ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart57d02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_197929.1| Oryza sativa (japonica cultivar-group) putative... 355 1e-94
2dbj|AB110173.1| Oryza sativa (japonica cultivar-group) mRNA for ... 355 1e-94
3dbj|AK071604.1| Oryza sativa (japonica cultivar-group) cDNA clon... 347 2e-92
4gb|AC018727.10| Oryza sativa chromosome 10 BAC OSJNBa0056G17 gen... 281 1e-72
5dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 281 1e-72
6gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 281 1e-72
7gb|AY111430.1| Zea mays CL65354_1 mRNA sequence 119 1e-23
8ref|XM_865814.1| PREDICTED: Bos taurus similar to invasion inhib... 44 0.49
9ref|XM_877016.1| PREDICTED: Bos taurus similar to invasion inhib... 44 0.49
10ref|XM_876968.1| PREDICTED: Bos taurus similar to invasion inhib... 44 0.49
11gb|AC101883.6| Mus musculus chromosome 1, clone RP23-402F17, com... 42 2.0
12gb|AE014820.1| Plasmodium falciparum 3D7 chromosome 14 section 5... 42 2.0
13gb|AC093866.3| Homo sapiens BAC clone RP11-582C12 from 4, comple... 42 2.0
14gb|AY022715.1| Oryza sativa microsatellite MRG5040 containing (C... 40 7.7
15gb|BC076546.1| Danio rerio frizzled homolog 10, mRNA (cDNA clone... 40 7.7
16gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 7.7
17gb|AC124367.4| Mus musculus BAC clone RP24-545D20 from chromosom... 40 7.7
18gb|AC133957.2| Mus musculus BAC clone RP23-367D8 from chromosome... 40 7.7
19gb|AC122021.2| Mus musculus BAC clone RP24-366N1 from 3, complet... 40 7.7
20emb|CR719754.2|CNS0GIB4 Tetraodon nigroviridis full-length cDNA 40 7.7
21emb|CR718320.2|CNS0GH7A Tetraodon nigroviridis full-length cDNA 40 7.7
22gb|AC004690.2| Homo sapiens PAC clone RP4-630C24 from 7, complet... 40 7.7
23gb|U53181.1| Caenorhabditis elegans cosmid F36D4, complete sequence 40 7.7
24gb|AC142338.1| Pan troglodytes BAC clone RP43-41H4 from 7, compl... 40 7.7
25emb|CR450819.7| Zebrafish DNA sequence from clone DKEY-245G2 in ... 40 7.7
26gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.7
27gb|AC130186.4| Atelerix albiventris clone LB4-244I20, complete s... 40 7.7
28emb|CR788314.7| Zebrafish DNA sequence from clone DKEY-205J18 in... 40 7.7
29emb|CR450726.6| Zebrafish DNA sequence from clone CH211-149F21 i... 40 7.7
30gb|AC118668.2| Genomic sequence for Oryza sativa, Nipponbare str... 40 7.7
31gb|AC024086.5| Homo sapiens chromosome 7 clone RP11-242F21, comp... 40 7.7
32gb|AC093568.2| Oryza sativa chromosome 10 clone OSJNBa0029P16, c... 40 7.7
33ref|XM_694196.1| PREDICTED: Danio rerio similar to KPL2 protein ... 40 7.7
34gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold 40 7.7
35gb|AC154419.2| Mus musculus BAC clone RP24-212C1 from chromosome... 40 7.7
36gb|AC153870.8| Mus musculus 10 BAC RP23-473J14 (Roswell Park Can... 40 7.7
37gb|BC093156.1| Danio rerio hypothetical protein LOC553375, mRNA ... 40 7.7
38dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
39dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
40gb|AC149788.2| Pan troglodytes BAC clone CH251-63L13 from chromo... 40 7.7
41ref|NM_131136.1| Danio rerio frizzled homolog 10 (fzd10), mRNA 40 7.7
42ref|NM_130917.1| Danio rerio frizzled homolog 10 (fzd10), mRNA 40 7.7
43gb|AC022506.38| Homo sapiens 12 BAC RP11-181L23 (Roswell Park Ca... 40 7.7
44gb|AC134240.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.7
45gb|AE004705.1| Pseudomonas aeruginosa PAO1, section 266 of 529 o... 40 7.7
46gb|AC009358.6|AC009358 Human Chromosome 7 clone RP11-191E5, comp... 40 7.7
47gb|AC167668.1| Mus musculus BAC clone RP24-241I19 from chromosom... 40 7.7
48gb|AC091301.3| Danio rerio clone 1K20, complete sequence 40 7.7
49gb|AF039411.1|AF039411 Danio rerio frizzled homolog (zfzB) mRNA,... 40 7.7
50dbj|AP004884.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
51dbj|AK109960.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.7
52gb|AC131741.4| Mus musculus BAC clone RP23-66E21 from 7, complet... 40 7.7
53gb|AC122222.6| Mus musculus BAC clone RP23-128D11 from 7, comple... 40 7.7
54gb|AC140346.4| Mus musculus BAC clone RP24-260I8 from 16, comple... 40 7.7
55emb|AL591442.2| Zebrafish DNA sequence from clone BUSM1-228J01 i... 40 7.7
56gb|AF117388.1|AF117388 Danio rerio frizzled protein (fz4) mRNA, ... 40 7.7
57emb|AL591180.4| Zebrafish DNA sequence from clone BUSM1-243A08 i... 40 7.7
58gb|U49408.1|DRU49408 Danio rerio Zg04 gene, partial cds 40 7.7
59gb|M57681.1|HSCORILYT Simian cytomegalovirus origin of lytic-pha... 40 7.7
60dbj|D00750.1|HSCDBPA Simian cytomegalovirus gene for single-stra... 40 7.7 
>ref|NM_197929.1| Oryza sativa (japonica cultivar-group) putative ankyrin protein
           (OSJNBa0056G17.5), mRNA
          Length = 993

