 3e-29 Identities = 147/173 (84%) Strand = Plus / Plus Query: 157 gccgagttcatatccatgctcatcttcgtcttcgccggctccggatccggcatggccttc 216 ||||||||||| |||| ||||||||||||||||||||| || ||||||||||||||| Sbjct: 158 gccgagttcatctccaccctcatcttcgtcttcgccggccagggctccggcatggccttc 217 Query: 217 ggcaagctgactgacggcggcgcggcgacacccgacgggctgatctccgcggccctggcg 276 |||||||||| | |||||| ||| |||| |||| |||||||||| | ||||| |||| Sbjct: 218 agcaagctgaccggcggcggagcgacgacccccgccgggctgatcgcggcggcggtggcc 277 Query: 277 cacgcgttcgcgcttttcgtggccgtctccgtgggcgccaacatctccagcgg 329 ||||| ||||| || |||||||| || ||||| ||||||||||||||| |||| Sbjct: 278 cacgccttcgccctgttcgtggcggtgtccgtcggcgccaacatctccggcgg 330
>dbj|AK058322.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B06, full insert sequence Length = 1055 Score = 137 bits (69), Expect = 3e-29 Identities = 147/173 (84%) Strand = Plus / Plus Query: 157 gccgagttcatatccatgctcatcttcgtcttcgccggctccggatccggcatggccttc 216 ||||||||||| |||| ||||||||||||||||||||| || ||||||||||||||| Sbjct: 158 gccgagttcatctccaccctcatcttcgtcttcgccggccagggctccggcatggccttc 217 Query: 217 ggcaagctgactgacggcggcgcggcgacacccgacgggctgatctccgcggccctggcg 276 |||||||||| | |||||| ||| |||| |||| |||||||||| | ||||| |||| Sbjct: 218 agcaagctgaccggcggcggagcgacgacccccgccgggctgatcgcggcggcggtggcc 277 Query: 277 cacgcgttcgcgcttttcgtggccgtctccgtgggcgccaacatctccagcgg 329 ||||| ||||| || |||||||| || ||||| ||||||||||||||| |||| Sbjct: 278 cacgccttcgccctgttcgtggcggtgtccgtcggcgccaacatctccggcgg 330
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 135 bits (68), Expect = 1e-28 Identities = 119/136 (87%) Strand = Plus / Minus Query: 81 gaaaatgccggtgagcaggatcgccatcggcgccccgggggagctgtcccacccggacac 140 |||||||||||||||| ||||||| | |||||||| || |||||||||||||||||||| Sbjct: 43109511 gaaaatgccggtgagccggatcgcggtgggcgcccccggcgagctgtcccacccggacac 43109452 Query: 141 cttccgcgccggcgtcgccgagttcatatccatgctcatcttcgtcttcgccggctccgg 200 | |||| ||||||||||||||| || ||||||||||||||||||||||| || || Sbjct: 43109451 ggccaaggccgccgtcgccgagttcatctctatgctcatcttcgtcttcgccggatcggg 43109392 Query: 201 atccggcatggccttc 216 |||||||||||||||| Sbjct: 43109391 atccggcatggccttc 43109376 Score = 50.1 bits (25), Expect = 0.005 Identities = 64/77 (83%) Strand = Plus / Minus Query: 253 gggctgatctccgcggccctggcgcacgcgttcgcgcttttcgtggccgtctccgtgggc 312 ||||||||| |||| |||||||||||||| | || || |||||||| || | ||||| Sbjct: 43109258 gggctgatcgccgcctccctggcgcacgcgctggccctgttcgtggcggtggcggtggga 43109199 Query: 313 gccaacatctccagcgg 329 |||||||||||| |||| Sbjct: 43109198 gccaacatctccggcgg 43109182
>dbj|AP003627.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0459B04 Length = 142475 Score = 135 bits (68), Expect = 1e-28 Identities = 119/136 (87%) Strand = Plus / Minus Query: 81 gaaaatgccggtgagcaggatcgccatcggcgccccgggggagctgtcccacccggacac 140 |||||||||||||||| ||||||| | |||||||| || |||||||||||||||||||| Sbjct: 106540 gaaaatgccggtgagccggatcgcggtgggcgcccccggcgagctgtcccacccggacac 106481 Query: 141 cttccgcgccggcgtcgccgagttcatatccatgctcatcttcgtcttcgccggctccgg 200 | |||| ||||||||||||||| || ||||||||||||||||||||||| || || Sbjct: 106480 ggccaaggccgccgtcgccgagttcatctctatgctcatcttcgtcttcgccggatcggg 106421 Query: 201 atccggcatggccttc 216 |||||||||||||||| Sbjct: 106420 atccggcatggccttc 106405 Score = 50.1 bits (25), Expect = 0.005 Identities = 64/77 (83%) Strand = Plus / Minus Query: 253 gggctgatctccgcggccctggcgcacgcgttcgcgcttttcgtggccgtctccgtgggc 312 ||||||||| |||| |||||||||||||| | || || |||||||| || | ||||| Sbjct: 106287 gggctgatcgccgcctccctggcgcacgcgctggccctgttcgtggcggtggcggtggga 106228 Query: 313 gccaacatctccagcgg 329 |||||||||||| |||| Sbjct: 106227 gccaacatctccggcgg 106211
>gb|BT016300.1| Zea mays clone Contig133 mRNA sequence Length = 1112 Score = 127 bits (64), Expect = 2e-26 Identities = 150/176 (85%), Gaps = 2/176 (1%) Strand = Plus / Plus Query: 155 tcgccgagttcatatccatgctcatcttcgtcttcgccggctccggatccggcatggcct 214 |||| |||||||| |||| ||||||||||||||||||||| || ||||||||||||| Sbjct: 168 tcgctgagttcatctccaccctcatcttcgtcttcgccggccagggctccggcatggcct 227 Query: 215 tcggcaagctgactgacggcggcgcggcgacacccgacggg-ctgatctccgcggccctg 273 || |||||||||| | ||||||| || |||| |||| |||| |||||| | ||||| || Sbjct: 228 tcagcaagctgaccggcggcggcccgacgac-cccggcgggcctgatcgcggcggcggtg 286 Query: 274 gcgcacgcgttcgcgcttttcgtggccgtctccgtgggcgccaacatctccagcgg 329 ||||||||||||||||| |||||||| || || |||||||| ||||||||| |||| Sbjct: 287 gcgcacgcgttcgcgctgttcgtggcggtgtcggtgggcgcgaacatctccggcgg 342
