ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart57d04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_195054.1| Oryza sativa (japonica cultivar-group) hypothet... 50 0.009
2gb|AC090488.3| Genomic sequence for Oryza sativa, Nipponbare str... 50 0.009
3dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.009
4dbj|AK107891.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.009
5gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 50 0.009
6emb|CR385081.7| Zebrafish DNA sequence from clone CH211-59O9 in ... 46 0.14
7gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, comple... 44 0.57
8gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, comple... 44 0.57
9ref|XM_482531.1| Oryza sativa (japonica cultivar-group), mRNA 42 2.3
10gb|AY022889.1| Oryza sativa microsatellite MRG5214 containing (C... 42 2.3
11gb|AY022820.1| Oryza sativa microsatellite MRG5145 containing (C... 42 2.3
12gb|AC126807.4| Mus musculus BAC clone RP23-306D4 from chromosome... 42 2.3
13gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome 42 2.3
14dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 42 2.3
15gb|AF283880.1|AF283880 Raymunida elegantissima REL6 cytochrome o... 42 2.3
16gb|AF283879.1|AF283879 Raymunida elegantissima REL5 cytochrome o... 42 2.3
17gb|AF283878.1|AF283878 Raymunida elegantissima REL4 cytochrome o... 42 2.3
18gb|AF283877.1|AF283877 Raymunida elegantissima REL3 cytochrome o... 42 2.3
19gb|AF283876.1|AF283876 Raymunida elegantissima REL2 cytochrome o... 42 2.3
20gb|AF283875.1|AF283875 Raymunida elegantissima REL1 cytochrome o... 42 2.3
21dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
22dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
23gb|AC131005.3| Homo sapiens 3 BAC RP11-88K11 (Roswell Park Cance... 42 2.3
24dbj|AP003868.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
25dbj|AP004744.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
26emb|AL939130.1|SCO939130 Streptomyces coelicolor A3(2) complete ... 42 2.3
27gb|AC104713.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.9
28ref|XM_480163.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.9
29ref|XM_475811.1| Oryza sativa (japonica cultivar-group), predic... 40 8.9
30ref|NM_187660.1| Oryza sativa (japonica cultivar-group), predic... 40 8.9
31gb|AC099009.2| Drosophila melanogaster clone BACR17M11, complete... 40 8.9
32gb|AC136223.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.9
33ref|NM_173602.2| Homo sapiens DIP2 disco-interacting protein 2 h... 40 8.9
34gb|AF440781.1| Streptomyces cinnamonensis polyether antibiotic m... 40 8.9
35gb|BT025098.1| Drosophila melanogaster IP12358 full insert cDNA 40 8.9
36emb|AL603844.7| Human DNA sequence from clone RP11-541I21 on chr... 40 8.9
37emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, ... 40 8.9
38emb|BX842572.1| Mycobacterium tuberculosis H37Rv complete genome... 40 8.9
39emb|BX248334.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 8.9
40emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete ... 40 8.9
41emb|AL663001.3|OSJN00197 Oryza sativa genomic DNA, chromosome 4,... 40 8.9
42emb|AJ428529.1|AEV428529 Azoarcus evansii bzdN gene, bzdO gene, ... 40 8.9
43dbj|AP004611.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
44dbj|AK091597.1| Homo sapiens cDNA FLJ34278 fis, clone FEBRA2003822 40 8.9
45ref|NM_136670.2| Drosophila melanogaster CG1776-RA (CG1776), mRNA 40 8.9
46gb|AY060726.1| Drosophila melanogaster GH17420 full length cDNA 40 8.9
47gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 8.9
48dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
49dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
50dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
51gb|AC090058.21| Homo sapiens 12 BAC RP11-112N23 (Roswell Park Ca... 40 8.9
52gb|AC015973.2|AC015973 Homo sapiens BAC clone RP11-366C6 from Y,... 40 8.9
53gb|AC104463.3| Homo sapiens chromosome 1 clone RP11-569A11, comp... 40 8.9
54dbj|AP006233.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
55dbj|AP003905.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
56ref|XM_321040.2| Anopheles gambiae str. PEST ENSANGP00000022463 ... 40 8.9
57dbj|AK105115.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.9
58dbj|AK101531.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.9
59dbj|AK101190.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.9
60dbj|AK070077.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.9
61dbj|AK068565.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.9
62gb|AE003832.4| Drosophila melanogaster chromosome 2R, section 18... 40 8.9
63dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complet... 40 8.9
64gb|AC005894.1|AC005894 Drosophila melanogaster, chromosome 2R, r... 40 8.9 
>ref|NM_195054.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBb0081F12.15), mRNA
          Length = 372

