ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart57c12 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 293 bits (148), Expect = 3e-76 Identities = 295/343 (86%), Gaps = 6/343 (1%) Strand = Plus / Minus Query: 220 agccggagctgagcctgctggtcggcatcctgacgatgccgaagcggcgggagcggcgcg 279 |||| |||||||||||||| |||||| |||||||||||||||||||| ||||| |||| Sbjct: 15843048 agcccgagctgagcctgctcgtcggcgtcctgacgatgccgaagcggtacgagcgccgcg 15842989 Query: 280 acatcgtgcggctggcgtacgcgctgcagccgccgccggcggcgggcgcgcgggtggacg 339 |||||||||||||||||||||||||||| |||| |||||||| | ||||||||||||| Sbjct: 15842988 acatcgtgcggctggcgtacgcgctgca---gccggcggcggcgcgggcgcgggtggacg 15842932 Query: 340 tgcgcttcgtgttctgcaacgtgacggacccggtggaggcggcgctggtggcgctggaga 399 | ||||||||||||||| |||| | ||||||||||| ||| |||||||||||||||| Sbjct: 15842931 tccgcttcgtgttctgccgcgtggccgacccggtggacgcgcagctggtggcgctggagg 15842872 Query: 400 tcatgcggcacggcgacatcatcgtgct---cgactgcgccgagaacatgaacgacggcn 456 | ||| ||||||||| || | ||||| || ||||| |||||||||||| ||||| Sbjct: 15842871 ccgcgcgccacggcgacgtcgtggtgctcggcggctgcgaggagaacatgaaccacggca 15842812 Query: 457 agacgtacgcctacttctcgtccgtgccgcggctgttcgcggcggcgccctacgactacg 516 ||||| |||| ||| |||| ||||||||||| ||||||||| || | ||||||||||||| Sbjct: 15842811 agacgcacgcgtacctctcctccgtgccgcgcctgttcgcgtcgtccccctacgactacg 15842752 Query: 517 tgatgaagaccgacgacgacacgtacctgcgggtggcggcgct 559 | |||||||||||||||||||||||||| || ||||||||||| Sbjct: 15842751 tcatgaagaccgacgacgacacgtacctccgcgtggcggcgct 15842709 Score = 250 bits (126), Expect = 4e-63 Identities = 271/318 (85%), Gaps = 5/318 (1%) Strand = Plus / Minus Query: 249 ctgacgatgccgaagcggcgggagcggcgcgacatcgtgcggctggcgtacgcgctgcag 308 ||||||| |||||||||| ||||| ||| |||||||||| |||||||||||||||||| Sbjct: 15837985 ctgacgacgccgaagcggtacgagcgtcgcaacatcgtgcgcctggcgtacgcgctgcag 15837926 Query: 309 ccgccg----ccggcggcgggcgcgcgggtggacgtgcgcttcgtgttctgcaacgtgac 364 ||| || || ||||| ||||| ||||||||| ||||||||||||||| |||| | Sbjct: 15837925 ccggcggtgccccccggcgt-cgcgcaggtggacgtccgcttcgtgttctgccgcgtggc 15837867 Query: 365 ggacccggtggaggcggcgctggtggcgctggagatcatgcggcacggcgacatcatcgt 424 ||||||||||| ||| |||||||| ||||||| | |||||||||||||||| | || Sbjct: 15837866 cgacccggtggacgcgcagctggtggtgctggaggccgcgcggcacggcgacatcctggt 15837807 Query: 425 gctcgactgcgccgagaacatgaacgacggcnagacgtacgcctacttctcgtccgtgcc 484 |||| ||||| | |||||||||||||||||| ||||| ||| ||| |||| |||||||| Sbjct: 15837806 gctcaactgcacggagaacatgaacgacggcaagacgcacgagtacctctcctccgtgcc 15837747 Query: 485 gcggctgttcgcggcggcgccctacgactacgtgatgaagaccgacgacgacacgtacct 544 |||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15837746 gcggatgttcgcgtcgtcgccctacgactacgtgatgaagaccgacgacgacacgtacct 15837687 Query: 545 gcgggtggcggcgctggt 562 || ||||| |||||||| Sbjct: 15837686 ccgcgtggccgcgctggt 15837669 Score = 172 bits (87), Expect = 8e-40 Identities = 243/296 (82%), Gaps = 12/296 (4%) Strand = Plus / Minus Query: 270 gagcggcgcgacatcgtgcggctggcgtacgcgctgcagccgccgccggcggcgggcgcg 329 |||||||||| |||| |||| |||||||||||||||||||| |||||| |||| Sbjct: 15856232 gagcggcgcggcatcctgcgcctggcgtacgcgctgcagcccgcgccgggggcg------ 15856179 Query: 330 cgggtggacgtgcgcttcgtgttctgcaacgtgacggacccggtggaggcggcgctggtg 389 | |||||||||||| |||||| | ||| ||||||||||| | | ||| |||| ||||||| Sbjct: 15856178 caggtggacgtgcggttcgtgctgtgcgacgtgacggacgccgcggacgcggtgctggtg 15856119 Query: 390 gcgctggagatcatgcggcacggcgacatcatcgtgctcgactgcg------ccgagaac 443 ||| |||| |||||||||||||||| | ||||||||| || |||||||| Sbjct: 15856118 gcggcggaggcggcgcggcacggcgacatcctggtgctcgacggctgcagtaccgagaac 15856059 Query: 444 atgaacgacggcnagacgtacgcctacttctcgtccgtgccgcggctgttcgcggcggcg 503 |||||||||||| ||||| |||| ||| |||| ||||||||||| ||||||||| || Sbjct: 15856058 atgaacgacggcaagacgcacgcgtacctctcctccgtgccgcgcctgttcgcgccgtgc 15855999 Query: 504 ccctacgactacgtgatgaagaccgacgacgacacgtacctgcgggtggcggcgct 559 |||||||||||||| |||||| ||||||||||||||||||| || ||||||||||| Sbjct: 15855998 ccctacgactacgtcatgaaggccgacgacgacacgtacctccgcgtggcggcgct 15855943 Score = 58.0 bits (29), Expect = 3e-05 Identities = 98/120 (81%), Gaps = 6/120 (5%) Strand = Plus / Minus Query: 425 gctcgactgcgccgagaacatgaacgacggcnagacgtacgcctacttctcgtccgtgcc 484 |||||||||| | ||||||||| || ||||| |||| ||||||||||||| |||||| Sbjct: 15859982 gctcgactgcccggagaacatggacaacggcaagacccacgcctacttctccagcgtgcc 15859923 Query: 485 gcggctgttc-gcggcggcg-----ccctacgactacgtgatgaagaccgacgacgacac 538 ||| || ||| ||||||||| ||||||||| ||| |||||| ||||||||||||| Sbjct: 15859922 gcgcctcttcggcggcggcgaagccgcctacgacttcgtcatgaaggccgacgacgacac 15859863 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 gcagccgccgccggcggcgg 324 |||||||||||||||||||| Sbjct: 15729999 gcagccgccgccggcggcgg 15729980
>dbj|AP005747.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0039E17 Length = 144126 Score = 293 bits (148), Expect = 3e-76 Identities = 295/343 (86%), Gaps = 6/343 (1%) Strand = Plus / Minus Query: 220 agccggagctgagcctgctggtcggcatcctgacgatgccgaagcggcgggagcggcgcg 279 |||| |||||||||||||| |||||| |||||||||||||||||||| ||||| |||| Sbjct: 128234 agcccgagctgagcctgctcgtcggcgtcctgacgatgccgaagcggtacgagcgccgcg 128175 Query: 280 acatcgtgcggctggcgtacgcgctgcagccgccgccggcggcgggcgcgcgggtggacg 339 |||||||||||||||||||||||||||| |||| |||||||| | ||||||||||||| Sbjct: 128174 acatcgtgcggctggcgtacgcgctgca---gccggcggcggcgcgggcgcgggtggacg 128118 Query: 340 tgcgcttcgtgttctgcaacgtgacggacccggtggaggcggcgctggtggcgctggaga 399 | ||||||||||||||| |||| | ||||||||||| ||| |||||||||||||||| Sbjct: 128117 tccgcttcgtgttctgccgcgtggccgacccggtggacgcgcagctggtggcgctggagg 128058 Query: 400 tcatgcggcacggcgacatcatcgtgct---cgactgcgccgagaacatgaacgacggcn 456 | ||| ||||||||| || | ||||| || ||||| |||||||||||| ||||| Sbjct: 128057 ccgcgcgccacggcgacgtcgtggtgctcggcggctgcgaggagaacatgaaccacggca 127998 Query: 457 agacgtacgcctacttctcgtccgtgccgcggctgttcgcggcggcgccctacgactacg 516 ||||| |||| ||| |||| ||||||||||| ||||||||| || | ||||||||||||| Sbjct: 127997 agacgcacgcgtacctctcctccgtgccgcgcctgttcgcgtcgtccccctacgactacg 127938 Query: 517 tgatgaagaccgacgacgacacgtacctgcgggtggcggcgct 559 | |||||||||||||||||||||||||| || ||||||||||| Sbjct: 127937 tcatgaagaccgacgacgacacgtacctccgcgtggcggcgct 127895 Score = 250 bits (126), Expect = 4e-63 Identities = 271/318 (85%), Gaps = 5/318 (1%) Strand = Plus / Minus Query: 249 ctgacgatgccgaagcggcgggagcggcgcgacatcgtgcggctggcgtacgcgctgcag 308 ||||||| |||||||||| ||||| ||| |||||||||| |||||||||||||||||| Sbjct: 123171 ctgacgacgccgaagcggtacgagcgtcgcaacatcgtgcgcctggcgtacgcgctgcag 123112 Query: 309 ccgccg----ccggcggcgggcgcgcgggtggacgtgcgcttcgtgttctgcaacgtgac 364 ||| || || ||||| ||||| ||||||||| ||||||||||||||| |||| | Sbjct: 123111 ccggcggtgccccccggcgt-cgcgcaggtggacgtccgcttcgtgttctgccgcgtggc 123053 Query: 365 ggacccggtggaggcggcgctggtggcgctggagatcatgcggcacggcgacatcatcgt 424 ||||||||||| ||| |||||||| ||||||| | |||||||||||||||| | || Sbjct: 123052 cgacccggtggacgcgcagctggtggtgctggaggccgcgcggcacggcgacatcctggt 122993 Query: 425 gctcgactgcgccgagaacatgaacgacggcnagacgtacgcctacttctcgtccgtgcc 484 |||| ||||| | |||||||||||||||||| ||||| ||| ||| |||| |||||||| Sbjct: 122992 gctcaactgcacggagaacatgaacgacggcaagacgcacgagtacctctcctccgtgcc 122933 Query: 485 gcggctgttcgcggcggcgccctacgactacgtgatgaagaccgacgacgacacgtacct 544 |||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122932 gcggatgttcgcgtcgtcgccctacgactacgtgatgaagaccgacgacgacacgtacct 122873 Query: 545 gcgggtggcggcgctggt 562 || ||||| |||||||| Sbjct: 122872 ccgcgtggccgcgctggt 122855 Score = 172 bits (87), Expect = 8e-40 Identities = 243/296 (82%), Gaps = 12/296 (4%) Strand = Plus / Minus Query: 270 gagcggcgcgacatcgtgcggctggcgtacgcgctgcagccgccgccggcggcgggcgcg 329 |||||||||| |||| |||| |||||||||||||||||||| |||||| |||| Sbjct: 141418 gagcggcgcggcatcctgcgcctggcgtacgcgctgcagcccgcgccgggggcg------ 141365 Query: 330 cgggtggacgtgcgcttcgtgttctgcaacgtgacggacccggtggaggcggcgctggtg 389 | |||||||||||| |||||| | ||| ||||||||||| | | ||| |||| ||||||| Sbjct: 141364 caggtggacgtgcggttcgtgctgtgcgacgtgacggacgccgcggacgcggtgctggtg 141305 Query: 390 gcgctggagatcatgcggcacggcgacatcatcgtgctcgactgcg------ccgagaac 443 ||| |||| |||||||||||||||| | ||||||||| || |||||||| Sbjct: 141304 gcggcggaggcggcgcggcacggcgacatcctggtgctcgacggctgcagtaccgagaac 141245 Query: 444 atgaacgacggcnagacgtacgcctacttctcgtccgtgccgcggctgttcgcggcggcg 503 |||||||||||| ||||| |||| ||| |||| ||||||||||| ||||||||| || Sbjct: 141244 atgaacgacggcaagacgcacgcgtacctctcctccgtgccgcgcctgttcgcgccgtgc 141185 Query: 504 ccctacgactacgtgatgaagaccgacgacgacacgtacctgcgggtggcggcgct 559 |||||||||||||| |||||| ||||||||||||||||||| || ||||||||||| Sbjct: 141184 ccctacgactacgtcatgaaggccgacgacgacacgtacctccgcgtggcggcgct 141129 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 gcagccgccgccggcggcgg 324 |||||||||||||||||||| Sbjct: 15185 gcagccgccgccggcggcgg 15166