>gb|AY104464.1| Zea mays PCO114899 mRNA sequence Length = 1167 Score = 127 bits (64), Expect = 2e-26 Identities = 150/176 (85%), Gaps = 2/176 (1%) Strand = Plus / Plus Query: 155 tcgccgagttcatatccatgctcatcttcgtcttcgccggctccggatccggcatggcct 214 |||| |||||||| |||| ||||||||||||||||||||| || ||||||||||||| Sbjct: 167 tcgctgagttcatctccaccctcatcttcgtcttcgccggccagggctccggcatggcct 226 Query: 215 tcggcaagctgactgacggcggcgcggcgacacccgacggg-ctgatctccgcggccctg 273 || |||||||||| | ||||||| || |||| |||| |||| |||||| | ||||| || Sbjct: 227 tcagcaagctgaccggcggcggcccgacgac-cccggcgggcctgatcgcggcggcggtg 285 Query: 274 gcgcacgcgttcgcgcttttcgtggccgtctccgtgggcgccaacatctccagcgg 329 ||||||||||||||||| |||||||| || || |||||||| ||||||||| |||| Sbjct: 286 gcgcacgcgttcgcgctgttcgtggcggtgtcggtgggcgcgaacatctccggcgg 341
>gb|AF037061.1|AF037061 Zea mays tonoplast intrinsic protein (ZmTIP1) mRNA, complete cds Length = 1097 Score = 127 bits (64), Expect = 2e-26 Identities = 150/176 (85%), Gaps = 2/176 (1%) Strand = Plus / Plus Query: 155 tcgccgagttcatatccatgctcatcttcgtcttcgccggctccggatccggcatggcct 214 |||| |||||||| |||| ||||||||||||||||||||| || ||||||||||||| Sbjct: 164 tcgctgagttcatctccaccctcatcttcgtcttcgccggccagggctccggcatggcct 223 Query: 215 tcggcaagctgactgacggcggcgcggcgacacccgacggg-ctgatctccgcggccctg 273 || |||||||||| | ||||||| || |||| |||| |||| |||||| | ||||| || Sbjct: 224 tcagcaagctgaccggcggcggcccgacgac-cccggcgggcctgatcgcggcggcggtg 282 Query: 274 gcgcacgcgttcgcgcttttcgtggccgtctccgtgggcgccaacatctccagcgg 329 ||||||||||||||||| |||||||| || || |||||||| ||||||||| |||| Sbjct: 283 gcgcacgcgttcgcgctgttcgtggcggtgtctgtgggcgcgaacatctccggcgg 338
>gb|AY243803.1| Zea mays tonoplast water channel (TIP1-1) mRNA, complete cds Length = 1039 Score = 123 bits (62), Expect = 4e-25 Identities = 145/170 (85%), Gaps = 2/170 (1%) Strand = Plus / Plus Query: 155 tcgccgagttcatatccatgctcatcttcgtcttcgccggctccggatccggcatggcct 214 |||| |||||||| |||| ||||||||||||||||||||| || ||||||||||||| Sbjct: 72 tcgctgagttcatctccaccctcatcttcgtcttcgccggccagggctccggcatggcct 131 Query: 215 tcggcaagctgactgacggcggcgcggcgacacccgacggg-ctgatctccgcggccctg 273 || |||||||||| | ||||||| || |||| |||| |||| |||||| | ||||| || Sbjct: 132 tcagcaagctgaccggcggcggcccgacgac-cccggcgggcctgatcgcggcggcggtg 190 Query: 274 gcgcacgcgttcgcgcttttcgtggccgtctccgtgggcgccaacatctc 323 ||||||||||||||||| |||||||| || || |||||||| |||||||| Sbjct: 191 gcgcacgcgttcgcgctgttcgtggcggtgtcggtgggcgcgaacatctc 240
>gb|AY389618.1| Hyacinthus orientalis mitochondrial tonoplast intrinsic protein (TIP1) mRNA, partial cds Length = 662 Score = 81.8 bits (41), Expect = 1e-12 Identities = 137/169 (81%) Strand = Plus / Plus Query: 155 tcgccgagttcatatccatgctcatcttcgtcttcgccggctccggatccggcatggcct 214 ||||||||||||| |||| ||||||||||||||||||||| || |||||||| |||| Sbjct: 70 tcgccgagttcatctccaccctcatcttcgtcttcgccggccaaggctccggcatcgcct 129 Query: 215 tcggcaagctgactgacggcggcgcggcgacacccgacgggctgatctccgcggccctgg 274 || ||||||| | | |||||| | ||||| || | || ||||||||||||||||| Sbjct: 130 tcagcaagctctccggcggcgggccagcgacgccggcaggcctgatctccgcggcccttt 189 Query: 275 cgcacgcgttcgcgcttttcgtggccgtctccgtgggcgccaacatctc 323 | ||||| ||||| || ||||| || ||||| || || ||||||||||| Sbjct: 190 cccacgccttcgccctcttcgtcgctgtctcggtcggggccaacatctc 238
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 81.8 bits (41), Expect = 1e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 217 ggcaagctgactgacggcggcgcggcgacacccgacgggctgatctccgcggccctggcg 276 ||||||||||| | |||||| ||| |||| |||| |||||||||| | ||||| |||| Sbjct: 2545349 ggcaagctgaccggcggcggagcgacgacccccgccgggctgatcgcggcggcggtggcc 2545290 Query: 277 cacgcgttcgcgcttttcgtggccgtctccgtgggcgccaacatctccagcgg 329 ||||| ||||| || |||||||| || ||||| ||||||||||||||| |||| Sbjct: 2545289 cacgccttcgccctgttcgtggcggtgtccgtcggcgccaacatctccggcgg 2545237 Score = 63.9 bits (32), Expect = 3e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 157 gccgagttcatatccatgctcatcttcgtcttcgccggctccggatccggcatggccttc 216 ||||||||||| |||| ||||||||||||||||||||| || ||||||||||||||| Sbjct: 2546163 gccgagttcatctccaccctcatcttcgtcttcgccggccagggctccggcatggccttc 2546104
>gb|AC090485.3|AC090485 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0067N01, from chromosome 3, complete sequence Length = 159636 Score = 81.8 bits (41), Expect = 1e-12 Identities = 95/113 (84%) Strand = Plus / Plus Query: 217 ggcaagctgactgacggcggcgcggcgacacccgacgggctgatctccgcggccctggcg 276 ||||||||||| | |||||| ||| |||| |||| |||||||||| | ||||| |||| Sbjct: 124745 ggcaagctgaccggcggcggagcgacgacccccgccgggctgatcgcggcggcggtggcc 124804 Query: 277 cacgcgttcgcgcttttcgtggccgtctccgtgggcgccaacatctccagcgg 329 ||||| ||||| || |||||||| || ||||| ||||||||||||||| |||| Sbjct: 124805 cacgccttcgccctgttcgtggcggtgtccgtcggcgccaacatctccggcgg 124857 Score = 63.9 bits (32), Expect = 3e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 157 gccgagttcatatccatgctcatcttcgtcttcgccggctccggatccggcatggccttc 216 ||||||||||| |||| ||||||||||||||||||||| || ||||||||||||||| Sbjct: 123931 gccgagttcatctccaccctcatcttcgtcttcgccggccagggctccggcatggccttc 123990
