ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart57e06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 137 bits (69), Expect = 4e-29 Identities = 196/231 (84%), Gaps = 8/231 (3%) Strand = Plus / Minus Query: 218 ccccagctcgcgctccacctgcgcaccccc-gccatg-gtcgccgcgctctacggca-gc 274 ||||| ||||| |||||||||| ||||||| ||||| |||||||| |||||| | || Sbjct: 113937 ccccatctcgcactccacctgcacaccccctgccatttgtcgccgcactctacaaaaagc 113878 Query: 275 accaccgtcctctcc-tacgtcctctccatcgccccctccgaggccgcccgcgcctccgc 333 ||||||||||||||| ||||||||||||||| |||| ||||| ||| ||| |||| || Sbjct: 113877 accaccgtcctctccctacgtcctctccatcacccc-tccgacgcccccc---cctctgc 113822 Query: 334 atccgacggcgccaccccgctcctcctcgcccaccagggccgcgcgccatccgcgcccca 393 |||||||||||||||||||||||||||| |||||||||||||| || ||| ||||| | Sbjct: 113821 ctccgacggcgccaccccgctcctcctcggccaccagggccgcgacccctccccgcccaa 113762 Query: 394 cgccgcacgcctcctcctcaccgccggcgcatcatcgtcctccctactcgc 444 |||| | ||||||||||||| | ||| ||||||||| ||| |||| ||||| Sbjct: 113761 cgccacccgcctcctcctcaacaccgacgcatcatcatcccccctcctcgc 113711 Score = 97.6 bits (49), Expect = 3e-17 Identities = 87/97 (89%), Gaps = 2/97 (2%) Strand = Plus / Minus Query: 335 tccgacggcgccaccccgctcctcctcgcccaccagggccgcg-cgccatcc-gcgcccc 392 |||||||||||||||| ||||||||||| |||||||||||||| | || ||| |||||| Sbjct: 113615 tccgacggcgccaccctgctcctcctcggccaccagggccgcgcccccctccaccgcccc 113556 Query: 393 acgccgcacgcctcctcctcaccgccggcgcatcatc 429 ||||||| |||||||||||| ||||||||||||||| Sbjct: 113555 acgccgccagcctcctcctcagcgccggcgcatcatc 113519 Score = 97.6 bits (49), Expect = 3e-17 Identities = 92/105 (87%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 325 cgcctccgcatccgacggcgccaccccgctcctcctcgcccaccagggccgcgcgccatc 384 |||||| || ||||||| |||||||||||||||||||| || ||| || ||||| || || Sbjct: 113418 cgcctctgcctccgacg-cgccaccccgctcctcctcggcctccacggtcgcgccccctc 113360 Query: 385 cgcgccccacgccgcacgcctcctcctcaccgccggcgcatcatc 429 | ||||||||||||| || |||||||||| ||||||||||||||| Sbjct: 113359 cccgccccacgccgcccgtctcctcctcagcgccggcgcatcatc 113315 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Minus Query: 144 aggacaacctctccctcgtcgccgcatccccgtggtacgggccatcc 190 |||||| |||||||||||| |||| ||||| |||||||| |||||| Sbjct: 114008 aggacagcctctccctcgtgaccgcctccccatggtacggcccatcc 113962
>gb|M22076.1|MZETNMUT Maize Mu transposable element MRS-A Length = 1557 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 238 gcgcacccccgccatggtcgccgcgctctacggcagcac 276 |||||| || ||||||||||||||||||||||||||||| Sbjct: 370 gcgcacgccggccatggtcgccgcgctctacggcagcac 408
>dbj|AP000758.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-775A2, complete sequence Length = 163025 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 192 ccaaatcaaccaacaacaacaaca 215 |||||||||||||||||||||||| Sbjct: 79699 ccaaatcaaccaacaacaacaaca 79676
>gb|DQ490965.1| Mutant Zea mays clone pGR25C22 disrupted DOF1 (Dof1) gene, promoter region and complete cds Length = 12502 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 254 gtcgccgcgctctacggcagcac 276 ||||||||||||||||||||||| Sbjct: 8636 gtcgccgcgctctacggcagcac 8614
>gb|AY301066.1| Transposition vector RescueMu, complete sequence Length = 4739 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 254 gtcgccgcgctctacggcagcac 276 ||||||||||||||||||||||| Sbjct: 211 gtcgccgcgctctacggcagcac 233
>gb|AC132058.5| Rattus norvegicus 18 BAC CH230-229M9 (Children's Hospital Oakland Research Institute) complete sequence Length = 228492 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 189 cccccaaatcaaccaacaacaacaaca 215 |||||||||||| |||||||||||||| Sbjct: 14343 cccccaaatcaaacaacaacaacaaca 14317
>emb|X13019.1|ZMTNMU14 Maize Mu-homologous element Mu1.4.-B37 Length = 1396 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 254 gtcgccgcgctctacggcagcac 276 ||||||||||||||||||||||| Sbjct: 220 gtcgccgcgctctacggcagcac 242
>emb|X00913.1|ZMTEMU1 Maize transposable element Mu1 sequence Length = 1400 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 254 gtcgccgcgctctacggcagcac 276 ||||||||||||||||||||||| Sbjct: 224 gtcgccgcgctctacggcagcac 246
>gb|AF347696.1| Zea mays NADPH-dependent reductase (a1) gene, a1-mum2 allele, complete cds Length = 8154 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 254 gtcgccgcgctctacggcagcac 276 ||||||||||||||||||||||| Sbjct: 5131 gtcgccgcgctctacggcagcac 5109
>gb|AC010705.15|AC010705 Drosophila melanogaster, chromosome X, region 12D-12E, BAC clone BACR28F21, complete sequence Length = 163958 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 203 aacaacaacaacacgccccagct 225 ||||||||||||||||||||||| Sbjct: 6428 aacaacaacaacacgccccagct 6406
>gb|AC011069.7|AC011069 Drosophila melanogaster, chromosome X, region 12B-12C, BAC clone BACR11H20, complete sequence Length = 168384 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 203 aacaacaacaacacgccccagct 225 ||||||||||||||||||||||| Sbjct: 163797 aacaacaacaacacgccccagct 163775
