ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart57d03 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 254 bits (128), Expect = 3e-64 Identities = 293/348 (84%) Strand = Plus / Plus Query: 239 ctcctcgacctcccacatccccgtccgctccctcttcaccgggatagtcgaggaggtcgg 298 ||||||| | || ||| ||||||||||||||||||||||||| || |||||||| ||||| Sbjct: 21671156 ctcctcgccgtcgcacgtccccgtccgctccctcttcaccggcatcgtcgaggacgtcgg 21671215 Query: 299 ccgcgtacgccgcatcggcccgccgcccacgccccctgggggcgggggagacgcggctcc 358 | ||| ||||||||||||||||||||| |||| || ||||| || | || ||| || Sbjct: 21671216 caccgtccgccgcatcggcccgccgcccgcgccgccctccggcggcggcggcgaggcccc 21671275 Query: 359 cggtgttgacctcgaggtcgagacaaagaacctcctcgacggcacgcagctgggggacag 418 ||| |||||||||||||| ||||| | | |||||||| ||| |||||||| |||||||| Sbjct: 21671276 cggcgttgacctcgaggtggagacgagcaccctcctcgccgggacgcagctcggggacag 21671335 Query: 419 catcgccgtcgacgggacgtgcctcaccgtggcggccatcgacaccgctgcctccaccct 478 | | |||||||||||| | ||||||||||| |||||||||||| | || || || || || Sbjct: 21671336 cgtggccgtcgacggggcctgcctcaccgtcgcggccatcgacgcggcggcgtcgacgct 21671395 Query: 479 caccttcggcgtcgcgccggagaccctccggtgcacgtcactcggcgaacgcgccgcggg 538 |||||||||||||||||||||||| ||||| | ||||| ||||||| || |||| || Sbjct: 21671396 caccttcggcgtcgcgccggagacactccgccggacgtccctcggcggccggtccgccgg 21671455 Query: 539 cgacgacgtcaacctcgagcgcgcgctcacgccggcgtctcgcatggg 586 ||||| ||| ||||| ||||||||||||||||||||||| |||||||| Sbjct: 21671456 cgacgccgtgaacctggagcgcgcgctcacgccggcgtcgcgcatggg 21671503 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 49 ccatggcgccgccgcccaccgccgc 73 ||||||||||||||||| ||||||| Sbjct: 22541407 ccatggcgccgccgcccgccgccgc 22541431
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 254 bits (128), Expect = 3e-64 Identities = 293/348 (84%) Strand = Plus / Plus Query: 239 ctcctcgacctcccacatccccgtccgctccctcttcaccgggatagtcgaggaggtcgg 298 ||||||| | || ||| ||||||||||||||||||||||||| || |||||||| ||||| Sbjct: 21599501 ctcctcgccgtcgcacgtccccgtccgctccctcttcaccggcatcgtcgaggacgtcgg 21599560 Query: 299 ccgcgtacgccgcatcggcccgccgcccacgccccctgggggcgggggagacgcggctcc 358 | ||| ||||||||||||||||||||| |||| || ||||| || | || ||| || Sbjct: 21599561 caccgtccgccgcatcggcccgccgcccgcgccgccctccggcggcggcggcgaggcccc 21599620 Query: 359 cggtgttgacctcgaggtcgagacaaagaacctcctcgacggcacgcagctgggggacag 418 ||| |||||||||||||| ||||| | | |||||||| ||| |||||||| |||||||| Sbjct: 21599621 cggcgttgacctcgaggtggagacgagcaccctcctcgccgggacgcagctcggggacag 21599680 Query: 419 catcgccgtcgacgggacgtgcctcaccgtggcggccatcgacaccgctgcctccaccct 478 | | |||||||||||| | ||||||||||| |||||||||||| | || || || || || Sbjct: 21599681 cgtggccgtcgacggggcctgcctcaccgtcgcggccatcgacgcggcggcgtcgacgct 21599740 Query: 479 caccttcggcgtcgcgccggagaccctccggtgcacgtcactcggcgaacgcgccgcggg 538 |||||||||||||||||||||||| ||||| | ||||| ||||||| || |||| || Sbjct: 21599741 caccttcggcgtcgcgccggagacactccgccggacgtccctcggcggccggtccgccgg 21599800 Query: 539 cgacgacgtcaacctcgagcgcgcgctcacgccggcgtctcgcatggg 586 ||||| ||| ||||| ||||||||||||||||||||||| |||||||| Sbjct: 21599801 cgacgccgtgaacctggagcgcgcgctcacgccggcgtcgcgcatggg 21599848 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 49 ccatggcgccgccgcccaccgccgc 73 ||||||||||||||||| ||||||| Sbjct: 22469752 ccatggcgccgccgcccgccgccgc 22469776
>emb|AL731747.2|CNS08C7W Oryza sativa chromosome 12, . BAC OSJNBa0024C08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 186030 Score = 254 bits (128), Expect = 3e-64 Identities = 293/348 (84%) Strand = Plus / Minus Query: 239 ctcctcgacctcccacatccccgtccgctccctcttcaccgggatagtcgaggaggtcgg 298 ||||||| | || ||| ||||||||||||||||||||||||| || |||||||| ||||| Sbjct: 141395 ctcctcgccgtcgcacgtccccgtccgctccctcttcaccggcatcgtcgaggacgtcgg 141336 Query: 299 ccgcgtacgccgcatcggcccgccgcccacgccccctgggggcgggggagacgcggctcc 358 | ||| ||||||||||||||||||||| |||| || ||||| || | || ||| || Sbjct: 141335 caccgtccgccgcatcggcccgccgcccgcgccgccctccggcggcggcggcgaggcccc 141276 Query: 359 cggtgttgacctcgaggtcgagacaaagaacctcctcgacggcacgcagctgggggacag 418 ||| |||||||||||||| ||||| | | |||||||| ||| |||||||| |||||||| Sbjct: 141275 cggcgttgacctcgaggtggagacgagcaccctcctcgccgggacgcagctcggggacag 141216 Query: 419 catcgccgtcgacgggacgtgcctcaccgtggcggccatcgacaccgctgcctccaccct 478 | | |||||||||||| | ||||||||||| |||||||||||| | || || || || || Sbjct: 141215 cgtggccgtcgacggggcctgcctcaccgtcgcggccatcgacgcggcggcgtcgacgct 141156 Query: 479 caccttcggcgtcgcgccggagaccctccggtgcacgtcactcggcgaacgcgccgcggg 538 |||||||||||||||||||||||| ||||| | ||||| ||||||| || |||| || Sbjct: 141155 caccttcggcgtcgcgccggagacactccgccggacgtccctcggcggccggtccgccgg 141096 Query: 539 cgacgacgtcaacctcgagcgcgcgctcacgccggcgtctcgcatggg 586 ||||| ||| ||||| ||||||||||||||||||||||| |||||||| Sbjct: 141095 cgacgccgtgaacctggagcgcgcgctcacgccggcgtcgcgcatggg 141048
>gb|AY108011.1| Zea mays PCO081127 mRNA sequence Length = 697 Score = 69.9 bits (35), Expect = 9e-09 Identities = 55/62 (88%) Strand = Plus / Plus Query: 528 cgcgccgcgggcgacgacgtcaacctcgagcgcgcgctcacgccggcgtctcgcatgggc 587 |||||| ||||||| | |||||||||||||||||||| |||||| |||| ||||||||| Sbjct: 89 cgcgccccgggcgatggtgtcaacctcgagcgcgcgctnacgccgtcgtcccgcatgggc 148 Query: 588 gg 589 || Sbjct: 149 gg 150
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 45 ctcgccatggcgccgccgcccaccgccgccgcggccgtgg 84 ||||||||||||||||| ||| |||||||||| ||||||| Sbjct: 29151361 ctcgccatggcgccgccacccgccgccgccgccgccgtgg 29151322 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 52 tggcgccgccgcccaccgccgccgcggcc 80 |||| ||||||||| |||||||||||||| Sbjct: 30423480 tggccccgccgcccgccgccgccgcggcc 30423508 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 ctcgccatggcgccgccgccc 65 ||||||||||||||||||||| Sbjct: 28602195 ctcgccatggcgccgccgccc 28602215
>dbj|AP003726.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0596H10 Length = 166570 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 45 ctcgccatggcgccgccgcccaccgccgccgcggccgtgg 84 ||||||||||||||||| ||| |||||||||| ||||||| Sbjct: 166348 ctcgccatggcgccgccacccgccgccgccgccgccgtgg 166309
>dbj|AP004324.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1215_E11 Length = 105301 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 45 ctcgccatggcgccgccgcccaccgccgccgcggccgtgg 84 ||||||||||||||||| ||| |||||||||| ||||||| Sbjct: 18648 ctcgccatggcgccgccacccgccgccgccgccgccgtgg 18609
>dbj|AK107735.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-G02, full insert sequence Length = 864 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 45 ctcgccatggcgccgccgcccaccgccgccgcggccgtgg 84 ||||||||||||||||| ||| |||||||||| ||||||| Sbjct: 109 ctcgccatggcgccgccacccgccgccgccgccgccgtgg 148
>dbj|AK100260.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063C04, full insert sequence Length = 854 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 45 ctcgccatggcgccgccgcccaccgccgccgcggccgtgg 84 ||||||||||||||||| ||| |||||||||| ||||||| Sbjct: 112 ctcgccatggcgccgccacccgccgccgccgccgccgtgg 151