 Score =  355 bits (179), Expect = 1e-94
 Identities = 305/347 (87%)
 Strand = Plus / Plus

                                                                       
Query: 195 ctgcacaaggctgcgaggtcgggtgatgcggcggcggtggagtcgctttgcgactcggac 254
           ||||||||||| ||| ||||||| |||  |||||||| |||||| || |||||  |  ||
Sbjct: 94  ctgcacaaggccgcgcggtcgggagatttggcggcggcggagtctctgtgcgaggccaac 153

                                                                       
Query: 255 cctctcgccctcaactctagagaccgcctctcccgcaccccactccatctggcggcatgg 314
           |||||||||||||| || ||||| |||||||| ||||||||||||||| |||| ||||||
Sbjct: 154 cctctcgccctcaattccagagatcgcctctctcgcaccccactccatttggcagcatgg 213

                                                                       
Query: 315 gctgggcatgttgatgttgtgaaatgcctttgcaagcacaaagctgatgcgggggctgca 374
           ||||| ||||||||  ||||||| |||||||||||||||||||||||||  || ||||||
Sbjct: 214 gctggacatgttgagcttgtgaagtgcctttgcaagcacaaagctgatgttggagctgca 273

                                                                       
Query: 375 gcaatggatgacaccgcggcaatccattttgcttcccagaaaggtcatttggaagtggtg 434
           || |||||||||||||| || ||||||||||| || |||||||| ||| | || || || 
Sbjct: 274 gctatggatgacaccgctgcgatccattttgcctctcagaaaggccatgtagaggttgtc 333

                                                                       
Query: 435 cgtgagctgctggcatcgggggcctctgtgaaagcaaagaacaggaaaggtttcacagcg 494
           ||||||||||||||||| || ||||||||||||||||||||||||||||| ||||| |||
Sbjct: 334 cgtgagctgctggcatctggtgcctctgtgaaagcaaagaacaggaaaggcttcactgcg 393

                                                          
Query: 495 ttgcactttgctgctcagaactcccacctggagcttgtgaagtattt 541
           |||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 394 ttgcactttgcttcgcagaactcccacctggagcttgtgaagtattt 440
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>dbj|AB110173.1| Oryza sativa (japonica cultivar-group) mRNA for ankyrin, complete
           cds, clone: 13YPB030
          Length = 1035

 Score =  355 bits (179), Expect = 1e-94
 Identities = 305/347 (87%)
 Strand = Plus / Plus

                                                                       
Query: 195 ctgcacaaggctgcgaggtcgggtgatgcggcggcggtggagtcgctttgcgactcggac 254
           ||||||||||| ||| ||||||| |||  |||||||| |||||| || |||||  |  ||
Sbjct: 165 ctgcacaaggccgcgcggtcgggagatttggcggcggcggagtctctgtgcgaggccaac 224

                                                                       
Query: 255 cctctcgccctcaactctagagaccgcctctcccgcaccccactccatctggcggcatgg 314
           |||||||||||||| || ||||| |||||||| ||||||||||||||| |||| ||||||
Sbjct: 225 cctctcgccctcaattccagagatcgcctctctcgcaccccactccatttggcagcatgg 284