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 81.8 bits (41), Expect = 1e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 217 ggcaagctgactgacggcggcgcggcgacacccgacgggctgatctccgcggccctggcg 276 ||||||||||| | |||||| ||| |||| |||| |||||||||| | ||||| |||| Sbjct: 2545459 ggcaagctgaccggcggcggagcgacgacccccgccgggctgatcgcggcggcggtggcc 2545400 Query: 277 cacgcgttcgcgcttttcgtggccgtctccgtgggcgccaacatctccagcgg 329 ||||| ||||| || |||||||| || ||||| ||||||||||||||| |||| Sbjct: 2545399 cacgccttcgccctgttcgtggcggtgtccgtcggcgccaacatctccggcgg 2545347 Score = 63.9 bits (32), Expect = 3e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 157 gccgagttcatatccatgctcatcttcgtcttcgccggctccggatccggcatggccttc 216 ||||||||||| |||| ||||||||||||||||||||| || ||||||||||||||| Sbjct: 2546273 gccgagttcatctccaccctcatcttcgtcttcgccggccagggctccggcatggccttc 2546214
>dbj|AK110727.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-170-E06, full insert sequence Length = 1024 Score = 81.8 bits (41), Expect = 1e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 217 ggcaagctgactgacggcggcgcggcgacacccgacgggctgatctccgcggccctggcg 276 ||||||||||| | |||||| ||| |||| |||| |||||||||| | ||||| |||| Sbjct: 758 ggcaagctgaccggcggcggagcgacgacccccgccgggctgatcgcggcggcggtggcc 699 Query: 277 cacgcgttcgcgcttttcgtggccgtctccgtgggcgccaacatctccagcgg 329 ||||| ||||| || |||||||| || ||||| ||||||||||||||| |||| Sbjct: 698 cacgccttcgccctgttcgtggcggtgtccgtcggcgccaacatctccggcgg 646
>emb|AJ242805.1|SST242805 Sporobolus stapfianus mRNA for putative gamma tonoplast intrinsic protein (TIP) Length = 1146 Score = 75.8 bits (38), Expect = 8e-11 Identities = 65/74 (87%) Strand = Plus / Plus Query: 256 ctgatctccgcggccctggcgcacgcgttcgcgcttttcgtggccgtctccgtgggcgcc 315 ||||||||||| || |||||||||| ||||| || ||||||||||| |||||| ||||| Sbjct: 251 ctgatctccgctgcggtggcgcacgccttcgccctgttcgtggccgtgtccgtgagcgcc 310 Query: 316 aacatctccagcgg 329 ||||||||| |||| Sbjct: 311 aacatctccggcgg 324 Score = 56.0 bits (28), Expect = 7e-05 Identities = 61/72 (84%) Strand = Plus / Plus Query: 155 tcgccgagttcatatccatgctcatcttcgtcttcgccggctccggatccggcatggcct 214 |||| |||||||| |||| ||||||||||||||||||||| || |||||| |||||| Sbjct: 153 tcgctgagttcatctccaccctcatcttcgtcttcgccggccagggctccggcgtggcct 212 Query: 215 tcggcaagctga 226 | ||||||||| Sbjct: 213 acagcaagctga 224
>gb|AF275315.1|AF275315 Lotus japonicus water-selective transport intrinsic membrane protein 1 mRNA, complete cds Length = 1162 Score = 75.8 bits (38), Expect = 8e-11 Identities = 125/154 (81%) Strand = Plus / Plus Query: 176 tcatcttcgtcttcgccggctccggatccggcatggccttcggcaagctgactgacggcg 235 ||||||||||||||||||||||||| ||||| || |||| | ||| || || |||| || Sbjct: 151 tcatcttcgtcttcgccggctccggttccggaatcgcctacaacaaactcaccgacgacg 210 Query: 236 gcgcggcgacacccgacgggctgatctccgcggccctggcgcacgcgttcgcgcttttcg 295 |||| || || |||| ||| || |||||||| || | || ||||| ||||| || |||| Sbjct: 211 gcgccgccacccccgccggcctcatctccgcctccatcgcccacgcattcgccctcttcg 270 Query: 296 tggccgtctccgtgggcgccaacatctccagcgg 329 | ||||||||| | |||||||||||||| |||| Sbjct: 271 tcgccgtctccatcagcgccaacatctccggcgg 304
>dbj|AB126924.1| Prunus persica Pr-gTIP1 mRNA for tonoplast intrinsic protein, complete cds Length = 1143 Score = 75.8 bits (38), Expect = 8e-11 Identities = 62/70 (88%) Strand = Plus / Plus Query: 155 tcgccgagttcatatccatgctcatcttcgtcttcgccggctccggatccggcatggcct 214 ||||||||||||| |||| ||| |||||||||||||||||| || ||||||||||||| Sbjct: 171 tcgccgagttcatctccacgctgatcttcgtcttcgccggcgagggctccggcatggcct 230 Query: 215 tcggcaagct 224 ||| |||||| Sbjct: 231 tcgccaagct 240
>dbj|AP004479.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT03H13, TM0012b, complete sequence Length = 41820 Score = 75.8 bits (38), Expect = 8e-11 Identities = 125/154 (81%) Strand = Plus / Minus Query: 176 tcatcttcgtcttcgccggctccggatccggcatggccttcggcaagctgactgacggcg 235 ||||||||||||||||||||||||| ||||| || |||| | ||| || || |||| || Sbjct: 10754 tcatcttcgtcttcgccggctccggttccggaatcgcctacaacaaactcaccgacgacg 10695 Query: 236 gcgcggcgacacccgacgggctgatctccgcggccctggcgcacgcgttcgcgcttttcg 295 |||| || || |||| ||| || |||||||| || | || ||||| ||||| || |||| Sbjct: 10694 gcgccgccacccccgccggcctcatctccgcctccatcgcccacgcattcgccctcttcg 10635 Query: 296 tggccgtctccgtgggcgccaacatctccagcgg 329 | ||||||||| | |||||||||||||| |||| Sbjct: 10634 tcgccgtctccatcagcgccaacatctccggcgg 10601
>gb|AY112388.1| Zea mays CL24208_1 mRNA sequence Length = 833 Score = 69.9 bits (35), Expect = 5e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 271 ctggcgcacgcgttcgcgcttttcgtggccgtctccgtgggcgccaacatctccagcgg 329 ||||||||||| |||| || |||||||||||||||||||| |||||||||||| |||| Sbjct: 809 ctggcgcacgccctcgccctcttcgtggccgtctccgtgggtgccaacatctccggcgg 751
