ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart57g11 |
|---|---|
| Clone Library Name | barley_pub |
>ATCU_SALTY (Q8ZR95) Copper-transporting P-type ATPase (EC 3.6.3.4)| Length = 832 Score = 43.1 bits (100), Expect = 5e-04 Identities = 18/48 (37%), Positives = 29/48 (60%) Frame = +1 Query: 220 LHCAGCATKVKRAIKHAPGVESVKTDTAGNKVVVTGAADAADLKERIE 363 + CA C T+V+ A++ PGV + + A +V G+A AADL + +E Sbjct: 106 MSCASCVTRVQHALQSVPGVTQARVNLAERTALVMGSASAADLVQAVE 153 Score = 30.0 bits (66), Expect = 4.6 Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Frame = +1 Query: 193 AQPIVLKVD-LHCAGCATKVKRAIKHAPGVESVKTDTAGNKVVVTGAADAADLKERIE 363 +Q I L +D L C C +VK +++ P VE D + VTG A A L E I+ Sbjct: 1 SQTIDLTLDGLSCGHCVKRVKESLEQRPDVE--LADVTVTEAHVTGTASADALIETIK 56
>ATCU_SALTI (Q8Z8S4) Copper-transporting P-type ATPase (EC 3.6.3.4)| Length = 832 Score = 43.1 bits (100), Expect = 5e-04 Identities = 18/48 (37%), Positives = 29/48 (60%) Frame = +1 Query: 220 LHCAGCATKVKRAIKHAPGVESVKTDTAGNKVVVTGAADAADLKERIE 363 + CA C T+V+ A++ PGV + + A +V G+A AADL + +E Sbjct: 106 MSCASCVTRVQHALQSVPGVTQARVNLAERTALVMGSASAADLVQAVE 153 Score = 30.0 bits (66), Expect = 4.6 Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Frame = +1 Query: 193 AQPIVLKVD-LHCAGCATKVKRAIKHAPGVESVKTDTAGNKVVVTGAADAADLKERIE 363 +Q I L +D L C C +VK +++ P VE D + VTG A A L E I+ Sbjct: 1 SQTIDLTLDGLSCGHCVKRVKESLEQRPDVE--LADVTVTEAHVTGTASADALIETIK 56
>ATCU_ECOLI (Q59385) Copper-transporting P-type ATPase (EC 3.6.3.4)| Length = 833 Score = 40.4 bits (93), Expect = 0.003 Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 7/94 (7%) Frame = +1 Query: 103 ATATHAMGEDKKEKPGKADGGDQKKDAAPAA-------QPIVLKVDLHCAGCATKVKRAI 261 A+ +H + E ++ +A PAA Q ++L + CA C T+V+ A+ Sbjct: 62 ASVSHPKAKPLAESSIPSEALTAVSEALPAATADDDDSQQLLLS-GMSCASCVTRVQNAL 120 Query: 262 KHAPGVESVKTDTAGNKVVVTGAADAADLKERIE 363 + PGV + + A +V G+A DL + +E Sbjct: 121 QSVPGVTQARVNLAERTALVMGSASPQDLVQAVE 154
>ATCU_ECO57 (Q8XD24) Copper-transporting P-type ATPase (EC 3.6.3.4)| Length = 833 Score = 40.4 bits (93), Expect = 0.003 Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 7/94 (7%) Frame = +1 Query: 103 ATATHAMGEDKKEKPGKADGGDQKKDAAPAA-------QPIVLKVDLHCAGCATKVKRAI 261 A+ +H + E ++ +A PAA Q ++L + CA C T+V+ A+ Sbjct: 62 ASVSHPKAKPLAESSIPSEALTAVSEALPAATADDDDSQQLLLS-GMSCASCVTRVQNAL 120 Query: 262 KHAPGVESVKTDTAGNKVVVTGAADAADLKERIE 363 + PGV + + A +V G+A DL + +E Sbjct: 121 QSVPGVTQARVNLAERTALVMGSASPQDLVQAVE 154
>AHM7_ARATH (Q9SH30) Putative copper-transporting ATPase 3 (EC 3.6.3.4)| Length = 995 Score = 36.6 bits (83), Expect = 0.050 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 8/76 (10%) Frame = +1 Query: 160 GGDQKKDAA-----PAAQPIVLKVDLHCAGCATKVKRAIKHAPGVESVKTDTAGNKVVV- 321 GG + AA P ++ + + + C+ CA V++AIK PG+ D N+ + Sbjct: 35 GGSSSETAAFEIDDPISRAVFQVLGMTCSACAGSVEKAIKRLPGIHDAVIDALNNRAQIL 94 Query: 322 --TGAADAADLKERIE 363 + D ++E IE Sbjct: 95 FYPNSVDVETIRETIE 110