                                                                       
Query: 315 gctgggcatgttgatgttgtgaaatgcctttgcaagcacaaagctgatgcgggggctgca 374
           ||||| ||||||||  ||||||| |||||||||||||||||||||||||  || ||||||
Sbjct: 285 gctggacatgttgagcttgtgaagtgcctttgcaagcacaaagctgatgttggagctgca 344

                                                                       
Query: 375 gcaatggatgacaccgcggcaatccattttgcttcccagaaaggtcatttggaagtggtg 434
           || |||||||||||||| || ||||||||||| || |||||||| ||| | || || || 
Sbjct: 345 gctatggatgacaccgctgcgatccattttgcctctcagaaaggccatgtagaggttgtc 404

                                                                       
Query: 435 cgtgagctgctggcatcgggggcctctgtgaaagcaaagaacaggaaaggtttcacagcg 494
           ||||||||||||||||| || ||||||||||||||||||||||||||||| ||||| |||
Sbjct: 405 cgtgagctgctggcatctggtgcctctgtgaaagcaaagaacaggaaaggcttcactgcg 464

                                                          
Query: 495 ttgcactttgctgctcagaactcccacctggagcttgtgaagtattt 541
           |||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 465 ttgcactttgcttcgcagaactcccacctggagcttgtgaagtattt 511
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>dbj|AK071604.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099C19, full
           insert sequence
          Length = 1026

 Score =  347 bits (175), Expect = 2e-92
 Identities = 304/347 (87%)
 Strand = Plus / Plus

                                                                       
Query: 195 ctgcacaaggctgcgaggtcgggtgatgcggcggcggtggagtcgctttgcgactcggac 254
           ||||||||||| ||| ||| ||| |||  |||||||| |||||| || |||||  |  ||
Sbjct: 152 ctgcacaaggccgcgcggtggggagatttggcggcggcggagtctctgtgcgaggccaac 211

                                                                       
Query: 255 cctctcgccctcaactctagagaccgcctctcccgcaccccactccatctggcggcatgg 314
           |||||||||||||| || ||||| |||||||| ||||||||||||||| |||| ||||||
Sbjct: 212 cctctcgccctcaattccagagatcgcctctctcgcaccccactccatttggcagcatgg 271

                                                                       
Query: 315 gctgggcatgttgatgttgtgaaatgcctttgcaagcacaaagctgatgcgggggctgca 374
           ||||| ||||||||  ||||||| |||||||||||||||||||||||||  || ||||||
Sbjct: 272 gctggacatgttgagcttgtgaagtgcctttgcaagcacaaagctgatgttggagctgca 331

                                                                       
Query: 375 gcaatggatgacaccgcggcaatccattttgcttcccagaaaggtcatttggaagtggtg 434
           || |||||||||||||| || ||||||||||| || |||||||| ||| | || || || 
Sbjct: 332 gctatggatgacaccgctgcgatccattttgcctctcagaaaggccatgtagaggttgtc 391

                                                                       
Query: 435 cgtgagctgctggcatcgggggcctctgtgaaagcaaagaacaggaaaggtttcacagcg 494
           ||||||||||||||||| || ||||||||||||||||||||||||||||| ||||| |||
Sbjct: 392 cgtgagctgctggcatctggtgcctctgtgaaagcaaagaacaggaaaggcttcactgcg 451

                                                          
Query: 495 ttgcactttgctgctcagaactcccacctggagcttgtgaagtattt 541
           |||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 452 ttgcactttgcttcgcagaactcccacctggagcttgtgaagtattt 498
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>gb|AC018727.10| Oryza sativa chromosome 10 BAC OSJNBa0056G17 genomic sequence, complete
              sequence
          Length = 139999

 Score =  281 bits (142), Expect = 1e-72
 Identities = 220/246 (89%)
 Strand = Plus / Plus

                                                                          
Query: 296    actccatctggcggcatgggctgggcatgttgatgttgtgaaatgcctttgcaagcacaa 355
              ||||||| |||| ||||||||||| ||||||||  ||||||| |||||||||||||||||
Sbjct: 122985 actccatttggcagcatgggctggacatgttgagcttgtgaagtgcctttgcaagcacaa 123044

                                                                          
Query: 356    agctgatgcgggggctgcagcaatggatgacaccgcggcaatccattttgcttcccagaa 415
              ||||||||  || |||||||| |||||||||||||| || ||||||||||| || |||||
Sbjct: 123045 agctgatgttggagctgcagctatggatgacaccgctgcgatccattttgcctctcagaa 123104