>gb|AY525641.1| Triticum aestivum delta tonoplast intrinsic protein TIP2;3 mRNA, complete cds Length = 829 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 155 tcgccgagttcatatccatgctcatcttcgtcttcgccggc 195 ||||||||||||| |||| ||||||||||||||||||||| Sbjct: 119 tcgccgagttcatctccaccctcatcttcgtcttcgccggc 159 Score = 42.1 bits (21), Expect = 1.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 277 cacgcgttcgcgcttttcgtggccgtctccgtgggcgccaacatctccagcgg 329 |||| ||||| ||| ||||| || ||| |||| ||||||||||||||| |||| Sbjct: 241 cacgggttcgggctgttcgtcgcggtcgccgtcggcgccaacatctccggcgg 293
>gb|AY525639.1| Triticum aestivum delta tonoplast intrinsic protein TIP2;1 mRNA, complete cds Length = 817 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 155 tcgccgagttcatatccatgctcatcttcgtcttcgccggc 195 ||||||||||||| |||| ||||||||||||||||||||| Sbjct: 123 tcgccgagttcatctccaccctcatcttcgtcttcgccggc 163
>emb|X95650.1|TGTIP1GEN T.gesneriana mRNA for tonoplast intrinsic protein Length = 992 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 277 cacgcgttcgcgcttttcgtggccgtctccgtgggcgccaacatctccagcgg 329 ||||| ||||| |||||||| || |||||||| ||||||||||||||| |||| Sbjct: 216 cacgccttcgcccttttcgtcgctgtctccgttggcgccaacatctccggcgg 268
>emb|AJ314583.1|POC314583 Posidonia oceanica mRNA for putative tonoplast intrinsic protein (tip1 gene) Length = 1112 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 155 tcgccgagttcatatccatgctcatcttcgtcttcgccggc 195 ||||||||||||| |||| ||||||||||||||||||||| Sbjct: 150 tcgccgagttcatctccaccctcatcttcgtcttcgccggc 190
>gb|U86763.1|TAU86763 Triticum aestivum delta-type tonoplast intrinsic protein mRNA, complete cds Length = 1067 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 155 tcgccgagttcatatccatgctcatcttcgtcttcgccggc 195 ||||||||||||| |||| ||||||||||||||||||||| Sbjct: 125 tcgccgagttcatctccaccctcatcttcgtcttcgccggc 165
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 153 cgtcgccgagttcatatccatgctcatcttcgtcttcgccggc 195 ||||||||||||||| |||| ||| ||||||||||||||||| Sbjct: 13250272 cgtcgccgagttcatctccaccctcgtcttcgtcttcgccggc 13250314
>dbj|AP005449.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0427E01 Length = 146395 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 153 cgtcgccgagttcatatccatgctcatcttcgtcttcgccggc 195 ||||||||||||||| |||| ||| ||||||||||||||||| Sbjct: 12082 cgtcgccgagttcatctccaccctcgtcttcgtcttcgccggc 12124
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0012F14 Length = 168629 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 153 cgtcgccgagttcatatccatgctcatcttcgtcttcgccggc 195 ||||||||||||||| |||| ||| ||||||||||||||||| Sbjct: 167460 cgtcgccgagttcatctccaccctcgtcttcgtcttcgccggc 167502
>dbj|AK104464.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C06, full insert sequence Length = 1194 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 153 cgtcgccgagttcatatccatgctcatcttcgtcttcgccggc 195 ||||||||||||||| |||| ||| ||||||||||||||||| Sbjct: 155 cgtcgccgagttcatctccaccctcgtcttcgtcttcgccggc 197
>dbj|AK104377.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-G09, full insert sequence Length = 1196 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 153 cgtcgccgagttcatatccatgctcatcttcgtcttcgccggc 195 ||||||||||||||| |||| ||| ||||||||||||||||| Sbjct: 157 cgtcgccgagttcatctccaccctcgtcttcgtcttcgccggc 199
>dbj|AK104270.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-F03, full insert sequence Length = 1214 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 153 cgtcgccgagttcatatccatgctcatcttcgtcttcgccggc 195 ||||||||||||||| |||| ||| ||||||||||||||||| Sbjct: 157 cgtcgccgagttcatctccaccctcgtcttcgtcttcgccggc 199
>dbj|AK100193.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036J06, full insert sequence Length = 1074 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 153 cgtcgccgagttcatatccatgctcatcttcgtcttcgccggc 195 ||||||||||||||| |||| ||| ||||||||||||||||| Sbjct: 156 cgtcgccgagttcatctccaccctcgtcttcgtcttcgccggc 198
>dbj|AK099616.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050J20, full insert sequence Length = 1197 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 153 cgtcgccgagttcatatccatgctcatcttcgtcttcgccggc 195 ||||||||||||||| |||| ||| ||||||||||||||||| Sbjct: 158 cgtcgccgagttcatctccaccctcgtcttcgtcttcgccggc 200
>dbj|AK099141.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055A02, full insert sequence Length = 1195 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 153 cgtcgccgagttcatatccatgctcatcttcgtcttcgccggc 195 ||||||||||||||| |||| ||| ||||||||||||||||| Sbjct: 156 cgtcgccgagttcatctccaccctcgtcttcgtcttcgccggc 198
>dbj|AK099015.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116H02, full insert sequence Length = 1202 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 153 cgtcgccgagttcatatccatgctcatcttcgtcttcgccggc 195 ||||||||||||||| |||| ||| ||||||||||||||||| Sbjct: 158 cgtcgccgagttcatctccaccctcgtcttcgtcttcgccggc 200
