ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart57h04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_466392.1| Oryza sativa (japonica cultivar-group), mRNA 68 3e-08
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
3dbj|AP005116.3| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
4dbj|AP006070.2| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
5dbj|AK109600.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 3e-08
6gb|BT016428.1| Zea mays clone Contig261 mRNA sequence 58 3e-05
7ref|XM_472738.1| Oryza sativa (japonica cultivar-group), predic... 48 0.032
8emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4,... 48 0.032
9dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.032
10dbj|AK104444.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.032
11dbj|AK059553.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.032
12gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chr... 42 2.0
13emb|AL035660.16|HS300I2 Human DNA sequence from clone RP1-300I2 ... 42 2.0
14emb|Z47556.1|HSSG1SG2 H.sapiens genes for semenogelin I and seme... 42 2.0
15gb|DP000037.1| Pan troglodytes target 106 genomic scaffold 42 2.0
16gb|DP000041.1| Gorilla gorilla gorilla target 106 genomic scaffold 42 2.0
17gb|DP000045.1| Pongo pygmaeus target 106 genomic scaffold 42 2.0
18ref|XM_571791.1| Cryptococcus neoformans var. neoformans JEC21 c... 42 2.0
19gb|AC122394.5| Mus musculus BAC clone RP24-85N8 from 6, complete... 42 2.0
20emb|AL732493.17| Mouse DNA sequence from clone RP23-358F6 on chr... 42 2.0
21ref|XM_472739.1| Oryza sativa (japonica cultivar-group), predic... 40 7.8
22gb|AF357202.1| Streptomyces nodosus amphotericin biosynthetic ge... 40 7.8
23gb|AY446348.1| Cicer arietinum microsatellite A6 25902 sequence 40 7.8
24ref|XM_361940.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 7.8
25ref|XM_882560.1| PREDICTED: Bos taurus similar to RAP guanine-nu... 40 7.8
26ref|XM_882554.1| PREDICTED: Bos taurus similar to RAP guanine-nu... 40 7.8
27ref|XM_882548.1| PREDICTED: Bos taurus similar to RAP guanine-nu... 40 7.8
28ref|XM_615454.2| PREDICTED: Bos taurus similar to RAP guanine-nu... 40 7.8
29ref|XM_882537.1| PREDICTED: Bos taurus similar to RAP guanine-nu... 40 7.8
30gb|AC135116.2| Mus musculus BAC clone RP24-316A1 from chromosome... 40 7.8
31gb|DQ160197.1| Homo sapiens RAD51-like 1 (S. cerevisiae) (RAD51L... 40 7.8
32emb|CT009638.5| Zebrafish DNA sequence from clone CH73-162A18 in... 40 7.8
33ref|XM_798896.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 7.8
34ref|XM_538388.2| PREDICTED: Canis familiaris similar to CDC42 ef... 40 7.8
35gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 7.8
36emb|AL391122.9| Human DNA sequence from clone RP11-122A8 on chro... 40 7.8
37emb|X74465.1|HPV10 Human papillomavirus type 10 genomic DNA 40 7.8
38emb|CR925677.1| Ehrlichia ruminantium str. Gardel, complete genome 40 7.8
39emb|BX465863.11| Zebrafish DNA sequence from clone RP71-5C20 in ... 40 7.8
40gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 7.8
41dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
42gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 7.8
43dbj|BA000026.2| Mycoplasma penetrans HF-2 DNA, complete genome 40 7.8
44dbj|AP006163.4| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
45dbj|AK106058.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.8
46emb|AL359951.4|CNS05TF3 Human chromosome 14 DNA sequence BAC R-1... 40 7.8
47emb|CR974479.17| Pig DNA sequence from clone PigE-150P18 on chro... 40 7.8
48emb|AL157915.3|CNS01RGD Human chromosome 14 DNA sequence BAC R-6... 40 7.8
49gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 7.8
50dbj|AK114719.1| Ciona intestinalis cDNA, clone:cieg014j11, full ... 40 7.8
51gb|AC005279.1|AC005279 Homo sapiens chromosome 17, clone hRPK.10... 40 7.8 
>ref|XM_466392.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1299

