ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart57c02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009529.1| Triticum aestivum clone wr1.pk0122.a3:fis, full i... 615 e-173
2dbj|AK066687.1| Oryza sativa (japonica cultivar-group) cDNA clon... 400 e-108
3dbj|AB188834.1| Oryza sativa (japonica cultivar-group) OsSK1 mRN... 392 e-106
4gb|AY104682.1| Zea mays PCO108968 mRNA sequence 285 8e-74
5dbj|AB188835.1| Oryza sativa (japonica cultivar-group) OsSK2 mRN... 184 2e-43
6dbj|AK109730.1| Oryza sativa (japonica cultivar-group) cDNA clon... 184 2e-43
7dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 143 7e-31
8dbj|AP005848.3| Oryza sativa (japonica cultivar-group) genomic D... 143 7e-31
9dbj|AP004774.3| Oryza sativa (japonica cultivar-group) genomic D... 143 7e-31
10dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
11dbj|AP003513.2| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
12gb|BT009514.1| Triticum aestivum clone wr1.pk0099.b12:fis, full ... 78 4e-11
13ref|XM_474060.1| Oryza sativa (japonica cultivar-group), predic... 74 5e-10
14dbj|AB188836.1| Oryza sativa (japonica cultivar-group) OsSK3 mRN... 74 5e-10
15dbj|AK070318.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 5e-10
16dbj|AK067948.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
17emb|AL606649.4|OSJN00094 Oryza sativa genomic DNA, chromosome 4,... 52 0.002
18emb|AL606455.3|OSJN00015 Oryza sativa genomic DNA, chromosome 4,... 52 0.002
19dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
20gb|BT016432.1| Zea mays clone Contig265 mRNA sequence 50 0.008
21gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 46 0.12
22emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete ... 44 0.49
23emb|BX640425.1| Bordetella parapertussis strain 12822, complete ... 44 0.49
24gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, compl... 42 1.9
25gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 42 1.9
26gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 42 1.9
27gb|AC093952.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.9
28gb|AC146114.3| Pan troglodytes BAC clone RP43-22O2 from 7, compl... 42 1.9
29emb|AL445242.3| Human DNA sequence from clone RP11-321E11 on chr... 42 1.9
30emb|BX897675.1| Neurospora crassa DNA linkage group IV BAC clone... 42 1.9
31emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.9
32emb|AL646001.7| Mouse DNA sequence from clone RP23-10B17 on chro... 42 1.9
33gb|AC105032.4| Homo sapiens chromosome 18, clone CTD-2272L2, com... 42 1.9
34emb|BX548078.8| Zebrafish DNA sequence from clone CH211-212C13 i... 42 1.9
35dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
36gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 42 1.9
37gb|AC113474.18| Mus musculus chromosome 5, clone RP23-297J17, co... 40 7.7
38ref|XM_476456.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.7
39gb|AC121116.7| Mus musculus chromosome 8, clone RP23-267D22, com... 40 7.7
40gb|BC035014.2| Homo sapiens KIAA1068 protein, mRNA (cDNA clone M... 40 7.7
41gb|AF550415.2| Citrobacter freundii plasmid pCTX-M3, complete se... 40 7.7
42gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 7.7
43ref|XM_415920.1| PREDICTED: Gallus gallus similar to KIAA0664 pr... 40 7.7
44gb|AY605181.1| Burkholderia cepacia complex phage BcepC6B, compl... 40 7.7
45ref|NM_015332.2| Homo sapiens NudC domain containing 3 (NUDCD3),... 40 7.7
46gb|AC166550.2| Nectria haematococca clone JGIAYWI-9G7, complete ... 40 7.7
47gb|AC183550.3| Pan troglodytes BAC clone CH251-48C10 from chromo... 40 7.7
48emb|Z68220.1|CET20D3 Caenorhabditis elegans Cosmid T20D3, comple... 40 7.7
49gb|AY422214.1| Erwinia amylovora strain LebB66 plasmid pEL60 com... 40 7.7
50gb|AC004453.1| Homo sapiens PAC clone RP5-844F9 from 7, complete... 40 7.7
51emb|AL445213.11| Human DNA sequence from clone RP13-52K8 on chro... 40 7.7
52emb|AL445222.9| Human DNA sequence from clone RP11-356B19 on chr... 40 7.7
53gb|AF442964.1| Danio rerio bHLH transcription factor (olig2) mRN... 40 7.7
54emb|AJ488292.1|DRE488292 Danio rerio olig2 gene for bHLH transcr... 40 7.7
55gb|BC065598.1| Danio rerio oligodendrocyte lineage transcription... 40 7.7
56emb|CR858778.1| Pongo pygmaeus mRNA; cDNA DKFZp468N226 (from clo... 40 7.7
57emb|BX571724.9| Zebrafish DNA sequence from clone CH211-165B19 i... 40 7.7
58emb|AJ620477.1| Angiococcus disciformis partial ORF16, ORF15, OR... 40 7.7
59emb|BX936413.10| Zebrafish DNA sequence from clone CH211-48M9 in... 40 7.7
60dbj|AB028991.1| Homo sapiens mRNA for KIAA1068 protein, partial cds 40 7.7
61gb|AE012500.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 7.7
62gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 7.7
63ref|NM_178100.1| Danio rerio oligodendrocyte lineage transcripti... 40 7.7
64gb|AC136636.6| Mus musculus BAC clone RP24-183E22 from chromosom... 40 7.7
65emb|CR385232.1| Gallus gallus finished cDNA, clone ChEST548g1 40 7.7
66gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 7.7
67dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
68gb|AC146064.4| Pan troglodytes BAC clone RP43-59B14 from chromos... 40 7.7
69gb|AC154797.2| Mus musculus BAC clone RP24-494B10 from chromosom... 40 7.7
70dbj|AP005309.5| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
71dbj|AK068837.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.7
72emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 7.7
73gb|BC011673.2| Homo sapiens NudC domain containing 3, mRNA (cDNA... 40 7.7
74gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, comple... 40 7.7
75gb|BC003691.2| Homo sapiens NudC domain containing 3, mRNA (cDNA... 40 7.7
76gb|U27345.1|KPU27345 Klebsiella pneumoniae plasmid pMU407.1 RepC... 40 7.7
77emb|AL683878.9| Mouse DNA sequence from clone RP23-201G13 on chr... 40 7.7
78gb|L12694.1|CHKEN1A01 Gallus gallus engrailed protein (En-1) gen... 40 7.7 
>gb|BT009529.1| Triticum aestivum clone wr1.pk0122.a3:fis, full insert mRNA
           sequence
          Length = 1061