>dbj|AK073531.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044F19, full insert sequence Length = 1220 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 153 cgtcgccgagttcatatccatgctcatcttcgtcttcgccggc 195 ||||||||||||||| |||| ||| ||||||||||||||||| Sbjct: 156 cgtcgccgagttcatctccaccctcgtcttcgtcttcgccggc 198
>emb|AJ133748.1|PAB133748 Picea abies mRNA for major intrinsic protein Length = 1168 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 157 gccgagttcatatccatgctcatcttcgtcttcgccggctccggatccggcatggcct 214 ||||||||| | |||| |||||||||||||||||| ||| ||||||| |||||||| Sbjct: 182 gccgagttcttctccacgctcatcttcgtcttcgctggcgaaggatccgtcatggcct 239
>gb|AY243804.1| Zea mays tonoplast water channel mRNA, complete cds Length = 968 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 280 gcgttcgcgcttttcgtggccgtctccgtgggcgccaacatctccagcgg 329 ||||||||||| ||||| | ||||||| ||| ||||||||||||| |||| Sbjct: 193 gcgttcgcgctcttcgtcggcgtctccatggccgccaacatctccggcgg 242
>gb|AF326503.1|AF326503 Zea mays tonoplast membrane integral protein ZmTIP2-3 mRNA, complete cds Length = 1042 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 280 gcgttcgcgcttttcgtggccgtctccgtgggcgccaacatctccagcgg 329 ||||||||||| ||||| | ||||||| ||| ||||||||||||| |||| Sbjct: 261 gcgttcgcgctcttcgtcggcgtctccatggccgccaacatctccggcgg 310
>gb|AY106931.1| Zea mays PCO140073 mRNA sequence Length = 1069 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 280 gcgttcgcgcttttcgtggccgtctccgtgggcgccaacatctccagcgg 329 ||||||||||| ||||| | ||||||| ||| ||||||||||||| |||| Sbjct: 270 gcgttcgcgctcttcgtcggcgtctccatggccgccaacatctccggcgg 319
>gb|AF057183.1|AF057183 Zea mays putative tonoplast aquaporin mRNA, complete cds Length = 1060 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 280 gcgttcgcgcttttcgtggccgtctccgtgggcgccaacatctccagcgg 329 ||||||||||| ||||| | ||||||| ||| ||||||||||||| |||| Sbjct: 252 gcgttcgcgctcttcgtcggcgtctccatggccgccaacatctccggcgg 301
>gb|AY525640.1| Triticum aestivum delta tonoplast intrinsic protein TIP2;2 mRNA, complete cds Length = 853 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Plus Query: 155 tcgccgagttcatatccatgctcatcttcgtcttcgccggc 195 |||| |||||||| |||| ||||||||||||||||||||| Sbjct: 122 tcgctgagttcatctccaccctcatcttcgtcttcgccggc 162
>gb|AF342809.1|AF342809 Zea mays tonoplast membrane integral protein ZmTIP3-2 mRNA, complete cds Length = 1156 Score = 48.1 bits (24), Expect = 0.018 Identities = 54/64 (84%) Strand = Plus / Plus Query: 130 cacccggacaccttccgcgccggcgtcgccgagttcatatccatgctcatcttcgtcttc 189 |||||||||||| ||||||||| | || |||||||||| ||| ||||||||||||| Sbjct: 174 cacccggacaccatccgcgccgccatctccgagttcatcgccaccgccatcttcgtcttc 233 Query: 190 gccg 193 |||| Sbjct: 234 gccg 237
>gb|AF326504.1|AF326504 Zea mays tonoplast membrane integral protein ZmTIP3-1 mRNA, complete cds Length = 989 Score = 48.1 bits (24), Expect = 0.018 Identities = 54/64 (84%) Strand = Plus / Plus Query: 130 cacccggacaccttccgcgccggcgtcgccgagttcatatccatgctcatcttcgtcttc 189 |||||||||||| ||||||||| | || |||||||||| ||| ||||||||||||| Sbjct: 111 cacccggacaccatccgcgccgccatctccgagttcatcgccaccgccatcttcgtcttc 170 Query: 190 gccg 193 |||| Sbjct: 171 gccg 174
>dbj|AB048248.1| Pyrus communis Py-gTIP mRNA for gamma tonoplast intrinsic protein, complete cds Length = 1122 Score = 48.1 bits (24), Expect = 0.018 Identities = 57/68 (83%) Strand = Plus / Plus Query: 157 gccgagttcatatccatgctcatcttcgtcttcgccggctccggatccggcatggccttc 216 ||||||||||| || | |||||||||||| ||||||||| || ||||| ||||| ||| Sbjct: 144 gccgagttcatctcgacgctcatcttcgttttcgccggcgagggctccggaatggcattc 203 Query: 217 ggcaagct 224 | |||||| Sbjct: 204 gccaagct 211 Score = 40.1 bits (20), Expect = 4.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 292 ttcgtggccgtctccgtgggcgccaacatctccagcggac 331 ||||| ||||||||| | |||||||||||||| |||||| Sbjct: 279 ttcgtcgccgtctccatcagcgccaacatctccggcggac 318
>gb|AF290619.1|AF290619 Nicotiana glauca putative gamma TIP (MIP3) mRNA, complete cds Length = 1016 Score = 46.1 bits (23), Expect = 0.071 Identities = 41/47 (87%) Strand = Plus / Plus Query: 283 ttcgcgcttttcgtggccgtctccgtgggcgccaacatctccagcgg 329 |||| ||| ||||||||||||||||| || || ||||||||| |||| Sbjct: 259 ttcgggctgttcgtggccgtctccgtcggtgctaacatctccggcgg 305
>dbj|AB206105.1| Mimosa pudica tip1;2 mRNA for tonoplast intrinsic protein 1;2, complete cds Length = 963 Score = 46.1 bits (23), Expect = 0.071 Identities = 32/35 (91%) Strand = Plus / Plus Query: 160 gagttcatatccatgctcatcttcgtcttcgccgg 194 |||||||| |||||||||||||| || |||||||| Sbjct: 129 gagttcatctccatgctcatctttgtgttcgccgg 163
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 140 ccttccgcgccggcgtcgccga 161 |||||||||||||||||||||| Sbjct: 4291662 ccttccgcgccggcgtcgccga 4291683