>gb|AE003493.3| Drosophila melanogaster chromosome X, section 45 of 74 of the complete sequence Length = 307761 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 203 aacaacaacaacacgccccagct 225 ||||||||||||||||||||||| Sbjct: 278317 aacaacaacaacacgccccagct 278295
>gb|AF006498.1|AF006498 Zea mays discolored-1 (mutant allele dsc1-Ref::Mu1) gene, partial sequence Length = 3808 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 254 gtcgccgcgctctacggcagcac 276 ||||||||||||||||||||||| Sbjct: 695 gtcgccgcgctctacggcagcac 717
>ref|XM_632615.1| Dictyostelium discoideum hypothetical protein (DDB0186929), partial mRNA Length = 2865 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 194 aaatcaaccaacaacaacaaca 215 |||||||||||||||||||||| Sbjct: 1744 aaatcaaccaacaacaacaaca 1765
>gb|BC017214.2| Homo sapiens BCL2-related ovarian killer, mRNA (cDNA clone IMAGE:4120781), partial cds Length = 2344 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 97 gctcgccgccgacgacgacctc 118 |||||||||||||||||||||| Sbjct: 35 gctcgccgccgacgacgacctc 14
>gb|BC006203.2| Homo sapiens BCL2-related ovarian killer, mRNA (cDNA clone MGC:4631 IMAGE:3528347), complete cds Length = 2344 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 97 gctcgccgccgacgacgacctc 118 |||||||||||||||||||||| Sbjct: 35 gctcgccgccgacgacgacctc 14
>emb|X80906.1|GGVIPMRNA G.gallus mRNA for vasoactive intestinal polypeptide Length = 910 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 340 cggcgccaccccgctcctcctcgccc 365 ||||||| |||||||||||||||||| Sbjct: 135 cggcgcctccccgctcctcctcgccc 160
>ref|NM_032515.3| Homo sapiens BCL2-related ovarian killer (BOK), mRNA Length = 2617 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 97 gctcgccgccgacgacgacctc 118 |||||||||||||||||||||| Sbjct: 165 gctcgccgccgacgacgacctc 144
>emb|CR619343.1| full-length cDNA clone CS0DF007YM20 of Fetal brain of Homo sapiens (human) Length = 1221 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 97 gctcgccgccgacgacgacctc 118 |||||||||||||||||||||| Sbjct: 733 gctcgccgccgacgacgacctc 754
>gb|AY899214.1| Streptomyces aizunensis strain NRRL B-11277 glycosyltransferase, polyketide synthase type Is, acyl transferase, membrane protein, ABC transporter, sugar dehydratase/epimerase, sugar epimerase, sugar nucleotidyltransferase, sugar dehydratase/epimerase, thioesterase, acyl CoA ligase, amine oxidase, phosphopantetheinyl transferase, transcriptional regulator, carboxylase/carboxyltransferase, amidinohydrolase, amide synthetase, 5-aminolevulinate synthase, and acyl CoA ligase genes, complete cds; and unknown gene Length = 161719 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 50 gccatgccaccctccgcccacg 71 |||||||||||||||||||||| Sbjct: 10424 gccatgccaccctccgcccacg 10403
>gb|AC110299.3| Homo sapiens BAC clone RP11-491D2 from 2, complete sequence Length = 81704 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 97 gctcgccgccgacgacgacctc 118 |||||||||||||||||||||| Sbjct: 3303 gctcgccgccgacgacgacctc 3324
>ref|NM_205366.1| Gallus gallus vasoactive intestinal peptide (VIP), mRNA Length = 1028 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 340 cggcgccaccccgctcctcctcgccc 365 ||||||| |||||||||||||||||| Sbjct: 170 cggcgcctccccgctcctcctcgccc 195
>gb|AF174487.1|AF174487 Homo sapiens BCL-2-related ovarian killer protein (BOK) mRNA, complete cds Length = 936 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 97 gctcgccgccgacgacgacctc 118 |||||||||||||||||||||| Sbjct: 60 gctcgccgccgacgacgacctc 39
>gb|U09350.1|GGU09350 Gallus gallus PHI-27 and vasoactive intestinal peptide (VIP) mRNA, complete cds Length = 1028 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 340 cggcgccaccccgctcctcctcgccc 365 ||||||| |||||||||||||||||| Sbjct: 170 cggcgcctccccgctcctcctcgccc 195
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 86 tacctgctcgagctcgccgccgacga 111 ||||||| |||||||||||||||||| Sbjct: 78642 tacctgcacgagctcgccgccgacga 78667
>gb|AC102696.6| Mus musculus chromosome 7, clone RP24-112I14, complete sequence Length = 155408 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 191 cccaaatcaaccaacaacaacaaca 215 |||||| |||||||||||||||||| Sbjct: 22158 cccaaaccaaccaacaacaacaaca 22134
>gb|AC116758.11| Mus musculus chromosome 8, clone RP23-383A10, complete sequence Length = 190294 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 agagcaagagcaagcaagcat 21 ||||||||||||||||||||| Sbjct: 161345 agagcaagagcaagcaagcat 161365
>ref|NM_187534.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1179 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 200 accaacaacaacaacacgccc 220 ||||||||||||||||||||| Sbjct: 839 accaacaacaacaacacgccc 859