 Score =  615 bits (310), Expect = e-173
 Identities = 349/362 (96%)
 Strand = Plus / Plus

                                                                       
Query: 204 ggtgagcttgcgggtcggtgatcaggtgggatcgccggccgccgtgcgcgcgcgcggggc 263
           |||||||||||| ||| |||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 7   ggtgagcttgcgtgtcagtgatctggtggggtcgccggccgccgtgcgcgcgcgcggggc 66

                                                                       
Query: 264 caagcccgtcgtcccgctccgcgccaagaaatcgtccggaggaggtcaggacaacttgca 323
           |||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||
Sbjct: 67  caagcccgtcgtcccgctccgcgccaagaaatcgtctggaggaggtcatgagaacttgca 126

                                                                       
Query: 324 taactccgttgacgatgccctcttgttgaagagaaaatcagaagaggttcttttccagtt 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 taactccgttgacgatgccctcttgttgaagagaaaatcagaagaggttcttttccagtt 186

                                                                       
Query: 384 gaacggccggtgcatctacctagttggaatgatgggttcggggaaaagcacggtggggaa 443
           |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 187 gaacggtcggtgcatctacctagttggaatgatgggttcggggaaaagtacggtggggaa 246

                                                                       
Query: 444 gatcttggctgaagttttgggttattcgttctttgacagtgataaattggtcgaacaagc 503
           ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 247 gatcttggctgaagttttgggttattcattcttcgacagtgataaattggtcgaacaagc 306

                                                                       
Query: 504 tgttggcatgccttcagttgctcaaattttcaaggttcacagtgaagccttcttcaggga 563
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 307 tgttggcatgccttcagttgctcaaattttcaaggttcatagtgaagccttcttcagaga 366

             
Query: 564 ta 565
           ||
Sbjct: 367 ta 368
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>dbj|AK066687.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074E04, full
           insert sequence
          Length = 1356