>dbj|AP005551.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1081_G10 Length = 107955 Score = 293 bits (148), Expect = 3e-76 Identities = 295/343 (86%), Gaps = 6/343 (1%) Strand = Plus / Minus Query: 220 agccggagctgagcctgctggtcggcatcctgacgatgccgaagcggcgggagcggcgcg 279 |||| |||||||||||||| |||||| |||||||||||||||||||| ||||| |||| Sbjct: 6174 agcccgagctgagcctgctcgtcggcgtcctgacgatgccgaagcggtacgagcgccgcg 6115 Query: 280 acatcgtgcggctggcgtacgcgctgcagccgccgccggcggcgggcgcgcgggtggacg 339 |||||||||||||||||||||||||||| |||| |||||||| | ||||||||||||| Sbjct: 6114 acatcgtgcggctggcgtacgcgctgca---gccggcggcggcgcgggcgcgggtggacg 6058 Query: 340 tgcgcttcgtgttctgcaacgtgacggacccggtggaggcggcgctggtggcgctggaga 399 | ||||||||||||||| |||| | ||||||||||| ||| |||||||||||||||| Sbjct: 6057 tccgcttcgtgttctgccgcgtggccgacccggtggacgcgcagctggtggcgctggagg 5998 Query: 400 tcatgcggcacggcgacatcatcgtgct---cgactgcgccgagaacatgaacgacggcn 456 | ||| ||||||||| || | ||||| || ||||| |||||||||||| ||||| Sbjct: 5997 ccgcgcgccacggcgacgtcgtggtgctcggcggctgcgaggagaacatgaaccacggca 5938 Query: 457 agacgtacgcctacttctcgtccgtgccgcggctgttcgcggcggcgccctacgactacg 516 ||||| |||| ||| |||| ||||||||||| ||||||||| || | ||||||||||||| Sbjct: 5937 agacgcacgcgtacctctcctccgtgccgcgcctgttcgcgtcgtccccctacgactacg 5878 Query: 517 tgatgaagaccgacgacgacacgtacctgcgggtggcggcgct 559 | |||||||||||||||||||||||||| || ||||||||||| Sbjct: 5877 tcatgaagaccgacgacgacacgtacctccgcgtggcggcgct 5835 Score = 250 bits (126), Expect = 4e-63 Identities = 271/318 (85%), Gaps = 5/318 (1%) Strand = Plus / Minus Query: 249 ctgacgatgccgaagcggcgggagcggcgcgacatcgtgcggctggcgtacgcgctgcag 308 ||||||| |||||||||| ||||| ||| |||||||||| |||||||||||||||||| Sbjct: 1111 ctgacgacgccgaagcggtacgagcgtcgcaacatcgtgcgcctggcgtacgcgctgcag 1052 Query: 309 ccgccg----ccggcggcgggcgcgcgggtggacgtgcgcttcgtgttctgcaacgtgac 364 ||| || || ||||| ||||| ||||||||| ||||||||||||||| |||| | Sbjct: 1051 ccggcggtgccccccggcgt-cgcgcaggtggacgtccgcttcgtgttctgccgcgtggc 993 Query: 365 ggacccggtggaggcggcgctggtggcgctggagatcatgcggcacggcgacatcatcgt 424 ||||||||||| ||| |||||||| ||||||| | |||||||||||||||| | || Sbjct: 992 cgacccggtggacgcgcagctggtggtgctggaggccgcgcggcacggcgacatcctggt 933 Query: 425 gctcgactgcgccgagaacatgaacgacggcnagacgtacgcctacttctcgtccgtgcc 484 |||| ||||| | |||||||||||||||||| ||||| ||| ||| |||| |||||||| Sbjct: 932 gctcaactgcacggagaacatgaacgacggcaagacgcacgagtacctctcctccgtgcc 873 Query: 485 gcggctgttcgcggcggcgccctacgactacgtgatgaagaccgacgacgacacgtacct 544 |||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 872 gcggatgttcgcgtcgtcgccctacgactacgtgatgaagaccgacgacgacacgtacct 813 Query: 545 gcgggtggcggcgctggt 562 || ||||| |||||||| Sbjct: 812 ccgcgtggccgcgctggt 795 Score = 172 bits (87), Expect = 8e-40 Identities = 243/296 (82%), Gaps = 12/296 (4%) Strand = Plus / Minus Query: 270 gagcggcgcgacatcgtgcggctggcgtacgcgctgcagccgccgccggcggcgggcgcg 329 |||||||||| |||| |||| |||||||||||||||||||| |||||| |||| Sbjct: 19358 gagcggcgcggcatcctgcgcctggcgtacgcgctgcagcccgcgccgggggcg------ 19305 Query: 330 cgggtggacgtgcgcttcgtgttctgcaacgtgacggacccggtggaggcggcgctggtg 389 | |||||||||||| |||||| | ||| ||||||||||| | | ||| |||| ||||||| Sbjct: 19304 caggtggacgtgcggttcgtgctgtgcgacgtgacggacgccgcggacgcggtgctggtg 19245 Query: 390 gcgctggagatcatgcggcacggcgacatcatcgtgctcgactgcg------ccgagaac 443 ||| |||| |||||||||||||||| | ||||||||| || |||||||| Sbjct: 19244 gcggcggaggcggcgcggcacggcgacatcctggtgctcgacggctgcagtaccgagaac 19185 Query: 444 atgaacgacggcnagacgtacgcctacttctcgtccgtgccgcggctgttcgcggcggcg 503 |||||||||||| ||||| |||| ||| |||| ||||||||||| ||||||||| || Sbjct: 19184 atgaacgacggcaagacgcacgcgtacctctcctccgtgccgcgcctgttcgcgccgtgc 19125 Query: 504 ccctacgactacgtgatgaagaccgacgacgacacgtacctgcgggtggcggcgct 559 |||||||||||||| |||||| ||||||||||||||||||| || ||||||||||| Sbjct: 19124 ccctacgactacgtcatgaaggccgacgacgacacgtacctccgcgtggcggcgct 19069 Score = 58.0 bits (29), Expect = 3e-05 Identities = 98/120 (81%), Gaps = 6/120 (5%) Strand = Plus / Minus Query: 425 gctcgactgcgccgagaacatgaacgacggcnagacgtacgcctacttctcgtccgtgcc 484 |||||||||| | ||||||||| || ||||| |||| ||||||||||||| |||||| Sbjct: 23108 gctcgactgcccggagaacatggacaacggcaagacccacgcctacttctccagcgtgcc 23049 Query: 485 gcggctgttc-gcggcggcg-----ccctacgactacgtgatgaagaccgacgacgacac 538 ||| || ||| ||||||||| ||||||||| ||| |||||| ||||||||||||| Sbjct: 23048 gcgcctcttcggcggcggcgaagccgcctacgacttcgtcatgaaggccgacgacgacac 22989
>dbj|AK069858.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035N15, full insert sequence Length = 1074 Score = 293 bits (148), Expect = 3e-76 Identities = 295/343 (86%), Gaps = 6/343 (1%) Strand = Plus / Plus Query: 220 agccggagctgagcctgctggtcggcatcctgacgatgccgaagcggcgggagcggcgcg 279 |||| |||||||||||||| |||||| |||||||||||||||||||| ||||| |||| Sbjct: 251 agcccgagctgagcctgctcgtcggcgtcctgacgatgccgaagcggtacgagcgccgcg 310 Query: 280 acatcgtgcggctggcgtacgcgctgcagccgccgccggcggcgggcgcgcgggtggacg 339 |||||||||||||||||||||||||||| |||| |||||||| | ||||||||||||| Sbjct: 311 acatcgtgcggctggcgtacgcgctgca---gccggcggcggcgcgggcgcgggtggacg 367 Query: 340 tgcgcttcgtgttctgcaacgtgacggacccggtggaggcggcgctggtggcgctggaga 399 | ||||||||||||||| |||| | ||||||||||| ||| |||||||||||||||| Sbjct: 368 tccgcttcgtgttctgccgcgtggccgacccggtggacgcgcagctggtggcgctggagg 427 Query: 400 tcatgcggcacggcgacatcatcgtgct---cgactgcgccgagaacatgaacgacggcn 456 | ||| ||||||||| || | ||||| || ||||| |||||||||||| ||||| Sbjct: 428 ccgcgcgccacggcgacgtcgtggtgctcggcggctgcgaggagaacatgaaccacggca 487 Query: 457 agacgtacgcctacttctcgtccgtgccgcggctgttcgcggcggcgccctacgactacg 516 ||||| |||| ||| |||| ||||||||||| ||||||||| || | ||||||||||||| Sbjct: 488 agacgcacgcgtacctctcctccgtgccgcgcctgttcgcgtcgtccccctacgactacg 547 Query: 517 tgatgaagaccgacgacgacacgtacctgcgggtggcggcgct 559 | |||||||||||||||||||||||||| || ||||||||||| Sbjct: 548 tcatgaagaccgacgacgacacgtacctccgcgtggcggcgct 590
>dbj|AK106115.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-E03, full insert sequence Length = 1198 Score = 250 bits (126), Expect = 4e-63 Identities = 271/318 (85%), Gaps = 5/318 (1%) Strand = Plus / Plus Query: 249 ctgacgatgccgaagcggcgggagcggcgcgacatcgtgcggctggcgtacgcgctgcag 308 ||||||| |||||||||| ||||| ||| |||||||||| |||||||||||||||||| Sbjct: 352 ctgacgacgccgaagcggtacgagcgtcgcaacatcgtgcgcctggcgtacgcgctgcag 411 Query: 309 ccgccg----ccggcggcgggcgcgcgggtggacgtgcgcttcgtgttctgcaacgtgac 364 ||| || || ||||| ||||| ||||||||| ||||||||||||||| |||| | Sbjct: 412 ccggcggtgccccccggcgt-cgcgcaggtggacgtccgcttcgtgttctgccgcgtggc 470 Query: 365 ggacccggtggaggcggcgctggtggcgctggagatcatgcggcacggcgacatcatcgt 424 ||||||||||| ||| |||||||| ||||||| | |||||||||||||||| | || Sbjct: 471 cgacccggtggacgcgcagctggtggtgctggaggccgcgcggcacggcgacatcctggt 530 Query: 425 gctcgactgcgccgagaacatgaacgacggcnagacgtacgcctacttctcgtccgtgcc 484 |||| ||||| | |||||||||||||||||| ||||| ||| ||| |||| |||||||| Sbjct: 531 gctcaactgcacggagaacatgaacgacggcaagacgcacgagtacctctcctccgtgcc 590 Query: 485 gcggctgttcgcggcggcgccctacgactacgtgatgaagaccgacgacgacacgtacct 544 |||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 591 gcggatgttcgcgtcgtcgccctacgactacgtgatgaagaccgacgacgacacgtacct 650 Query: 545 gcgggtggcggcgctggt 562 || ||||| |||||||| Sbjct: 651 ccgcgtggccgcgctggt 668
>dbj|AK060938.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-C03, full insert sequence Length = 1155 Score = 250 bits (126), Expect = 4e-63 Identities = 271/318 (85%), Gaps = 5/318 (1%) Strand = Plus / Plus Query: 249 ctgacgatgccgaagcggcgggagcggcgcgacatcgtgcggctggcgtacgcgctgcag 308 ||||||| |||||||||| ||||| ||| |||||||||| |||||||||||||||||| Sbjct: 352 ctgacgacgccgaagcggtacgagcgtcgcaacatcgtgcgcctggcgtacgcgctgcag 411 Query: 309 ccgccg----ccggcggcgggcgcgcgggtggacgtgcgcttcgtgttctgcaacgtgac 364 ||| || || ||||| ||||| ||||||||| ||||||||||||||| |||| | Sbjct: 412 ccggcggtgccccccggcgt-cgcgcaggtggacgtccgcttcgtgttctgccgcgtggc 470 Query: 365 ggacccggtggaggcggcgctggtggcgctggagatcatgcggcacggcgacatcatcgt 424 ||||||||||| ||| |||||||| ||||||| | |||||||||||||||| | || Sbjct: 471 cgacccggtggacgcgcagctggtggtgctggaggccgcgcggcacggcgacatcctggt 530 Query: 425 gctcgactgcgccgagaacatgaacgacggcnagacgtacgcctacttctcgtccgtgcc 484 |||| ||||| | |||||||||||||||||| ||||| ||| ||| |||| |||||||| Sbjct: 531 gctcaactgcacggagaacatgaacgacggcaagacgcacgagtacctctcctccgtgcc 590 Query: 485 gcggctgttcgcggcggcgccctacgactacgtgatgaagaccgacgacgacacgtacct 544 |||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 591 gcggatgttcgcgtcgtcgccctacgactacgtgatgaagaccgacgacgacacgtacct 650 Query: 545 gcgggtggcggcgctggt 562 || ||||| |||||||| Sbjct: 651 ccgcgtggccgcgctggt 668
>gb|AY104839.1| Zea mays PCO137857 mRNA sequence Length = 1127 Score = 167 bits (84), Expect = 5e-38 Identities = 182/212 (85%), Gaps = 6/212 (2%) Strand = Plus / Plus Query: 293 ggcgtacgcgctgcagccgccgccggcggcgggcgcgcgggtggacgtgcgcttcgtgtt 352 ||||||||||||||||||| |||| ||| ||||||||| |||||||||||||||||||| Sbjct: 13 ggcgtacgcgctgcagccg--gccg-cggagggcgcgcgcgtggacgtgcgcttcgtgtt 69 Query: 353 ctgcaacgtgacggacccggtggaggcggcgctggtggcgctggagatcatgcggcacgg 412 |||| |||||||||||| ||||| ||||||||| ||||| ||||| | ||||||||| Sbjct: 70 ctgccgcgtgacggaccccgtggacgcggcgctgctggcggtggaggcgaggcggcacgg 129 Query: 413 cgacatcatcgtgct---cgactgcgccgagaacatgaacgacggcnagacgtacgccta 469 ||| || | ||||| || ||||||||||||||||||||||||| |||||||||| || Sbjct: 130 ggacgtcctggtgctggacggctgcgccgagaacatgaacgacggcaagacgtacgcgta 189 Query: 470 cttctcgtccgtgccgcggctgttcgcggcgg 501 | | ||||| |||||||| || |||||||||| Sbjct: 190 cctgtcgtcggtgccgcgcctcttcgcggcgg 221