>ref|XM_475062.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2811 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 317 gccgcccgcgcctccgcatccgacg 341 |||||||||||||||| |||||||| Sbjct: 361 gccgcccgcgcctccgaatccgacg 385
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 200 accaacaacaacaacacgccc 220 ||||||||||||||||||||| Sbjct: 11947886 accaacaacaacaacacgccc 11947866 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 33 tgcgcaacctcgccgccgcca 53 ||||||||||||||||||||| Sbjct: 11224141 tgcgcaacctcgccgccgcca 11224161 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 92 ctcgagctcgccgccgacgacgac 115 |||||||||||||| ||||||||| Sbjct: 27718143 ctcgagctcgccgcggacgacgac 27718166 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 gctcgccgccgacgacgacc 116 |||||||||||||||||||| Sbjct: 20747631 gctcgccgccgacgacgacc 20747612
>gb|AC134609.4| Mus musculus BAC clone RP23-69L14 from chromosome 7, complete sequence Length = 139760 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 caacaacaacaacacgcccca 222 ||||||||||||||||||||| Sbjct: 13079 caacaacaacaacacgcccca 13099
>gb|AC128738.4| Mus musculus BAC clone RP24-106M4 from chromosome 7, complete sequence Length = 148567 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 caacaacaacaacacgcccca 222 ||||||||||||||||||||| Sbjct: 122352 caacaacaacaacacgcccca 122372
>gb|AC130841.4| Mus musculus BAC clone RP24-445L16 from chromosome 8, complete sequence Length = 174384 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 agagcaagagcaagcaagcat 21 ||||||||||||||||||||| Sbjct: 61105 agagcaagagcaagcaagcat 61125
>gb|AC145491.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAb0085H08, from chromosome 3, complete sequence Length = 130656 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 33 tgcgcaacctcgccgccgcca 53 ||||||||||||||||||||| Sbjct: 3094 tgcgcaacctcgccgccgcca 3114
>gb|AC087828.6| Homo sapiens chromosome 15, clone RP11-292P13, complete sequence Length = 185324 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 191 cccaaatcaaccaacaacaacaaca 215 |||||||||| |||||||||||||| Sbjct: 54478 cccaaatcaaacaacaacaacaaca 54454
>gb|AC171134.2| Helobdella robusta clone CH306-1A5, complete sequence Length = 95814 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 195 aatcaaccaacaacaacaaca 215 ||||||||||||||||||||| Sbjct: 82581 aatcaaccaacaacaacaaca 82561
>gb|AC118669.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0011G21, from chromosome 3, complete sequence Length = 142401 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 33 tgcgcaacctcgccgccgcca 53 ||||||||||||||||||||| Sbjct: 137498 tgcgcaacctcgccgccgcca 137518
>gb|AC122108.2| Homo sapiens chromosome 15 clone CTD-2008A1 map 15q21.1, complete sequence Length = 141944 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 191 cccaaatcaaccaacaacaacaaca 215 |||||||||| |||||||||||||| Sbjct: 38150 cccaaatcaaacaacaacaacaaca 38126
>gb|AC118340.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0085H08, from chromosome 3, complete sequence Length = 126708 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 tgcgcaacctcgccgccgcca 53 ||||||||||||||||||||| Sbjct: 56907 tgcgcaacctcgccgccgcca 56887
>gb|AC091245.2| Homo sapiens chromosome 15 clone RP11-456H13 map 15q15, complete sequence Length = 194311 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 191 cccaaatcaaccaacaacaacaaca 215 |||||||||| |||||||||||||| Sbjct: 10572 cccaaatcaaacaacaacaacaaca 10548
>gb|AC018901.8| Homo sapiens chromosome 15 clone RP11-292P13 map 15q15, complete sequence Length = 199503 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 191 cccaaatcaaccaacaacaacaaca 215 |||||||||| |||||||||||||| Sbjct: 68631 cccaaatcaaacaacaacaacaaca 68607
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 42 tcgccgccgccatgccaccctccgc 66 |||||| |||||||||||||||||| Sbjct: 23693123 tcgccggcgccatgccaccctccgc 23693147
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 317 gccgcccgcgcctccgcatccgacg 341 |||||||||||||||| |||||||| Sbjct: 188129 gccgcccgcgcctccgaatccgacg 188153 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 cctcctcctcaccgccggcg 422 |||||||||||||||||||| Sbjct: 29331245 cctcctcctcaccgccggcg 29331226
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 200 accaacaacaacaacacgccc 220 ||||||||||||||||||||| Sbjct: 11944649 accaacaacaacaacacgccc 11944629 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 33 tgcgcaacctcgccgccgcca 53 ||||||||||||||||||||| Sbjct: 11220904 tgcgcaacctcgccgccgcca 11220924 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 92 ctcgagctcgccgccgacgacgac 115 |||||||||||||| ||||||||| Sbjct: 27809466 ctcgagctcgccgcggacgacgac 27809489 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 gctcgccgccgacgacgacc 116 |||||||||||||||||||| Sbjct: 20740660 gctcgccgccgacgacgacc 20740641