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 349 tcaaggtcgccgagatggacctcccctgcatga 381
           ||||| ||||||| |||||||||||||||||||
Sbjct: 260 tcaagatcgccgacatggacctcccctgcatga 292
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>gb|AC090488.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0081F12 from chromosome 10, complete sequence
          Length = 128388

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                              
Query: 349   tcaaggtcgccgagatggacctcccctgcatga 381
             ||||| ||||||| |||||||||||||||||||
Sbjct: 70195 tcaagatcgccgacatggacctcccctgcatga 70227
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                
Query: 349     tcaaggtcgccgagatggacctcccctgcatga 381
               ||||| ||||||| |||||||||||||||||||
Sbjct: 4408587 tcaagatcgccgacatggacctcccctgcatga 4408619
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>dbj|AK107891.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-E07, full
           insert sequence
          Length = 515

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 349 tcaaggtcgccgagatggacctcccctgcatga 381
           ||||| ||||||| |||||||||||||||||||
Sbjct: 240 tcaagatcgccgacatggacctcccctgcatga 272
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                
Query: 349     tcaaggtcgccgagatggacctcccctgcatga 381
               ||||| ||||||| |||||||||||||||||||
Sbjct: 4409408 tcaagatcgccgacatggacctcccctgcatga 4409440
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>emb|CR385081.7| Zebrafish DNA sequence from clone CH211-59O9 in linkage group 25,
             complete sequence
          Length = 182806

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 36    ggtttgtgtattcccccactagctagc 62
             |||||||| ||||||||||||||||||
Sbjct: 16212 ggtttgtgaattcccccactagctagc 16238
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>gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, complete genome
          Length = 156789

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 134    gctcatggcgacggcggcggcg 155
              ||||||||||||||||||||||
Sbjct: 152429 gctcatggcgacggcggcggcg 152408



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 134    gctcatggcgacggcggcggcg 155
              ||||||||||||||||||||||
Sbjct: 129995 gctcatggcgacggcggcggcg 130016
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>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome
          Length = 156487

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 134    gctcatggcgacggcggcggcg 155
              ||||||||||||||||||||||
Sbjct: 152253 gctcatggcgacggcggcggcg 152232



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 134    gctcatggcgacggcggcggcg 155
              ||||||||||||||||||||||
Sbjct: 131050 gctcatggcgacggcggcggcg 131071
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>ref|XM_482531.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 273

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 139 tggcgacggcggcggcgtacg 159
           |||||||||||||||||||||
Sbjct: 94  tggcgacggcggcggcgtacg 74
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>gb|AY022889.1| Oryza sativa microsatellite MRG5214 containing (CGG)X9, genomic
           sequence
          Length = 227

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 135 ctcatggcgacggcggcggcg 155
           |||||||||||||||||||||
Sbjct: 91  ctcatggcgacggcggcggcg 111
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>gb|AY022820.1| Oryza sativa microsatellite MRG5145 containing (CGC)X9, genomic
           sequence
          Length = 227

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 135 ctcatggcgacggcggcggcg 155
           |||||||||||||||||||||
Sbjct: 139 ctcatggcgacggcggcggcg 119
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>gb|AC126807.4| Mus musculus BAC clone RP23-306D4 from chromosome 18, complete sequence
          Length = 244566

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 283    aggtggagcgggaggtggaga 303
              |||||||||||||||||||||
Sbjct: 177964 aggtggagcgggaggtggaga 177944
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>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 413     atggccttggccgcctgcgtc 433
               |||||||||||||||||||||
Sbjct: 1331762 atggccttggccgcctgcgtc 1331782
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 281    cgaggtggagcgggaggtggagatc 305
              |||||||||||||| ||||||||||
Sbjct: 870255 cgaggtggagcgggcggtggagatc 870279
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>gb|AF283880.1|AF283880 Raymunida elegantissima REL6 cytochrome oxidase subunit I (COI)
           gene, partial cds; mitochondrial gene for mitochondrial
           product
          Length = 657

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 289 agcgggaggtggagatccagt 309
           |||||||||||||||||||||
Sbjct: 618 agcgggaggtggagatccagt 638
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>gb|AF283879.1|AF283879 Raymunida elegantissima REL5 cytochrome oxidase subunit I (COI)
           gene, partial cds; mitochondrial gene for mitochondrial
           product
          Length = 657