>ref|XM_468154.1| Oryza sativa (japonica cultivar-group), mRNA Length = 924 Score = 131 bits (66), Expect = 3e-27 Identities = 137/161 (85%) Strand = Plus / Plus Query: 378 gcggcgctggtggcgctggagatcatgcggcacggcgacatcatcgtgctcgactgcgcc 437 ||||||||||||| |||||||||| | |||||||||||||||||||||||||| | Sbjct: 319 gcggcgctggtggggctggagatcgccgcgtacggcgacatcatcgtgctcgactgcacg 378 Query: 438 gagaacatgaacgacggcnagacgtacgcctacttctcgtccgtgccgcggctgttcgcg 497 ||||||||| || ||||| |||||||| ||||||||||| |||| |||||||||||||| Sbjct: 379 gagaacatggacaacggcaagacgtacacctacttctcggccgtcccgcggctgttcgcc 438 Query: 498 gcggcgccctacgactacgtgatgaagaccgacgacgacac 538 | | ||||||||||||||| ||||| ||||||||||| Sbjct: 439 ggcgagccctacgactacgtcggcaagacggacgacgacac 479
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 131 bits (66), Expect = 3e-27 Identities = 137/161 (85%) Strand = Plus / Minus Query: 378 gcggcgctggtggcgctggagatcatgcggcacggcgacatcatcgtgctcgactgcgcc 437 ||||||||||||| |||||||||| | |||||||||||||||||||||||||| | Sbjct: 33365432 gcggcgctggtggggctggagatcgccgcgtacggcgacatcatcgtgctcgactgcacg 33365373 Query: 438 gagaacatgaacgacggcnagacgtacgcctacttctcgtccgtgccgcggctgttcgcg 497 ||||||||| || ||||| |||||||| ||||||||||| |||| |||||||||||||| Sbjct: 33365372 gagaacatggacaacggcaagacgtacacctacttctcggccgtcccgcggctgttcgcc 33365313 Query: 498 gcggcgccctacgactacgtgatgaagaccgacgacgacac 538 | | ||||||||||||||| ||||| ||||||||||| Sbjct: 33365312 ggcgagccctacgactacgtcggcaagacggacgacgacac 33365272 Score = 113 bits (57), Expect = 6e-22 Identities = 98/112 (87%) Strand = Plus / Minus Query: 383 gctggtggcgctggagatcatgcggcacggcgacatcatcgtgctcgactgcgccgagaa 442 |||||||||| |||||||||| |||||||||||| |||||||| ||||| ||||||| Sbjct: 33373293 gctggtggcgatggagatcatcacccacggcgacatcctcgtgctcaactgcaccgagaa 33373234 Query: 443 catgaacgacggcnagacgtacgcctacttctcgtccgtgccgcggctgttc 494 ||||||||||||| ||||||||| |||||||||| || | ||||| |||||| Sbjct: 33373233 catgaacgacggcaagacgtacgactacttctcggccctcccgcgcctgttc 33373182 Score = 81.8 bits (41), Expect = 2e-12 Identities = 130/160 (81%) Strand = Plus / Minus Query: 383 gctggtggcgctggagatcatgcggcacggcgacatcatcgtgctcgactgcgccgagaa 442 ||||||| |||| |||||||| ||||||||| || | |||||| ||||| | ||||| Sbjct: 33349602 gctggtgtcgctcgagatcatcgcccacggcgacgtcgtggtgctcaactgcacggagaa 33349543 Query: 443 catgaacgacggcnagacgtacgcctacttctcgtccgtgccgcggctgttcgcggcggc 502 |||| |||||||| ||||| || |||||||||||||| | ||| ||||||||| | || Sbjct: 33349542 catggacgacggcaagacgcactcctacttctcgtccctcccggcgctgttcgccgacgc 33349483 Query: 503 gccctacgactacgtgatgaagaccgacgacgacacgtac 542 ||| ||||||||||| |||| |||||||||| ||||| Sbjct: 33349482 gccgtacgactacgtcggcaagatcgacgacgactcgtac 33349443 Score = 81.8 bits (41), Expect = 2e-12 Identities = 123/150 (82%), Gaps = 3/150 (2%) Strand = Plus / Minus Query: 391 cgctggagatcatgcggcacggcgacatcatcgtgctcgac---tgcgccgagaacatga 447 |||| |||||| | || ||||||||||||||||| |||||| |||| |||||| | | Sbjct: 33343819 cgctcgagatcctccgccacggcgacatcatcgtcctcgacgagtgcgaggagaacctca 33343760 Query: 448 acgacggcnagacgtacgcctacttctcgtccgtgccgcggctgttcgcggcggcgccct 507 ||| |||| |||||||||||| |||||| | | | ||||||||| ||| | | |||| Sbjct: 33343759 acggcggcaagacgtacgccttcttctccgcggcggcgcggctgtacgccgacgacccct 33343700 Query: 508 acgactacgtgatgaagaccgacgacgaca 537 ||||||||||||||||| |||||||||||| Sbjct: 33343699 acgactacgtgatgaaggccgacgacgaca 33343670 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 333 gtggacgtgcgcttcgtgttctgcaacgtgacgga 367 |||||||| ||||||||||||||| ||||||||| Sbjct: 2524954 gtggacgtccgcttcgtgttctgctccgtgacgga 2524988 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 292 tggcgtacgcgctgcagccgccgccg 317 ||||||||||||| |||||||||||| Sbjct: 33373381 tggcgtacgcgctccagccgccgccg 33373356 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 313 cgccggcggcgggcgcgcgggtgga 337 ||||||||| ||||||||||||||| Sbjct: 9901837 cgccggcggtgggcgcgcgggtgga 9901861
>dbj|AP004095.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1715_H01 Length = 138733 Score = 131 bits (66), Expect = 3e-27 Identities = 137/161 (85%) Strand = Plus / Minus Query: 378 gcggcgctggtggcgctggagatcatgcggcacggcgacatcatcgtgctcgactgcgcc 437 ||||||||||||| |||||||||| | |||||||||||||||||||||||||| | Sbjct: 106182 gcggcgctggtggggctggagatcgccgcgtacggcgacatcatcgtgctcgactgcacg 106123 Query: 438 gagaacatgaacgacggcnagacgtacgcctacttctcgtccgtgccgcggctgttcgcg 497 ||||||||| || ||||| |||||||| ||||||||||| |||| |||||||||||||| Sbjct: 106122 gagaacatggacaacggcaagacgtacacctacttctcggccgtcccgcggctgttcgcc 106063 Query: 498 gcggcgccctacgactacgtgatgaagaccgacgacgacac 538 | | ||||||||||||||| ||||| ||||||||||| Sbjct: 106062 ggcgagccctacgactacgtcggcaagacggacgacgacac 106022 Score = 113 bits (57), Expect = 6e-22 Identities = 98/112 (87%) Strand = Plus / Minus Query: 383 gctggtggcgctggagatcatgcggcacggcgacatcatcgtgctcgactgcgccgagaa 442 |||||||||| |||||||||| |||||||||||| |||||||| ||||| ||||||| Sbjct: 114043 gctggtggcgatggagatcatcacccacggcgacatcctcgtgctcaactgcaccgagaa 113984 Query: 443 catgaacgacggcnagacgtacgcctacttctcgtccgtgccgcggctgttc 494 ||||||||||||| ||||||||| |||||||||| || | ||||| |||||| Sbjct: 113983 catgaacgacggcaagacgtacgactacttctcggccctcccgcgcctgttc 113932 Score = 81.8 bits (41), Expect = 2e-12 Identities = 130/160 (81%) Strand = Plus / Minus Query: 383 gctggtggcgctggagatcatgcggcacggcgacatcatcgtgctcgactgcgccgagaa 442 ||||||| |||| |||||||| ||||||||| || | |||||| ||||| | ||||| Sbjct: 90352 gctggtgtcgctcgagatcatcgcccacggcgacgtcgtggtgctcaactgcacggagaa 90293 Query: 443 catgaacgacggcnagacgtacgcctacttctcgtccgtgccgcggctgttcgcggcggc 502 |||| |||||||| ||||| || |||||||||||||| | ||| ||||||||| | || Sbjct: 90292 catggacgacggcaagacgcactcctacttctcgtccctcccggcgctgttcgccgacgc 90233 Query: 503 gccctacgactacgtgatgaagaccgacgacgacacgtac 542 ||| ||||||||||| |||| |||||||||| ||||| Sbjct: 90232 gccgtacgactacgtcggcaagatcgacgacgactcgtac 90193 Score = 81.8 bits (41), Expect = 2e-12 Identities = 123/150 (82%), Gaps = 3/150 (2%) Strand = Plus / Minus Query: 391 cgctggagatcatgcggcacggcgacatcatcgtgctcgac---tgcgccgagaacatga 447 |||| |||||| | || ||||||||||||||||| |||||| |||| |||||| | | Sbjct: 84569 cgctcgagatcctccgccacggcgacatcatcgtcctcgacgagtgcgaggagaacctca 84510 Query: 448 acgacggcnagacgtacgcctacttctcgtccgtgccgcggctgttcgcggcggcgccct 507 ||| |||| |||||||||||| |||||| | | | ||||||||| ||| | | |||| Sbjct: 84509 acggcggcaagacgtacgccttcttctccgcggcggcgcggctgtacgccgacgacccct 84450 Query: 508 acgactacgtgatgaagaccgacgacgaca 537 ||||||||||||||||| |||||||||||| Sbjct: 84449 acgactacgtgatgaaggccgacgacgaca 84420 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 292 tggcgtacgcgctgcagccgccgccg 317 ||||||||||||| |||||||||||| Sbjct: 114131 tggcgtacgcgctccagccgccgccg 114106
>ref|XM_475865.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1074 Score = 121 bits (61), Expect = 3e-24 Identities = 120/140 (85%) Strand = Plus / Plus Query: 336 gacgtgcgcttcgtgttctgcaacgtgacggacccggtggaggcggcgctggtggcgctg 395 ||||| || ||||| ||||||||||||||| ||| || || |||| ||||||| ||||| Sbjct: 403 gacgtccggttcgtcttctgcaacgtgacgtcccccgtcgacgcggtgctggtgtcgctg 462 Query: 396 gagatcatgcggcacggcgacatcatcgtgctcgactgcgccgagaacatgaacgacggc 455 ||| ||| || ||||||||||||||||| ||||||||||||||||||||| || ||||| Sbjct: 463 gaggccatccgccacggcgacatcatcgtcctcgactgcgccgagaacatggacaacggc 522 Query: 456 nagacgtacgcctacttctc 475 |||||||| ||| |||||| Sbjct: 523 aagacgtacaccttcttctc 542 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 507 tacgactacgtgatgaagaccgacgacgacacgtacctgcgggtggcggcgctggtgg 564 |||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| Sbjct: 613 tacgactacgtgatgaaggccgacgacgacacgtacctccggctggcggcgctggtgg 670
>gb|AC129717.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0079H23, complete sequence Length = 191765 Score = 121 bits (61), Expect = 3e-24 Identities = 120/140 (85%) Strand = Plus / Minus Query: 336 gacgtgcgcttcgtgttctgcaacgtgacggacccggtggaggcggcgctggtggcgctg 395 ||||| || ||||| ||||||||||||||| ||| || || |||| ||||||| ||||| Sbjct: 112972 gacgtccggttcgtcttctgcaacgtgacgtcccccgtcgacgcggtgctggtgtcgctg 112913 Query: 396 gagatcatgcggcacggcgacatcatcgtgctcgactgcgccgagaacatgaacgacggc 455 ||| ||| || ||||||||||||||||| ||||||||||||||||||||| || ||||| Sbjct: 112912 gaggccatccgccacggcgacatcatcgtcctcgactgcgccgagaacatggacaacggc 112853 Query: 456 nagacgtacgcctacttctc 475 |||||||| ||| |||||| Sbjct: 112852 aagacgtacaccttcttctc 112833 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 507 tacgactacgtgatgaagaccgacgacgacacgtacctgcgggtggcggcgctggtgg 564 |||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| Sbjct: 112762 tacgactacgtgatgaaggccgacgacgacacgtacctccggctggcggcgctggtgg 112705
>gb|AC135925.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560C03, complete sequence Length = 177861 Score = 121 bits (61), Expect = 3e-24 Identities = 120/140 (85%) Strand = Plus / Minus Query: 336 gacgtgcgcttcgtgttctgcaacgtgacggacccggtggaggcggcgctggtggcgctg 395 ||||| || ||||| ||||||||||||||| ||| || || |||| ||||||| ||||| Sbjct: 169400 gacgtccggttcgtcttctgcaacgtgacgtcccccgtcgacgcggtgctggtgtcgctg 169341 Query: 396 gagatcatgcggcacggcgacatcatcgtgctcgactgcgccgagaacatgaacgacggc 455 ||| ||| || ||||||||||||||||| ||||||||||||||||||||| || ||||| Sbjct: 169340 gaggccatccgccacggcgacatcatcgtcctcgactgcgccgagaacatggacaacggc 169281 Query: 456 nagacgtacgcctacttctc 475 |||||||| ||| |||||| Sbjct: 169280 aagacgtacaccttcttctc 169261 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 507 tacgactacgtgatgaagaccgacgacgacacgtacctgcgggtggcggcgctggtgg 564 |||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| Sbjct: 169190 tacgactacgtgatgaaggccgacgacgacacgtacctccggctggcggcgctggtgg 169133