 Score =  400 bits (202), Expect = e-108
 Identities = 404/470 (85%), Gaps = 6/470 (1%)
 Strand = Plus / Plus

                                                                       
Query: 99  agcaatggaggcgggcgcggggctggcgctgcagtcgagggccgcggggttcggc---tc 155
           ||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||   ||
Sbjct: 77  agcaatggaggcgggcgtggggctggcgctgcagtcgcgggcggcggggttcggcggctc 136

                                                                       
Query: 156 cggccgccgccggagcgcgatgtacggcggagagagcggggcccggatggtgagcttgcg 215
           || |||||||||||||||| | |||||||| ||| |  |||| ||||| | ||||||| |
Sbjct: 137 cgaccgccgccggagcgcgctctacggcggcgaggggcgggcgcggatcgggagcttgag 196

                                                                       
Query: 216 ggtcggtgatcaggtgggatcgccggccgccgtgcgcgcgcgcggggccaagcccgtcgt 275
           ||||| ||| | || ||   ||  |||||| ||| | || |||||| ||||||| |||| 
Sbjct: 197 ggtcgctgagccggcggtggcgaaggccgctgtgtgggctcgcgggtccaagccggtcgc 256

                                                                       
Query: 276 cccgctccgcgccaagaaatcgtccggaggaggtcaggacaacttgcataactccgttga 335
           ||||||||| ||||||||||||||||||||   ||| || |  ||||||||||| |||||
Sbjct: 257 cccgctccgtgccaagaaatcgtccggagg---tcatgaaacattgcataactcggttga 313

                                                                       
Query: 336 cgatgccctcttgttgaagagaaaatcagaagaggttcttttccagttgaacggccggtg 395
            || ||||||||| | ||||||||||||||||| ||||| ||| | ||||| || |||||
Sbjct: 314 tgaagccctcttgctaaagagaaaatcagaagaagttctcttctatttgaatggacggtg 373

                                                                       
Query: 396 catctacctagttggaatgatgggttcggggaaaagcacggtggggaagatcttggctga 455
            || ||||||||||||||||||||||| || ||||| || ||||| |||||| || ||||
Sbjct: 374 tatttacctagttggaatgatgggttctggaaaaagtactgtgggaaagatcatgtctga 433

                                                                       
Query: 456 agttttgggttattcgttctttgacagtgataaattggtcgaacaagctgttggcatgcc 515
           |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 434 agttttgggttattcgttctttgatagtgataaattggtcgaacaagctgtgggcatgcc 493

                                                             
Query: 516 ttcagttgctcaaattttcaaggttcacagtgaagccttcttcagggata 565
           |||||| |||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 494 ttcagtcgctcaaattttcaaggttcatagtgaagccttctttagggata 543
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>dbj|AB188834.1| Oryza sativa (japonica cultivar-group) OsSK1 mRNA for shikimate
           kinase 1, complete cds
          Length = 927

 Score =  392 bits (198), Expect = e-106
 Identities = 400/466 (85%), Gaps = 6/466 (1%)
 Strand = Plus / Plus

                                                                       
Query: 103 atggaggcgggcgcggggctggcgctgcagtcgagggccgcggggttcggc---tccggc 159
           ||||||||||||| ||||||||||||||||||| |||| ||||||||||||   |||| |
Sbjct: 1   atggaggcgggcgtggggctggcgctgcagtcgcgggcggcggggttcggcggctccgac 60

                                                                       
Query: 160 cgccgccggagcgcgatgtacggcggagagagcggggcccggatggtgagcttgcgggtc 219
           ||||||||||||||| | |||||||| ||| |  |||| ||||| | ||||||| |||||
Sbjct: 61  cgccgccggagcgcgctctacggcggcgaggggcgggcgcggatcgggagcttgagggtc 120

                                                                       
Query: 220 ggtgatcaggtgggatcgccggccgccgtgcgcgcgcgcggggccaagcccgtcgtcccg 279
           | ||| | || ||   ||  |||||| ||| | || |||||| ||||||| |||| ||||
Sbjct: 121 gctgagccggcggtggcgaaggccgctgtgtgggctcgcgggtccaagccggtcgccccg 180