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 289 agcgggaggtggagatccagt 309
           |||||||||||||||||||||
Sbjct: 618 agcgggaggtggagatccagt 638
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>gb|AF283878.1|AF283878 Raymunida elegantissima REL4 cytochrome oxidase subunit I (COI)
           gene, partial cds; mitochondrial gene for mitochondrial
           product
          Length = 657

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 289 agcgggaggtggagatccagt 309
           |||||||||||||||||||||
Sbjct: 618 agcgggaggtggagatccagt 638
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>gb|AF283877.1|AF283877 Raymunida elegantissima REL3 cytochrome oxidase subunit I (COI)
           gene, partial cds; mitochondrial gene for mitochondrial
           product
          Length = 657

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 289 agcgggaggtggagatccagt 309
           |||||||||||||||||||||
Sbjct: 618 agcgggaggtggagatccagt 638
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>gb|AF283876.1|AF283876 Raymunida elegantissima REL2 cytochrome oxidase subunit I (COI)
           gene, partial cds; mitochondrial gene for mitochondrial
           product
          Length = 657

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 289 agcgggaggtggagatccagt 309
           |||||||||||||||||||||
Sbjct: 618 agcgggaggtggagatccagt 638
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>gb|AF283875.1|AF283875 Raymunida elegantissima REL1 cytochrome oxidase subunit I (COI)
           gene, partial cds; mitochondrial gene for mitochondrial
           product
          Length = 657

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 289 agcgggaggtggagatccagt 309
           |||||||||||||||||||||
Sbjct: 618 agcgggaggtggagatccagt 638
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 139      tggcgacggcggcggcgtacg 159
                |||||||||||||||||||||
Sbjct: 20906116 tggcgacggcggcggcgtacg 20906096



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 141     gcgacggcggcggcgtacgcgccgtacc 168
               |||| |||||||||| ||||||||||||
Sbjct: 3182598 gcgatggcggcggcgcacgcgccgtacc 3182625
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 135      ctcatggcgacggcggcggcg 155
                |||||||||||||||||||||
Sbjct: 26962090 ctcatggcgacggcggcggcg 26962070
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>gb|AC131005.3| Homo sapiens 3 BAC RP11-88K11 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 191231

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 581    tcatgtaaactactcctatatgatg 605
              |||||||||||||||||| ||||||
Sbjct: 187676 tcatgtaaactactcctaaatgatg 187652
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>dbj|AP003868.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1111_B08
          Length = 131184

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 139   tggcgacggcggcggcgtacg 159
             |||||||||||||||||||||
Sbjct: 84417 tggcgacggcggcggcgtacg 84397
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>dbj|AP004744.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBb0065C04
          Length = 165270

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 135   ctcatggcgacggcggcggcg 155
             |||||||||||||||||||||
Sbjct: 85851 ctcatggcgacggcggcggcg 85831
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>emb|AL939130.1|SCO939130 Streptomyces coelicolor A3(2) complete genome; segment 27/29
          Length = 303450

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 141    gcgacggcggcggcgtacgcg 161
              |||||||||||||||||||||
Sbjct: 301221 gcgacggcggcggcgtacgcg 301201
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>gb|AC104713.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1362_G11,
             complete sequence
          Length = 115808

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 132   ttgctcatggcgacggcggcggcg 155
             |||| |||||||||||||||||||
Sbjct: 59883 ttgcccatggcgacggcggcggcg 59906
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>ref|XM_480163.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1812

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 141 gcgacggcggcggcgtacgcgccgtacc 168
           |||| |||||||||| ||||||||||||
Sbjct: 701 gcgatggcggcggcgcacgcgccgtacc 674
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>ref|XM_475811.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1554

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 132 ttgctcatggcgacggcggcggcg 155
           |||| |||||||||||||||||||
Sbjct: 401 ttgcccatggcgacggcggcggcg 424
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>ref|NM_187660.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 513

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 132 ttgctcatggcgacggcggcggcg 155
           |||||||||||| |||||||||||
Sbjct: 65  ttgctcatggcggcggcggcggcg 42
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>gb|AC099009.2| Drosophila melanogaster clone BACR17M11, complete sequence
          Length = 188872

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 285    gtggagcgggaggtggagat 304
              ||||||||||||||||||||
Sbjct: 119133 gtggagcgggaggtggagat 119114
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>gb|AC136223.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0093E24, complete sequence
          Length = 146492

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   tcatggcgacggcggcggcg 155
             ||||||||||||||||||||
Sbjct: 86702 tcatggcgacggcggcggcg 86683
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>ref|NM_173602.2| Homo sapiens DIP2 disco-interacting protein 2 homolog B
           (Drosophila) (DIP2B), mRNA
          Length = 8715