>ATCU2_RHIME (P58342) Copper-transporting ATPase 2 (EC 3.6.3.4)| Length = 827 Score = 36.2 bits (82), Expect = 0.065 Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 9/82 (10%) Frame = +1 Query: 169 QKKDAAPAAQPIVLKVD-LHCAGCATKVKRAIKHAPGVESVKTDTAGNKV---VVTGAAD 336 +K AP L+++ + CA C ++V++A+K PGV + A K +++G AD Sbjct: 73 EKAGYAPRIATEELQIEGMTCASCVSRVEKALKAVPGVADAAVNLATEKATVSLISGTAD 132 Query: 337 AADLKERI-----EARTKKPVQ 387 + L+ + E R KP + Sbjct: 133 LSALEAAVRGAGYELRKTKPAE 154
>ATCS_SYNY3 (P73241) Cation-transporting ATPase pacS (EC 3.6.3.-)| Length = 745 Score = 35.8 bits (81), Expect = 0.085 Identities = 18/45 (40%), Positives = 30/45 (66%), Gaps = 1/45 (2%) Frame = +1 Query: 193 AQPIVLKVD-LHCAGCATKVKRAIKHAPGVESVKTDTAGNKVVVT 324 AQ I L+++ + CA CA+ ++RAI PGV+S + + A + VV+ Sbjct: 2 AQTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVS 46
>CADA1_STAAU (P20021) Probable cadmium-transporting ATPase (EC 3.6.3.3) (Cadmium| efflux ATPase) Length = 727 Score = 35.8 bits (81), Expect = 0.085 Identities = 15/43 (34%), Positives = 25/43 (58%) Frame = +1 Query: 226 CAGCATKVKRAIKHAPGVESVKTDTAGNKVVVTGAADAADLKE 354 CA CA K ++ +K PGV+ K + +K+ V G A +L++ Sbjct: 23 CANCAGKFEKNVKKIPGVQDAKVNFGASKIDVYGNASVEELEK 65
>ATCU1_RHIME (P58341) Copper-transporting ATPase 1 (EC 3.6.3.4)| Length = 826 Score = 35.4 bits (80), Expect = 0.11 Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 2/77 (2%) Frame = +1 Query: 169 QKKDAAPAAQPIVLKVDLHCAGCATKVKRAIKHAPGVESVKTDTAGNKVVV--TGAADAA 342 +K A PA ++ + CA C +V++AI PGV S + A + V TGA D Sbjct: 8 EKSAAVPAPTDFGIE-GMTCASCVRRVEKAISAVPGVASATVNLATERASVQFTGAPDTG 66 Query: 343 DLKERIEARTKKPVQIV 393 + IE +P I+ Sbjct: 67 GVLLAIEKAGYEPKVII 83
>CADA2_LISMO (Q60048) Probable cadmium-transporting ATPase (EC 3.6.3.3) (Cadmium| efflux ATPase) Length = 711 Score = 35.4 bits (80), Expect = 0.11 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Frame = +1 Query: 193 AQPIVLKVD-LHCAGCATKVKRAIKHAPGVESVKTDTAGNKVVVTGAADAADLKE 354 A+ V +VD L C CA K +R +K GV + +K+ VTG A +++ Sbjct: 2 AEKTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEASIQQVEQ 56
>FIXI_RHILV (O33533) Nitrogen fixation protein fixI (E1-E2 type cation ATPase| fixI) (EC 3.6.3.-) Length = 761 Score = 35.0 bits (79), Expect = 0.14 Identities = 17/59 (28%), Positives = 30/59 (50%) Frame = +1 Query: 217 DLHCAGCATKVKRAIKHAPGVESVKTDTAGNKVVVTGAADAADLKERIEARTKKPVQIV 393 D+HC GC + ++RA+ P V++ + + +V +E IEAR P +I+ Sbjct: 44 DVHCGGCISTIERALLTLPFVKTARVNLTARRVTCV-------YQEEIEARATDPSKIL 95