                                                                       
Query: 280 ctccgcgccaagaaatcgtccggaggaggtcaggacaacttgcataactccgttgacgat 339
           ||||| ||||||||||||||||||||   ||| || |  ||||||||||| ||||| || 
Sbjct: 181 ctccgtgccaagaaatcgtccggagg---tcatgaaacattgcataactcggttgatgaa 237

                                                                       
Query: 340 gccctcttgttgaagagaaaatcagaagaggttcttttccagttgaacggccggtgcatc 399
           ||||||||| | ||||||||||||||||| ||||| ||| | ||||| || ||||| || 
Sbjct: 238 gccctcttgctaaagagaaaatcagaagaagttctcttctatttgaatggacggtgtatt 297

                                                                       
Query: 400 tacctagttggaatgatgggttcggggaaaagcacggtggggaagatcttggctgaagtt 459
           ||||||||||||||||||||||| || ||||| || ||||| |||||| || ||||||||
Sbjct: 298 tacctagttggaatgatgggttctggaaaaagtactgtgggaaagatcatgtctgaagtt 357

                                                                       
Query: 460 ttgggttattcgttctttgacagtgataaattggtcgaacaagctgttggcatgccttca 519
           |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 358 ttgggttattcgttctttgatagtgataaattggtcgaacaagctgtgggcatgccttca 417

                                                         
Query: 520 gttgctcaaattttcaaggttcacagtgaagccttcttcagggata 565
           || |||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 418 gtcgctcaaattttcaaggttcatagtgaagccttctttagggata 463
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>gb|AY104682.1| Zea mays PCO108968 mRNA sequence
          Length = 1305

 Score =  285 bits (144), Expect = 8e-74
 Identities = 263/302 (87%), Gaps = 3/302 (0%)
 Strand = Plus / Plus

                                                                       
Query: 256 cgcggggccaagcccgtcgtcccgctccgcgccaagaaatcgtccggaggaggtcaggac 315
           |||||| ||||||||||||| |||||||| || |||||||| ||||||||   ||| || 
Sbjct: 338 cgcgggtccaagcccgtcgtaccgctccgtgcgaagaaatcatccggagg---tcatgaa 394

                                                                       
Query: 316 aacttgcataactccgttgacgatgccctcttgttgaagagaaaatcagaagaggttctt 375
           ||||||||||||||||||||||| || ||| |||||||||||||||||||||| ||||| 
Sbjct: 395 aacttgcataactccgttgacgaagctctcctgttgaagagaaaatcagaagaagttctg 454

                                                                       
Query: 376 ttccagttgaacggccggtgcatctacctagttggaatgatgggttcggggaaaagcacg 435
           ||| | || |||||  |||| || ||| |||| |||||||||||||| || ||||| || 
Sbjct: 455 ttctacttaaacgggaggtgtatttacttagtgggaatgatgggttctggaaaaagtact 514

                                                                       
Query: 436 gtggggaagatcttggctgaagttttgggttattcgttctttgacagtgataaattggtc 495
           |||||||||||| || ||||||| |||||||||||||||||||| ||||| ||||| || 
Sbjct: 515 gtggggaagatcatgtctgaagtcttgggttattcgttctttgatagtgacaaattagtg 574

                                                                       
Query: 496 gaacaagctgttggcatgccttcagttgctcaaattttcaaggttcacagtgaagccttc 555
           || ||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 575 gagcaagctgttggaatgccttcagttgctcaaatattcaaagttcacagtgaagccttc 634

             
Query: 556 tt 557
           ||
Sbjct: 635 tt 636



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 56/66 (84%), Gaps = 3/66 (4%)
 Strand = Plus / Plus

                                                                       
Query: 98  gagcaatggaggcggg---cgcggggctggcgctgcagtcgagggccgcggggttcggct 154
           ||||||||||||||||   || ||| |||||||||||| || |||| ||||  |||||||
Sbjct: 192 gagcaatggaggcggggggcgtgggcctggcgctgcagacgcgggcggcggccttcggct 251

                 
Query: 155 ccggcc 160
           ||||||
Sbjct: 252 ccggcc 257
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>dbj|AB188835.1| Oryza sativa (japonica cultivar-group) OsSK2 mRNA for shikimate
           kinase 2, complete cds
          Length = 924

 Score =  184 bits (93), Expect = 2e-43
 Identities = 213/253 (84%)
 Strand = Plus / Plus