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 100 cgccgccgacgacgacctccccgcc 124 ||||||||||||||||| ||||||| Sbjct: 1696316 cgccgccgacgacgacccccccgcc 1696340 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 cgccgccgacgacgacctcc 119 |||||||||||||||||||| Sbjct: 2903582 cgccgccgacgacgacctcc 2903563
>gb|AE004840.1| Pseudomonas aeruginosa PAO1, section 401 of 529 of the complete genome Length = 10481 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 364 ccaccagggccgcgcgccatccgcg 388 ||||||| ||||||||||||||||| Sbjct: 1368 ccaccagcgccgcgcgccatccgcg 1392
>dbj|AP004997.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030G11 Length = 143943 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 100 cgccgccgacgacgacctccccgcc 124 ||||||||||||||||| ||||||| Sbjct: 14328 cgccgccgacgacgacccccccgcc 14352
>dbj|AP005446.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0029C06 Length = 156500 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 42 tcgccgccgccatgccaccctccgc 66 |||||| |||||||||||||||||| Sbjct: 41199 tcgccggcgccatgccaccctccgc 41223
>emb|AJ001317.1|HVHOTR1 Hordeum vulgare Hotr1 gene Length = 9665 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 195 aatcaaccaacaacaacaaca 215 ||||||||||||||||||||| Sbjct: 4418 aatcaaccaacaacaacaaca 4438
>dbj|AK105679.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-B03, full insert sequence Length = 3336 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 317 gccgcccgcgcctccgcatccgacg 341 |||||||||||||||| |||||||| Sbjct: 474 gccgcccgcgcctccgaatccgacg 498
>dbj|AK103271.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124H21, full insert sequence Length = 3259 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 317 gccgcccgcgcctccgcatccgacg 341 |||||||||||||||| |||||||| Sbjct: 414 gccgcccgcgcctccgaatccgacg 438
>dbj|AK070887.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064O22, full insert sequence Length = 1506 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 100 cgccgccgacgacgacctccccgcc 124 ||||||||||||||||| ||||||| Sbjct: 830 cgccgccgacgacgacccccccgcc 806
>emb|CT025735.16| Mouse DNA sequence from clone RP24-338F19 on chromosome 12, complete sequence Length = 165439 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 195 aatcaaccaacaacaacaaca 215 ||||||||||||||||||||| Sbjct: 121243 aatcaaccaacaacaacaaca 121263
>gb|AC138678.24| Mus musculus chromosome 7, clone RP23-18B20, complete sequence Length = 205257 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 caacaacaacaacacgcccca 222 ||||||||||||||||||||| Sbjct: 34645 caacaacaacaacacgcccca 34665
>gb|AC147232.4| Mus musculus BAC clone RP23-311C15 from 7, complete sequence Length = 191521 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 caacaacaacaacacgcccca 222 ||||||||||||||||||||| Sbjct: 171798 caacaacaacaacacgcccca 171818
>gb|AC126222.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0014I10, complete sequence Length = 113946 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 200 accaacaacaacaacacgccc 220 ||||||||||||||||||||| Sbjct: 49148 accaacaacaacaacacgccc 49128
>gb|AC084818.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668H12, complete sequence Length = 160603 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 317 gccgcccgcgcctccgcatccgacg 341 |||||||||||||||| |||||||| Sbjct: 70313 gccgcccgcgcctccgaatccgacg 70337
>dbj|AB072568.1| Streptomyces virginiae visA, visB, visC, visD genes for L-lysin 2-aminotransferase, 3-hydroxypicolinic acid:AMP ligase, lysine cyclodeaminase, cytochrome P450 monooxygenase, complete cds Length = 6629 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 102 ccgccgacgacgacctccccg 122 ||||||||||||||||||||| Sbjct: 5898 ccgccgacgacgacctccccg 5878
>gb|AY792858.1| Valeriana procera internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 623 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 381 catccgcgccccacgccgcacgcc 404 |||||||||||| ||||||||||| Sbjct: 455 catccgcgccccccgccgcacgcc 432
>gb|AY792856.1| Valeriana polemonioides internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 640 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 383 tccgcgccccacgccgcacgcctc 406 |||||||||| ||||||||||||| Sbjct: 470 tccgcgccccccgccgcacgcctc 447
>ref|NM_184149.1| Oryza sativa (japonica cultivar-group), mRNA Length = 438 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 100 cgccgccgacgacgacctccccgccttc 127 |||||||| ||||||||||| ||||||| Sbjct: 90 cgccgccggcgacgacctcctcgccttc 63
>ref|XM_635510.1| Dictyostelium discoideum hypothetical protein (DDB0204630), partial mRNA Length = 2943 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 ccaaatcaaccaacaacaacaaca 215 ||||||||| |||||||||||||| Sbjct: 1918 ccaaatcaaacaacaacaacaaca 1941