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 121 bits (61), Expect = 3e-24 Identities = 120/140 (85%) Strand = Plus / Minus Query: 336 gacgtgcgcttcgtgttctgcaacgtgacggacccggtggaggcggcgctggtggcgctg 395 ||||| || ||||| ||||||||||||||| ||| || || |||| ||||||| ||||| Sbjct: 27238004 gacgtccggttcgtcttctgcaacgtgacgtcccccgtcgacgcggtgctggtgtcgctg 27237945 Query: 396 gagatcatgcggcacggcgacatcatcgtgctcgactgcgccgagaacatgaacgacggc 455 ||| ||| || ||||||||||||||||| ||||||||||||||||||||| || ||||| Sbjct: 27237944 gaggccatccgccacggcgacatcatcgtcctcgactgcgccgagaacatggacaacggc 27237885 Query: 456 nagacgtacgcctacttctc 475 |||||||| ||| |||||| Sbjct: 27237884 aagacgtacaccttcttctc 27237865 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 507 tacgactacgtgatgaagaccgacgacgacacgtacctgcgggtggcggcgctggtgg 564 |||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| Sbjct: 27237794 tacgactacgtgatgaaggccgacgacgacacgtacctccggctggcggcgctggtgg 27237737 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 376 aggcggcgctggtggcgctgg 396 ||||||||||||||||||||| Sbjct: 19282233 aggcggcgctggtggcgctgg 19282253 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 cgccggcggcgggcgcgcgg 332 |||||||||||||||||||| Sbjct: 4096060 cgccggcggcgggcgcgcgg 4096041
>dbj|AK064636.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-A06, full insert sequence Length = 1222 Score = 121 bits (61), Expect = 3e-24 Identities = 120/140 (85%) Strand = Plus / Plus Query: 336 gacgtgcgcttcgtgttctgcaacgtgacggacccggtggaggcggcgctggtggcgctg 395 ||||| || ||||| ||||||||||||||| ||| || || |||| ||||||| ||||| Sbjct: 420 gacgtccggttcgtcttctgcaacgtgacgtcccccgtcgacgcggtgctggtgtcgctg 479 Query: 396 gagatcatgcggcacggcgacatcatcgtgctcgactgcgccgagaacatgaacgacggc 455 ||| ||| || ||||||||||||||||| ||||||||||||||||||||| || ||||| Sbjct: 480 gaggccatccgccacggcgacatcatcgtcctcgactgcgccgagaacatggacaacggc 539 Query: 456 nagacgtacgcctacttctc 475 |||||||| ||| |||||| Sbjct: 540 aagacgtacaccttcttctc 559 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 507 tacgactacgtgatgaagaccgacgacgacacgtacctgcgggtggcggcgctggtgg 564 |||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| Sbjct: 630 tacgactacgtgatgaaggccgacgacgacacgtacctccggctggcggcgctggtgg 687
>ref|XM_468155.1| Oryza sativa (japonica cultivar-group), mRNA Length = 942 Score = 113 bits (57), Expect = 6e-22 Identities = 98/112 (87%) Strand = Plus / Plus Query: 383 gctggtggcgctggagatcatgcggcacggcgacatcatcgtgctcgactgcgccgagaa 442 |||||||||| |||||||||| |||||||||||| |||||||| ||||| ||||||| Sbjct: 318 gctggtggcgatggagatcatcacccacggcgacatcctcgtgctcaactgcaccgagaa 377 Query: 443 catgaacgacggcnagacgtacgcctacttctcgtccgtgccgcggctgttc 494 ||||||||||||| ||||||||| |||||||||| || | ||||| |||||| Sbjct: 378 catgaacgacggcaagacgtacgactacttctcggccctcccgcgcctgttc 429 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 292 tggcgtacgcgctgcagccgccgccg 317 ||||||||||||| |||||||||||| Sbjct: 230 tggcgtacgcgctccagccgccgccg 255
>dbj|AP004057.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1316_E06 Length = 110197 Score = 113 bits (57), Expect = 6e-22 Identities = 98/112 (87%) Strand = Plus / Minus Query: 383 gctggtggcgctggagatcatgcggcacggcgacatcatcgtgctcgactgcgccgagaa 442 |||||||||| |||||||||| |||||||||||| |||||||| ||||| ||||||| Sbjct: 3912 gctggtggcgatggagatcatcacccacggcgacatcctcgtgctcaactgcaccgagaa 3853 Query: 443 catgaacgacggcnagacgtacgcctacttctcgtccgtgccgcggctgttc 494 ||||||||||||| ||||||||| |||||||||| || | ||||| |||||| Sbjct: 3852 catgaacgacggcaagacgtacgactacttctcggccctcccgcgcctgttc 3801 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 292 tggcgtacgcgctgcagccgccgccg 317 ||||||||||||| |||||||||||| Sbjct: 4000 tggcgtacgcgctccagccgccgccg 3975
>ref|XM_468151.1| Oryza sativa (japonica cultivar-group), mRNA Length = 924 Score = 81.8 bits (41), Expect = 2e-12 Identities = 130/160 (81%) Strand = Plus / Plus Query: 383 gctggtggcgctggagatcatgcggcacggcgacatcatcgtgctcgactgcgccgagaa 442 ||||||| |||| |||||||| ||||||||| || | |||||| ||||| | ||||| Sbjct: 324 gctggtgtcgctcgagatcatcgcccacggcgacgtcgtggtgctcaactgcacggagaa 383 Query: 443 catgaacgacggcnagacgtacgcctacttctcgtccgtgccgcggctgttcgcggcggc 502 |||| |||||||| ||||| || |||||||||||||| | ||| ||||||||| | || Sbjct: 384 catggacgacggcaagacgcactcctacttctcgtccctcccggcgctgttcgccgacgc 443 Query: 503 gccctacgactacgtgatgaagaccgacgacgacacgtac 542 ||| ||||||||||| |||| |||||||||| ||||| Sbjct: 444 gccgtacgactacgtcggcaagatcgacgacgactcgtac 483
>ref|XM_468149.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1295 Score = 81.8 bits (41), Expect = 2e-12 Identities = 123/150 (82%), Gaps = 3/150 (2%) Strand = Plus / Plus Query: 391 cgctggagatcatgcggcacggcgacatcatcgtgctcgac---tgcgccgagaacatga 447 |||| |||||| | || ||||||||||||||||| |||||| |||| |||||| | | Sbjct: 509 cgctcgagatcctccgccacggcgacatcatcgtcctcgacgagtgcgaggagaacctca 568 Query: 448 acgacggcnagacgtacgcctacttctcgtccgtgccgcggctgttcgcggcggcgccct 507 ||| |||| |||||||||||| |||||| | | | ||||||||| ||| | | |||| Sbjct: 569 acggcggcaagacgtacgccttcttctccgcggcggcgcggctgtacgccgacgacccct 628 Query: 508 acgactacgtgatgaagaccgacgacgaca 537 ||||||||||||||||| |||||||||||| Sbjct: 629 acgactacgtgatgaaggccgacgacgaca 658
>dbj|AK103670.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033135M23, full insert sequence Length = 1295 Score = 81.8 bits (41), Expect = 2e-12 Identities = 123/150 (82%), Gaps = 3/150 (2%) Strand = Plus / Plus Query: 391 cgctggagatcatgcggcacggcgacatcatcgtgctcgac---tgcgccgagaacatga 447 |||| |||||| | || ||||||||||||||||| |||||| |||| |||||| | | Sbjct: 509 cgctcgagatcctccgccacggcgacatcatcgtcctcgacgagtgcgaggagaacctca 568 Query: 448 acgacggcnagacgtacgcctacttctcgtccgtgccgcggctgttcgcggcggcgccct 507 ||| |||| |||||||||||| |||||| | | | ||||||||| ||| | | |||| Sbjct: 569 acggcggcaagacgtacgccttcttctccgcggcggcgcggctgtacgccgacgacccct 628 Query: 508 acgactacgtgatgaagaccgacgacgaca 537 ||||||||||||||||| |||||||||||| Sbjct: 629 acgactacgtgatgaaggccgacgacgaca 658
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 507 tacgactacgtgatgaagaccgacgacgacacgtacct 544 |||||||||||||||||| ||||||||||||||||| Sbjct: 4665835 tacgactacgtgatgaaggtggacgacgacacgtacct 4665798
>dbj|AP004738.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0090D06 Length = 174500 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 507 tacgactacgtgatgaagaccgacgacgacacgtacct 544 |||||||||||||||||| ||||||||||||||||| Sbjct: 153199 tacgactacgtgatgaaggtggacgacgacacgtacct 153162
>dbj|AP003514.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0698A06 Length = 156514 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 507 tacgactacgtgatgaagaccgacgacgacacgtacct 544 |||||||||||||||||| ||||||||||||||||| Sbjct: 28434 tacgactacgtgatgaaggtggacgacgacacgtacct 28397
>dbj|AK108798.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-C05, full insert sequence Length = 1204 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 507 tacgactacgtgatgaagaccgacgacgacacgtacct 544 |||||||||||||||||| ||||||||||||||||| Sbjct: 635 tacgactacgtgatgaaggtggacgacgacacgtacct 672
>emb|AL607006.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079A21, complete sequence Length = 141787 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 326 cgcgcgggtggacgtgcgcttcgtgttctgc 356 ||||| ||||||||| ||||||||||||||| Sbjct: 125491 cgcgcaggtggacgtccgcttcgtgttctgc 125461
>emb|AL731613.5|OSJN00257 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065H10, complete sequence Length = 133967 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 326 cgcgcgggtggacgtgcgcttcgtgttctgc 356 ||||| ||||||||| ||||||||||||||| Sbjct: 42049 cgcgcaggtggacgtccgcttcgtgttctgc 42019
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 326 cgcgcgggtggacgtgcgcttcgtgttctgc 356 ||||| ||||||||| ||||||||||||||| Sbjct: 27390895 cgcgcaggtggacgtccgcttcgtgttctgc 27390865
>dbj|AP005649.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0064G16 Length = 166453 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 333 gtggacgtgcgcttcgtgttctgcaacgtgacgga 367 |||||||| ||||||||||||||| ||||||||| Sbjct: 140875 gtggacgtccgcttcgtgttctgctccgtgacgga 140909
>dbj|AP005288.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1008_C03 Length = 103297 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 333 gtggacgtgcgcttcgtgttctgcaacgtgacgga 367 |||||||| ||||||||||||||| ||||||||| Sbjct: 3737 gtggacgtccgcttcgtgttctgctccgtgacgga 3771
>dbj|AK107644.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-131-F05, full insert sequence Length = 1492 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 251 gacgatgccgaagcggcgggagcggcg 277 ||||||| ||||||||||||||||||| Sbjct: 156 gacgatgacgaagcggcgggagcggcg 130