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 55 cgccgccgcccaccgccgccgcggc 79 ||||||||||||||||||||||||| Sbjct: 12601901 cgccgccgcccaccgccgccgcggc 12601877 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 57 ccgccgcccaccgccgccgcggcc 80 |||||||||||||||||||||||| Sbjct: 3229603 ccgccgcccaccgccgccgcggcc 3229580 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 gccgccgcccaccgccgccgcggc 79 |||||||||| ||||||||||||| Sbjct: 34488297 gccgccgcccgccgccgccgcggc 34488274 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 cgccgccgcccaccgccgcc 74 |||||||||||||||||||| Sbjct: 30076736 cgccgccgcccaccgccgcc 30076717 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 ccaccgccgccgcggccgtggcat 87 ||||||||||||| |||||||||| Sbjct: 21262314 ccaccgccgccgccgccgtggcat 21262291 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 gccgccgcccaccgccgccgcggc 79 |||||||||| ||||||||||||| Sbjct: 7860737 gccgccgccctccgccgccgcggc 7860760
>gb|AC131175.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0030D15, from chromosome 3, complete sequence Length = 151972 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 55 cgccgccgcccaccgccgccgcggc 79 ||||||||||||||||||||||||| Sbjct: 75088 cgccgccgcccaccgccgccgcggc 75112
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 55 cgccgccgcccaccgccgccgcggc 79 ||||||||||||||||||||||||| Sbjct: 12598664 cgccgccgcccaccgccgccgcggc 12598640 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 57 ccgccgcccaccgccgccgcggcc 80 |||||||||||||||||||||||| Sbjct: 3229714 ccgccgcccaccgccgccgcggcc 3229691 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 gccgccgcccaccgccgccgcggc 79 |||||||||| ||||||||||||| Sbjct: 34578369 gccgccgcccgccgccgccgcggc 34578346 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 cgccgccgcccaccgccgcc 74 |||||||||||||||||||| Sbjct: 30168308 cgccgccgcccaccgccgcc 30168289 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 ccaccgccgccgcggccgtggcat 87 ||||||||||||| |||||||||| Sbjct: 21255343 ccaccgccgccgccgccgtggcat 21255320 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 gccgccgcccaccgccgccgcggc 79 |||||||||| ||||||||||||| Sbjct: 7858572 gccgccgccctccgccgccgcggc 7858595
>gb|AC137744.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0074L11, complete sequence Length = 180703 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Minus Query: 45 ctcgccatggcgccgccgcccaccgccgccgc 76 |||||||||||| |||||| |||||||||||| Sbjct: 63358 ctcgccatggcggcgccgctcaccgccgccgc 63327
>emb|X68444.1|RCNIF R.capsulatus genes nifU, nifS, nifV, nifW and orf6 Length = 3570 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 54 gcgccgccgcccaccgccgccgcggccg 81 |||||||||||| ||||||||||||||| Sbjct: 514 gcgccgccgcccgccgccgccgcggccg 541
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Minus Query: 45 ctcgccatggcgccgccgcccaccgccgccgc 76 |||||||||||| |||||| |||||||||||| Sbjct: 21711305 ctcgccatggcggcgccgctcaccgccgccgc 21711274 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ggcgccgccgcccaccgccg 72 |||||||||||||||||||| Sbjct: 28255579 ggcgccgccgcccaccgccg 28255598 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 cgccgcccaccgccgccgcg 77 |||||||||||||||||||| Sbjct: 23530242 cgccgcccaccgccgccgcg 23530261 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gcgccgccgcccaccgccgc 73 |||||||||||||||||||| Sbjct: 11197113 gcgccgccgcccaccgccgc 11197094 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 ctcgccatggcgccgccgcc 64 |||||||||||||||||||| Sbjct: 6927962 ctcgccatggcgccgccgcc 6927981
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 54 gcgccgccgcccaccgccgccgcggccg 81 ||||||||||||||||||||||| |||| Sbjct: 18741351 gcgccgccgcccaccgccgccgccgccg 18741378 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ggcgccgccgcccaccgccg 72 |||||||||||||||||||| Sbjct: 24103083 ggcgccgccgcccaccgccg 24103102 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 57 ccgccgcccaccgccgccgcggcc 80 ||||||||| |||||||||||||| Sbjct: 19232804 ccgccgcccgccgccgccgcggcc 19232781 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 ctcgccatggcgccgccgcc 64 |||||||||||||||||||| Sbjct: 17980956 ctcgccatggcgccgccgcc 17980975 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gcgccgccgcccaccgccgc 73 |||||||||||||||||||| Sbjct: 16954023 gcgccgccgcccaccgccgc 16954004 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 58 cgccgcccaccgccgccgcggccg 81 ||||||||||||||||| |||||| Sbjct: 11352038 cgccgcccaccgccgccacggccg 11352061 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 54 gcgccgccgcccaccgccgccgcg 77 |||||||||||||||||| ||||| Sbjct: 7474520 gcgccgccgcccaccgccaccgcg 7474497 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 cgccgccgcccaccgccgcc 74 |||||||||||||||||||| Sbjct: 3834035 cgccgccgcccaccgccgcc 3834054
>gb|AC119797.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0083G16, complete sequence Length = 145590 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 57 ccgccgcccaccgccgccgcggcc 80 |||||||||||||||||||||||| Sbjct: 54476 ccgccgcccaccgccgccgcggcc 54453
>dbj|AP005497.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0071O21 Length = 158410 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 54 gcgccgccgcccaccgccgccgcggccg 81 ||||||||||||||||||||||| |||| Sbjct: 83993 gcgccgccgcccaccgccgccgccgccg 84020
>dbj|AK066319.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067A17, full insert sequence Length = 2156 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 45 ctcgccatggcgccgccgcccaccgccgccgc 76 |||||||||||| |||||| |||||||||||| Sbjct: 5 ctcgccatggcggcgccgctcaccgccgccgc 36
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Minus Query: 45 ctcgccatggcgccgccgcccaccgccgccgc 76 |||||||||||| |||||| |||||||||||| Sbjct: 22021504 ctcgccatggcggcgccgctcaccgccgccgc 22021473 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ggcgccgccgcccaccgccg 72 |||||||||||||||||||| Sbjct: 28240159 ggcgccgccgcccaccgccg 28240178 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 cgccgcccaccgccgccgcg 77 |||||||||||||||||||| Sbjct: 23840178 cgccgcccaccgccgccgcg 23840197 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gcgccgccgcccaccgccgc 73 |||||||||||||||||||| Sbjct: 11276302 gcgccgccgcccaccgccgc 11276283 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 ctcgccatggcgccgccgcc 64 |||||||||||||||||||| Sbjct: 6994429 ctcgccatggcgccgccgcc 6994448
>emb|AL645479.19| Mouse DNA sequence from clone RP23-396O3 on chromosome 11 Contains the Cpd gene for carboxypeptidase D and a CpG island, complete sequence Length = 102358 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 56 gccgccgcccaccgccgccgcgg 78 ||||||||||||||||||||||| Sbjct: 74957 gccgccgcccaccgccgccgcgg 74935
>dbj|AK142583.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched library, clone:D630049G17 product:carboxypeptidase D, full insert sequence Length = 2173 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 56 gccgccgcccaccgccgccgcgg 78 ||||||||||||||||||||||| Sbjct: 339 gccgccgcccaccgccgccgcgg 361
>dbj|AK137737.1| Mus musculus adult female vagina cDNA, RIKEN full-length enriched library, clone:9930125P19 product:carboxypeptidase D, full insert sequence Length = 4350 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 56 gccgccgcccaccgccgccgcgg 78 ||||||||||||||||||||||| Sbjct: 348 gccgccgcccaccgccgccgcgg 370
>ref|NM_007754.1| Mus musculus carboxypeptidase D (Cpd), mRNA Length = 4359 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 56 gccgccgcccaccgccgccgcgg 78 ||||||||||||||||||||||| Sbjct: 357 gccgccgcccaccgccgccgcgg 379