>ref|XM_635412.1| Dictyostelium discoideum TRRAP protein (DDB0229338), partial mRNA Length = 13530 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 atcaaccaacaacaacaaca 215 |||||||||||||||||||| Sbjct: 8836 atcaaccaacaacaacaaca 8855
>ref|XM_630469.1| Dictyostelium discoideum hypothetical protein (DDB0219603), partial mRNA Length = 5247 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 ccaaatcaaccaacaacaacaaca 215 |||||||||| ||||||||||||| Sbjct: 2812 ccaaatcaacaaacaacaacaaca 2835
>ref|NM_188998.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1292 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 tggcctgcgcaacctcgccg 47 |||||||||||||||||||| Sbjct: 414 tggcctgcgcaacctcgccg 395
>ref|XM_463001.1| Oryza sativa (japonica cultivar-group), mRNA Length = 576 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 gctcgccgccgacgacgacc 116 |||||||||||||||||||| Sbjct: 288 gctcgccgccgacgacgacc 269
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 99 tcgccgccgacgacgacctccccg 122 ||||||||||| |||||||||||| Sbjct: 327978 tcgccgccgacaacgacctccccg 327955
>ref|XM_469392.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2841 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 92 ctcgagctcgccgccgacgacgac 115 |||||||||||||| ||||||||| Sbjct: 166 ctcgagctcgccgcggacgacgac 189
>gb|AC138197.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0055D24 map C535, complete sequence Length = 174759 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 cctcctcctcaccgccggcg 422 |||||||||||||||||||| Sbjct: 139544 cctcctcctcaccgccggcg 139563
>gb|DQ195081.1| Oryza sativa (indica cultivar-group) putative leucine-rich repeat receptor-like kinase gene cluster, complete sequence; ternary complex factor MIP1-like gene, complete cds; putative membrane-associated protein and gag-pol precursor, pseudogenes, complete sequence; and unknown genes Length = 94077 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cgccgccgacgacgacctcc 119 |||||||||||||||||||| Sbjct: 72577 cgccgccgacgacgacctcc 72596
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 gctcgccgccgacgacgacc 116 |||||||||||||||||||| Sbjct: 1683113 gctcgccgccgacgacgacc 1683132
>gb|AC119822.38| Mus musculus chromosome 13, clone RP23-202P22, complete sequence Length = 213736 Score = 40.1 bits (20), Expect = 6.4 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 188 tcccccaaatcaaccaacaacaacaaca 215 |||||||||| ||||||||||||||||| Sbjct: 112594 tcccccaaat-aaccaacaacaacaaca 112568
>gb|AC182395.3| Pan troglodytes BAC clone CH251-484N21 from chromosome 2, complete sequence Length = 176398 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 193 caaatcaaccaacaacaacaacac 216 |||||||| ||||||||||||||| Sbjct: 47222 caaatcaatcaacaacaacaacac 47199
>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08, complete sequence Length = 142196 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 cctcctcctcaccgccggcg 422 |||||||||||||||||||| Sbjct: 109902 cctcctcctcaccgccggcg 109883
>gb|AY756174.4| Oryza rufipogon putative leucine-rich repeat receptor-like kinases and ternary complex factor MIP1-like genes, complete cds; retrotransposon putative membrane-associated protein and gag-pol precursor, pseudogenes, complete sequence; and unknown genes Length = 102522 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cgccgccgacgacgacctcc 119 |||||||||||||||||||| Sbjct: 80996 cgccgccgacgacgacctcc 81015
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 ctccccgccttccgccgcgc 135 |||||||||||||||||||| Sbjct: 405969 ctccccgccttccgccgcgc 405950
>emb|CR956430.2| M.truncatula DNA sequence from clone MTH2-49I19 on chromosome 3, complete sequence Length = 97738 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 aatcaaccaacaacaacaac 214 |||||||||||||||||||| Sbjct: 36906 aatcaaccaacaacaacaac 36925
>gb|AC123053.4| Mus musculus BAC clone RP24-374O20 from chromosome 7, complete sequence Length = 184618 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 caacaacaacaacacgcccc 221 |||||||||||||||||||| Sbjct: 28258 caacaacaacaacacgcccc 28239
>gb|AC124500.5| Mus musculus BAC clone RP24-69C19 from chromosome 6, complete sequence Length = 190224 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 atcaaccaacaacaacaaca 215 |||||||||||||||||||| Sbjct: 146856 atcaaccaacaacaacaaca 146837
>gb|AC127329.3| Mus musculus BAC clone RP23-260A24 from 8, complete sequence Length = 183639 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 ccaaatcaaccaacaacaacaaca 215 ||||| |||||||||||||||||| Sbjct: 106832 ccaaaccaaccaacaacaacaaca 106855
>gb|AC140022.11| Medicago truncatula clone mth2-11g20, complete sequence Length = 104305 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 atcaaccaacaacaacaaca 215 |||||||||||||||||||| Sbjct: 75935 atcaaccaacaacaacaaca 75916