>gb|AF326502.1|AF326502 Zea mays tonoplast membrane integral protein ZmTIP2-2 mRNA, complete cds Length = 1073 Score = 44.1 bits (22), Expect = 0.28 Identities = 49/58 (84%) Strand = Plus / Plus Query: 272 tggcgcacgcgttcgcgcttttcgtggccgtctccgtgggcgccaacatctccagcgg 329 ||||||||||| | || || ||||||| ||||||||||| ||| |||| |||| |||| Sbjct: 249 tggcgcacgcgctggccctcttcgtgggcgtctccgtggccgcgaacacctccggcgg 306
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Minus Query: 188 tcgccggctccggatccggcatggcc 213 |||||||||||| ||||||||||||| Sbjct: 1093101 tcgccggctccgaatccggcatggcc 1093076
>ref|NM_113559.3| Arabidopsis thaliana TIP2 (TONOPLAST INTRINSIC PROTEIN 2); water channel AT3G26520 (TIP2) mRNA, complete cds Length = 1201 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 178 atcttcgtcttcgccggctccggatccgg 206 |||||||||||||||||||| || ||||| Sbjct: 209 atcttcgtcttcgccggctcaggctccgg 237
>gb|BT012976.1| Lycopersicon esculentum clone 114187R, mRNA sequence Length = 972 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 199 ggatccggcatggccttcggcaagctgac 227 ||||| |||||||||||||| |||||||| Sbjct: 166 ggatctggcatggccttcggtaagctgac 194
>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29 Length = 292100 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 85 atgccggtgagcaggatcgccatcg 109 |||||| |||||||||||||||||| Sbjct: 246330 atgccgttgagcaggatcgccatcg 246306
>emb|BX908780.7| Zebrafish DNA sequence from clone CH211-198K9 in linkage group 1, complete sequence Length = 199679 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 acacaattcaacaattcaaca 21 ||||||||||||||||||||| Sbjct: 189724 acacaattcaacaattcaaca 189744
>gb|AY079114.1| Arabidopsis thaliana AT3g26520/MFE16_3 mRNA, complete cds Length = 762 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 178 atcttcgtcttcgccggctccggatccgg 206 |||||||||||||||||||| || ||||| Sbjct: 97 atcttcgtcttcgccggctcaggctccgg 125
>gb|AF419613.1|AF419613 Arabidopsis thaliana AT3g26520/MFE16_3 mRNA, complete cds Length = 1061 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 178 atcttcgtcttcgccggctccggatccgg 206 |||||||||||||||||||| || ||||| Sbjct: 159 atcttcgtcttcgccggctcaggctccgg 187
>gb|AF428341.1|AF428341 Arabidopsis thaliana AT3g26520/MFE16_3 mRNA, complete cds Length = 1066 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 178 atcttcgtcttcgccggctccggatccgg 206 |||||||||||||||||||| || ||||| Sbjct: 164 atcttcgtcttcgccggctcaggctccgg 192
>gb|AF004393.1|AF004393 Arabidopsis thaliana salt-stress induced tonoplast intrinsic protein mRNA, complete cds Length = 1072 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 178 atcttcgtcttcgccggctccggatccgg 206 |||||||||||||||||||| || ||||| Sbjct: 111 atcttcgtcttcgccggctcaggctccgg 139
>emb|BX822807.1|CNS0A75T Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB65ZD08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1010 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 178 atcttcgtcttcgccggctccggatccgg 206 |||||||||||||||||||| || ||||| Sbjct: 147 atcttcgtcttcgccggctcaggctccgg 175
>emb|BX822624.1|CNS0A742 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB53ZH08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1020 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 178 atcttcgtcttcgccggctccggatccgg 206 |||||||||||||||||||| || ||||| Sbjct: 145 atcttcgtcttcgccggctcaggctccgg 173
>emb|BX824073.1|CNS0A6T2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH1ZE06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1008 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 178 atcttcgtcttcgccggctccggatccgg 206 |||||||||||||||||||| || ||||| Sbjct: 145 atcttcgtcttcgccggctcaggctccgg 173
>emb|BX822975.1|CNS0A733 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB78ZD01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1054 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 178 atcttcgtcttcgccggctccggatccgg 206 |||||||||||||||||||| || ||||| Sbjct: 136 atcttcgtcttcgccggctcaggctccgg 164
>emb|BX824311.1|CNS0A6PE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH38ZH05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 995 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 178 atcttcgtcttcgccggctccggatccgg 206 |||||||||||||||||||| || ||||| Sbjct: 154 atcttcgtcttcgccggctcaggctccgg 182
>emb|BX823607.1|CNS0A6MK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS56ZB09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1012 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 178 atcttcgtcttcgccggctccggatccgg 206 |||||||||||||||||||| || ||||| Sbjct: 145 atcttcgtcttcgccggctcaggctccgg 173
>emb|BX842163.1|CNS09YDT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH74ZE01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 921 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 178 atcttcgtcttcgccggctccggatccgg 206 |||||||||||||||||||| || ||||| Sbjct: 145 atcttcgtcttcgccggctcaggctccgg 173