>dbj|AK073084.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033022N12, full insert sequence Length = 1943 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 57 ccgccgcccaccgccgccgcggc 79 ||||||||||||||||||||||| Sbjct: 83 ccgccgcccaccgccgccgcggc 61
>dbj|D85391.1| Mus musculus mRNA for gp180-carboxypeptidase D-like enzyme, complete cds Length = 4359 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 56 gccgccgcccaccgccgccgcgg 78 ||||||||||||||||||||||| Sbjct: 357 gccgccgcccaccgccgccgcgg 379
>ref|XM_474642.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 870 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 55 cgccgccgcccaccgccgccgc 76 |||||||||||||||||||||| Sbjct: 223 cgccgccgcccaccgccgccgc 202
>ref|XM_474640.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1137 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 55 cgccgccgcccaccgccgccgc 76 |||||||||||||||||||||| Sbjct: 487 cgccgccgcccaccgccgccgc 466
>ref|NM_192732.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 603 Score = 44.1 bits (22), Expect = 0.51 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Minus Query: 50 catggcgccgccgcccaccgccgccgcggc 79 ||||||||||||||| |||||||||||||| Sbjct: 570 catggcgccgccgcc-accgccgccgcggc 542
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 519 ctcggcgaacgcgccgcgggcgacga 544 |||||||||| ||||||||||||||| Sbjct: 1392171 ctcggcgaacacgccgcgggcgacga 1392196
>emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete genome; segment 12/16 Length = 347137 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 47 cgccatggcgccgccgcccaccgccgccgcggcc 80 ||||||||||||| ||||||||| | |||||||| Sbjct: 149437 cgccatggcgccggcgcccaccggcaccgcggcc 149470
>emb|BX640433.1| Bordetella parapertussis strain 12822, complete genome; segment 11/14 Length = 349305 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 47 cgccatggcgccgccgcccaccgccgccgcggcc 80 ||||||||||||| ||||||||| | |||||||| Sbjct: 85930 cgccatggcgccggcgcccaccggcaccgcggcc 85963
>emb|BX640418.1| Bordetella pertussis strain Tohama I, complete genome; segment 8/12 Length = 349346 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 47 cgccatggcgccgccgcccaccgccgccgcggcc 80 ||||||||||||| ||||||||| | |||||||| Sbjct: 152573 cgccatggcgccggcgcccaccggcaccgcggcc 152606
>emb|AL731589.3|OSJN00239 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039G19, complete sequence Length = 144144 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 55 cgccgccgcccaccgccgccgc 76 |||||||||||||||||||||| Sbjct: 135289 cgccgccgcccaccgccgccgc 135310 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 55 cgccgccgcccaccgccgccgc 76 |||||||||||||||||||||| Sbjct: 103597 cgccgccgcccaccgccgccgc 103576
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 519 ctcggcgaacgcgccgcgggcgacga 544 |||||||||| ||||||||||||||| Sbjct: 4837735 ctcggcgaacacgccgcgggcgacga 4837710
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 55 cgccgccgcccaccgccgccgc 76 |||||||||||||||||||||| Sbjct: 5159016 cgccgccgcccaccgccgccgc 5159037 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 55 cgccgccgcccaccgccgccgc 76 |||||||||||||||||||||| Sbjct: 5127324 cgccgccgcccaccgccgccgc 5127303 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 55 cgccgccgcccaccgccgccgcgg 78 ||||||||||| |||||||||||| Sbjct: 23305649 cgccgccgcccgccgccgccgcgg 23305626
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 55 cgccgccgcccaccgccgccgc 76 |||||||||||||||||||||| Sbjct: 13129504 cgccgccgcccaccgccgccgc 13129525 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 55 cgccgccgcccaccgccgccgcgg 78 |||||||| ||||||||||||||| Sbjct: 24567617 cgccgccggccaccgccgccgcgg 24567640 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 54 gcgccgccgcccaccgccgccgcggccg 81 ||||||||||||| ||| |||||||||| Sbjct: 23788108 gcgccgccgcccagcgcggccgcggccg 23788081 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 cgccgcccaccgccgccgcggccg 81 ||||||||||||||||||| |||| Sbjct: 19908911 cgccgcccaccgccgccgccgccg 19908888
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.51 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Plus Query: 50 catggcgccgccgcccaccgccgccgcggc 79 ||||||||||||||| |||||||||||||| Sbjct: 24119388 catggcgccgccgcc-accgccgccgcggc 24119416 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gccgccgcccaccgccgccg 75 |||||||||||||||||||| Sbjct: 36383610 gccgccgcccaccgccgccg 36383591 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ggcgccgccgcccaccgccg 72 |||||||||||||||||||| Sbjct: 35949923 ggcgccgccgcccaccgccg 35949942 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 ccaagagcatctcctcctcc 242 |||||||||||||||||||| Sbjct: 35426878 ccaagagcatctcctcctcc 35426897 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 tggcgccgccgcccaccgcc 71 |||||||||||||||||||| Sbjct: 23883614 tggcgccgccgcccaccgcc 23883633
>dbj|AP002844.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0410E03 Length = 164839 Score = 44.1 bits (22), Expect = 0.51 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Plus Query: 50 catggcgccgccgcccaccgccgccgcggc 79 ||||||||||||||| |||||||||||||| Sbjct: 95210 catggcgccgccgcc-accgccgccgcggc 95238
>dbj|AP005168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0066B06 Length = 154025 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 55 cgccgccgcccaccgccgccgc 76 |||||||||||||||||||||| Sbjct: 47831 cgccgccgcccaccgccgccgc 47852
>dbj|AK098998.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104D16, full insert sequence Length = 1308 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 55 cgccgccgcccaccgccgccgc 76 |||||||||||||||||||||| Sbjct: 513 cgccgccgcccaccgccgccgc 492
>dbj|AK072016.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102F20, full insert sequence Length = 1365 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 55 cgccgccgcccaccgccgccgc 76 |||||||||||||||||||||| Sbjct: 500 cgccgccgcccaccgccgccgc 479
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 51 atggcgccgccgcccaccgccg 72 |||||||||||||||||||||| Sbjct: 2367432 atggcgccgccgcccaccgccg 2367411
>gb|AC117264.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_D04, complete sequence Length = 168424 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 223 ccaagagcatctcctcctcctcgacctcc 251 |||||||| ||||||||||||| |||||| Sbjct: 111362 ccaagagcttctcctcctcctccacctcc 111390
>ref|XM_587052.2| PREDICTED: Bos taurus similar to leiomodin 3 (fetal) (LOC509978), mRNA Length = 2012 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 233 ctcctcctcctcgacctccca 253 ||||||||||||||||||||| Sbjct: 1367 ctcctcctcctcgacctccca 1387
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 409 tgggggacagcatcgccgtcgacgggacgtgcctcaccgtg 449 ||||||| ||||||||||| |||| || |||||||||||| Sbjct: 292547 tgggggaaagcatcgccgtgaacggtacctgcctcaccgtg 292587
>gb|AC121604.3| Mus musculus BAC clone RP23-312E2 from chromosome 8, complete sequence Length = 209383 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 220 tccccaagagcatctcctcctcctc 244 ||||||||| ||||||||||||||| Sbjct: 54815 tccccaagatcatctcctcctcctc 54791
