Clone Name | bart57f10 |
---|---|
Clone Library Name | barley_pub |
>gb|AC118613.8| Mus musculus chromosome 6, clone RP23-442E2, complete sequence Length = 256556 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 95 ggtgaaagcctctgacccctccatc 119 |||| |||||||||||||||||||| Sbjct: 101850 ggtgcaagcctctgacccctccatc 101874
>gb|AC161147.6| Mus musculus BAC clone RP23-357G12 from chromosome 6, complete sequence Length = 225957 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 95 ggtgaaagcctctgacccctccatc 119 |||| |||||||||||||||||||| Sbjct: 46735 ggtgcaagcctctgacccctccatc 46711
>ref|XM_493873.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1833 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 50 gagtgcaggcaatgggttgcccat 73 |||||||||||||||| ||||||| Sbjct: 295 gagtgcaggcaatggggtgcccat 318
>emb|AJ238613.1|GGA238613 Gallus gallus mRNA for teneurin-1 Length = 8118 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 375 gagctgtggaccctggactgcggc 398 |||||||| ||||||||||||||| Sbjct: 2020 gagctgtgtaccctggactgcggc 2043
>ref|NM_204862.1| Gallus gallus odz, odd Oz/ten-m homolog 1(Drosophila) (ODZ1), mRNA Length = 8118 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 375 gagctgtggaccctggactgcggc 398 |||||||| ||||||||||||||| Sbjct: 2020 gagctgtgtaccctggactgcggc 2043
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 50 gagtgcaggcaatgggttgcccat 73 |||||||||||||||| ||||||| Sbjct: 125991 gagtgcaggcaatggggtgcccat 126014
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 433 cgtacgcggcggaggtgccg 452 |||||||||||||||||||| Sbjct: 8321213 cgtacgcggcggaggtgccg 8321194
>gb|S68356.1|S68356 Aplysia sp. action potential broadening potassium channel (Shab) mRNA, complete cds Length = 3060 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 405 gaggagtcgctcaagaggat 424 |||||||||||||||||||| Sbjct: 2500 gaggagtcgctcaagaggat 2519
>dbj|AK101136.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033026H11, full insert sequence Length = 2750 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 50 gagtgcaggcaatgggttgcccat 73 |||||||||||||||| ||||||| Sbjct: 887 gagtgcaggcaatggggtgcccat 910
>gb|AC084818.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668H12, complete sequence Length = 160603 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 50 gagtgcaggcaatgggttgcccat 73 |||||||||||||||| ||||||| Sbjct: 8179 gagtgcaggcaatggggtgcccat 8202
>gb|AC073405.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0036D10, complete sequence Length = 156772 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 50 gagtgcaggcaatgggttgcccat 73 |||||||||||||||| ||||||| Sbjct: 125991 gagtgcaggcaatggggtgcccat 126014 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,435,227 Number of Sequences: 3902068 Number of extensions: 2435227 Number of successful extensions: 45159 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 45076 Number of HSP's gapped (non-prelim): 83 length of query: 462 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 440 effective length of database: 17,147,199,772 effective search space: 7544767899680 effective search space used: 7544767899680 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)