Clone Name | bart57h07 |
---|---|
Clone Library Name | barley_pub |
>CO410_WHEAT (P46524) Dehydrin COR410 (Cold-induced COR410 protein)| Length = 262 Score = 110 bits (276), Expect = 2e-24 Identities = 75/163 (46%), Positives = 77/163 (47%), Gaps = 8/163 (4%) Frame = +1 Query: 100 MEDERSTQSYQGAEA-DQVEVTDRXXXXXXXXXXXXXXXXXXXXXXVTGMXXXXXXX--- 267 MEDERSTQSYQG EA +QVEVTDR VTGM Sbjct: 1 MEDERSTQSYQGGEAAEQVEVTDRGLLGNLLGKKKAEEDKEKEEELVTGMEKVSVEEPEV 60 Query: 268 -XXXXXDGEKKETLFSKLHRXXXXXXXXXXXXXXXXVIDENXXXXXXXXXXXXXXXXXXX 444 DGEKKETLFSKLHR VID+N Sbjct: 61 KKEEHEDGEKKETLFSKLHRSSSSSSSSSDEEEEE-VIDDNGEVIKRKKKKGLKEKLQGK 119 Query: 445 XXXXXDNEAEHVTGLPAPMAPASVQT---HHDTDVVVEKIDGD 564 D E EHVTGLPAP APASVQT HHDTDVVVEKIDGD Sbjct: 120 LPGHKDTEGEHVTGLPAPAAPASVQTHGGHHDTDVVVEKIDGD 162
>DIAP2_MOUSE (O70566) Protein diaphanous homolog 2 (Diaphanous-related formin-2)| (DRF2) (mDia3) Length = 1098 Score = 31.2 bits (69), Expect = 2.2 Identities = 12/24 (50%), Positives = 13/24 (54%) Frame = -2 Query: 172 GPCPSPPPDRPQLPGMTGCSSHPP 101 GPCP PPP P P + G PP Sbjct: 556 GPCPPPPPPPPPPPPLPGVVPPPP 579
>DIAP1_HUMAN (O60610) Protein diaphanous homolog 1 (Diaphanous-related formin-1)| (DRF1) Length = 1248 Score = 30.4 bits (67), Expect = 3.7 Identities = 13/23 (56%), Positives = 13/23 (56%) Frame = -2 Query: 169 PCPSPPPDRPQLPGMTGCSSHPP 101 P P PPP P LPG T S PP Sbjct: 601 PPPPPPPPPPPLPGGTAISPPPP 623
>EVL_PONPY (Q5R896) Ena/VASP-like protein (Ena/vasodilator stimulated| phosphoprotein-like) Length = 422 Score = 30.0 bits (66), Expect = 4.8 Identities = 16/35 (45%), Positives = 18/35 (51%) Frame = -2 Query: 172 GPCPSPPPDRPQLPGMTGCSSHPP*SRSVGAAKGS 68 GP P PPP P P TG + PP G A+GS Sbjct: 187 GPPPPPPPPVP--PPPTGATPPPPPPLPAGGAQGS 219
>EVL_HUMAN (Q9UI08) Ena/VASP-like protein (Ena/vasodilator stimulated| phosphoprotein-like) Length = 416 Score = 30.0 bits (66), Expect = 4.8 Identities = 16/35 (45%), Positives = 18/35 (51%) Frame = -2 Query: 172 GPCPSPPPDRPQLPGMTGCSSHPP*SRSVGAAKGS 68 GP P PPP P P TG + PP G A+GS Sbjct: 181 GPPPPPPPPVP--PPPTGATPPPPPPLPAGGAQGS 213
>EVL_RAT (O08719) Ena/VASP-like protein (Ena/vasodilator stimulated| phosphoprotein-like) Length = 393 Score = 29.3 bits (64), Expect = 8.2 Identities = 17/42 (40%), Positives = 21/42 (50%) Frame = -2 Query: 172 GPCPSPPPDRPQLPGMTGCSSHPP*SRSVGAAKGSWELEKTA 47 GP P PPP P P TG + PP G A+G+ E +A Sbjct: 179 GPPPPPPPPVP--PPPTGSTPPPPPPLPAGGAQGTNHDESSA 218
>EVL_MOUSE (P70429) Ena/VASP-like protein (Ena/vasodilator stimulated| phosphoprotein-like) Length = 414 Score = 29.3 bits (64), Expect = 8.2 Identities = 17/42 (40%), Positives = 21/42 (50%) Frame = -2 Query: 172 GPCPSPPPDRPQLPGMTGCSSHPP*SRSVGAAKGSWELEKTA 47 GP P PPP P P TG + PP G A+G+ E +A Sbjct: 179 GPPPPPPPPVP--PPPTGSTPPPPPPLPAGGAQGTNHDESSA 218 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.133 0.371 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,926,282 Number of Sequences: 219361 Number of extensions: 621119 Number of successful extensions: 3329 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 2622 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3244 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4757699440 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)