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 132 ttgctcatggcgacggcggcggcg 155
           |||||||||||| |||||||||||
Sbjct: 10  ttgctcatggcggcggcggcggcg 33
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>gb|AF440781.1| Streptomyces cinnamonensis polyether antibiotic monensin biosynthesis
             gene cluster, partial sequence
          Length = 103450

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   ggcggcggcgtacgcgccgt 165
             ||||||||||||||||||||
Sbjct: 71163 ggcggcggcgtacgcgccgt 71144
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>gb|BT025098.1| Drosophila melanogaster IP12358 full insert cDNA
          Length = 2067

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 285 gtggagcgggaggtggagat 304
           ||||||||||||||||||||
Sbjct: 61  gtggagcgggaggtggagat 80
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>emb|AL603844.7| Human DNA sequence from clone RP11-541I21 on chromosome 1, complete
              sequence
          Length = 220185

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 458    ctgcttcctactactacaag 477
              ||||||||||||||||||||
Sbjct: 136646 ctgcttcctactactacaag 136627
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>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome
          Length = 5064019

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 126     tgcgccttgctcatggcgac 145
               ||||||||||||||||||||
Sbjct: 4732829 tgcgccttgctcatggcgac 4732848
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>emb|BX842572.1| Mycobacterium tuberculosis H37Rv complete genome; segment 1/13
          Length = 341957

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 145    cggcggcggcgtacgcgccg 164
              ||||||||||||||||||||
Sbjct: 338803 cggcggcggcgtacgcgccg 338822
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>emb|BX248334.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 1/14
          Length = 343050

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 145    cggcggcggcgtacgcgccg 164
              ||||||||||||||||||||
Sbjct: 339805 cggcggcggcgtacgcgccg 339824



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 145    cggcggcggcgtacgcgccg 164
              ||||||||||||||||||||
Sbjct: 334163 cggcggcggcgtacgcgccg 334182
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>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29
          Length = 277000

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 142   cgacggcggcggcgtacgcg 161
             ||||||||||||||||||||
Sbjct: 66177 cgacggcggcggcgtacgcg 66196
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>emb|AL663001.3|OSJN00197 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022P19,
             complete sequence
          Length = 135836

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 280   gcgaggtggagcgggaggtg 299
             ||||||||||||||||||||
Sbjct: 54482 gcgaggtggagcgggaggtg 54501
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>emb|AJ428529.1|AEV428529 Azoarcus evansii bzdN gene, bzdO gene, bzdP gene, bzdQ gene, bzdR
            gene, ORF1, ORF2, bzdV gene, bzdW gene, bzdX gene, bzdY
            gene, bzdZ gene, bzdA gene and partial bzdB' gene
          Length = 16512

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 140  ggcgacggcggcggcgtacg 159
            ||||||||||||||||||||
Sbjct: 1629 ggcgacggcggcggcgtacg 1610
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>dbj|AP004611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OJ1005_B10
          Length = 142680

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 140    ggcgacggcggcggcgtacg 159
              ||||||||||||||||||||
Sbjct: 138886 ggcgacggcggcggcgtacg 138867
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>dbj|AK091597.1| Homo sapiens cDNA FLJ34278 fis, clone FEBRA2003822
          Length = 2690

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 132 ttgctcatggcgacggcggcggcg 155
           |||||||||||| |||||||||||
Sbjct: 10  ttgctcatggcggcggcggcggcg 33
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>ref|NM_136670.2| Drosophila melanogaster CG1776-RA (CG1776), mRNA
          Length = 2075

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 285 gtggagcgggaggtggagat 304
           ||||||||||||||||||||
Sbjct: 602 gtggagcgggaggtggagat 621
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>gb|AY060726.1| Drosophila melanogaster GH17420 full length cDNA
          Length = 2057

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 285 gtggagcgggaggtggagat 304
           ||||||||||||||||||||
Sbjct: 584 gtggagcgggaggtggagat 603
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 161     gccgtaccggccggagccggagcc 184
               ||||||| ||||||||||||||||
Sbjct: 5237250 gccgtacaggccggagccggagcc 5237273
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 280     gcgaggtggagcgggaggtg 299
               ||||||||||||||||||||
Sbjct: 7327112 gcgaggtggagcgggaggtg 7327131
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 132      ttgctcatggcgacggcggcggcg 155
                |||| |||||||||||||||||||
Sbjct: 26678886 ttgcccatggcgacggcggcggcg 26678909