>gb|AC096781.6| Oryza sativa chromosome 10 BAC OSJNBa0013H08 genomic sequence, complete sequence Length = 58293 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 gccgccgcccaccgccgccgc 76 ||||||||||||||||||||| Sbjct: 42807 gccgccgcccaccgccgccgc 42827
>ref|NM_003114.3| Homo sapiens sperm associated antigen 1 (SPAG1), transcript variant 1, mRNA Length = 3870 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tggcgccgccgcccaccgccgccgc 76 |||||||||||||| |||||||||| Sbjct: 1488 tggcgccgccgcccgccgccgccgc 1464
>ref|NM_172218.1| Homo sapiens sperm associated antigen 1 (SPAG1), transcript variant 2, mRNA Length = 3765 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tggcgccgccgcccaccgccgccgc 76 |||||||||||||| |||||||||| Sbjct: 1383 tggcgccgccgcccgccgccgccgc 1359
>gb|AC034258.10| Oryza sativa chromosome 10 BAC OSJNBb0011A08 genomic sequence, complete sequence Length = 117157 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 gccgccgcccaccgccgccgc 76 ||||||||||||||||||||| Sbjct: 8906 gccgccgcccaccgccgccgc 8926
>gb|AC025647.9| Homo sapiens, clone RP11-316J7, complete sequence Length = 155663 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tggcgccgccgcccaccgccgccgc 76 |||||||||||||| |||||||||| Sbjct: 106976 tggcgccgccgcccgccgccgccgc 106952
>gb|AF311312.1|AF311312 Homo sapiens infertility-related sperm protein mRNA, complete cds Length = 3818 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tggcgccgccgcccaccgccgccgc 76 |||||||||||||| |||||||||| Sbjct: 1495 tggcgccgccgcccgccgccgccgc 1471
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 520 tcggcgaacgcgccgcgggcgacga 544 ||||||||| ||||||||||||||| Sbjct: 1273331 tcggcgaacacgccgcgggcgacga 1273355
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 56 gccgccgcccaccgccgccgc 76 ||||||||||||||||||||| Sbjct: 16349177 gccgccgcccaccgccgccgc 16349157 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 453 gccatcgacaccgctgcctccacc 476 |||||||| ||||||||||||||| Sbjct: 11772459 gccatcgagaccgctgcctccacc 11772436
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 223 ccaagagcatctcctcctcctcgacctcc 251 |||||||| ||||||||||||| |||||| Sbjct: 15456341 ccaagagcttctcctcctcctccacctcc 15456369 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 58 cgccgcccaccgccgccgcggccg 81 |||||||| ||||||||||||||| Sbjct: 24100247 cgccgccctccgccgccgcggccg 24100270 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 gcgccgccgcccaccgccgc 73 |||||||||||||||||||| Sbjct: 8627144 gcgccgccgcccaccgccgc 8627163 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 53 ggcgccgccgcccaccgccgccgcggcc 80 ||||||||||||| ||||||||| |||| Sbjct: 7668172 ggcgccgccgcccgccgccgccgtggcc 7668199
>gb|AF286216.2| Pseudomonas syringae pv. syringae syringopeptin synthetase (sypA), syringopeptin synthetase B (sypB), and syringopeptin synthetase C (sypC) genes, complete cds Length = 73800 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 56 gccgccgcccaccgccgccgc 76 ||||||||||||||||||||| Sbjct: 6584 gccgccgcccaccgccgccgc 6564
>gb|AC147328.4| Pan troglodytes BAC clone RP43-30N11 from chromosome 7, complete sequence Length = 207176 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 461 caccgctgcctccaccctcac 481 ||||||||||||||||||||| Sbjct: 199256 caccgctgcctccaccctcac 199276
>gb|AC107977.13| Homo sapiens chromosome 15, clone CTD-2611K5, complete sequence Length = 152619 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 461 caccgctgcctccaccctcac 481 ||||||||||||||||||||| Sbjct: 120674 caccgctgcctccaccctcac 120654
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 546 gtcaacctcgagcgcgcgctc 566 ||||||||||||||||||||| Sbjct: 3101545 gtcaacctcgagcgcgcgctc 3101525 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 cgccgcccaccgccgccgcggccg 81 ||||||||| |||||||||||||| Sbjct: 675753 cgccgcccagcgccgccgcggccg 675730
>dbj|AP004685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0017G10 Length = 166700 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 52 tggcgccgccgcccaccgccgccgcggcc 80 |||| ||||||||| |||||||||||||| Sbjct: 60841 tggccccgccgcccgccgccgccgcggcc 60869
>dbj|AP003770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0550B04 Length = 150131 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 ctcgccatggcgccgccgccc 65 ||||||||||||||||||||| Sbjct: 93673 ctcgccatggcgccgccgccc 93693
>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0622F03 Length = 170064 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 ctcgccatggcgccgccgccc 65 ||||||||||||||||||||| Sbjct: 2761 ctcgccatggcgccgccgccc 2781
>gb|AY108744.1| Zea mays PCO139141 mRNA sequence Length = 836 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 520 tcggcgaacgcgccgcgggcgacgacgtc 548 |||||||||| ||||||||||| |||||| Sbjct: 214 tcggcgaacgtgccgcgggcgaagacgtc 242
>gb|AY319946.2| Pseudomonas putida strain DSM 3601 pyridine-2,6-bis(monothiocarboxylic acid) biosynthesis gene locus, complete sequence; and flanking regions Length = 51968 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 52 tggcgccgccgcccaccgccgccgcggcc 80 ||||||||||||||| | ||||||||||| Sbjct: 7827 tggcgccgccgcccagcaccgccgcggcc 7799
>dbj|AP003474.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1942A3, complete sequence Length = 165901 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 52 tggcgccgccgcccaccgccgccgc 76 |||||||||||||| |||||||||| Sbjct: 158835 tggcgccgccgcccgccgccgccgc 158811
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 56 gccgccgcccaccgccgccgc 76 ||||||||||||||||||||| Sbjct: 16357430 gccgccgcccaccgccgccgc 16357410 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 453 gccatcgacaccgctgcctccacc 476 |||||||| ||||||||||||||| Sbjct: 11779799 gccatcgagaccgctgcctccacc 11779776
>emb|AL954871.5|CNS08CDA Oryza sativa chromosome 12, . BAC OSJNBb0085B24 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131441 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 49 ccatggcgccgccgcccaccgccgc 73 ||||||||||||||||| ||||||| Sbjct: 43986 ccatggcgccgccgcccgccgccgc 44010
>gb|AC140217.3| Mus musculus BAC clone RP23-279O5 from 8, complete sequence Length = 224205 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 220 tccccaagagcatctcctcctcctc 244 ||||||||| ||||||||||||||| Sbjct: 149755 tccccaagatcatctcctcctcctc 149731
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cttcgcctcccgggtggcca 171 |||||||||||||||||||| Sbjct: 211229 cttcgcctcccgggtggcca 211248
>ref|XM_479910.1| Oryza sativa (japonica cultivar-group), mRNA Length = 561 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 53 ggcgccgccgcccaccgccgccgc 76 ||||||||||||| |||||||||| Sbjct: 162 ggcgccgccgcccgccgccgccgc 139
>ref|XM_479909.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1796 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 53 ggcgccgccgcccaccgccgccgc 76 ||||||||||||| |||||||||| Sbjct: 1567 ggcgccgccgcccgccgccgccgc 1590
>ref|XM_507113.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1163_G08.32 mRNA Length = 1799 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 53 ggcgccgccgcccaccgccgccgc 76 ||||||||||||| |||||||||| Sbjct: 1567 ggcgccgccgcccgccgccgccgc 1590
>ref|NM_185115.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1407 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 gccgccgcccaccgccgccgcggc 79 |||||||||| ||||||||||||| Sbjct: 84 gccgccgcccgccgccgccgcggc 61