>ref|NM_196490.1| Oryza sativa (japonica cultivar-group) contains similarity to glutathione reductase (NADPH) (OSJNBa0032I20.3), mRNA Length = 1665 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 190 cggcgcgggccgaggcggagga 211 |||||||||||||||||||||| Sbjct: 188 cggcgcgggccgaggcggagga 167
>emb|Z67970.1|AAVMCPHEX Fowl adenovirus 1 FAV1 (CELO) genes for major core, hexon-associated and hexon proteins Length = 4703 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 151 gcacccggcgcgccggcgccgg 172 |||||||||||||||||||||| Sbjct: 1067 gcacccggcgcgccggcgccgg 1088
>gb|AF448416.1| Zea mays B73 chromosome 9S bz genomic region Length = 106186 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Minus Query: 507 tacgactacgtgatgaagaccgacgacgacacgt 540 |||||||||||||||||| ||||||||||||| Sbjct: 71752 tacgactacgtgatgaaggtggacgacgacacgt 71719
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 190 cggcgcgggccgaggcggagga 211 |||||||||||||||||||||| Sbjct: 13995547 cggcgcgggccgaggcggagga 13995568 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 373 tggaggcggcgctggtggcgctgg 396 ||||||||||||||| |||||||| Sbjct: 19050072 tggaggcggcgctggcggcgctgg 19050049
>gb|AE004536.1| Pseudomonas aeruginosa PAO1, section 97 of 529 of the complete genome Length = 11767 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 366 gacccggtggaggcggcgctgg 387 |||||||||||||||||||||| Sbjct: 9117 gacccggtggaggcggcgctgg 9138
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 364 cggacccggtggaggcggcgctggtg 389 ||||||||| |||||||||||||||| Sbjct: 949400 cggacccggaggaggcggcgctggtg 949425 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 cggcgcgggccgaggcggagg 210 ||||||||||||||||||||| Sbjct: 4649731 cggcgcgggccgaggcggagg 4649751 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 ggcgcgggccgaggcggagg 210 |||||||||||||||||||| Sbjct: 4844633 ggcgcgggccgaggcggagg 4844614
>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence Length = 144651 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 190 cggcgcgggccgaggcggagga 211 |||||||||||||||||||||| Sbjct: 11676 cggcgcgggccgaggcggagga 11697
>gb|AY664416.1| Zea mays cultivar Mo17 locus bz, complete sequence Length = 203581 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Minus Query: 507 tacgactacgtgatgaagaccgacgacgacacgt 540 |||||||||||||||||| ||||||||||||| Sbjct: 55782 tacgactacgtgatgaaggtggacgacgacacgt 55749
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 190 cggcgcgggccgaggcggagga 211 |||||||||||||||||||||| Sbjct: 14003789 cggcgcgggccgaggcggagga 14003810 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 373 tggaggcggcgctggtggcgctgg 396 ||||||||||||||| |||||||| Sbjct: 19061326 tggaggcggcgctggcggcgctgg 19061303
>gb|L37766.1|PSEAD Pseudomonas aeruginosa gene sequence Length = 405 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 366 gacccggtggaggcggcgctgg 387 |||||||||||||||||||||| Sbjct: 120 gacccggtggaggcggcgctgg 141
>gb|AC166333.9| Mus musculus chromosome 1, clone RP23-395A13, complete sequence Length = 188044 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 13 caaatcaaccggccatgaccatgat 37 |||||||||||||||| |||||||| Sbjct: 84967 caaatcaaccggccattaccatgat 84991
>ref|XM_469081.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2836 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 371 ggtggaggcggcgctggtggcgctg 395 ||||||||||||||||| ||||||| Sbjct: 2214 ggtggaggcggcgctggcggcgctg 2238
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 305 gcagccgccgccggcggcgggcgcg 329 |||||||||| |||||||||||||| Sbjct: 3443890 gcagccgccggcggcggcgggcgcg 3443914
>gb|BT017943.1| Zea mays clone EL01N0521C09.c mRNA sequence Length = 1203 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 538 cgtacctgcgggtggcggcgc 558 ||||||||||||||||||||| Sbjct: 409 cgtacctgcgggtggcggcgc 389
>gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0605G01, complete sequence Length = 146303 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 376 aggcggcgctggtggcgctgg 396 ||||||||||||||||||||| Sbjct: 86308 aggcggcgctggtggcgctgg 86328
>ref|XM_870775.1| PREDICTED: Bos taurus similar to torsin family 2, member A (LOC618444), mRNA Length = 1547 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 191 ggcgcgggccgaggcggagga 211 ||||||||||||||||||||| Sbjct: 923 ggcgcgggccgaggcggagga 943
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 371 ggtggaggcggcgctggtggcgctg 395 ||||||||||||||||| ||||||| Sbjct: 25353270 ggtggaggcggcgctggcggcgctg 25353246 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 303 ctgcagccgccgccggcggcg 323 ||||||||||||||||||||| Sbjct: 7632416 ctgcagccgccgccggcggcg 7632396 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gcagccgccgccggcggcgg 324 |||||||||||||||||||| Sbjct: 33060117 gcagccgccgccggcggcgg 33060136 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 ggcgcgcgggtggacgtgcg 343 |||||||||||||||||||| Sbjct: 27500179 ggcgcgcgggtggacgtgcg 27500198 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 ggcgcgcgggtggacgtgcg 343 |||||||||||||||||||| Sbjct: 27497198 ggcgcgcgggtggacgtgcg 27497217 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 ggcgcgcgggtggacgtgcg 343 |||||||||||||||||||| Sbjct: 27492859 ggcgcgcgggtggacgtgcg 27492878 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 ggcgcgcgggtggacgtgcg 343 |||||||||||||||||||| Sbjct: 27488255 ggcgcgcgggtggacgtgcg 27488274 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 301 cgctgcagccgccgccggcggcgg 324 ||||||||||||||||| |||||| Sbjct: 10890355 cgctgcagccgccgccgccggcgg 10890332
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 gcgggtggacgtgcgcttcgt 349 ||||||||||||||||||||| Sbjct: 4775823 gcgggtggacgtgcgcttcgt 4775803 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 acccggcgcgccggcgccgg 172 |||||||||||||||||||| Sbjct: 2965776 acccggcgcgccggcgccgg 2965795
>gb|AC133859.4| Oryza sativa chromosome 3 BAC OSJNBa0075A22 genomic sequence, complete sequence Length = 152828 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 371 ggtggaggcggcgctggtggcgctg 395 ||||||||||||||||| ||||||| Sbjct: 90090 ggtggaggcggcgctggcggcgctg 90114
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 542 cctgcgggtggcggcgctggt 562 ||||||||||||||||||||| Sbjct: 2064427 cctgcgggtggcggcgctggt 2064447
>emb|X56787.1|OSLMRNAC O.sativa L. mRNA for endochitinase Length = 1186 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 376 aggcggcgctggtggcgctgg 396 ||||||||||||||||||||| Sbjct: 47 aggcggcgctggtggcgctgg 67
>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29 Length = 303550 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 ggctccgatggcctcggtgtc 146 ||||||||||||||||||||| Sbjct: 57356 ggctccgatggcctcggtgtc 57376
>gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0096L14, from chromosome 3, complete sequence Length = 131142 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 303 ctgcagccgccgccggcggcg 323 ||||||||||||||||||||| Sbjct: 82874 ctgcagccgccgccggcggcg 82894
>gb|AC090436.37| Chlamydomonas reinhardtii clone cr-3h1, complete sequence Length = 102653 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 370 cggtggaggcggcgctggtggcgctggag 398 ||||||||||||||| ||||||| ||||| Sbjct: 59993 cggtggaggcggcgcaggtggcggtggag 59965
>gb|AC090435.28| Chlamydomonas reinhardtii clone cr-32m22, complete sequence Length = 79677 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 370 cggtggaggcggcgctggtggcgctggag 398 ||||||||||||||| ||||||| ||||| Sbjct: 69876 cggtggaggcggcgcaggtggcggtggag 69904
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 gcgggcgcgcgggtggacgtg 341 ||||||||||||||||||||| Sbjct: 2929166 gcgggcgcgcgggtggacgtg 2929146
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 371 ggtggaggcggcgctggtggcgctg 395 ||||||||||||||||| ||||||| Sbjct: 25444579 ggtggaggcggcgctggcggcgctg 25444555 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 303 ctgcagccgccgccggcggcg 323 ||||||||||||||||||||| Sbjct: 7630251 ctgcagccgccgccggcggcg 7630231 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gcagccgccgccggcggcgg 324 |||||||||||||||||||| Sbjct: 33150627 gcagccgccgccggcggcgg 33150646 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 ggcgcgcgggtggacgtgcg 343 |||||||||||||||||||| Sbjct: 27591502 ggcgcgcgggtggacgtgcg 27591521 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 ggcgcgcgggtggacgtgcg 343 |||||||||||||||||||| Sbjct: 27588521 ggcgcgcgggtggacgtgcg 27588540 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 ggcgcgcgggtggacgtgcg 343 |||||||||||||||||||| Sbjct: 27584182 ggcgcgcgggtggacgtgcg 27584201 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 ggcgcgcgggtggacgtgcg 343 |||||||||||||||||||| Sbjct: 27579578 ggcgcgcgggtggacgtgcg 27579597 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 301 cgctgcagccgccgccggcggcgg 324 ||||||||||||||||| |||||| Sbjct: 10888456 cgctgcagccgccgccgccggcgg 10888433
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 332 ggtggacgtgcgcttcgtgttctgc 356 ||||||||| ||||||||||||||| Sbjct: 41346361 ggtggacgtccgcttcgtgttctgc 41346337 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 agccgccgccggcggcgggcgcgcg 331 ||||||||||||||| ||||||||| Sbjct: 18147208 agccgccgccggcggtgggcgcgcg 18147184 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 306 cagccgccgccggcggcgggcgcg 329 |||||| ||||||||||||||||| Sbjct: 36084669 cagccgtcgccggcggcgggcgcg 36084646