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                 
Query: 514 aagaagggggatttctccatcaaggtcaccaactgggg 551
           |||||||||||||||||||||| |||||||||||||||
Sbjct: 156 aagaagggggatttctccatcagggtcaccaactgggg 193
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                      
Query: 514      aagaagggggatttctccatcaaggtcaccaactgggg 551
                |||||||||||||||||||||| |||||||||||||||
Sbjct: 22122036 aagaagggggatttctccatcagggtcaccaactgggg 22122073
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>dbj|AP005116.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0703B01
          Length = 137445

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                   
Query: 514   aagaagggggatttctccatcaaggtcaccaactgggg 551
             |||||||||||||||||||||| |||||||||||||||
Sbjct: 95935 aagaagggggatttctccatcagggtcaccaactgggg 95972
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>dbj|AP006070.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1342F01
          Length = 153287

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                   
Query: 514   aagaagggggatttctccatcaaggtcaccaactgggg 551
             |||||||||||||||||||||| |||||||||||||||
Sbjct: 17880 aagaagggggatttctccatcagggtcaccaactgggg 17917
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>dbj|AK109600.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-E04, full
           insert sequence
          Length = 1324

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                 
Query: 514 aagaagggggatttctccatcaaggtcaccaactgggg 551
           |||||||||||||||||||||| |||||||||||||||
Sbjct: 156 aagaagggggatttctccatcagggtcaccaactgggg 193
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>gb|BT016428.1| Zea mays clone Contig261 mRNA sequence
          Length = 1373

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                            
Query: 519 gggggatttctccatcaaggtcaccaactgggg 551
           ||||||||||||| |||||||||||||||||||
Sbjct: 125 gggggatttctccgtcaaggtcaccaactgggg 157
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>ref|XM_472738.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1206

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 516 gaagggggatttctccatcaaggtcaccaactgggg 551
           |||||| ||||||||||||| ||||||||| |||||
Sbjct: 123 gaagggagatttctccatcagggtcaccaattgggg 158
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>emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B21,
             complete sequence
          Length = 138969

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                 
Query: 516   gaagggggatttctccatcaaggtcaccaactgggg 551
             |||||| ||||||||||||| ||||||||| |||||
Sbjct: 77451 gaagggagatttctccatcagggtcaccaattgggg 77486



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 516   gaagggggatttctccatcaaggtcaccaactgggg 551
             ||||||||| |||||| | ||| |||||||||||||
Sbjct: 86184 gaagggggacttctccgtgaagatcaccaactgggg 86219
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                    
Query: 516      gaagggggatttctccatcaaggtcaccaactgggg 551
                |||||| ||||||||||||| ||||||||| |||||
Sbjct: 22868676 gaagggagatttctccatcagggtcaccaattgggg 22868711



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                    
Query: 516      gaagggggatttctccatcaaggtcaccaactgggg 551
                ||||||||| |||||| | ||| |||||||||||||
Sbjct: 22877409 gaagggggacttctccgtgaagatcaccaactgggg 22877444
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>dbj|AK104444.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-H06, full
           insert sequence
          Length = 1285

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 516 gaagggggatttctccatcaaggtcaccaactgggg 551
           |||||| ||||||||||||| ||||||||| |||||
Sbjct: 152 gaagggagatttctccatcagggtcaccaattgggg 187
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>dbj|AK059553.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-G05, full
           insert sequence
          Length = 1329

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 516 gaagggggatttctccatcaaggtcaccaactgggg 551
           |||||| ||||||||||||| ||||||||| |||||
Sbjct: 176 gaagggagatttctccatcagggtcaccaattgggg 211
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>gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete
              sequence
          Length = 1347793

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 412    agagctgcacttcttcctgtt 432
              |||||||||||||||||||||
Sbjct: 196837 agagctgcacttcttcctgtt 196857
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>emb|AL035660.16|HS300I2 Human DNA sequence from clone RP1-300I2 on chromosome 20q12-13.12
            Contains a novel gene and the SLPI gene for secretory
            leukocyte protease inhibitor (antileukoproteinase),
            complete sequence
          Length = 63796