>ref|XM_466682.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1671 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ggcgccgccgcccaccgccg 72 |||||||||||||||||||| Sbjct: 791 ggcgccgccgcccaccgccg 810
>ref|XM_506864.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1004_A05.15 mRNA Length = 1716 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ggcgccgccgcccaccgccg 72 |||||||||||||||||||| Sbjct: 791 ggcgccgccgcccaccgccg 810
>ref|XM_465866.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1428 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 ctcgccatggcgccgccgcc 64 |||||||||||||||||||| Sbjct: 176 ctcgccatggcgccgccgcc 195
>ref|XM_465867.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1916 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 ctcgccatggcgccgccgcc 64 |||||||||||||||||||| Sbjct: 293 ctcgccatggcgccgccgcc 312
>ref|XM_465082.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1020 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 58 cgccgcccaccgccgccgcggccg 81 ||||||||||||||||| |||||| Sbjct: 971 cgccgcccaccgccgccacggccg 994
>ref|NM_001003155.1| Canis familiaris parathyroid hormone receptor 1 (PTHR1), mRNA Length = 2177 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 ccgccgcccaccgccgccgc 76 |||||||||||||||||||| Sbjct: 1070 ccgccgcccaccgccgccgc 1089
>ref|XM_464283.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1325 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 cgccgccgcccaccgccgcc 74 |||||||||||||||||||| Sbjct: 652 cgccgccgcccaccgccgcc 633
>ref|XM_463058.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1041 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 ccaccgccgccgcggccgtggcat 87 ||||||||||||| |||||||||| Sbjct: 896 ccaccgccgccgccgccgtggcat 873
>ref|NM_192692.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 999 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 tggcgccgccgcccaccgcc 71 |||||||||||||||||||| Sbjct: 685 tggcgccgccgcccaccgcc 666
>ref|XM_469663.1| Oryza sativa (japonica cultivar-group), mRNA Length = 513 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 cgccgccgcccaccgccgcc 74 |||||||||||||||||||| Sbjct: 244 cgccgccgcccaccgccgcc 225
>ref|XM_479065.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3665 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 55 cgccgccgcccaccgccgccgcgg 78 |||||||| ||||||||||||||| Sbjct: 135 cgccgccggccaccgccgccgcgg 158
>ref|NM_187023.1| Oryza sativa (japonica cultivar-group), mRNA Length = 579 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 54 gcgccgccgcccaccgccgccgcggccg 81 ||||||||||||| ||| |||||||||| Sbjct: 77 gcgccgccgcccagcgcggccgcggccg 104
>ref|NM_187407.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1455 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 cgccgcccaccgccgccgcggccg 81 ||||||||||||||||||| |||| Sbjct: 371 cgccgcccaccgccgccgccgccg 348
>ref|XM_472800.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 432 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 55 cgccgccgcccaccgccgccgcgg 78 ||||||||||| |||||||||||| Sbjct: 251 cgccgccgcccgccgccgccgcgg 228
>gb|BT018804.1| Zea mays clone EL01N0529F07.d mRNA sequence Length = 1313 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 accgccgccgcggccgtggc 85 |||||||||||||||||||| Sbjct: 56 accgccgccgcggccgtggc 75
>gb|AY762116.1| Chlamydomonas reinhardtii thioredoxin-like protein mRNA, complete cds Length = 2636 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 cgccgccgcccaccgccgcc 74 |||||||||||||||||||| Sbjct: 1314 cgccgccgcccaccgccgcc 1295
>gb|AC137606.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0004B23, complete sequence Length = 153136 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 gcgccgccgcccaccgccgc 73 |||||||||||||||||||| Sbjct: 112716 gcgccgccgcccaccgccgc 112735
>gb|AY186678.1| Cancer magister clone Cma50 microsatellite sequence Length = 302 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 ctcctcctcctcgacctccc 252 |||||||||||||||||||| Sbjct: 265 ctcctcctcctcgacctccc 246
>gb|CP000145.1| Rhodobacter sphaeroides 2.4.1 plasmid B, complete sequence Length = 114178 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 51 atggcgccgccgcccaccgccgcc 74 ||||||||||||||| |||||||| Sbjct: 42375 atggcgccgccgcccgccgccgcc 42352
>gb|AC136971.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0032K12, complete sequence Length = 166936 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 ctcgccatggcgccgccgcc 64 |||||||||||||||||||| Sbjct: 53220 ctcgccatggcgccgccgcc 53239
>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04 map S10003, complete sequence Length = 119238 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ggcgccgccgcccaccgccg 72 |||||||||||||||||||| Sbjct: 60382 ggcgccgccgcccaccgccg 60401
>gb|AC120306.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0038F10 map C53961S, complete sequence Length = 68992 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 gcgccgccgcccaccgccgc 73 |||||||||||||||||||| Sbjct: 29508 gcgccgccgcccaccgccgc 29527
>gb|AC121292.9| Mus musculus chromosome 1, clone RP23-172B15, complete sequence Length = 193192 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 ctcctcctcctcgacctccc 252 |||||||||||||||||||| Sbjct: 128327 ctcctcctcctcgacctccc 128308
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 463 ccgctgcctccaccctcacc 482 |||||||||||||||||||| Sbjct: 2213765 ccgctgcctccaccctcacc 2213784
>gb|AC137624.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0680F01, complete sequence Length = 156691 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 gcgccgccgcccaccgccgc 73 |||||||||||||||||||| Sbjct: 35567 gcgccgccgcccaccgccgc 35586
>ref|XM_323855.1| Neurospora crassa OR74A hypothetical protein (NCU04503.1) partial mRNA Length = 1449 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 231 atctcctcctcctcgacctcccac 254 ||||||||||||||| |||||||| Sbjct: 1400 atctcctcctcctcgtcctcccac 1377
>ref|XM_427117.1| PREDICTED: Gallus gallus similar to putative microtubule associated protein; cNau (LOC429560), mRNA Length = 933 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 338 gggcgggggagacgcggctcccgg 361 ||||||||| |||||||||||||| Sbjct: 192 gggcgggggggacgcggctcccgg 215
>gb|AC104275.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1212_C10, complete sequence Length = 138209 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 53 ggcgccgccgcccaccgccgccgcggcc 80 ||||||||||||| ||||||||| |||| Sbjct: 104567 ggcgccgccgcccgccgccgccgtggcc 104594
>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088I06, complete sequence Length = 187651 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 58 cgccgcccaccgccgccgcggccg 81 |||||||| ||||||||||||||| Sbjct: 168736 cgccgccctccgccgccgcggccg 168759
>ref|XM_951821.1| Neurospora crassa OR74A hypothetical protein (NCU04503.1) partial mRNA Length = 1449 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 231 atctcctcctcctcgacctcccac 254 ||||||||||||||| |||||||| Sbjct: 1400 atctcctcctcctcgtcctcccac 1377