                                                                          
Query: 416    aggtcatttggaagtggtgcgtgagctgctggcatcgggggcctctgtgaaagcaaagaa 475
              ||| ||| | || || || ||||||||||||||||| || ||||||||||||||||||||
Sbjct: 123105 aggccatgtagaggttgtccgtgagctgctggcatctggtgcctctgtgaaagcaaagaa 123164

                                                                          
Query: 476    caggaaaggtttcacagcgttgcactttgctgctcagaactcccacctggagcttgtgaa 535
              ||||||||| ||||| ||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 123165 caggaaaggcttcactgcgttgcactttgcttcgcagaactcccacctggagcttgtgaa 123224

                    
Query: 536    gtattt 541
              ||||||
Sbjct: 123225 gtattt 123230



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 85/101 (84%)
 Strand = Plus / Plus

                                                                          
Query: 195    ctgcacaaggctgcgaggtcgggtgatgcggcggcggtggagtcgctttgcgactcggac 254
              ||||||||||| ||| ||||||| |||  |||||||| |||||| || |||||  |  ||
Sbjct: 120871 ctgcacaaggccgcgcggtcgggagatttggcggcggcggagtctctgtgcgaggccaac 120930

                                                       
Query: 255    cctctcgccctcaactctagagaccgcctctcccgcacccc 295
              |||||||||||||| || ||||| |||||||| ||||||||
Sbjct: 120931 cctctcgccctcaattccagagatcgcctctctcgcacccc 120971
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  281 bits (142), Expect = 1e-72
 Identities = 220/246 (89%)
 Strand = Plus / Plus

                                                                            
Query: 296      actccatctggcggcatgggctgggcatgttgatgttgtgaaatgcctttgcaagcacaa 355
                ||||||| |||| ||||||||||| ||||||||  ||||||| |||||||||||||||||
Sbjct: 22668316 actccatttggcagcatgggctggacatgttgagcttgtgaagtgcctttgcaagcacaa 22668375

                                                                            
Query: 356      agctgatgcgggggctgcagcaatggatgacaccgcggcaatccattttgcttcccagaa 415
                ||||||||  || |||||||| |||||||||||||| || ||||||||||| || |||||
Sbjct: 22668376 agctgatgttggagctgcagctatggatgacaccgctgcgatccattttgcctctcagaa 22668435

                                                                            
Query: 416      aggtcatttggaagtggtgcgtgagctgctggcatcgggggcctctgtgaaagcaaagaa 475
                ||| ||| | || || || ||||||||||||||||| || ||||||||||||||||||||
Sbjct: 22668436 aggccatgtagaggttgtccgtgagctgctggcatctggtgcctctgtgaaagcaaagaa 22668495

                                                                            
Query: 476      caggaaaggtttcacagcgttgcactttgctgctcagaactcccacctggagcttgtgaa 535
                ||||||||| ||||| ||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 22668496 caggaaaggcttcactgcgttgcactttgcttcgcagaactcccacctggagcttgtgaa 22668555

                      
Query: 536      gtattt 541
                ||||||
Sbjct: 22668556 gtattt 22668561



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 85/101 (84%)
 Strand = Plus / Plus

                                                                            
Query: 195      ctgcacaaggctgcgaggtcgggtgatgcggcggcggtggagtcgctttgcgactcggac 254
                ||||||||||| ||| ||||||| |||  |||||||| |||||| || |||||  |  ||
Sbjct: 22666202 ctgcacaaggccgcgcggtcgggagatttggcggcggcggagtctctgtgcgaggccaac 22666261

                                                         
Query: 255      cctctcgccctcaactctagagaccgcctctcccgcacccc 295
                |||||||||||||| || ||||| |||||||| ||||||||
Sbjct: 22666262 cctctcgccctcaattccagagatcgcctctctcgcacccc 22666302



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 213     tcgggtgatgcggcggcggtggag 236
               ||||||||| ||||||||||||||
Sbjct: 5466432 tcgggtgatccggcggcggtggag 5466409
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  281 bits (142), Expect = 1e-72
 Identities = 220/246 (89%)
 Strand = Plus / Plus

                                                                            
Query: 296      actccatctggcggcatgggctgggcatgttgatgttgtgaaatgcctttgcaagcacaa 355
                ||||||| |||| ||||||||||| ||||||||  ||||||| |||||||||||||||||
Sbjct: 22680784 actccatttggcagcatgggctggacatgttgagcttgtgaagtgcctttgcaagcacaa 22680843

                                                                            
Query: 356      agctgatgcgggggctgcagcaatggatgacaccgcggcaatccattttgcttcccagaa 415
                ||||||||  || |||||||| |||||||||||||| || ||||||||||| || |||||
Sbjct: 22680844 agctgatgttggagctgcagctatggatgacaccgctgcgatccattttgcctctcagaa 22680903