>emb|AL442635.11| Human DNA sequence from clone RP11-259F16 on chromosome 10 Contains the PRG1 gene for proteoglycan 1, secretory granule (PPG, PRG, SERGLYCIN), the 5' end of the VPS26 gene for vacuolar protein sorting 26 (yeast) (HB58, Hbeta58, FLJ12930), a ribosomal protein S12 (RPS12) pseudogene and a CpG island, complete sequence Length = 143093 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 gaggacaacctctccctcgt 162 |||||||||||||||||||| Sbjct: 59182 gaggacaacctctccctcgt 59201
>emb|AL023799.5|HS322P7 Human DNA sequence from clone RP3-322P7 on chromosome Xq25-26.2 Contains the 5' end of a novel gene (FLJ20095) and a CpG island, complete sequence Length = 93705 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 279 ccgtcctctcctacgtcctctcca 302 |||||||||||| ||||||||||| Sbjct: 64453 ccgtcctctcctccgtcctctcca 64430
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 ctgcgcacccccgccatggt 255 |||||||||||||||||||| Sbjct: 2190038 ctgcgcacccccgccatggt 2190019
>emb|BX842576.1| Mycobacterium tuberculosis H37Rv complete genome; segment 5/13 Length = 348264 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 gctcgccgccgacgacgacc 116 |||||||||||||||||||| Sbjct: 299914 gctcgccgccgacgacgacc 299933
>emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genome; segment 3/16 Length = 349260 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 cgagctcgccgccgacgacg 113 |||||||||||||||||||| Sbjct: 335902 cgagctcgccgccgacgacg 335921
>emb|BX248339.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 6/14 Length = 300050 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 gctcgccgccgacgacgacc 116 |||||||||||||||||||| Sbjct: 65703 gctcgccgccgacgacgacc 65722
>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29 Length = 292200 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 105 ccgacgacgacctccccgccttcc 128 |||| ||||||||||||||||||| Sbjct: 198668 ccgaggacgacctccccgccttcc 198691
>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29 Length = 290850 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 cgacctccccgccttccgcc 131 |||||||||||||||||||| Sbjct: 10066 cgacctccccgccttccgcc 10085
>emb|AJ007731.1|SCO007731 Streptomyces coelicolor scbR gene, scbA gene, ORFs A,B,X & Z Length = 6727 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 cgacctccccgccttccgcc 131 |||||||||||||||||||| Sbjct: 4941 cgacctccccgccttccgcc 4922
>gb|AC163890.2| Glomus intraradices clone JGIATSX-5N24, complete sequence Length = 41409 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 caacaacaacaacacgcccc 221 |||||||||||||||||||| Sbjct: 11241 caacaacaacaacacgcccc 11260
>dbj|AK061855.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-F12, full insert sequence Length = 1612 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 cctcctcctcaccgccggcg 422 |||||||||||||||||||| Sbjct: 51 cctcctcctcaccgccggcg 70
>gb|AC122175.9| Pan troglodytes clone rp43-99g12, complete sequence Length = 196097 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 193 caaatcaaccaacaacaacaacac 216 |||||||| ||||||||||||||| Sbjct: 28945 caaatcaatcaacaacaacaacac 28922
>gb|AC122731.16| Pan troglodytes clone rp43-14d7, complete sequence Length = 166903 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 193 caaatcaaccaacaacaacaacac 216 |||||||| ||||||||||||||| Sbjct: 92588 caaatcaatcaacaacaacaacac 92611
>dbj|AK222372.1| Ciona intestinalis cDNA, clone:cieg090m16, full insert sequence Length = 2227 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 accaacaacaacaacacgcc 219 |||||||||||||||||||| Sbjct: 1124 accaacaacaacaacacgcc 1143
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 356 ctcctcgcccaccagggccgcgcg 379 |||||||||||||||| ||||||| Sbjct: 513387 ctcctcgcccaccaggtccgcgcg 513410
>gb|AC134887.4| Oryza sativa chromosome 3 BAC OSJNBa0029P07 genomic sequence, complete sequence Length = 142047 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 gctcgccgccgacgacgacc 116 |||||||||||||||||||| Sbjct: 37741 gctcgccgccgacgacgacc 37722
>gb|AY224442.1| Oryza sativa (japonica cultivar-group) isolate 22866 putative vacuolar ATP synthase subunit C mRNA, partial cds Length = 1227 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 cctcctcctcaccgccggcg 422 |||||||||||||||||||| Sbjct: 81 cctcctcctcaccgccggcg 100
>gb|AC134845.5| Mus musculus BAC clone RP24-424K5 from chromosome 1, complete sequence Length = 194449 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 192 ccaaatcaaccaacaacaacaaca 215 ||||| |||||||||||||||||| Sbjct: 87267 ccaaaacaaccaacaacaacaaca 87244
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 109 cgacgacctccccgccttccgccgcgccgtcc 140 |||||||||| || ||||||||||||||||| Sbjct: 26398548 cgacgacctcgccctcttccgccgcgccgtcc 26398517
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 cctcctcctcaccgccggcg 422 |||||||||||||||||||| Sbjct: 8878683 cctcctcctcaccgccggcg 8878664