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 65   catcatcatcaagaaacaaaacaaa 89
            ||||||||| |||||||||||||||
Sbjct: 1694 catcatcattaagaaacaaaacaaa 1670
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>emb|Z47556.1|HSSG1SG2 H.sapiens genes for semenogelin I and semenogelin II
          Length = 28069

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 65    catcatcatcaagaaacaaaacaaa 89
             ||||||||| |||||||||||||||
Sbjct: 26791 catcatcattaagaaacaaaacaaa 26767
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>gb|DP000037.1| Pan troglodytes target 106 genomic scaffold
          Length = 302717

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 65     catcatcatcaagaaacaaaacaaa 89
              ||||||||| |||||||||||||||
Sbjct: 261937 catcatcattaagaaacaaaacaaa 261913
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>gb|DP000041.1| Gorilla gorilla gorilla target 106 genomic scaffold
          Length = 355851

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 65     catcatcatcaagaaacaaaacaaa 89
              ||||||||| |||||||||||||||
Sbjct: 275499 catcatcattaagaaacaaaacaaa 275475
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>gb|DP000045.1| Pongo pygmaeus target 106 genomic scaffold
          Length = 644818

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 65     catcatcatcaagaaacaaaacaaa 89
              ||||||||| |||||||||||||||
Sbjct: 375471 catcatcattaagaaacaaaacaaa 375447
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>ref|XM_571791.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7
          Length = 5621

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 412  agagctgcacttcttcctgtt 432
            |||||||||||||||||||||
Sbjct: 1492 agagctgcacttcttcctgtt 1512
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>gb|AC122394.5| Mus musculus BAC clone RP24-85N8 from 6, complete sequence
          Length = 215914

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 67     tcatcatcaagaaacaaaacaaaca 91
              |||||||||| ||||||||||||||
Sbjct: 126321 tcatcatcaaaaaacaaaacaaaca 126345
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>emb|AL732493.17| Mouse DNA sequence from clone RP23-358F6 on chromosome 2, complete
             sequence
          Length = 195388

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 360   ctgctattagtagtgctgtgc 380
             |||||||||||||||||||||
Sbjct: 12828 ctgctattagtagtgctgtgc 12808
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>ref|XM_472739.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1092

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 516 gaagggggatttctccatcaaggtcaccaactgggg 551
           ||||||||| |||||| | ||| |||||||||||||
Sbjct: 114 gaagggggacttctccgtgaagatcaccaactgggg 149
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>gb|AF357202.1| Streptomyces nodosus amphotericin biosynthetic gene cluster, complete
             sequence
          Length = 113193

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 253   cgagcgcaccgccggcgccctccc 276
             ||||||||||||||||||| ||||
Sbjct: 11662 cgagcgcaccgccggcgccgtccc 11685



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 144   cgagcgcaccgccggcgccctccc 167
             ||||||||||||||||||| ||||
Sbjct: 11662 cgagcgcaccgccggcgccgtccc 11685
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>gb|AY446348.1| Cicer arietinum microsatellite A6 25902 sequence
          Length = 732

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 68 catcatcaagaaacaaaaca 87
          ||||||||||||||||||||
Sbjct: 36 catcatcaagaaacaaaaca 17
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>ref|XM_361940.1| Magnaporthe grisea 70-15 hypothetical protein (MG04385.4) partial
           cds
          Length = 1977

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 69  atcatcaagaaacaaaacaa 88
           ||||||||||||||||||||
Sbjct: 110 atcatcaagaaacaaaacaa 91
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>ref|XM_882560.1| PREDICTED: Bos taurus similar to RAP guanine-nucleotide-exchange
            factor 3, transcript variant 5 (LOC535383), mRNA
          Length = 3371

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 402  aatgatggccagagctgcac 421
            ||||||||||||||||||||
Sbjct: 2852 aatgatggccagagctgcac 2871
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>ref|XM_882554.1| PREDICTED: Bos taurus similar to RAP guanine-nucleotide-exchange
            factor 3, transcript variant 4 (LOC535383), mRNA
          Length = 3397