                                                                            
Query: 416      aggtcatttggaagtggtgcgtgagctgctggcatcgggggcctctgtgaaagcaaagaa 475
                ||| ||| | || || || ||||||||||||||||| || ||||||||||||||||||||
Sbjct: 22680904 aggccatgtagaggttgtccgtgagctgctggcatctggtgcctctgtgaaagcaaagaa 22680963

                                                                            
Query: 476      caggaaaggtttcacagcgttgcactttgctgctcagaactcccacctggagcttgtgaa 535
                ||||||||| ||||| ||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 22680964 caggaaaggcttcactgcgttgcactttgcttcgcagaactcccacctggagcttgtgaa 22681023

                      
Query: 536      gtattt 541
                ||||||
Sbjct: 22681024 gtattt 22681029



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 85/101 (84%)
 Strand = Plus / Plus

                                                                            
Query: 195      ctgcacaaggctgcgaggtcgggtgatgcggcggcggtggagtcgctttgcgactcggac 254
                ||||||||||| ||| ||||||| |||  |||||||| |||||| || |||||  |  ||
Sbjct: 22678670 ctgcacaaggccgcgcggtcgggagatttggcggcggcggagtctctgtgcgaggccaac 22678729

                                                         
Query: 255      cctctcgccctcaactctagagaccgcctctcccgcacccc 295
                |||||||||||||| || ||||| |||||||| ||||||||
Sbjct: 22678730 cctctcgccctcaattccagagatcgcctctctcgcacccc 22678770



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 213     tcgggtgatgcggcggcggtggag 236
               ||||||||| ||||||||||||||
Sbjct: 5467219 tcgggtgatccggcggcggtggag 5467196
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>gb|AY111430.1| Zea mays CL65354_1 mRNA sequence
          Length = 588

 Score =  119 bits (60), Expect = 1e-23
 Identities = 87/96 (90%)
 Strand = Plus / Minus

                                                                       
Query: 442 tgctggcatcgggggcctctgtgaaagcaaagaacaggaaaggtttcacagcgttgcact 501
           |||||||||| ||||||||||||||||| |||||| ||||||| ||||| ||| ||||||
Sbjct: 588 tgctggcatctggggcctctgtgaaagccaagaaccggaaaggcttcacggcgctgcact 529

                                               
Query: 502 ttgctgctcagaactcccacctggagcttgtgaagt 537
           ||||||||||||| || |||||||| ||||||||||
Sbjct: 528 ttgctgctcagaattctcacctggatcttgtgaagt 493
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>ref|XM_865814.1| PREDICTED: Bos taurus similar to invasion inhibitory protein 45
            isoform 1, transcript variant 1 (LOC614193), mRNA
          Length = 2971

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 515  ctcccacctggagcttgtgaag 536
            ||||||||||||||||||||||
Sbjct: 2229 ctcccacctggagcttgtgaag 2250
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>ref|XM_877016.1| PREDICTED: Bos taurus similar to invasion inhibitory protein 45
            isoform 1, transcript variant 3 (LOC614193), mRNA
          Length = 2437

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 515  ctcccacctggagcttgtgaag 536
            ||||||||||||||||||||||
Sbjct: 1695 ctcccacctggagcttgtgaag 1716
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>ref|XM_876968.1| PREDICTED: Bos taurus similar to invasion inhibitory protein 45
            isoform 1, transcript variant 2 (LOC614193), mRNA
          Length = 3677

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 515  ctcccacctggagcttgtgaag 536
            ||||||||||||||||||||||
Sbjct: 2935 ctcccacctggagcttgtgaag 2956
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>gb|AC101883.6| Mus musculus chromosome 1, clone RP23-402F17, complete sequence
          Length = 191721

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 336    aaatgcctttgcaagcacaaa 356
              |||||||||||||||||||||
Sbjct: 167173 aaatgcctttgcaagcacaaa 167193
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>gb|AE014820.1| Plasmodium falciparum 3D7 chromosome 14 section 5 of 13 of the complete
             sequence
          Length = 250029

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 461   tgtgaaagcaaagaacaggaa 481
             |||||||||||||||||||||
Sbjct: 38778 tgtgaaagcaaagaacaggaa 38758
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>gb|AC093866.3| Homo sapiens BAC clone RP11-582C12 from 4, complete sequence
          Length = 159764

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 527    gcttgtgaagtatttggtgag 547
              |||||||||||||||||||||
Sbjct: 106362 gcttgtgaagtatttggtgag 106342
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>gb|AY022715.1| Oryza sativa microsatellite MRG5040 containing (CCG)X9, closest to
           marker C405, genomic sequence
          Length = 227