>dbj|AP004031.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0432C03 Length = 164394 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 332 ggtggacgtgcgcttcgtgttctgc 356 ||||||||| ||||||||||||||| Sbjct: 37854 ggtggacgtccgcttcgtgttctgc 37830
>gb|AC012665.8| Homo sapiens BAC clone RP11-19E11 from 2, complete sequence Length = 126039 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 143 tgtcctctgcacccggcgcgc 163 ||||||||||||||||||||| Sbjct: 47382 tgtcctctgcacccggcgcgc 47402
>dbj|AP002970.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0504D03 Length = 139201 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 agccgccgccggcggcgggcgcgcg 331 ||||||||||||||| ||||||||| Sbjct: 123649 agccgccgccggcggtgggcgcgcg 123625
>dbj|AP005007.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0521F09 Length = 164823 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 313 cgccggcggcgggcgcgcgggtgga 337 ||||||||| ||||||||||||||| Sbjct: 82799 cgccggcggtgggcgcgcgggtgga 82823
>dbj|AK120547.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129M03, full insert sequence Length = 2975 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 371 ggtggaggcggcgctggtggcgctg 395 ||||||||||||||||| ||||||| Sbjct: 2376 ggtggaggcggcgctggcggcgctg 2400
>dbj|AK104758.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-G08, full insert sequence Length = 1107 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 313 cgccggcggcgggcgcgcgggtgga 337 ||||||||| ||||||||||||||| Sbjct: 109 cgccggcggtgggcgcgcgggtgga 133
>dbj|AK103077.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118E11, full insert sequence Length = 3779 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 agccgccgccggcggcgggcgcgcg 331 ||||||||||||||| ||||||||| Sbjct: 161 agccgccgccggcggtgggcgcgcg 137
>dbj|AK066133.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013053G17, full insert sequence Length = 757 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 371 ggtggaggcggcgctggtggcgctg 395 ||||||||||||||||| ||||||| Sbjct: 138 ggtggaggcggcgctggcggcgctg 162
>dbj|AK064930.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000O04, full insert sequence Length = 2412 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 313 cgccggcggcgggcgcgcgggtgga 337 ||||||||| ||||||||||||||| Sbjct: 110 cgccggcggtgggcgcgcgggtgga 134
>dbj|AK060159.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-G12, full insert sequence Length = 1107 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 313 cgccggcggcgggcgcgcgggtgga 337 ||||||||| ||||||||||||||| Sbjct: 109 cgccggcggtgggcgcgcgggtgga 133
>gb|AY104796.1| Zea mays PCO077238 mRNA sequence Length = 1355 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 538 cgtacctgcgggtggcggcgc 558 ||||||||||||||||||||| Sbjct: 569 cgtacctgcgggtggcggcgc 549
>dbj|D16222.1|RICCHT2 Oryza sativa (japonica cultivar-group) Cht-2 gene for endochitinase, complete cds Length = 2986 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 376 aggcggcgctggtggcgctgg 396 ||||||||||||||||||||| Sbjct: 1352 aggcggcgctggtggcgctgg 1372
>gb|L27473.1|CRECPN1C Chlamydomonas reinhardtii chaperonin beta-like subunit, partial cds Length = 1618 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 ccgccgccggcggcgggcgcg 329 ||||||||||||||||||||| Sbjct: 770 ccgccgccggcggcgggcgcg 750
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 cggcggcgggcgcgcgggtg 335 |||||||||||||||||||| Sbjct: 1575512 cggcggcgggcgcgcgggtg 1575531
>ref|XM_476049.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1281 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 cgccggcggcgggcgcgcgg 332 |||||||||||||||||||| Sbjct: 931 cgccggcggcgggcgcgcgg 912
>ref|XM_507337.1| PREDICTED Oryza sativa (japonica cultivar-group), P0562A06.31 mRNA Length = 1988 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 373 tggaggcggcgctggtggcgctgg 396 ||||||||||||||| |||||||| Sbjct: 792 tggaggcggcgctggaggcgctgg 815
>ref|XM_483774.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1422 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 373 tggaggcggcgctggtggcgctgg 396 ||||||||||||||| |||||||| Sbjct: 796 tggaggcggcgctggaggcgctgg 819
>ref|XM_480994.1| Oryza sativa (japonica cultivar-group), mRNA Length = 948 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 gccgccggcggcgggcgcgc 330 |||||||||||||||||||| Sbjct: 36 gccgccggcggcgggcgcgc 55
>ref|NM_185036.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2375 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gcagccgccgccggcggcgg 324 |||||||||||||||||||| Sbjct: 29 gcagccgccgccggcggcgg 48
>ref|NM_197291.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0091N21.40), mRNA Length = 426 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 373 tggaggcggcgctggtggcgctgg 396 ||||||||||||||| |||||||| Sbjct: 128 tggaggcggcgctggcggcgctgg 151
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 cgcgctgcagccgccgccgg 318 |||||||||||||||||||| Sbjct: 1053751 cgcgctgcagccgccgccgg 1053770
>ref|NM_190536.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 936 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 306 cagccgccgccggcggcgggcgcg 329 |||||| ||||||||||||||||| Sbjct: 152 cagccgtcgccggcggcgggcgcg 175
>ref|XM_469352.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1017 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 ggcgcgcgggtggacgtgcg 343 |||||||||||||||||||| Sbjct: 499 ggcgcgcgggtggacgtgcg 480
>ref|XM_469351.1| Oryza sativa (japonica cultivar-group), mRNA Length = 684 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 ggcgcgcgggtggacgtgcg 343 |||||||||||||||||||| Sbjct: 357 ggcgcgcgggtggacgtgcg 338
>ref|XM_469350.1| Oryza sativa (japonica cultivar-group), mRNA Length = 690 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 ggcgcgcgggtggacgtgcg 343 |||||||||||||||||||| Sbjct: 363 ggcgcgcgggtggacgtgcg 344
>ref|XM_469349.1| Oryza sativa (japonica cultivar-group), mRNA Length = 684 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 ggcgcgcgggtggacgtgcg 343 |||||||||||||||||||| Sbjct: 357 ggcgcgcgggtggacgtgcg 338
>ref|NM_002149.2| Homo sapiens hippocalcin-like 1 (HPCAL1), transcript variant 1, mRNA Length = 1769 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 cgctgcagccgccgccggcg 320 |||||||||||||||||||| Sbjct: 196 cgctgcagccgccgccggcg 215
>gb|BC017028.1| Homo sapiens hippocalcin-like 1, transcript variant 1, mRNA (cDNA clone MGC:9046 IMAGE:3902811), complete cds Length = 1730 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 cgctgcagccgccgccggcg 320 |||||||||||||||||||| Sbjct: 173 cgctgcagccgccgccggcg 192
>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete sequence Length = 1178688 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 cggccatgaccatgatgaag 41 |||||||||||||||||||| Sbjct: 460946 cggccatgaccatgatgaag 460965
>gb|AC135498.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0010M24, complete sequence Length = 164853 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 tgcagccgccgccggcggcg 323 |||||||||||||||||||| Sbjct: 2455 tgcagccgccgccggcggcg 2474
>gb|AC135499.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0031M14, complete sequence Length = 49269 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 tgcagccgccgccggcggcg 323 |||||||||||||||||||| Sbjct: 37061 tgcagccgccgccggcggcg 37080
>gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0080I08, complete sequence Length = 197156 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 301 cgctgcagccgccgccggcggcgg 324 |||||| ||||||||||||||||| Sbjct: 80742 cgctgccgccgccgccggcggcgg 80719
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 373 tggaggcggcgctggtggcgctgg 396 |||||| ||||||||||||||||| Sbjct: 1238928 tggagggggcgctggtggcgctgg 1238951
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 cgccgccggcggcgggcgcg 329 |||||||||||||||||||| Sbjct: 115973 cgccgccggcggcgggcgcg 115992
>ref|XM_714125.1| Candida albicans SC5314 hypothetical protein (CaO19_12983), mRNA Length = 1392 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 371 ggtggaggcggcgctggtggcgctggag 398 ||||| |||||||||||||||| ||||| Sbjct: 952 ggtggtggcggcgctggtggcggtggag 979
>ref|XM_714008.1| Candida albicans SC5314 hypothetical protein (CaO19_5537), mRNA Length = 1404 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 371 ggtggaggcggcgctggtggcgctggag 398 ||||| |||||||||||||||| ||||| Sbjct: 958 ggtggtggcggcgctggtggcggtggag 985
>gb|AE009352.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 122 of 187 of the complete sequence Length = 10693 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 ggcggcgctggtggcgctgg 396 |||||||||||||||||||| Sbjct: 4481 ggcggcgctggtggcgctgg 4500
>gb|AE008261.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 65 of 187 of the complete sequence Length = 10189 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 ggcggcgctggtggcgctgg 396 |||||||||||||||||||| Sbjct: 7491 ggcggcgctggtggcgctgg 7472