>ref|XM_877434.1| PREDICTED: Bos taurus hypothetical protein LOC614464 (LOC614464), mRNA Length = 726 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 55 cgccgccgcccaccgccgccgcgg 78 |||||||||||||||||| ||||| Sbjct: 14 cgccgccgcccaccgccggcgcgg 37
>gb|DQ004266.1| Oryza sativa (japonica cultivar-group) FST (FST) mRNA, complete cds Length = 1328 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 cgccgccgcccaccgccgcc 74 |||||||||||||||||||| Sbjct: 640 cgccgccgcccaccgccgcc 621
>gb|AC146766.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone B1112E06, complete sequence Length = 177488 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 cgccgcccaccgccgccgcg 77 |||||||||||||||||||| Sbjct: 120928 cgccgcccaccgccgccgcg 120947
>gb|AY446894.1| Human herpesvirus 5 strain Merlin, complete genome Length = 235645 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 ctcgccatggcgccgccgcc 64 |||||||||||||||||||| Sbjct: 121059 ctcgccatggcgccgccgcc 121078
>gb|AC133333.5| Oryza sativa chromosome 3 BAC OJ1785_A05 genomic sequence, complete sequence Length = 174910 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 ccaccgccgccgcggccgtggcat 87 ||||||||||||| |||||||||| Sbjct: 118229 ccaccgccgccgccgccgtggcat 118206
>gb|AC096855.5| Oryza sativa chromosome 3 BAC OJ1365_D05 genomic sequence, complete sequence Length = 163972 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 cgccgccgcccaccgccgcc 74 |||||||||||||||||||| Sbjct: 147159 cgccgccgcccaccgccgcc 147178
>emb|AL591686.10| Human DNA sequence from clone RP11-561I11 on chromosome 1 Contains the 3' end of a novel gene (FLJ40773) and two novel genes, complete sequence Length = 175463 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 465 gctgcctccaccctcacctt 484 |||||||||||||||||||| Sbjct: 172612 gctgcctccaccctcacctt 172593
>gb|AF424647.1| Phytophthora infestans clone MY-05-B-09 argininosuccinate lyase mRNA, complete cds Length = 1522 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 ccagccgctgcgcttctcgc 210 |||||||||||||||||||| Sbjct: 523 ccagccgctgcgcttctcgc 542
>emb|BX013808.1|CNS08ITG Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA20DA10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 708 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 catctcctcctcctcgacct 249 |||||||||||||||||||| Sbjct: 292 catctcctcctcctcgacct 311
>emb|BX013807.1|CNS08ITF Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA20DA10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 872 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 catctcctcctcctcgacct 249 |||||||||||||||||||| Sbjct: 621 catctcctcctcctcgacct 602
>gb|AY920595.1| Uncultured bacterium clone LW-BF-fhcD2 formyltransferase/hydrolase complex subunit D (fhcD) gene, partial cds Length = 836 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gccgccgcccaccgccgccg 75 |||||||||||||||||||| Sbjct: 465 gccgccgcccaccgccgccg 446
>gb|AY920584.1| Xanthobacter sp. JLW14 formyltransferase/hydrolase complex subunit D (fhcD) gene, partial cds Length = 671 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gccgccgcccaccgccgccg 75 |||||||||||||||||||| Sbjct: 422 gccgccgcccaccgccgccg 403
>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete sequence Length = 155106 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 cgccgccgcccaccgccgcc 74 |||||||||||||||||||| Sbjct: 30865 cgccgccgcccaccgccgcc 30884
>emb|AL606588.4|OSJN00023 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0016O02, complete sequence Length = 167988 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 55 cgccgccgcccaccgccgccgcgg 78 ||||||||||| |||||||||||| Sbjct: 23146 cgccgccgcccgccgccgccgcgg 23123
>gb|AC114474.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032N04, from chromosome 10, complete sequence Length = 159445 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 453 gccatcgacaccgctgcctccacc 476 |||||||| ||||||||||||||| Sbjct: 90520 gccatcgagaccgctgcctccacc 90497
>gb|AC087742.9| Homo sapiens chromosome 17, clone RP11-104O19, complete sequence Length = 168834 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 cccatcccaaatcctcccca 27 |||||||||||||||||||| Sbjct: 133251 cccatcccaaatcctcccca 133232
>gb|AC087292.14| Homo sapiens chromosome 17, clone RP11-810M2, complete sequence Length = 195144 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 cccatcccaaatcctcccca 27 |||||||||||||||||||| Sbjct: 173671 cccatcccaaatcctcccca 173690
>dbj|AK094320.1| Homo sapiens cDNA FLJ37001 fis, clone BRACE2008172 Length = 2410 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 cccatcccaaatcctcccca 27 |||||||||||||||||||| Sbjct: 160 cccatcccaaatcctcccca 179
>gb|AE012209.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 117 of 460 of the complete genome Length = 12098 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 cgccgcccaccgccgccgcg 77 |||||||||||||||||||| Sbjct: 2219 cgccgcccaccgccgccgcg 2200
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 547 tcaacctcgagcgcgcgctc 566 |||||||||||||||||||| Sbjct: 3836126 tcaacctcgagcgcgcgctc 3836145
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 tcaccgtggcggccatcgac 461 |||||||||||||||||||| Sbjct: 6237 tcaccgtggcggccatcgac 6256
>gb|AC092748.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0019N10, from chromosome 10, complete sequence Length = 192267 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 453 gccatcgacaccgctgcctccacc 476 |||||||| ||||||||||||||| Sbjct: 141860 gccatcgagaccgctgcctccacc 141883
>gb|AC096687.5| Oryza sativa chromosome 3 BAC OSJNBa0010E04 genomic sequence, complete sequence Length = 117505 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 gccgccgcccaccgccgccgcggc 79 |||||||||| ||||||||||||| Sbjct: 37870 gccgccgcccgccgccgccgcggc 37893
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 47 cgccatggcgccgccgcccaccgccgcc 74 ||||||||||||||||| ||||| |||| Sbjct: 4880803 cgccatggcgccgccgcgcaccgacgcc 4880830
>ref|XM_689818.1| PREDICTED: Danio rerio similar to CG8176-PB, isoform B (LOC566542), mRNA Length = 2967 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 233 ctcctcctcctcgacctcccacat 256 |||||||||||| ||||||||||| Sbjct: 1682 ctcctcctcctccacctcccacat 1705
>emb|CR524094.1| Gallus gallus finished cDNA, clone ChEST257g6 Length = 806 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 cccatcccaaatcctcccca 27 |||||||||||||||||||| Sbjct: 236 cccatcccaaatcctcccca 255
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 54 gcgccgccgcccaccgccgccgcg 77 ||||||||||||| |||||||||| Sbjct: 1101314 gcgccgccgcccaacgccgccgcg 1101291
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 cgccgcccaccgccgccgcg 77 |||||||||||||||||||| Sbjct: 3761088 cgccgcccaccgccgccgcg 3761107
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 ccaccgccgccgcggccgtg 83 |||||||||||||||||||| Sbjct: 10107546 ccaccgccgccgcggccgtg 10107565
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 53 ggcgccgccgcccaccgccgccgc 76 ||||||||||||| |||||||||| Sbjct: 1592924 ggcgccgccgcccgccgccgccgc 1592947
>gb|AC093838.3| Homo sapiens BAC clone RP11-433A19 from 2, complete sequence Length = 178029 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 gcccacgccccctgggggcg 342 |||||||||||||||||||| Sbjct: 70499 gcccacgccccctgggggcg 70480