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 195 ctgcacaaggctgcgaggtcgggtgatgcggcggcggtggagtc 238
           ||||||||||| ||| ||||||| |||  |||||||| ||||||
Sbjct: 48  ctgcacaaggccgcgcggtcgggagatttggcggcggcggagtc 5
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>gb|BC076546.1| Danio rerio frizzled homolog 10, mRNA (cDNA clone MGC:91791
            IMAGE:7042011), complete cds
          Length = 3005

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 298  tccatctggcggcatgggct 317
            ||||||||||||||||||||
Sbjct: 1598 tccatctggcggcatgggct 1617
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 106      gccgagccggcggcgggggg 125
                ||||||||||||||||||||
Sbjct: 10481073 gccgagccggcggcgggggg 10481092



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 106     gccgagccggcggcgggggg 125
               ||||||||||||||||||||
Sbjct: 8052417 gccgagccggcggcgggggg 8052398
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>gb|AC124367.4| Mus musculus BAC clone RP24-545D20 from chromosome 18, complete
             sequence
          Length = 169912

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 308   ggcatgggctgggcatgttg 327
             ||||||||||||||||||||
Sbjct: 86433 ggcatgggctgggcatgttg 86452
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>gb|AC133957.2| Mus musculus BAC clone RP23-367D8 from chromosome 3, complete sequence
          Length = 99713

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 401   ttttgcttcccagaaaggtcattt 424
             |||||||||||| |||||||||||
Sbjct: 44580 ttttgcttcccacaaaggtcattt 44603
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>gb|AC122021.2| Mus musculus BAC clone RP24-366N1 from 3, complete sequence
          Length = 186873

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 401  ttttgcttcccagaaaggtcattt 424
            |||||||||||| |||||||||||
Sbjct: 6213 ttttgcttcccacaaaggtcattt 6190
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>emb|CR719754.2|CNS0GIB4 Tetraodon nigroviridis full-length cDNA
          Length = 771

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 247 actcggaccctctcgccctc 266
           ||||||||||||||||||||
Sbjct: 467 actcggaccctctcgccctc 448
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>emb|CR718320.2|CNS0GH7A Tetraodon nigroviridis full-length cDNA
          Length = 796

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 247 actcggaccctctcgccctc 266
           ||||||||||||||||||||
Sbjct: 487 actcggaccctctcgccctc 468
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>gb|AC004690.2| Homo sapiens PAC clone RP4-630C24 from 7, complete sequence
          Length = 142123

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    gtgtgagagagatggggaga 104
             ||||||||||||||||||||
Sbjct: 58509 gtgtgagagagatggggaga 58528
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>gb|U53181.1| Caenorhabditis elegans cosmid F36D4, complete sequence
          Length = 42041

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 399   cattttgcttcccagaaagg 418
             ||||||||||||||||||||
Sbjct: 39582 cattttgcttcccagaaagg 39563
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>gb|AC142338.1| Pan troglodytes BAC clone RP43-41H4 from 7, complete sequence
          Length = 186208

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 407    ttcccagaaaggtcatttgg 426
              ||||||||||||||||||||
Sbjct: 135418 ttcccagaaaggtcatttgg 135437
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>emb|CR450819.7| Zebrafish DNA sequence from clone DKEY-245G2 in linkage group 8, complete
              sequence
          Length = 168244

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 298    tccatctggcggcatgggct 317
              ||||||||||||||||||||
Sbjct: 144395 tccatctggcggcatgggct 144376
to top
>gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0039F10,
              complete sequence
          Length = 139714

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 106    gccgagccggcggcgggggg 125
              ||||||||||||||||||||
Sbjct: 137626 gccgagccggcggcgggggg 137645
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>gb|AC130186.4| Atelerix albiventris clone LB4-244I20, complete sequence
          Length = 150635

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 470   aaagaacaggaaaggtttca 489
             ||||||||||||||||||||
Sbjct: 71785 aaagaacaggaaaggtttca 71804
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>emb|CR788314.7| Zebrafish DNA sequence from clone DKEY-205J18 in linkage group 8,
              complete sequence
          Length = 164950

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 298    tccatctggcggcatgggct 317
              ||||||||||||||||||||
Sbjct: 121698 tccatctggcggcatgggct 121679
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>emb|CR450726.6| Zebrafish DNA sequence from clone CH211-149F21 in linkage group 5,
             complete sequence
          Length = 93211

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 89    gagagagatggggagacgccgagc 112
             |||||||||| |||||||||||||
Sbjct: 78495 gagagagatgaggagacgccgagc 78472
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>gb|AC118668.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0036G02, from chromosome 3, complete sequence
          Length = 153308