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 402  aatgatggccagagctgcac 421
            ||||||||||||||||||||
Sbjct: 2855 aatgatggccagagctgcac 2874
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>ref|XM_882548.1| PREDICTED: Bos taurus similar to RAP guanine-nucleotide-exchange
           factor 3, transcript variant 3 (LOC535383), mRNA
          Length = 1323

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 402 aatgatggccagagctgcac 421
           ||||||||||||||||||||
Sbjct: 781 aatgatggccagagctgcac 800
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>ref|XM_615454.2| PREDICTED: Bos taurus similar to RAP guanine-nucleotide-exchange
            factor 3, transcript variant 1 (LOC535383), mRNA
          Length = 3394

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 402  aatgatggccagagctgcac 421
            ||||||||||||||||||||
Sbjct: 2852 aatgatggccagagctgcac 2871
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>ref|XM_882537.1| PREDICTED: Bos taurus similar to RAP guanine-nucleotide-exchange
           factor 3, transcript variant 2 (LOC535383), mRNA
          Length = 1391

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 402 aatgatggccagagctgcac 421
           ||||||||||||||||||||
Sbjct: 849 aatgatggccagagctgcac 868
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>gb|AC135116.2| Mus musculus BAC clone RP24-316A1 from chromosome 5, complete sequence
          Length = 138444

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 513   caagaagggggatttctcca 532
             ||||||||||||||||||||
Sbjct: 81086 caagaagggggatttctcca 81067
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>gb|DQ160197.1| Homo sapiens RAD51-like 1 (S. cerevisiae) (RAD51L1) gene, complete cds
          Length = 660392

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 73     tcaagaaacaaaacaaacag 92
              ||||||||||||||||||||
Sbjct: 336986 tcaagaaacaaaacaaacag 336967
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>emb|CT009638.5| Zebrafish DNA sequence from clone CH73-162A18 in linkage group 6,
             complete sequence
          Length = 101890

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    acactcccctcatcatcatc 74
             ||||||||||||||||||||
Sbjct: 86892 acactcccctcatcatcatc 86911
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>ref|XM_798896.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053509341.20) partial mRNA
          Length = 2376

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 417  tgcacttcttcctgttgcgt 436
            ||||||||||||||||||||
Sbjct: 1586 tgcacttcttcctgttgcgt 1567
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>ref|XM_538388.2| PREDICTED: Canis familiaris similar to CDC42 effector protein (Rho
           GTPase binding) 1 (LOC481267), mRNA
          Length = 496

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 261 ccgccggcgccctcccctgc 280
           ||||||||||||||||||||
Sbjct: 305 ccgccggcgccctcccctgc 324



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 152 ccgccggcgccctcccctgc 171
           ||||||||||||||||||||
Sbjct: 305 ccgccggcgccctcccctgc 324
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 247     gcccatcgagcgcaccgccg 266
               ||||||||||||||||||||
Sbjct: 4530659 gcccatcgagcgcaccgccg 4530678



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 138     gcccatcgagcgcaccgccg 157
               ||||||||||||||||||||
Sbjct: 4530659 gcccatcgagcgcaccgccg 4530678
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>emb|AL391122.9| Human DNA sequence from clone RP11-122A8 on chromosome 13 Contains the 5'
              end of the gene for zizimin1, a ribosomal protein S6 (RPS6)
              pseudogene, a pseudogene similar to part of
              glyceraldehyde-3-phosphate dehydrogenase (GAPD) and a CpG
              island, complete sequence
          Length = 173336

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     catcaagaaacaaaacaaac 90
              ||||||||||||||||||||
Sbjct: 153617 catcaagaaacaaaacaaac 153636
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>emb|X74465.1|HPV10 Human papillomavirus type 10 genomic DNA
          Length = 7919

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 55   acactcccctcatcatcatc 74
            ||||||||||||||||||||
Sbjct: 1299 acactcccctcatcatcatc 1280
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>emb|CR925677.1| Ehrlichia ruminantium str. Gardel, complete genome
          Length = 1499920