>gb|AC134235.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0030J04, complete sequence Length = 153431 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 gccgccgcccaccgccgccgcggc 79 |||||||||| ||||||||||||| Sbjct: 46335 gccgccgccctccgccgccgcggc 46358
>ref|NM_204919.1| Gallus gallus putative microtubule associated protein (NAU), mRNA Length = 5069 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 338 gggcgggggagacgcggctcccgg 361 ||||||||| |||||||||||||| Sbjct: 290 gggcgggggggacgcggctcccgg 313
>gb|AE004858.1| Pseudomonas aeruginosa PAO1, section 419 of 529 of the complete genome Length = 10487 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 gacagcatcgccgtcgacgg 433 |||||||||||||||||||| Sbjct: 1578 gacagcatcgccgtcgacgg 1597
>gb|AC131235.4| Homo sapiens 3 BAC RP11-778D9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 174521 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 58 cgccgcccaccgccgccgcggccg 81 |||||||| ||||||||||||||| Sbjct: 56334 cgccgcccgccgccgccgcggccg 56357
>dbj|AP003251.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0446B05 Length = 149145 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gccgccgcccaccgccgccg 75 |||||||||||||||||||| Sbjct: 133487 gccgccgcccaccgccgccg 133468
>dbj|AP003231.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031D11 Length = 138108 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ggcgccgccgcccaccgccg 72 |||||||||||||||||||| Sbjct: 48601 ggcgccgccgcccaccgccg 48620
>dbj|AP004127.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0005H10 Length = 142885 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gccgccgcccaccgccgccg 75 |||||||||||||||||||| Sbjct: 35449 gccgccgcccaccgccgccg 35430
>dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1088C09 Length = 154084 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 ccaagagcatctcctcctcc 242 |||||||||||||||||||| Sbjct: 50827 ccaagagcatctcctcctcc 50846
>dbj|AP005128.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0466E03 Length = 138343 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 ccaccgccgccgcggccgtg 83 |||||||||||||||||||| Sbjct: 136850 ccaccgccgccgcggccgtg 136869
>dbj|AP003303.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0704D04 Length = 147638 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 tggcgccgccgcccaccgcc 71 |||||||||||||||||||| Sbjct: 30018 tggcgccgccgcccaccgcc 30037
>dbj|AP004132.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1089_A02 Length = 117908 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gcgccgccgcccaccgccgc 73 |||||||||||||||||||| Sbjct: 96128 gcgccgccgcccaccgccgc 96109
>dbj|AP005322.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0677G01 Length = 137031 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gcgccgccgcccaccgccgc 73 |||||||||||||||||||| Sbjct: 5279 gcgccgccgcccaccgccgc 5260
>dbj|AP004070.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1705_E12 Length = 191416 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 54 gcgccgccgcccaccgccgccgcg 77 |||||||||||||||||| ||||| Sbjct: 68226 gcgccgccgcccaccgccaccgcg 68203
>dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0036M16 Length = 158880 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 cgccgcccaccgccgccgcggccg 81 ||||||||||||||||||| |||| Sbjct: 73561 cgccgcccaccgccgccgccgccg 73538
>dbj|AP005809.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0039M16 Length = 133229 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 55 cgccgccgcccaccgccgccgcgg 78 |||||||| ||||||||||||||| Sbjct: 23684 cgccgccggccaccgccgccgcgg 23707
>dbj|AP005437.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1113_E01 Length = 73706 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 54 gcgccgccgcccaccgccgccgcggccg 81 ||||||||||||| ||| |||||||||| Sbjct: 43038 gcgccgccgcccagcgcggccgcggccg 43011
>dbj|AP005566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1253_E02 Length = 166645 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 ccaccgccgccgcggccgtg 83 |||||||||||||||||||| Sbjct: 67224 ccaccgccgccgcggccgtg 67243
>emb|BX005396.5| Zebrafish DNA sequence from clone CH211-128N12, complete sequence Length = 177531 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 gtccagccgctgcgcttctc 208 |||||||||||||||||||| Sbjct: 67125 gtccagccgctgcgcttctc 67106
>emb|BX088595.7| Zebrafish DNA sequence from clone DKEY-218B7 in linkage group 6, complete sequence Length = 143341 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 233 ctcctcctcctcgacctcccacat 256 |||||||||||| ||||||||||| Sbjct: 36211 ctcctcctcctccacctcccacat 36234
>dbj|AP004777.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0458B05 Length = 144917 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 57 ccgccgcccaccgccgccgcggcc 80 ||||||||| |||||||||||||| Sbjct: 602 ccgccgcccgccgccgccgcggcc 579
>dbj|AP004772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0415B12 Length = 157419 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 57 ccgccgcccaccgccgccgcggcc 80 ||||||||| |||||||||||||| Sbjct: 131053 ccgccgcccgccgccgccgcggcc 131030
>dbj|AP004113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1116_A06 Length = 176062 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 cgccgccgcccaccgccgcc 74 |||||||||||||||||||| Sbjct: 90367 cgccgccgcccaccgccgcc 90386
>dbj|AP004836.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030G02 Length = 187265 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 cgccgccgcccaccgccgcc 74 |||||||||||||||||||| Sbjct: 32506 cgccgccgcccaccgccgcc 32525
>dbj|AP005285.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1003_F04 Length = 139563 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 ctcgccatggcgccgccgcc 64 |||||||||||||||||||| Sbjct: 42550 ctcgccatggcgccgccgcc 42569
>dbj|AP005414.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0073G17 Length = 162391 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 58 cgccgcccaccgccgccgcggccg 81 ||||||||||||||||| |||||| Sbjct: 154853 cgccgcccaccgccgccacggccg 154876
>dbj|AP004123.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1654_A02 Length = 128520 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 58 cgccgcccaccgccgccgcggccg 81 ||||||||||||||||| |||||| Sbjct: 21510 cgccgcccaccgccgccacggccg 21533
>dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_A05 Length = 174290 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ggcgccgccgcccaccgccg 72 |||||||||||||||||||| Sbjct: 61824 ggcgccgccgcccaccgccg 61843
>dbj|AP003886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1163_G08 Length = 150676 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 53 ggcgccgccgcccaccgccgccgc 76 ||||||||||||| |||||||||| Sbjct: 120412 ggcgccgccgcccgccgccgccgc 120435
>dbj|AK121154.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078O05, full insert sequence Length = 1956 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 gccgccgcccaccgccgccgcggc 79 |||||||||| ||||||||||||| Sbjct: 466 gccgccgccctccgccgccgcggc 489
>dbj|AK120677.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013162E22, full insert sequence Length = 1917 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 ctcgccatggcgccgccgcc 64 |||||||||||||||||||| Sbjct: 293 ctcgccatggcgccgccgcc 312