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   gccgagccggcggcgggggg 125
             ||||||||||||||||||||
Sbjct: 36886 gccgagccggcggcgggggg 36905
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>gb|AC024086.5| Homo sapiens chromosome 7 clone RP11-242F21, complete sequence
          Length = 153232

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 407    ttcccagaaaggtcatttgg 426
              ||||||||||||||||||||
Sbjct: 116641 ttcccagaaaggtcatttgg 116660
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>gb|AC093568.2| Oryza sativa chromosome 10 clone OSJNBa0029P16, complete sequence
          Length = 173644

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 213   tcgggtgatgcggcggcggtggag 236
             ||||||||| ||||||||||||||
Sbjct: 77216 tcgggtgatccggcggcggtggag 77239
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>ref|XM_694196.1| PREDICTED: Danio rerio similar to KPL2 protein isoform 1
           (LOC570688), partial mRNA
          Length = 2277

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 89  gagagagatggggagacgccgagc 112
           |||||||||| |||||||||||||
Sbjct: 739 gagagagatgaggagacgccgagc 762
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>gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold
          Length = 2136267

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 470    aaagaacaggaaaggtttca 489
              ||||||||||||||||||||
Sbjct: 832691 aaagaacaggaaaggtttca 832710
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>gb|AC154419.2| Mus musculus BAC clone RP24-212C1 from chromosome 14, complete sequence
          Length = 167114

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 469   caaagaacaggaaaggtttc 488
             ||||||||||||||||||||
Sbjct: 36134 caaagaacaggaaaggtttc 36115
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>gb|AC153870.8| Mus musculus 10 BAC RP23-473J14 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 164663

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 462    gtgaaagcaaagaacaggaa 481
              ||||||||||||||||||||
Sbjct: 100665 gtgaaagcaaagaacaggaa 100684
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>gb|BC093156.1| Danio rerio hypothetical protein LOC553375, mRNA (cDNA clone
            IMAGE:7406975), partial cds
          Length = 2317

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 89   gagagagatggggagacgccgagc 112
            |||||||||| |||||||||||||
Sbjct: 1007 gagagagatgaggagacgccgagc 1030
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 106      gccgagccggcggcgggggg 125
                ||||||||||||||||||||
Sbjct: 10479174 gccgagccggcggcgggggg 10479193



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 106     gccgagccggcggcgggggg 125
               ||||||||||||||||||||
Sbjct: 8050252 gccgagccggcggcgggggg 8050233
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 215      gggtgatgcggcggcggtgg 234
                ||||||||||||||||||||
Sbjct: 16614298 gggtgatgcggcggcggtgg 16614317
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>gb|AC149788.2| Pan troglodytes BAC clone CH251-63L13 from chromosome 7, complete
              sequence
          Length = 171501

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 407    ttcccagaaaggtcatttgg 426
              ||||||||||||||||||||
Sbjct: 165421 ttcccagaaaggtcatttgg 165402
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>ref|NM_131136.1| Danio rerio frizzled homolog 10 (fzd10), mRNA
          Length = 1743

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 298  tccatctggcggcatgggct 317
            ||||||||||||||||||||
Sbjct: 1061 tccatctggcggcatgggct 1080
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>ref|NM_130917.1| Danio rerio frizzled homolog 10 (fzd10), mRNA
          Length = 2926

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 298  tccatctggcggcatgggct 317
            ||||||||||||||||||||
Sbjct: 1523 tccatctggcggcatgggct 1542
to top
>gb|AC022506.38| Homo sapiens 12 BAC RP11-181L23 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 172136

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 489   acagcgttgcactttgctgctcag 512
             |||| |||||||||||||||||||
Sbjct: 48173 acagagttgcactttgctgctcag 48150
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>gb|AC134240.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0081I10,
              complete sequence
          Length = 143298

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 106    gccgagccggcggcgggggg 125
              ||||||||||||||||||||
Sbjct: 119780 gccgagccggcggcgggggg 119761
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>gb|AE004705.1| Pseudomonas aeruginosa PAO1, section 266 of 529 of the complete
            genome
          Length = 10369

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 222  gcggcggcggtggagtcgct 241
            ||||||||||||||||||||
Sbjct: 4917 gcggcggcggtggagtcgct 4936
to top
>gb|AC009358.6|AC009358 Human Chromosome 7 clone RP11-191E5, complete sequence
          Length = 185124