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 cgccgccgacgacgacctcc 119 |||||||||||||||||||| Sbjct: 918173 cgccgccgacgacgacctcc 918154
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 tggcctgcgcaacctcgccg 47 |||||||||||||||||||| Sbjct: 25582672 tggcctgcgcaacctcgccg 25582691
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 100 cgccgccgacgacgacctccccgccttc 127 |||||||| ||||||||||| ||||||| Sbjct: 1222696 cgccgccggcgacgacctcctcgccttc 1222723
>dbj|AB210637.1| Ciona intestinalis Ci-pem4 mRNA, complete cds, clone: cibd038f11 Length = 2215 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 accaacaacaacaacacgcc 219 |||||||||||||||||||| Sbjct: 1124 accaacaacaacaacacgcc 1143
>gb|AC153559.4| Mus musculus 10 BAC RP23-86P1 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 185708 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 ccaaatcaaccaacaacaacaaca 215 ||||||||| |||||||||||||| Sbjct: 105191 ccaaatcaaacaacaacaacaaca 105214
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 tcgccgccgacgacgacctc 118 |||||||||||||||||||| Sbjct: 6780877 tcgccgccgacgacgacctc 6780896
>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete sequence Length = 119329 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 92 ctcgagctcgccgccgacgacgac 115 |||||||||||||| ||||||||| Sbjct: 95751 ctcgagctcgccgcggacgacgac 95728
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 cgccgacgacgacctccccg 122 |||||||||||||||||||| Sbjct: 1834020 cgccgacgacgacctccccg 1834001
>gb|AC147927.3| Ovis aries clone CH243-129I22, complete sequence Length = 187152 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 aaatcaaccaacaacaacaa 213 |||||||||||||||||||| Sbjct: 154893 aaatcaaccaacaacaacaa 154912
>dbj|AP005709.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0646B04 Length = 178896 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 cgccgccgacgacgacctcc 119 |||||||||||||||||||| Sbjct: 82300 cgccgccgacgacgacctcc 82281
>dbj|AP003046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0445D12 Length = 140952 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 100 cgccgccgacgacgacctccccgccttc 127 |||||||| ||||||||||| ||||||| Sbjct: 16350 cgccgccggcgacgacctcctcgccttc 16377
>dbj|AP002487.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684C01 Length = 78600 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 100 cgccgccgacgacgacctccccgccttc 127 |||||||| ||||||||||| ||||||| Sbjct: 76999 cgccgccggcgacgacctcctcgccttc 77026
>dbj|AP007224.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0463E12 Length = 161081 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 cgccgccgacgacgacctcc 119 |||||||||||||||||||| Sbjct: 29221 cgccgccgacgacgacctcc 29202
>dbj|AP004761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0686C03 Length = 164529 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 tggcctgcgcaacctcgccg 47 |||||||||||||||||||| Sbjct: 69363 tggcctgcgcaacctcgccg 69382
>dbj|AK120638.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153K17, full insert sequence Length = 3505 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 92 ctcgagctcgccgccgacgacgac 115 |||||||||||||| ||||||||| Sbjct: 804 ctcgagctcgccgcggacgacgac 827
>dbj|AK110967.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-B07, full insert sequence Length = 1553 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 cctcctcctcaccgccggcg 422 |||||||||||||||||||| Sbjct: 34 cctcctcctcaccgccggcg 53
>dbj|AK103499.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033131B09, full insert sequence Length = 1714 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cgccgccgacgacgacctcc 119 |||||||||||||||||||| Sbjct: 210 cgccgccgacgacgacctcc 229
>dbj|AK100119.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007J10, full insert sequence Length = 1681 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 cctcctcctcaccgccggcg 422 |||||||||||||||||||| Sbjct: 56 cctcctcctcaccgccggcg 75
>dbj|AK073007.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143M19, full insert sequence Length = 1475 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cgccgccgacgacgacctcc 119 |||||||||||||||||||| Sbjct: 171 cgccgccgacgacgacctcc 190
>ref|NM_208841.1| Eremothecium gossypii ACR086Cp (ACR086C), mRNA Length = 2433 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 356 ctcctcgcccaccagggccgcgcg 379 |||||||||||||||| ||||||| Sbjct: 1014 ctcctcgcccaccaggtccgcgcg 991
>dbj|AK068456.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013152E20, full insert sequence Length = 2911 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 cctcctcctcaccgccggcg 422 |||||||||||||||||||| Sbjct: 23 cctcctcctcaccgccggcg 42