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 64      tcatcatcatcaagaaacaaaaca 87
               ||||||||||||| ||||||||||
Sbjct: 1219732 tcatcatcatcaaaaaacaaaaca 1219755
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>emb|BX465863.11| Zebrafish DNA sequence from clone RP71-5C20 in linkage group 5, complete
              sequence
          Length = 117261

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 40     ctagcgcactacactacact 59
              ||||||||||||||||||||
Sbjct: 110575 ctagcgcactacactacact 110594
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 23      gaattccagatcccgatcta 42
               ||||||||||||||||||||
Sbjct: 3241980 gaattccagatcccgatcta 3241999
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 354     accactctgctattagtagt 373
               ||||||||||||||||||||
Sbjct: 2795219 accactctgctattagtagt 2795200
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 244     cgcgcccatcgagcgcaccg 263
               ||||||||||||||||||||
Sbjct: 3631325 cgcgcccatcgagcgcaccg 3631344



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 135     cgcgcccatcgagcgcaccg 154
               ||||||||||||||||||||
Sbjct: 3631325 cgcgcccatcgagcgcaccg 3631344
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>dbj|BA000026.2| Mycoplasma penetrans HF-2 DNA, complete genome
          Length = 1358633

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 11     ggaaaacatccagaattcca 30
              ||||||||||||||||||||
Sbjct: 295879 ggaaaacatccagaattcca 295898
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>dbj|AP006163.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1364A02
          Length = 137933

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 354   accactctgctattagtagt 373
             ||||||||||||||||||||
Sbjct: 98780 accactctgctattagtagt 98761
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>dbj|AK106058.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-F10, full
           insert sequence
          Length = 1343

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 516 gaagggggatttctccatcaaggtcaccaactgggg 551
           ||||||||| |||||| | ||| |||||||||||||
Sbjct: 177 gaagggggacttctccgtgaagatcaccaactgggg 212
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>emb|AL359951.4|CNS05TF3 Human chromosome 14 DNA sequence BAC R-196A3 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 176202

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    tcaagaaacaaaacaaacag 92
             ||||||||||||||||||||
Sbjct: 24035 tcaagaaacaaaacaaacag 24054
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>emb|CR974479.17| Pig DNA sequence from clone PigE-150P18 on chromosome 7, complete
             sequence
          Length = 152730

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 150   caccgccggcgccctcccct 169
             ||||||||||||||||||||
Sbjct: 77269 caccgccggcgccctcccct 77288



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 259   caccgccggcgccctcccct 278
             ||||||||||||||||||||
Sbjct: 77269 caccgccggcgccctcccct 77288
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>emb|AL157915.3|CNS01RGD Human chromosome 14 DNA sequence BAC R-68M10 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 146002

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    tcaagaaacaaaacaaacag 92
             ||||||||||||||||||||
Sbjct: 95752 tcaagaaacaaaacaaacag 95771
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 112    cgcgcaacccggcgacgaac 131
              ||||||||||||||||||||
Sbjct: 797988 cgcgcaacccggcgacgaac 797969
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>dbj|AK114719.1| Ciona intestinalis cDNA, clone:cieg014j11, full insert sequence
          Length = 2569

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 75   aagaaacaaaacaaacagtg 94
            ||||||||||||||||||||
Sbjct: 991  aagaaacaaaacaaacagtg 1010
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>gb|AC005279.1|AC005279 Homo sapiens chromosome 17, clone hRPK.103_M_22, complete sequence
          Length = 151429

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 14    aaacatccagaattccagat 33
             ||||||||||||||||||||
Sbjct: 60184 aaacatccagaattccagat 60203


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,403,992
Number of Sequences: 3902068
Number of extensions: 5403992
Number of successful extensions: 157156
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 156410
Number of HSP's gapped (non-prelim): 746
length of query: 577
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 554
effective length of database: 17,143,297,704
effective search space: 9497386928016
effective search space used: 9497386928016
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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