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 ccatgatgaaggcgcccacg 50 |||||||||||||||||||| Sbjct: 1061791 ccatgatgaaggcgcccacg 1061772
>gb|AC016814.14| Mus musculus chromosome 1, clone RP23-2M16, complete sequence Length = 247961 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ggagccggagctgagcctgc 237 |||||||||||||||||||| Sbjct: 216936 ggagccggagctgagcctgc 216917
>gb|BC017482.1| Homo sapiens hippocalcin-like 1, mRNA (cDNA clone MGC:15798 IMAGE:3504942), complete cds Length = 1792 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 cgctgcagccgccgccggcg 320 |||||||||||||||||||| Sbjct: 196 cgctgcagccgccgccggcg 215
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 gtacaccggcgtgtcggcgc 195 |||||||||||||||||||| Sbjct: 3651393 gtacaccggcgtgtcggcgc 3651374
>ref|XM_572796.1| Cryptococcus neoformans var. neoformans JEC21 pre-mRNA splicing factor (CNI01600) partial mRNA Length = 429 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 cggccatgaccatgatgaag 41 |||||||||||||||||||| Sbjct: 90 cggccatgaccatgatgaag 109
>emb|AL591792.1|SME591792 Sinorhizobium meliloti 1021 complete chromosome; segment 11/12 Length = 333800 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 gcgggccgaggcggaggatg 213 |||||||||||||||||||| Sbjct: 182132 gcgggccgaggcggaggatg 182113
>emb|AL591784.1|SME591784 Sinorhizobium meliloti 1021 complete chromosome; segment 3/12 Length = 300000 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 246 atcctgacgatgccgaagcggcgg 269 ||||||||||||||||||| |||| Sbjct: 229133 atcctgacgatgccgaagccgcgg 229156
>gb|AC009468.3| Homo sapiens BAC clone GS1-278J22 from 7, complete sequence Length = 152517 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 cctgctcctcgtcttcctgc 105 |||||||||||||||||||| Sbjct: 82852 cctgctcctcgtcttcctgc 82871
>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence Length = 1471779 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 ctgacgatgccgaagcggcg 268 |||||||||||||||||||| Sbjct: 207 ctgacgatgccgaagcggcg 226
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 300 gcgctgcagccgccgccggcggcg 323 |||||||||||||||||| ||||| Sbjct: 477504 gcgctgcagccgccgccgtcggcg 477481
>gb|AC134769.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1145F05, from chromosome 3, complete sequence Length = 127348 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 301 cgctgcagccgccgccggcggcgg 324 ||||||||||||||||| |||||| Sbjct: 90674 cgctgcagccgccgccgccggcgg 90697
>emb|X54107.1|SCPSCL S.clavuligerus linear plasmid pSCL (complete sequence) Length = 11696 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 gcgggtggcggcgctggtgg 564 |||||||||||||||||||| Sbjct: 8458 gcgggtggcggcgctggtgg 8477
>emb|AJ630128.1| Bacteriophage S-PM2 complete genome Length = 196280 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 374 ggaggcggcgctggtggcgctgga 397 |||||||||| ||||||||||||| Sbjct: 181618 ggaggcggcggtggtggcgctgga 181641
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 ctggtcggcatcctgacgat 256 |||||||||||||||||||| Sbjct: 2945750 ctggtcggcatcctgacgat 2945731
>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16 Length = 349876 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 cgccgccggcggcgggcgcg 329 |||||||||||||||||||| Sbjct: 212795 cgccgccggcggcgggcgcg 212776
>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14 Length = 348014 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 cgccgccggcggcgggcgcg 329 |||||||||||||||||||| Sbjct: 124821 cgccgccggcggcgggcgcg 124802
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 cgccgccggcggcgggcgcg 329 |||||||||||||||||||| Sbjct: 3961523 cgccgccggcggcgggcgcg 3961542
>gb|AC100834.3| Homo sapiens chromosome 15, clone CTD-2125J1, complete sequence Length = 152005 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 218 ggagccggagctgagcctgctggt 241 ||||||||||||||||||| |||| Sbjct: 38700 ggagccggagctgagcctggtggt 38677
>gb|AC084817.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0419C04, complete sequence Length = 136713 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 cgccggcggcgggcgcgcgg 332 |||||||||||||||||||| Sbjct: 70754 cgccggcggcgggcgcgcgg 70735
>gb|AC091122.10| Oryza sativa chromosome 10 BAC OSJNBb0091N21 genomic sequence, complete sequence Length = 151991 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 373 tggaggcggcgctggtggcgctgg 396 ||||||||||||||| |||||||| Sbjct: 28592 tggaggcggcgctggcggcgctgg 28615
>emb|CR623935.1| full-length cDNA clone CS0DB002YJ08 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1716 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 cgctgcagccgccgccggcg 320 |||||||||||||||||||| Sbjct: 203 cgctgcagccgccgccggcg 222
>emb|CR616250.1| full-length cDNA clone CS0DK012YB24 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1708 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 cgctgcagccgccgccggcg 320 |||||||||||||||||||| Sbjct: 194 cgctgcagccgccgccggcg 213
>emb|CR613842.1| full-length cDNA clone CS0DC006YI15 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1684 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 cgctgcagccgccgccggcg 320 |||||||||||||||||||| Sbjct: 174 cgctgcagccgccgccggcg 193
>emb|CR605568.1| full-length cDNA clone CS0DD007YE20 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 1702 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 cgctgcagccgccgccggcg 320 |||||||||||||||||||| Sbjct: 205 cgctgcagccgccgccggcg 224
>emb|CR599915.1| full-length cDNA clone CS0DK008YN03 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1681 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 cgctgcagccgccgccggcg 320 |||||||||||||||||||| Sbjct: 171 cgctgcagccgccgccggcg 190
>emb|CR599816.1| full-length cDNA clone CS0DH005YJ01 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 1830 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 cgctgcagccgccgccggcg 320 |||||||||||||||||||| Sbjct: 166 cgctgcagccgccgccggcg 185
>gb|AE011950.1| Xanthomonas axonopodis pv. citri str. 306, section 328 of 469 of the complete genome Length = 11944 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 gtacaccggcgtgtcggcgc 195 |||||||||||||||||||| Sbjct: 2262 gtacaccggcgtgtcggcgc 2243
>emb|CR594189.1| full-length cDNA clone CS0DB003YH09 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1688 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 cgctgcagccgccgccggcg 320 |||||||||||||||||||| Sbjct: 174 cgctgcagccgccgccggcg 193
>emb|CR593075.1| full-length cDNA clone CS0DK010YI01 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1726 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 cgctgcagccgccgccggcg 320 |||||||||||||||||||| Sbjct: 203 cgctgcagccgccgccggcg 222
>gb|AE012180.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 88 of 460 of the complete genome Length = 10929 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 386 ggtggcgctggagatcatgcggca 409 |||||||||||||||| ||||||| Sbjct: 303 ggtggcgctggagatcgtgcggca 326
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 gcctgctggtcggcatcctg 251 |||||||||||||||||||| Sbjct: 4810094 gcctgctggtcggcatcctg 4810075
>gb|AC087192.14| Oryza sativa chromosome 10 BAC OSJNBa0005K07 genomic sequence, complete sequence Length = 113606 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 373 tggaggcggcgctggtggcgctgg 396 ||||||||||||||| |||||||| Sbjct: 2621 tggaggcggcgctggcggcgctgg 2598
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 386 ggtggcgctggagatcatgcggca 409 |||||||||||||||| ||||||| Sbjct: 4080487 ggtggcgctggagatcgtgcggca 4080464
>gb|U77671.1|BBU77671 Bordetella bronchiseptica putative ferric siderophore receptor (bfrB) gene, complete cds Length = 2670 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 cgccgccggcggcgggcgcg 329 |||||||||||||||||||| Sbjct: 325 cgccgccggcggcgggcgcg 306
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 301 cgctgcagccgccgccggcggcgg 324 |||||| ||||||||||||||||| Sbjct: 18814852 cgctgccgccgccgccggcggcgg 18814829 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgcagccgccgccggcggcg 323 |||||||||||||||||||| Sbjct: 9281565 tgcagccgccgccggcggcg 9281546
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 373 tggaggcggcgctggtggcgctgg 396 ||||||||||||||| |||||||| Sbjct: 28036762 tggaggcggcgctggaggcgctgg 28036785 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 gccgccggcggcgggcgcgc 330 |||||||||||||||||||| Sbjct: 9117252 gccgccggcggcgggcgcgc 9117271
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 ggcggcgctggtggcgctgg 396 |||||||||||||||||||| Sbjct: 3202243 ggcggcgctggtggcgctgg 3202224
>gb|AC120396.6| Mus musculus chromosome 1, clone RP24-331B5, complete sequence Length = 194086 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 ggagccggagctgagcctgc 237 |||||||||||||||||||| Sbjct: 115724 ggagccggagctgagcctgc 115743
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 gccgcggctgttcgcggcgg 501 |||||||||||||||||||| Sbjct: 6831916 gccgcggctgttcgcggcgg 6831897
>gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genomic sequence, complete sequence Length = 123406 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 ggcgcgcgggtggacgtgcg 343 |||||||||||||||||||| Sbjct: 62259 ggcgcgcgggtggacgtgcg 62240 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 ggcgcgcgggtggacgtgcg 343 |||||||||||||||||||| Sbjct: 57655 ggcgcgcgggtggacgtgcg 57636 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 ggcgcgcgggtggacgtgcg 343 |||||||||||||||||||| Sbjct: 53316 ggcgcgcgggtggacgtgcg 53297 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 ggcgcgcgggtggacgtgcg 343 |||||||||||||||||||| Sbjct: 50335 ggcgcgcgggtggacgtgcg 50316
>gb|AC126327.6| Homo sapiens chromosome 17, clone RP11-428O23, complete sequence Length = 181517 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 ctcgtcttcctgctctcatc 112 |||||||||||||||||||| Sbjct: 25198 ctcgtcttcctgctctcatc 25179
>gb|AC104321.7| Oryza sativa chromosome 3 BAC OSJNBa0052F07 genomic sequence, complete sequence Length = 139823 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 gcagccgccgccggcggcgg 324 |||||||||||||||||||| Sbjct: 63191 gcagccgccgccggcggcgg 63172
>gb|AC007240.2| Homo sapiens BAC clone RP11-83M8 from 2, complete sequence Length = 203250 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 cgctgcagccgccgccggcg 320 |||||||||||||||||||| Sbjct: 170741 cgctgcagccgccgccggcg 170760
>gb|AF210249.1|AF210249 Streptomyces verticillus bleomycin biosynthetic gene cluster, complete cds Length = 77457 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 gcgggtggcggcgctggtgg 564 |||||||||||||||||||| Sbjct: 70683 gcgggtggcggcgctggtgg 70664
>dbj|AP003241.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0408C03 Length = 141273 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 306 cagccgccgccggcggcgggcgcg 329 |||||| ||||||||||||||||| Sbjct: 97394 cagccgtcgccggcggcgggcgcg 97371
>dbj|AP005524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0562A06 Length = 154198 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 373 tggaggcggcgctggtggcgctgg 396 ||||||||||||||| |||||||| Sbjct: 114254 tggaggcggcgctggaggcgctgg 114277
>dbj|AP005495.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0003H03 Length = 157905 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 gccgccggcggcgggcgcgc 330 |||||||||||||||||||| Sbjct: 127562 gccgccggcggcgggcgcgc 127581
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 gaggcggcgctggtggcgct 394 |||||||||||||||||||| Sbjct: 1800030 gaggcggcgctggtggcgct 1800049
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 gcgggagcggcgcgacatcg 285 |||||||||||||||||||| Sbjct: 938417 gcgggagcggcgcgacatcg 938398
>dbj|AP005686.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0016E03 Length = 152934 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 gcagccgccgccggcggcgg 324 |||||||||||||||||||| Sbjct: 121306 gcagccgccgccggcggcgg 121287
>dbj|AP005544.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0604E01 Length = 159049 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 373 tggaggcggcgctggtggcgctgg 396 ||||||||||||||| |||||||| Sbjct: 34257 tggaggcggcgctggaggcgctgg 34280
>dbj|AP005799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0012K14 Length = 155544 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 gccgccggcggcgggcgcgc 330 |||||||||||||||||||| Sbjct: 52746 gccgccggcggcgggcgcgc 52765
>ref|XM_321754.2| Anopheles gambiae str. PEST ENSANGP00000009724 (ENSANGG00000007285), partial mRNA Length = 987 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 ggcggcgctggtggcgctgg 396 |||||||||||||||||||| Sbjct: 61 ggcggcgctggtggcgctgg 80
>emb|AJ012458.1|VCA012458 Volvox carteri mRNA for alkaline phosphatase Length = 4098 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cggtggaggcggcgctggtg 389 |||||||||||||||||||| Sbjct: 803 cggtggaggcggcgctggtg 822
>dbj|AK107230.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-E03, full insert sequence Length = 1988 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 373 tggaggcggcgctggtggcgctgg 396 ||||||||||||||| |||||||| Sbjct: 792 tggaggcggcgctggaggcgctgg 815
>dbj|AK107117.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-A12, full insert sequence Length = 1422 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 373 tggaggcggcgctggtggcgctgg 396 ||||||||||||||| |||||||| Sbjct: 796 tggaggcggcgctggaggcgctgg 819
>dbj|AK103717.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138A01, full insert sequence Length = 966 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gcagccgccgccggcggcgg 324 |||||||||||||||||||| Sbjct: 237 gcagccgccgccggcggcgg 256
>dbj|AK103716.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033137P21, full insert sequence Length = 998 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 ggcgcgcgggtggacgtgcg 343 |||||||||||||||||||| Sbjct: 483 ggcgcgcgggtggacgtgcg 464
>dbj|AK102205.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087G11, full insert sequence Length = 3287 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 301 cgctgcagccgccgccggcggcgg 324 ||||||||||||||||| |||||| Sbjct: 238 cgctgcagccgccgccgccggcgg 215
>dbj|AK071481.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091A07, full insert sequence Length = 1142 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 cgccggcggcgggcgcgcgg 332 |||||||||||||||||||| Sbjct: 475 cgccggcggcgggcgcgcgg 456
>dbj|AK069995.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037B09, full insert sequence Length = 1917 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 301 cgctgcagccgccgccggcggcgg 324 |||||| ||||||||||||||||| Sbjct: 1498 cgctgccgccgccgccggcggcgg 1521
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 370 cggtggaggcggcgctggtggcgc 393 ||||||||||||||||| |||||| Sbjct: 741077 cggtggaggcggcgctgctggcgc 741100
>gb|BC009846.2| Homo sapiens hippocalcin-like 1, transcript variant 1, mRNA (cDNA clone MGC:15294 IMAGE:4100091), complete cds Length = 1747 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 cgctgcagccgccgccggcg 320 |||||||||||||||||||| Sbjct: 181 cgctgcagccgccgccggcg 200
>dbj|AK064713.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-D01, full insert sequence Length = 714 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gcagccgccgccggcggcgg 324 |||||||||||||||||||| Sbjct: 79 gcagccgccgccggcggcgg 98
>dbj|AK063699.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-G07, full insert sequence Length = 772 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 306 cagccgccgccggcggcgggcgcg 329 |||||| ||||||||||||||||| Sbjct: 413 cagccgtcgccggcggcgggcgcg 436
>dbj|AK063420.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-C03, full insert sequence Length = 1758 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gcagccgccgccggcggcgg 324 |||||||||||||||||||| Sbjct: 56 gcagccgccgccggcggcgg 75
>dbj|AK059872.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-F02, full insert sequence Length = 1028 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 ggcgcgcgggtggacgtgcg 343 |||||||||||||||||||| Sbjct: 510 ggcgcgcgggtggacgtgcg 491
>dbj|AP000872.5| Homo sapiens genomic DNA, chromosome 11q clone:RP11-727A20, complete sequences Length = 157330 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 ccacctcctacctcatcctg 71 |||||||||||||||||||| Sbjct: 139020 ccacctcctacctcatcctg 139001
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 cgccgccggcggcgggcgcg 329 |||||||||||||||||||| Sbjct: 3360698 cgccgccggcggcgggcgcg 3360679
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 cggcgcgccggcgccggaca 175 |||||||||||||||||||| Sbjct: 3147454 cggcgcgccggcgccggaca 3147473
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 gcctgctggtcggcatcctg 251 |||||||||||||||||||| Sbjct: 1973216 gcctgctggtcggcatcctg 1973235
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 301 cgctgcagccgccgccggcggcgg 324 |||||| ||||||||||||||||| Sbjct: 18975548 cgctgccgccgccgccggcggcgg 18975525 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tgcagccgccgccggcggcg 323 |||||||||||||||||||| Sbjct: 9353262 tgcagccgccgccggcggcg 9353243
>dbj|AP004903.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT01K08, TM0061, complete sequence Length = 94052 Score = 40.1 bits (20), Expect = 7.7 Identities = 47/56 (83%) Strand = Plus / Plus Query: 394 tggagatcatgcggcacggcgacatcatcgtgctcgactgcgccgagaacatgaac 449 |||||||||||| | || |||||||||| | ||| ||||| | |||||||||||| Sbjct: 43912 tggagatcatgcagtacaacgacatcatcatcctcaactgcacagagaacatgaac 43967
>emb|AL645600.11| Mouse DNA sequence from clone RP23-396N4 on chromosome 11, complete sequence Length = 180286 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 tccattccatcaaatcaacc 22 |||||||||||||||||||| Sbjct: 116091 tccattccatcaaatcaacc 116072 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,923,820 Number of Sequences: 3902068 Number of extensions: 3923820 Number of successful extensions: 118080 Number of sequences better than 10.0: 170 Number of HSP's better than 10.0 without gapping: 187 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 106826 Number of HSP's gapped (non-prelim): 11236 length of query: 564 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 541 effective length of database: 17,143,297,704 effective search space: 9274524057864 effective search space used: 9274524057864 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