>emb|BX842138.1|CNS09YDN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS54ZD02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1062 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 178 atcttcgtcttcgccggctccggatccgg 206 |||||||||||||||||||| || ||||| Sbjct: 145 atcttcgtcttcgccggctcaggctccgg 173
>gb|AF133531.1|AF133531 Mesembryanthemum crystallinum water channel protein MipI (MipI) mRNA, complete cds Length = 1035 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 295 gtggccgtctccgtgggcgccaacatctc 323 ||||||||||| |||||||| |||||||| Sbjct: 281 gtggccgtctcagtgggcgctaacatctc 309
>dbj|AB028611.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MFE16 Length = 82646 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 178 atcttcgtcttcgccggctccggatccgg 206 |||||||||||||||||||| || ||||| Sbjct: 16201 atcttcgtcttcgccggctcaggctccgg 16173
>gb|DQ149581.1| Xerophyta humilis PIP1 aquaporin mRNA, complete cds Length = 1262 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 144 ccgcgccggcgtcgccgagttcata 168 |||||||||| |||||||||||||| Sbjct: 241 ccgcgccggcatcgccgagttcata 265
>ref|NM_197137.1| Oryza sativa (japonica cultivar-group) putative beta-tonoplast intrinsic protein (OSJNBa0051D19.19), mRNA Length = 1186 Score = 40.1 bits (20), Expect = 4.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 130 cacccggacaccttccgcgccggcgtcgccgagttc 165 |||||||||||| ||||||||| | || |||||||| Sbjct: 212 cacccggacaccatccgcgccgccatctccgagttc 247
>ref|NM_186867.1| Oryza sativa (japonica cultivar-group), mRNA Length = 642 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 cgccggcgtcgccgagttca 166 |||||||||||||||||||| Sbjct: 423 cgccggcgtcgccgagttca 442
>ref|NM_186862.2| Oryza sativa (japonica cultivar-group), mRNA Length = 893 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 cgccggcgtcgccgagttca 166 |||||||||||||||||||| Sbjct: 508 cgccggcgtcgccgagttca 527
>gb|AC128643.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0007B15 map S10318, complete sequence Length = 125243 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 tcgccatcggcgccccgggggagc 124 ||||||||| |||||||||||||| Sbjct: 18301 tcgccatcgccgccccgggggagc 18324
>gb|AC126799.3| Mus musculus BAC clone RP24-388B22 from chromosome 13, complete sequence Length = 168873 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 aacactagcagctacacagcacac 41 |||||||||||||| ||||||||| Sbjct: 72108 aacactagcagctaaacagcacac 72131
>ref|XM_851162.1| PREDICTED: Canis familiaris hypothetical protein LOC606924 (LOC606924), mRNA Length = 744 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 tggccgtctccgtgggcgcc 315 |||||||||||||||||||| Sbjct: 307 tggccgtctccgtgggcgcc 288
>gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 genomic sequence, complete sequence Length = 131984 Score = 40.1 bits (20), Expect = 4.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 130 cacccggacaccttccgcgccggcgtcgccgagttc 165 |||||||||||| ||||||||| | || |||||||| Sbjct: 26938 cacccggacaccatccgcgccgccatctccgagttc 26903
>gb|AC124494.4| Mus musculus BAC clone RP23-464P12 from chromosome 13, complete sequence Length = 204177 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 cctaggaaaaaagagtgccc 77 |||||||||||||||||||| Sbjct: 94259 cctaggaaaaaagagtgccc 94240
>gb|AF521135.1| Kandelia candel tonoplast intrinsic protein (TIP) mRNA, complete cds Length = 1099 Score = 40.1 bits (20), Expect = 4.4 Identities = 50/60 (83%) Strand = Plus / Plus Query: 157 gccgagttcatatccatgctcatcttcgtcttcgccggctccggatccggcatggccttc 216 ||||||||||| |||| || || ||||| ||||||||| || ||||||||||||||| Sbjct: 171 gccgagttcatctccacccttattttcgtattcgccggcgaaggttccggcatggccttc 230
>emb|Y08161.1|NTAQP1 N.tabacum mRNA for aquaporin 1 Length = 978 Score = 40.1 bits (20), Expect = 4.4 Identities = 47/56 (83%) Strand = Plus / Plus Query: 274 gcgcacgcgttcgcgcttttcgtggccgtctccgtgggcgccaacatctccagcgg 329 ||||| || |||| ||| || |||||||||||||| || || ||||||||| |||| Sbjct: 250 gcgcatgccttcgggctgtttgtggccgtctccgtcggtgctaacatctccggcgg 305
>emb|X76911.1|HVEMIP H.vulgare mRNA for transmembrane protein Length = 1225 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 144 ccgcgccggcgtcgccgagttcat 167 |||||||||| ||||||||||||| Sbjct: 229 ccgcgccggcatcgccgagttcat 252
>emb|AJ005078.2|PAAJ5078 Picea abies mRNA for aquaporin-like protein Length = 1007 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 ccgtgggcgccaacatctcc 324 |||||||||||||||||||| Sbjct: 292 ccgtgggcgccaacatctcc 311
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 138 caccttccgcgccggcgtcgccga 161 ||||||| |||||||||||||||| Sbjct: 1675795 caccttcagcgccggcgtcgccga 1675818
