>B3GT6_HUMAN (Q96L58) Beta-1,3-galactosyltransferase 6 (EC 2.4.1.134) (beta|
           3GalT6) (Galactosylxylosylprotein
           3-beta-galactosyltransferase) (UDP-Gal:betaGal beta
           1,3-galactosyltransferase polypeptide 6)
           (Galactosyltransferase II) (GAG GalTII)
          Length = 329

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 6/149 (4%)
 Frame = +3

Query: 135 GLGVLCTRRAGA--GQYTGVSARAEAEDVPEPELSLL-VGILTMPKRRERRDIVRLAYAL 305
           G  +L   R  A  G    +S R+     P    + L V + + P+  ERR ++R  +  
Sbjct: 23  GAALLYLARCAAEPGDPRAMSGRSPPPPAPARAAAFLAVLVASAPRAAERRSVIRSTWLA 82

Query: 306 QPPPAAGARVDVRFVFCNVTDPV---EAALVALEIMRHGDIIVLDCAENMNDGXTYAYFS 476
           +     GA  DV   F   T  +   E   +  E  RHGD+++L    +  +  T    +
Sbjct: 83  R----RGAPGDVWARFAVGTAGLGAEERRALEREQARHGDLLLLPALRDAYENLTAKVLA 138

Query: 477 SVPRLFAAAPYDYVMKTDDDTYLRVAALV 563
            +  L     +++V+K DDD++ R+ AL+
Sbjct: 139 MLAWLDEHVAFEFVLKADDDSFARLDALL 167

>PVG3_SCHPO (Q9USX0) Beta-1,3-galactosyltransferase pvg3 (EC 2.4.1.134)|
           (Pyruvylated Gal-beta-1,3-epitope synthesis protein 3)
           (PvGal synthesis protein 3)
          Length = 378

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
 Frame = +3

Query: 198 AEAEDVPEPELSLLVGILTMPKRRERRDIVRLAYALQPPP-AAGARVDVRFVFCNVTDPV 374
           A A D P     L +GI +  K  +RR+ +R  Y       A    VDVRF+     +  
Sbjct: 57  AHANDRP---FKLYLGIFSQAKNVDRRNFLRTDYNEYIKEFAVNDTVDVRFILGLPENEQ 113

Query: 375 EAALVALEIMRHGDIIVLDCAENMNDGXTYAYFSS 479
           E A +  E   +GD+ VL   EN++ G +  YF +
Sbjct: 114 ELATIREEQRTYGDLAVLPIPENVDAGKSIVYFQT 148

>SQV2_CAEEL (Q9N491) Beta-1,3-galactosyltransferase sqv-2 (EC 2.4.1.134)|
           (Squashed vulva protein 2)
          Length = 330

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 3/117 (2%)
 Frame = +3

Query: 222 PELSLLVGILTMPKRRERRDIVRLAY---ALQPPPAAGARVDVRFVFCNVTDPVEAALVA 392
           PE  L + ILT P   ERR  VR  +   + + P    A+  V  +     D     L+A
Sbjct: 56  PETFLYISILTSPNETERRQNVRDTWFRLSTKGPSVFIAKFAVGTMGLAAED---RRLLA 112

Query: 393 LEIMRHGDIIVLDCAENMNDGXTYAYFSSVPRLFAAAPYDYVMKTDDDTYLRVAALV 563
            E  + GD+ +LD  E   +       +     FA   + + +KTD D+++R+  L+
Sbjct: 113 EENEKFGDLALLDRHEESYERLAKKTLACFVHAFANFKFKFFLKTDIDSFVRITPLI 169

>B3GT4_HUMAN (O96024) Beta-1,3-galactosyltransferase 4 (EC 2.4.1.62)|
           (Beta-1,3-GalTase 4) (Beta3Gal-T4) (b3Gal-T4)
           (Ganglioside galactosyltransferase)
           (UDP-galactose:beta-N-acetyl-galactosamine-beta-1,
           3-galactosyltransferase) (GAL-T2) (GalT4)
          Length = 378

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 6/116 (5%)
 Frame = +3

Query: 234 LLVGILTMPKRRERRDIVRLAYALQPPPAAGARVDVRFVFC--NVTDPV---EAALVALE 398
           LL+ + T P+   +R+ +R ++      A G RV   F+    N   PV   + + +A E
Sbjct: 73  LLILVCTAPENLNQRNAIRASWG-GLREARGLRVQTLFLLGEPNAQHPVWGSQGSDLASE 131

Query: 399 IMRHGDIIVLDCAENMNDGXTYAYFSSVPRLFAAAPYD-YVMKTDDDTYLRVAALV 563
               GDI+     ++  +  T    S +       P   YV+KTDDD Y+ V  LV
Sbjct: 132 SAAQGDILQAAFQDSYRN-LTLKTLSGLNWAEKHCPMARYVLKTDDDVYVNVPELV 186