                                                                       
Query: 313 gacaacttgcataactccgttgacgatgccctcttgttgaagagaaaatcagaagaggtt 372
           |||| |||||||||||| ||||| || |||||| |||| ||||| ||||||||||| |||
Sbjct: 205 gacagcttgcataactcagttgatgaagccctcctgttaaagaggaaatcagaagaagtt 264

                                                                       
Query: 373 cttttccagttgaacggccggtgcatctacctagttggaatgatgggttcggggaaaagc 432
           || ||| | |||||||| ||||| || ||  |||||||||||||||| || ||||| || 
Sbjct: 265 ctattctacttgaacggacggtgtatttatttagttggaatgatgggctcagggaagagt 324

                                                                       
Query: 433 acggtggggaagatcttggctgaagttttgggttattcgttctttgacagtgataaattg 492
           || || |  ||||| || || ||||||||||||||||| ||||||||||||||||| |||
Sbjct: 325 acagttgcaaagatattagccgaagttttgggttattcattctttgacagtgataagttg 384

                                                                       
Query: 493 gtcgaacaagctgttggcatgccttcagttgctcaaattttcaaggttcacagtgaagcc 552
           || |||||||| ||||| |||||||| ||||| ||||| |||||||  ||||||||||| 
Sbjct: 385 gttgaacaagcagttggaatgccttctgttgcccaaatattcaaggagcacagtgaagcg 444

                        
Query: 553 ttcttcagggata 565
           || ||||| ||||
Sbjct: 445 tttttcagagata 457
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>dbj|AK109730.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-B12, full
            insert sequence
          Length = 1918

 Score =  184 bits (93), Expect = 2e-43
 Identities = 213/253 (84%)
 Strand = Plus / Plus

                                                                        
Query: 313  gacaacttgcataactccgttgacgatgccctcttgttgaagagaaaatcagaagaggtt 372
            |||| |||||||||||| ||||| || |||||| |||| ||||| ||||||||||| |||
Sbjct: 989  gacagcttgcataactcagttgatgaagccctcctgttaaagaggaaatcagaagaagtt 1048

                                                                        
Query: 373  cttttccagttgaacggccggtgcatctacctagttggaatgatgggttcggggaaaagc 432
            || ||| | |||||||| ||||| || ||  |||||||||||||||| || ||||| || 
Sbjct: 1049 ctattctacttgaacggacggtgtatttatttagttggaatgatgggctcagggaagagt 1108

                                                                        
Query: 433  acggtggggaagatcttggctgaagttttgggttattcgttctttgacagtgataaattg 492
            || || |  ||||| || || ||||||||||||||||| ||||||||||||||||| |||
Sbjct: 1109 acagttgcaaagatattagccgaagttttgggttattcattctttgacagtgataagttg 1168

                                                                        
Query: 493  gtcgaacaagctgttggcatgccttcagttgctcaaattttcaaggttcacagtgaagcc 552
            || |||||||| ||||| |||||||| ||||| ||||| |||||||  ||||||||||| 
Sbjct: 1169 gttgaacaagcagttggaatgccttctgttgcccaaatattcaaggagcacagtgaagcg 1228

                         
Query: 553  ttcttcagggata 565
            || ||||| ||||
Sbjct: 1229 tttttcagagata 1241



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 100 gcaatggaggcgggcgcggggctggcgctgcagtcgagggc 140
           |||||||||||  | |||||||||||| |||||||| ||||
Sbjct: 105 gcaatggaggctagagcggggctggcgatgcagtcgcgggc 145
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  143 bits (72), Expect = 7e-31
 Identities = 176/210 (83%), Gaps = 3/210 (1%)
 Strand = Plus / Plus

                                                                            
Query: 99       agcaatggaggcgggcgcggggctggcgctgcagtcgagggccgcggggtt---cggctc 155
                ||||||||||||||||| ||||||||||||||||||| |||| ||||||||   ||||||
Sbjct: 31510265 agcaatggaggcgggcgtggggctggcgctgcagtcgcgggcggcggggttcggcggctc 31510324

                                                                            
Query: 156      cggccgccgccggagcgcgatgtacggcggagagagcggggcccggatggtgagcttgcg 215
                || |||||||||||||||| | |||||||| ||| |  |||| ||||| | ||||||| |
Sbjct: 31510325 cgaccgccgccggagcgcgctctacggcggcgaggggcgggcgcggatcgggagcttgag 31510384