>CADA2_STAAU (P37386) Probable cadmium-transporting ATPase (EC 3.6.3.3) (Cadmium| efflux ATPase) Length = 804 Score = 34.7 bits (78), Expect = 0.19 Identities = 15/43 (34%), Positives = 24/43 (55%) Frame = +1 Query: 226 CAGCATKVKRAIKHAPGVESVKTDTAGNKVVVTGAADAADLKE 354 CA CA K ++ +K GV K + +K+ V G+A DL++ Sbjct: 22 CANCAGKFEKNVKELSGVHDAKVNFGASKIDVFGSATVEDLEK 64 Score = 33.1 bits (74), Expect = 0.55 Identities = 14/43 (32%), Positives = 24/43 (55%) Frame = +1 Query: 226 CAGCATKVKRAIKHAPGVESVKTDTAGNKVVVTGAADAADLKE 354 CA CA K ++ +K GV+ K + +K+ V G A +L++ Sbjct: 100 CANCAGKFEKNVKQLAGVQDAKVNFGASKIDVYGNASVEELEK 142
>CADA_BACPF (P30336) Probable cadmium-transporting ATPase (EC 3.6.3.3) (Cadmium| efflux ATPase) Length = 723 Score = 34.7 bits (78), Expect = 0.19 Identities = 15/43 (34%), Positives = 24/43 (55%) Frame = +1 Query: 226 CAGCATKVKRAIKHAPGVESVKTDTAGNKVVVTGAADAADLKE 354 CA CA K ++ +K GVE K + +K+ V G A +L++ Sbjct: 23 CANCAGKFEKNVKQLSGVEDAKVNFGASKIAVYGNATIEELEK 65
>ATCU_YERPE (Q8ZCA7) Copper-transporting P-type ATPase (EC 3.6.3.4)| Length = 961 Score = 33.1 bits (74), Expect = 0.55 Identities = 21/86 (24%), Positives = 35/86 (40%) Frame = +1 Query: 70 LPRSS*GTTIQATATHAMGEDKKEKPGKADGGDQKKDAAPAAQPIVLKVDLHCAGCATKV 249 LP ++ TT A A P + A+ +L + CA C +KV Sbjct: 185 LPTNTTSTTSTADTASATSTAPVINPLPVTESVAQPAASEGESVQLLLTGMSCASCVSKV 244 Query: 250 KRAIKHAPGVESVKTDTAGNKVVVTG 327 + A++ GV+ + + A +VTG Sbjct: 245 QNALQRVDGVQVARVNLAERSALVTG 270
>CADA_STAAR (Q6GIX1) Probable cadmium-transporting ATPase (EC 3.6.3.3) (Cadmium| efflux ATPase) Length = 726 Score = 33.1 bits (74), Expect = 0.55 Identities = 14/43 (32%), Positives = 24/43 (55%) Frame = +1 Query: 226 CAGCATKVKRAIKHAPGVESVKTDTAGNKVVVTGAADAADLKE 354 CA CA K ++ +K GV+ K + +K+ V G A +L++ Sbjct: 22 CANCAGKFEKNVKQLAGVQDAKVNFGASKIDVYGNASVQELEK 64
>ATZN_ECOLI (P37617) Lead, cadmium, zinc and mercury-transporting ATPase (EC| 3.6.3.3) (EC 3.6.3.5) Length = 732 Score = 32.7 bits (73), Expect = 0.72 Identities = 19/53 (35%), Positives = 31/53 (58%) Frame = +1 Query: 220 LHCAGCATKVKRAIKHAPGVESVKTDTAGNKVVVTGAADAADLKERIEARTKK 378 + CA CA KV+ A++ GV V+ A K+VV AD D++ ++E+ +K Sbjct: 57 MDCAACARKVENAVRQLAGVNQVQVLFATEKLVVD--AD-NDIRAQVESALQK 106
>ATCU_RHIME (Q9X5X3) Copper-transporting P-type ATPase (EC 3.6.3.4)| Length = 827 Score = 32.3 bits (72), Expect = 0.94 Identities = 13/41 (31%), Positives = 23/41 (56%) Frame = +1 Query: 226 CAGCATKVKRAIKHAPGVESVKTDTAGNKVVVTGAADAADL 348 CA C ++V++A+K PGV + A K V + +A++ Sbjct: 93 CASCVSRVEKALKAVPGVADASVNLATEKATVRLVSGSAEI 133
>V18K_MLVAB (P03400) 18 kDa protein| Length = 163 Score = 32.0 bits (71), Expect = 1.2 Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 2/70 (2%) Frame = -2 Query: 269 ACLMARL--TLVAQPAQCKSTLSTMGWAAGAASFFWSPPSALPGFSFLSSPMACVAVAWI 96 +C++ +L T AQP + L+ GW + + + W P+ PGFS + AW Sbjct: 10 SCVVHQLPCTFPAQPRRQPPLLTACGWVSCSEDYIW--PAWPPGFSLPGASDPAPRSAWS 67 Query: 95 VVPYELRGRS 66 +P R S Sbjct: 68 ALPCPCRTTS 77