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 tcgccatcggcgccccgggggagc 124 ||||||||| |||||||||||||| Sbjct: 3424346 tcgccatcgccgccccgggggagc 3424369
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 4.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 130 cacccggacaccttccgcgccggcgtcgccgagttc 165 |||||||||||| ||||||||| | || |||||||| Sbjct: 18186190 cacccggacaccatccgcgccgccatctccgagttc 18186225
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 cgccggcgtcgccgagttca 166 |||||||||||||||||||| Sbjct: 8439402 cgccggcgtcgccgagttca 8439383 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 cgccggcgtcgccgagttca 166 |||||||||||||||||||| Sbjct: 8414705 cgccggcgtcgccgagttca 8414686
>dbj|AB206104.1| Mimosa pudica tip1;1 mRNA for tonoplast intrinsic protein 1;1, complete cds Length = 1067 Score = 40.1 bits (20), Expect = 4.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 292 ttcgtggccgtctccgtgggcgccaacatctc 323 |||||||||||| |||| || ||||||||||| Sbjct: 278 ttcgtggccgtcgccgtcggtgccaacatctc 309
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 cctggcgcacgcgttcgcgc 289 |||||||||||||||||||| Sbjct: 1791098 cctggcgcacgcgttcgcgc 1791079
>dbj|AP005183.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0021G06 Length = 137678 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 cgccggcgtcgccgagttca 166 |||||||||||||||||||| Sbjct: 119803 cgccggcgtcgccgagttca 119784
>dbj|AK111931.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-C03, full insert sequence Length = 1200 Score = 40.1 bits (20), Expect = 4.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 130 cacccggacaccttccgcgccggcgtcgccgagttc 165 |||||||||||| ||||||||| | || |||||||| Sbjct: 221 cacccggacaccatccgcgccgccatctccgagttc 256
>dbj|AP005178.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0056I06 Length = 138653 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 cgccggcgtcgccgagttca 166 |||||||||||||||||||| Sbjct: 70995 cgccggcgtcgccgagttca 70976 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 cgccggcgtcgccgagttca 166 |||||||||||||||||||| Sbjct: 46298 cgccggcgtcgccgagttca 46279
>dbj|AB114828.1| Oryza sativa (japonica cultivar-group) OsTIP3 mRNA for tonoplast intrinsic protein, complete cds Length = 1178 Score = 40.1 bits (20), Expect = 4.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 130 cacccggacaccttccgcgccggcgtcgccgagttc 165 |||||||||||| ||||||||| | || |||||||| Sbjct: 204 cacccggacaccatccgcgccgccatctccgagttc 239
>dbj|AK107935.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-A06, full insert sequence Length = 893 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 cgccggcgtcgccgagttca 166 |||||||||||||||||||| Sbjct: 508 cgccggcgtcgccgagttca 527
>dbj|AK106383.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-E03, full insert sequence Length = 1787 Score = 40.1 bits (20), Expect = 4.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 130 cacccggacaccttccgcgccggcgtcgccgagttc 165 |||||||||||| ||||||||| | || |||||||| Sbjct: 969 cacccggacaccatccgcgccgccatctccgagttc 934
>gb|AF118381.1|AF118381 Brassica napus tonoplast intrinsic protein (gamma-TIP2) mRNA, complete cds Length = 1020 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 atcttcgtcttcgccggctc 197 |||||||||||||||||||| Sbjct: 106 atcttcgtcttcgccggctc 125
>dbj|AB009309.2| Hordeum vulgare HvPIP1;5 mRNA, complete cds Length = 1147 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 144 ccgcgccggcgtcgccgagttcat 167 |||||||||| ||||||||||||| Sbjct: 244 ccgcgccggcatcgccgagttcat 267
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 4.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 130 cacccggacaccttccgcgccggcgtcgccgagttc 165 |||||||||||| ||||||||| | || |||||||| Sbjct: 18195443 cacccggacaccatccgcgccgccatctccgagttc 18195478
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 tcgccatcggcgccccgggggagc 124 ||||||||| |||||||||||||| Sbjct: 3433050 tcgccatcgccgccccgggggagc 3433073
>dbj|D45077.1|CUCMP23A Cucurbita cv. Kurokawa Amakuri mRNA for MP23 precursor, complete cds Length = 1249 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 tcatcttcgtcttcgccggc 195 |||||||||||||||||||| Sbjct: 339 tcatcttcgtcttcgccggc 358 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,503,253 Number of Sequences: 3902068 Number of extensions: 2503253 Number of successful extensions: 49818 Number of sequences better than 10.0: 107 Number of HSP's better than 10.0 without gapping: 107 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 48905 Number of HSP's gapped (non-prelim): 908 length of query: 331 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 309 effective length of database: 17,147,199,772 effective search space: 5298484729548 effective search space used: 5298484729548 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