>dbj|AK119657.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-H05, full insert sequence Length = 1807 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 53 ggcgccgccgcccaccgccgccgc 76 ||||||||||||| |||||||||| Sbjct: 1567 ggcgccgccgcccgccgccgccgc 1590
>ref|XM_562819.1| Anopheles gambiae str. PEST ENSANGP00000026097 (ENSANGG00000022829), partial mRNA Length = 543 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 catctcctcctcctcgacct 249 |||||||||||||||||||| Sbjct: 243 catctcctcctcctcgacct 224
>dbj|AP005807.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0018H10 Length = 135879 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 55 cgccgccgcccaccgccgccgcgg 78 |||||||| ||||||||||||||| Sbjct: 60911 cgccgccggccaccgccgccgcgg 60934
>dbj|AK110997.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-E07, full insert sequence Length = 1574 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 53 ggcgccgccgcccaccgccgccgcggcc 80 ||||||||||||| ||||||||| |||| Sbjct: 72 ggcgccgccgcccgccgccgccgtggcc 99
>ref|XM_312750.2| Anopheles gambiae str. PEST ENSANGP00000020330 (ENSANGG00000017841), partial mRNA Length = 705 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 catctcctcctcctcgacct 249 |||||||||||||||||||| Sbjct: 417 catctcctcctcctcgacct 398
>ref|XM_312672.2| Anopheles gambiae str. PEST ENSANGP00000023029 (ENSANGG00000020647), partial mRNA Length = 2103 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 ctcctcctcctcgacctccc 252 |||||||||||||||||||| Sbjct: 1722 ctcctcctcctcgacctccc 1703
>dbj|AK109522.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-F04, full insert sequence Length = 1325 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 cgccgccgcccaccgccgcc 74 |||||||||||||||||||| Sbjct: 652 cgccgccgcccaccgccgcc 633
>dbj|AK107798.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-133-D12, full insert sequence Length = 564 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ggcgccgccgcccaccgccg 72 |||||||||||||||||||| Sbjct: 34 ggcgccgccgcccaccgccg 53
>dbj|AK107037.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-B10, full insert sequence Length = 1713 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 gccgccgcccaccgccgccgcggc 79 |||||||||| ||||||||||||| Sbjct: 159 gccgccgcccgccgccgccgcggc 136
>dbj|AK105316.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-E07, full insert sequence Length = 1796 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 53 ggcgccgccgcccaccgccgccgc 76 ||||||||||||| |||||||||| Sbjct: 1567 ggcgccgccgcccgccgccgccgc 1590
>dbj|AK104319.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-E04, full insert sequence Length = 1671 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ggcgccgccgcccaccgccg 72 |||||||||||||||||||| Sbjct: 791 ggcgccgccgcccaccgccg 810
>dbj|AK101755.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033063K15, full insert sequence Length = 2176 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gccgccgcccaccgccgccg 75 |||||||||||||||||||| Sbjct: 61 gccgccgcccaccgccgccg 80
>dbj|AK100000.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134N21, full insert sequence Length = 3666 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 55 cgccgccgcccaccgccgccgcgg 78 |||||||| ||||||||||||||| Sbjct: 135 cgccgccggccaccgccgccgcgg 158
>dbj|AK073154.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033011D19, full insert sequence Length = 909 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 55 cgccgccgcccaccgccgccgcgg 78 ||||||||||| |||||||||||| Sbjct: 358 cgccgccgcccgccgccgccgcgg 335
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 406 agctgggggacagcatcgccgtcgacgg 433 ||||||| ||||||||||||||| |||| Sbjct: 602804 agctgggcgacagcatcgccgtcaacgg 602831
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 308 ccgcatcggcccgccgcccacgcc 331 ||||||||||| |||||||||||| Sbjct: 1919686 ccgcatcggcctgccgcccacgcc 1919709
>dbj|AK060705.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-G09, full insert sequence Length = 1714 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ggcgccgccgcccaccgccg 72 |||||||||||||||||||| Sbjct: 789 ggcgccgccgcccaccgccg 808
>gb|AF167095.1|AF167095 Canis familiaris parathyroid hormone receptor-1 (PTH1) mRNA, complete cds Length = 2177 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 ccgccgcccaccgccgccgc 76 |||||||||||||||||||| Sbjct: 1070 ccgccgcccaccgccgccgc 1089
>gb|U25968.1|OSU25968 Oryza sativa early embryogenesis protein (OSE351) mRNA, complete cds Length = 1772 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 53 ggcgccgccgcccaccgccgccgc 76 ||||||||||||| |||||||||| Sbjct: 1524 ggcgccgccgcccgccgccgccgc 1547
>gb|DQ333338.1| Oryza sativa (japonica cultivar-group) UDP-glucuronic acid 4-epimerase isoform 1 mRNA, complete cds Length = 1455 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 gccgccgcccaccgccgccgcggc 79 |||||||||| ||||||||||||| Sbjct: 403 gccgccgccctccgccgccgcggc 426
>dbj|AB090821.1| Anopheles gambiae retrotransposon R7Ag2 DNA, complete sequence Length = 6590 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 ctcctcctcctcgacctccc 252 |||||||||||||||||||| Sbjct: 5909 ctcctcctcctcgacctccc 5890
>gb|AF038560.1|AF038560 Gallus gallus putative microtubule associated protein (Nau) mRNA, complete cds Length = 5069 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 338 gggcgggggagacgcggctcccgg 361 ||||||||| |||||||||||||| Sbjct: 290 gggcgggggggacgcggctcccgg 313
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 atcggcccgccgcccacgcc 331 |||||||||||||||||||| Sbjct: 1129712 atcggcccgccgcccacgcc 1129693
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 cgccgccgcccaccgccgcc 74 |||||||||||||||||||| Sbjct: 931515 cgccgccgcccaccgccgcc 931496
>gb|U75651.1|HSU75651 Human dishevelled 3 (DVL3) mRNA, complete cds Length = 3403 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 cgccgcccaccgccgccgcggccg 81 |||||||| ||||||||||||||| Sbjct: 231 cgccgcccgccgccgccgcggccg 208
>gb|AC167020.3| Mus musculus BAC clone RP23-201I6 from chromosome 1, complete sequence Length = 209249 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 ctcctcctcctcgacctccc 252 |||||||||||||||||||| Sbjct: 201958 ctcctcctcctcgacctccc 201977
>emb|AL365476.1|LMFLUNK02 Leishmania major Friedlin cosmid clones L8382, incomplete shotgun, assembled reads, with VERY preliminary annotation, complete sequence Length = 28334 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 ccgcccaccgccgccgcggc 79 |||||||||||||||||||| Sbjct: 7456 ccgcccaccgccgccgcggc 7437 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,729,598 Number of Sequences: 3902068 Number of extensions: 4729598 Number of successful extensions: 125490 Number of sequences better than 10.0: 193 Number of HSP's better than 10.0 without gapping: 218 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 115881 Number of HSP's gapped (non-prelim): 9603 length of query: 589 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 566 effective length of database: 17,143,297,704 effective search space: 9703106500464 effective search space used: 9703106500464 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