>SPA2_YEAST (P23201) Protein SPA2| Length = 1466 Score = 31.6 bits (70), Expect = 1.6 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 4/36 (11%) Frame = +1 Query: 127 EDKKEKPGKADGG----DQKKDAAPAAQPIVLKVDL 222 E KEKP + +G D+KK+A PA PIV DL Sbjct: 189 EQVKEKPNEPEGKQTSMDEKKEAKPALNPIVTDSDL 224
>ATSY_SYNP7 (P37385) Probable copper-transporting ATPase synA (EC 3.6.3.4)| Length = 790 Score = 31.6 bits (70), Expect = 1.6 Identities = 14/40 (35%), Positives = 26/40 (65%), Gaps = 1/40 (2%) Frame = +1 Query: 181 AAPAAQPIVLKVD-LHCAGCATKVKRAIKHAPGVESVKTD 297 A P++ I+++V+ + CAGC V+R ++ GVE+V + Sbjct: 9 ADPSSTSILVEVEGMKCAGCVAAVERRLQQTAGVEAVSVN 48
>ATSY_SYNP6 (P07893) Probable copper-transporting ATPase synA (EC 3.6.3.4)| Length = 790 Score = 31.6 bits (70), Expect = 1.6 Identities = 14/40 (35%), Positives = 26/40 (65%), Gaps = 1/40 (2%) Frame = +1 Query: 181 AAPAAQPIVLKVD-LHCAGCATKVKRAIKHAPGVESVKTD 297 A P++ I+++V+ + CAGC V+R ++ GVE+V + Sbjct: 9 ADPSSTSILVEVEGMKCAGCVAAVERRLQQTAGVEAVSVN 48
>ICAL_MOUSE (P51125) Calpastatin (Calpain inhibitor)| Length = 788 Score = 31.2 bits (69), Expect = 2.1 Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 6/109 (5%) Frame = +1 Query: 73 PRSS*GTTIQATATHAMGED--KKEKPGKADGGDQKKDAA-PAAQPIVLKVDLHCAGCAT 243 PR S G + T H ++ KPG+ G D+KK A+ ++QP + + A AT Sbjct: 12 PRPSRGAAARHTQEHVNEKNIGSSSKPGEKKGSDEKKAASLGSSQP--SRPHVGEAATAT 69 Query: 244 KV---KRAIKHAPGVESVKTDTAGNKVVVTGAADAADLKERIEARTKKP 381 KV A +P + + +T + G ++ ++ +KKP Sbjct: 70 KVTASSAATSKSPSMSTTETKAIPVNKQLEGPDQKRPREQAVKTESKKP 118
>FIXI_BRAJA (Q59207) Nitrogen fixation protein fixI (E1-E2 type cation ATPase| fixI) (EC 3.6.3.-) Length = 730 Score = 31.2 bits (69), Expect = 2.1 Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 3/51 (5%) Frame = +1 Query: 220 LHCAGCATKVKRAIKHAPGVESVKTDTAGNKVVV---TGAADAADLKERIE 363 +HCAGC K++R + P V + + +V + G D +R+E Sbjct: 28 VHCAGCMAKIERGLSAIPDVTLARVNLTDRRVALEWKAGTLDPGRFIDRLE 78
>CCS1_YEAST (P40202) Superoxide dismutase 1 copper chaperone| Length = 249 Score = 30.8 bits (68), Expect = 2.7 Identities = 9/28 (32%), Positives = 16/28 (57%) Frame = +1 Query: 214 VDLHCAGCATKVKRAIKHAPGVESVKTD 297 + +HC C +K +K+ PG+ S+ D Sbjct: 13 IPMHCENCVNDIKACLKNVPGINSLNFD 40
>R1B14_SOLDE (Q6L3Z7) Putative late blight resistance protein homolog R1B-14| Length = 1317 Score = 30.4 bits (67), Expect = 3.6 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 3/53 (5%) Frame = +1 Query: 202 IVLKVDL---HCAGCATKVKRAIKHAPGVESVKTDTAGNKVVVTGAADAADLK 351 +VLK D+ H G K+ + PGV+SV+ D KV VTG DA +++ Sbjct: 1254 MVLKFDIYQNHDKGRLETFKKLVP-LPGVKSVRFDMDEKKVTVTGVMDANEVQ 1305
>COPA_BACSU (O32220) Copper-transporting P-type ATPase copA (EC 3.6.3.-)| (Protein copA) Length = 803 Score = 30.4 bits (67), Expect = 3.6 Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 3/49 (6%) Frame = +1 Query: 226 CAGCATKVKRAIKHAPGVESVKTDTA---GNKVVVTGAADAADLKERIE 363 CA CA ++++ +K PGV + A N + A ++E+IE Sbjct: 17 CAACAARIEKGLKRMPGVTDANVNLATETSNVIYDPAETGTAAIQEKIE 65