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 407    ttcccagaaaggtcatttgg 426
              ||||||||||||||||||||
Sbjct: 113046 ttcccagaaaggtcatttgg 113065
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>gb|AC167668.1| Mus musculus BAC clone RP24-241I19 from chromosome 14, complete
             sequence
          Length = 173679

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 469   caaagaacaggaaaggtttc 488
             ||||||||||||||||||||
Sbjct: 22235 caaagaacaggaaaggtttc 22254
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>gb|AC091301.3| Danio rerio clone 1K20, complete sequence
          Length = 48082

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 298  tccatctggcggcatgggct 317
            ||||||||||||||||||||
Sbjct: 9843 tccatctggcggcatgggct 9862
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>gb|AF039411.1|AF039411 Danio rerio frizzled homolog (zfzB) mRNA, complete cds
          Length = 2926

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 298  tccatctggcggcatgggct 317
            ||||||||||||||||||||
Sbjct: 1523 tccatctggcggcatgggct 1542
to top
>dbj|AP004884.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0519B12
          Length = 147542

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 215   gggtgatgcggcggcggtgg 234
             ||||||||||||||||||||
Sbjct: 56265 gggtgatgcggcggcggtgg 56284
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>dbj|AK109960.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-159-B06, full
            insert sequence
          Length = 3892

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 220  atgcggcggcggtggagtcg 239
            ||||||||||||||||||||
Sbjct: 2104 atgcggcggcggtggagtcg 2123
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>gb|AC131741.4| Mus musculus BAC clone RP23-66E21 from 7, complete sequence
          Length = 193738

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 463    tgaaagcaaagaacaggaaa 482
              ||||||||||||||||||||
Sbjct: 149440 tgaaagcaaagaacaggaaa 149459
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>gb|AC122222.6| Mus musculus BAC clone RP23-128D11 from 7, complete sequence
          Length = 212225

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 463   tgaaagcaaagaacaggaaa 482
             ||||||||||||||||||||
Sbjct: 19091 tgaaagcaaagaacaggaaa 19110
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>gb|AC140346.4| Mus musculus BAC clone RP24-260I8 from 16, complete sequence
          Length = 185587

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 466    aagcaaagaacaggaaaggtttca 489
              |||||||||||||||||| |||||
Sbjct: 115504 aagcaaagaacaggaaagctttca 115527
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>emb|AL591442.2| Zebrafish DNA sequence from clone BUSM1-228J01 in linkage group 8,
             complete sequence
          Length = 99866

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 298   tccatctggcggcatgggct 317
             ||||||||||||||||||||
Sbjct: 15831 tccatctggcggcatgggct 15812
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>gb|AF117388.1|AF117388 Danio rerio frizzled protein (fz4) mRNA, complete cds
          Length = 1743

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 298  tccatctggcggcatgggct 317
            ||||||||||||||||||||
Sbjct: 1061 tccatctggcggcatgggct 1080
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>emb|AL591180.4| Zebrafish DNA sequence from clone BUSM1-243A08 in linkage group 8
             Contains a novel and partly predicted gene for a protein
             similar to major histocompatibility complex class II DCB
             gene (mhc2dcb), MHC2DBC related sequence (mhc2dbc-rs),
             part of a novel gene for a protein similar to MHC class II
             alpha chain, the fzd10 gene for frizzled homologue 10 and
             a GpC island, complete sequence
          Length = 80272

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 298   tccatctggcggcatgggct 317
             ||||||||||||||||||||
Sbjct: 68280 tccatctggcggcatgggct 68299
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>gb|U49408.1|DRU49408 Danio rerio Zg04 gene, partial cds
          Length = 546

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 298 tccatctggcggcatgggct 317
           ||||||||||||||||||||
Sbjct: 296 tccatctggcggcatgggct 315
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>gb|M57681.1|HSCORILYT Simian cytomegalovirus origin of lytic-phase replication (oriLyt)
          Length = 2256

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 105 cgccgagccggcggcggggggcgc 128
           |||||||||||||||||| |||||
Sbjct: 128 cgccgagccggcggcgggtggcgc 105
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>dbj|D00750.1|HSCDBPA Simian cytomegalovirus gene for single-stranded DNA-binding
           protein, complete cds
          Length = 3780

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 105 cgccgagccggcggcggggggcgc 128
           |||||||||||||||||| |||||
Sbjct: 46  cgccgagccggcggcgggtggcgc 69


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,031,653
Number of Sequences: 3902068
Number of extensions: 4031653
Number of successful extensions: 84983
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84462
Number of HSP's gapped (non-prelim): 521
length of query: 569
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 546
effective length of database: 17,143,297,704
effective search space: 9360240546384
effective search space used: 9360240546384
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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