>B3GT4_MOUSE (Q9Z0F0) Beta-1,3-galactosyltransferase 4 (EC 2.4.1.62)|
           (Beta-1,3-GalTase 4) (Beta3Gal-T4) (b3Gal-T4)
           (Ganglioside galactosyltransferase)
           (UDP-galactose:beta-N-acetyl-galactosamine-beta-1,
           3-galactosyltransferase) (GAL-T2)
          Length = 371

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
 Frame = +3

Query: 222 PELSLLVGILTMPKRRERRDIVRLAYALQPPPAAGARVDVRFVFCNVTDPVEAALVALEI 401
           P   LL+ + T P+   +R+ +R ++      A G RV   F+        + A ++ E 
Sbjct: 69  PPPFLLILVCTAPEHLNQRNAIRASWGAIRE-ARGFRVQTLFLLGKPRRQ-QLADLSSES 126

Query: 402 MRHGDIIVLDCAENMNDGXTYAYFSSVPRLFAAAPYD-YVMKTDDDTYLRVAALV 563
             H DI+     ++  +  T    S +  +    P   Y++KTDDD Y+ V  LV
Sbjct: 127 AAHRDILQASFQDSYRN-LTLKTLSGLNWVNKYCPMARYILKTDDDVYVNVPELV 180

>COTD_BACSU (P07791) Spore coat protein D|
          Length = 75

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 14/40 (35%), Positives = 17/40 (42%)
 Frame = +2

Query: 5   HSIKSTGHDHDEGAHVHLLPHPGSRRDPAPRLPALIAQPC 124
           H   +T  +H    HVH  PH  S  DPA        +PC
Sbjct: 33  HPQHTTNVNHQHFQHVHYFPHTFSNVDPATHQHFQAGKPC 72

>B3GT4_RAT (O88178) Beta-1,3-galactosyltransferase 4 (EC 2.4.1.62)|
           (Beta-1,3-GalTase 4) (Beta3Gal-T4) (b3Gal-T4)
           (Ganglioside galactosyltransferase)
           (UDP-galactose:beta-N-acetyl-galactosamine-beta-1,
           3-galactosyltransferase) (GAL-T2)
          Length = 371

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 3/117 (2%)
 Frame = +3

Query: 222 PELSLLVGILTMPKRRERRDIVRLAYALQPPPAAGARVDVRFVFCNVTDPV--EAALVAL 395
           P   LL+ + T P+   +R+ +R ++      A G RV   F+   + +P+  + A +A 
Sbjct: 69  PPPFLLILVCTAPEHLNQRNAIRGSWGAIRE-ARGFRVQTLFL---LGEPMGQQFADLAS 124

Query: 396 EIMRHGDIIVLDCAENMNDGXTYAYFSSVPRLFAAAPYD-YVMKTDDDTYLRVAALV 563
           E    GD++     ++  +  T    + +  +    P   Y++KTDDD Y+ V  LV
Sbjct: 125 ESAAQGDVLQASFQDSYRN-LTLKTLTGLNWVNKYCPMARYILKTDDDVYVNVPELV 180

>GYRB_CAUCR (P48197) DNA gyrase subunit B (EC 5.99.1.3)|
          Length = 805

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 26/95 (27%), Positives = 40/95 (42%)
 Frame = +3

Query: 126 GSDGLGVLCTRRAGAGQYTGVSARAEAEDVPEPELSLLVGILTMPKRRERRDIVRLAYAL 305
           G D L ++ T R+       ++ARA A  + +  LS L+G    P        + L    
Sbjct: 593 GQDLLALVQTCRSAKANIDRLAARAPATAIEQAALSGLLG--ESPNAAAAATRLDLYAEE 650

Query: 306 QPPPAAGARVDVRFVFCNVTDPVEAALVALEIMRH 410
              P +G R D  FVF  V   V   +V  +++ H
Sbjct: 651 GDGPWSGERGDTGFVFSRVRRGVSERVVLDDVLLH 685

>FOG1_MOUSE (O35615) Zinc finger protein ZFPM1 (Zinc finger protein multitype|
           1) (Friend of GATA protein 1) (Friend of GATA-1) (FOG-1)
          Length = 995

 Score = 25.0 bits (53), Expect(2) = 9.4
 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = +3

Query: 249 LTMP--KRRERRDIVRLAYALQPPPAAG 326
           LT P  + R RR +  L  A  PPPAAG
Sbjct: 744 LTAPPVRTRRRRKLYELPAAGAPPPAAG 771



 Score = 22.3 bits (46), Expect(2) = 9.4
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = +2

Query: 68  PGSRRDPAPRLPALIAQPCRLR 133
           P     P P  PAL A P R R
Sbjct: 731 PAPTTAPGPAAPALTAPPVRTR 752


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,855,878
Number of Sequences: 219361
Number of extensions: 796510
Number of successful extensions: 3491
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3484
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4643056080
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)