>AMPN_HAECO (Q10737) Aminopeptidase N (EC 3.4.11.2) (Microsomal aminopeptidase)| (Membrane glycoprotein H11) Length = 971 Score = 30.4 bits (67), Expect = 3.6 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = +1 Query: 130 DKKEKPGKADGGDQKKDAAPAAQPIVL 210 D EKPGK D G + KD +P+A ++L Sbjct: 44 DTSEKPGKDDTGGKDKDNSPSAAELLL 70
>R1B19_SOLDE (Q6L406) Putative late blight resistance protein homolog R1B-19| Length = 1582 Score = 30.0 bits (66), Expect = 4.6 Identities = 17/44 (38%), Positives = 23/44 (52%) Frame = +1 Query: 208 LKVDLHCAGCATKVKRAIKHAPGVESVKTDTAGNKVVVTGAADA 339 LK++L K + + PG+ESV TD K+ VTG DA Sbjct: 1363 LKLNLSHDEDIPKAFKRLFLCPGIESVSTDRKEKKLTVTGDVDA 1406
>NODJ_RHISN (P55475) Nodulation protein J| Length = 262 Score = 30.0 bits (66), Expect = 4.6 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 5/70 (7%) Frame = -2 Query: 296 SVLTDSTPGACLMARLTLVAQPAQCKSTL-----STMGWAAGAASFFWSPPSALPGFSFL 132 ++ T T G ++ L A A T +TMG+A+ + F P AL GF+F Sbjct: 103 ALCTQLTLGDIVLGELAWAASKALLAGTAMMLVAATMGFASWPSVLFALPVIALTGFAFA 162 Query: 131 SSPMACVAVA 102 S M A+A Sbjct: 163 SLAMIVTALA 172
>RF3_LACLA (Q9CIK7) Peptide chain release factor 3 (RF-3)| Length = 523 Score = 30.0 bits (66), Expect = 4.6 Identities = 32/99 (32%), Positives = 42/99 (42%), Gaps = 4/99 (4%) Frame = +1 Query: 109 ATHAMGEDKKEKPG---KADGGDQKKDAAPAAQPIVLKVDLHCAGCATKVKRA-IKHAPG 276 A G K K G K+D D +K+ + V++ D AG KR I PG Sbjct: 36 AIREAGTVKARKTGNFAKSDWMDIEKERGISVTSSVMQFDY--AG-----KRVNILDTPG 88 Query: 277 VESVKTDTAGNKVVVTGAADAADLKERIEARTKKPVQIV 393 E DT + V A D + IEA+TKK Q+V Sbjct: 89 HEDFSEDTYRTLMAVDAAVMVIDSAKGIEAQTKKLFQVV 127
>SGK2_HUMAN (Q9HBY8) Serine/threonine-protein kinase Sgk2 (EC 2.7.11.1)| (Serum/glucocorticoid-regulated kinase 2) Length = 427 Score = 29.6 bits (65), Expect = 6.1 Identities = 9/12 (75%), Positives = 11/12 (91%) Frame = -3 Query: 43 GRGGWRSRWCLE 8 GRGGWR +WCL+ Sbjct: 19 GRGGWRGQWCLK 30
>R1B16_SOLDE (Q6L400) Putative late blight resistance protein homolog R1B-16| Length = 1284 Score = 29.6 bits (65), Expect = 6.1 Identities = 13/35 (37%), Positives = 22/35 (62%) Frame = +1 Query: 274 GVESVKTDTAGNKVVVTGAADAADLKERIEARTKK 378 G+ES+ TDT K+ VT DA +++ +E + K+ Sbjct: 1247 GIESISTDTKEKKLTVTRDVDADEVQLVVEKQRKR 1281 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,269,346 Number of Sequences: 219361 Number of extensions: 656722 Number of successful extensions: 2760 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 2594 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2757 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4585734400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