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 136     tcatggcgacggcggcggcg 155
               ||||||||||||||||||||
Sbjct: 8164469 tcatggcgacggcggcggcg 8164450
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 140      ggcgacggcggcggcgtacg 159
                ||||||||||||||||||||
Sbjct: 18751440 ggcgacggcggcggcgtacg 18751421
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>gb|AC090058.21| Homo sapiens 12 BAC RP11-112N23 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 181102

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 132    ttgctcatggcgacggcggcggcg 155
              |||||||||||| |||||||||||
Sbjct: 167405 ttgctcatggcggcggcggcggcg 167428
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>gb|AC015973.2|AC015973 Homo sapiens BAC clone RP11-366C6 from Y, complete sequence
          Length = 171834

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 380    gaaggacctcaagtgcaagc 399
              ||||||||||||||||||||
Sbjct: 159891 gaaggacctcaagtgcaagc 159872
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>gb|AC104463.3| Homo sapiens chromosome 1 clone RP11-569A11, complete sequence
          Length = 156818

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 380   gaaggacctcaagtgcaagc 399
             ||||||||||||||||||||
Sbjct: 18522 gaaggacctcaagtgcaagc 18503
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>dbj|AP006233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1249E06
          Length = 126534

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 140   ggcgacggcggcggcgtacg 159
             ||||||||||||||||||||
Sbjct: 72957 ggcgacggcggcggcgtacg 72938
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>dbj|AP003905.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1177_E11
          Length = 92375

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 141   gcgacggcggcggcgtacgcgccgtacc 168
             |||| |||||||||| ||||||||||||
Sbjct: 38678 gcgatggcggcggcgcacgcgccgtacc 38705
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>ref|XM_321040.2| Anopheles gambiae str. PEST ENSANGP00000022463 (ENSANGG00000021069),
            partial mRNA
          Length = 13977

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 247  gctccggcgtggtggcggac 266
            ||||||||||||||||||||
Sbjct: 7885 gctccggcgtggtggcggac 7866
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>dbj|AK105115.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-H07, full
           insert sequence
          Length = 861

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 132 ttgctcatggcgacggcggcggcg 155
           |||||||||||| |||||||||||
Sbjct: 95  ttgctcatggcggcggcggcggcg 72
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>dbj|AK101531.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048A09, full
           insert sequence
          Length = 2378

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 132 ttgctcatggcgacggcggcggcg 155
           |||| |||||||||||||||||||
Sbjct: 723 ttgcccatggcgacggcggcggcg 746
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>dbj|AK101190.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030F10, full
           insert sequence
          Length = 2378

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 132 ttgctcatggcgacggcggcggcg 155
           |||| |||||||||||||||||||
Sbjct: 723 ttgcccatggcgacggcggcggcg 746
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>dbj|AK070077.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023045B01, full
           insert sequence
          Length = 1991

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 141 gcgacggcggcggcgtacgcgccgtacc 168
           |||| |||||||||| ||||||||||||
Sbjct: 468 gcgatggcggcggcgcacgcgccgtacc 441
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>dbj|AK068565.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154G12, full
           insert sequence
          Length = 1329

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 140 ggcgacggcggcggcgtacg 159
           ||||||||||||||||||||
Sbjct: 29  ggcgacggcggcggcgtacg 10
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>gb|AE003832.4| Drosophila melanogaster chromosome 2R, section 18 of 73 of the complete
              sequence
          Length = 242171

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 285    gtggagcgggaggtggagat 304
              ||||||||||||||||||||
Sbjct: 117890 gtggagcgggaggtggagat 117871
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>dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complete sequence
          Length = 210614

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 160    cgccgtaccggccggagccg 179
              ||||||||||||||||||||
Sbjct: 176943 cgccgtaccggccggagccg 176962
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>gb|AC005894.1|AC005894 Drosophila melanogaster, chromosome 2R, region 46A1-46B2, P1 clones
              DS00050, DS00191, and DS05369, complete sequence
          Length = 196337

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 285    gtggagcgggaggtggagat 304
              ||||||||||||||||||||
Sbjct: 114555 gtggagcgggaggtggagat 114536


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,019,502
Number of Sequences: 3902068
Number of extensions: 5019502
Number of successful extensions: 114388
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 112907
Number of HSP's gapped (non-prelim): 1481
length of query: 652
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 629
effective length of database: 17,143,297,704
effective search space: 10783134255816
effective search space used: 10783134255816
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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