>dbj|AK064859.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000H14, full insert sequence Length = 3546 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 cctcctcctcaccgccggcg 422 |||||||||||||||||||| Sbjct: 28 cctcctcctcaccgccggcg 47
>dbj|AK061787.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-E10, full insert sequence Length = 1292 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 tggcctgcgcaacctcgccg 47 |||||||||||||||||||| Sbjct: 414 tggcctgcgcaacctcgccg 395
>emb|CT025561.11| Mouse DNA sequence from clone RP23-308G10 on chromosome 9, complete sequence Length = 224154 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 192 ccaaatcaaccaacaacaacaaca 215 ||||||||| |||||||||||||| Sbjct: 85512 ccaaatcaaacaacaacaacaaca 85489
>gb|AC158127.3| Mus musculus chromosome 19, clone RP23-135N12, complete sequence Length = 217544 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 aatcaaccaacaacaacaac 214 |||||||||||||||||||| Sbjct: 67447 aatcaaccaacaacaacaac 67466
>emb|AL928889.14| Mouse DNA sequence from clone RP23-271L22 on chromosome 2, complete sequence Length = 197191 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 atcaaccaacaacaacaaca 215 |||||||||||||||||||| Sbjct: 188818 atcaaccaacaacaacaaca 188837
>emb|CT027588.10| Mouse DNA sequence from clone RP23-461P14 on chromosome 9, complete sequence Length = 182404 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 ccaaatcaaccaacaacaacaaca 215 ||||| |||||||||||||||||| Sbjct: 34943 ccaaaacaaccaacaacaacaaca 34966
>dbj|AK113491.1| Ciona intestinalis cDNA, clone:ciad061l12, full insert sequence Length = 1273 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 accaacaacaacaacacgcc 219 |||||||||||||||||||| Sbjct: 184 accaacaacaacaacacgcc 203
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 cctgcgcaacctcgccgccg 50 |||||||||||||||||||| Sbjct: 2107303 cctgcgcaacctcgccgccg 2107284
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 cctcctcctcaccgccggcg 422 |||||||||||||||||||| Sbjct: 8950346 cctcctcctcaccgccggcg 8950327
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 109 cgacgacctccccgccttccgccgcgccgtcc 140 |||||||||| || ||||||||||||||||| Sbjct: 26326717 cgacgacctcgccctcttccgccgcgccgtcc 26326686
>emb|AL845347.4|CNS08CB9 Oryza sativa chromosome 12, . BAC OSJNBb0101I10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131689 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 109 cgacgacctccccgccttccgccgcgccgtcc 140 |||||||||| || ||||||||||||||||| Sbjct: 112821 cgacgacctcgccctcttccgccgcgccgtcc 112790
>emb|AL732532.4|CNS08C97 Oryza sativa chromosome 12, . BAC OSJNBa0027I07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146366 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 109 cgacgacctccccgccttccgccgcgccgtcc 140 |||||||||| || ||||||||||||||||| Sbjct: 143528 cgacgacctcgccctcttccgccgcgccgtcc 143559
>gb|AC135635.5| Mus musculus BAC clone RP23-245M20 from 3, complete sequence Length = 192485 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 agagcaagagcaagcaagca 20 |||||||||||||||||||| Sbjct: 40069 agagcaagagcaagcaagca 40088
>tpd|BR000053.1| TPA: TPA_exp: Ciona intestinalis Ci-pem4 mRNA for zinc finger protein, partial cds Length = 2252 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 accaacaacaacaacacgcc 219 |||||||||||||||||||| Sbjct: 1175 accaacaacaacaacacgcc 1194
>gb|AD000001.1|MSGY456 Mycobacterium tuberculosis sequence from clone y456 Length = 37316 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 gctcgccgccgacgacgacc 116 |||||||||||||||||||| Sbjct: 30402 gctcgccgccgacgacgacc 30383
>gb|AD000015.1|MSGY175 Mycobacterium tuberculosis sequence from clone y175 Length = 18106 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 gctcgccgccgacgacgacc 116 |||||||||||||||||||| Sbjct: 1625 gctcgccgccgacgacgacc 1644
>gb|AC108836.23| Mus musculus chromosome 19, clone RP23-276L15, complete sequence Length = 196065 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 aatcaaccaacaacaacaac 214 |||||||||||||||||||| Sbjct: 178007 aatcaaccaacaacaacaac 178026
>gb|M90058.1|HUMSERG Human serglycin gene, exons 1,2, and 3 Length = 18550 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 gaggacaacctctccctcgt 162 |||||||||||||||||||| Sbjct: 725 gaggacaacctctccctcgt 744 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,767,873 Number of Sequences: 3902068 Number of extensions: 4767873 Number of successful extensions: 461879 Number of sequences better than 10.0: 140 Number of HSP's better than 10.0 without gapping: 144 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 457365 Number of HSP's gapped (non-prelim): 4519 length of query: 472 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 450 effective length of database: 17,147,199,772 effective search space: 7716239897400 effective search space used: 7716239897400 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