                                                                            
Query: 216      ggtcggtgatcaggtgggatcgccggccgccgtgcgcgcgcgcggggccaagcccgtcgt 275
                ||||| ||| | || ||   ||  |||||| ||| | || |||||| ||||||| |||| 
Sbjct: 31510385 ggtcgctgagccggcggtggcgaaggccgctgtgtgggctcgcgggtccaagccggtcgc 31510444

                                              
Query: 276      cccgctccgcgccaagaaatcgtccggagg 305
                ||||||||| ||||||||||||||||||||
Sbjct: 31510445 cccgctccgtgccaagaaatcgtccggagg 31510474



 Score =  139 bits (70), Expect = 1e-29
 Identities = 82/86 (95%)
 Strand = Plus / Plus

                                                                            
Query: 480      cagtgataaattggtcgaacaagctgttggcatgccttcagttgctcaaattttcaaggt 539
                ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 31511438 cagtgataaattggtcgaacaagctgtgggcatgccttcagtcgctcaaattttcaaggt 31511497

                                          
Query: 540      tcacagtgaagccttcttcagggata 565
                ||| |||||||||||||| |||||||
Sbjct: 31511498 tcatagtgaagccttctttagggata 31511523



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 64/71 (90%)
 Strand = Plus / Plus

                                                                            
Query: 409      ggaatgatgggttcggggaaaagcacggtggggaagatcttggctgaagttttgggttat 468
                |||||||||||||| || ||||| || ||||| |||||| || |||||||||||||||||
Sbjct: 31511281 ggaatgatgggttctggaaaaagtactgtgggaaagatcatgtctgaagttttgggttat 31511340

                           
Query: 469      tcgttctttga 479
                |||||||||||
Sbjct: 31511341 tcgttctttga 31511351



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                          
Query: 353      agagaaaatcagaagaggttcttttccagttgaacggccggtgcatctacctagttgg 410
                |||||||||||||||| ||||| ||| | ||||| || ||||| || |||||||||||
Sbjct: 31511121 agagaaaatcagaagaagttctcttctatttgaatggacggtgtatttacctagttgg 31511178
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>dbj|AP005848.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0078N11
          Length = 155168

 Score =  143 bits (72), Expect = 7e-31
 Identities = 176/210 (83%), Gaps = 3/210 (1%)
 Strand = Plus / Plus

                                                                          
Query: 99     agcaatggaggcgggcgcggggctggcgctgcagtcgagggccgcggggtt---cggctc 155
              ||||||||||||||||| ||||||||||||||||||| |||| ||||||||   ||||||
Sbjct: 145662 agcaatggaggcgggcgtggggctggcgctgcagtcgcgggcggcggggttcggcggctc 145721

                                                                          
Query: 156    cggccgccgccggagcgcgatgtacggcggagagagcggggcccggatggtgagcttgcg 215
              || |||||||||||||||| | |||||||| ||| |  |||| ||||| | ||||||| |
Sbjct: 145722 cgaccgccgccggagcgcgctctacggcggcgaggggcgggcgcggatcgggagcttgag 145781

                                                                          
Query: 216    ggtcggtgatcaggtgggatcgccggccgccgtgcgcgcgcgcggggccaagcccgtcgt 275
              ||||| ||| | || ||   ||  |||||| ||| | || |||||| ||||||| |||| 
Sbjct: 145782 ggtcgctgagccggcggtggcgaaggccgctgtgtgggctcgcgggtccaagccggtcgc 145841

                                            
Query: 276    cccgctccgcgccaagaaatcgtccggagg 305
              ||||||||| ||||||||||||||||||||
Sbjct: 145842 cccgctccgtgccaagaaatcgtccggagg 145871



 Score =  139 bits (70), Expect = 1e-29
 Identities = 82/86 (95%)
 Strand = Plus / Plus

                                                                          
Query: 480    cagtgataaattggtcgaacaagctgttggcatgccttcagttgctcaaattttcaaggt 539
              ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 146835 cagtgataaattggtcgaacaagctgtgggcatgccttcagtcgctcaaattttcaaggt 146894

                                        
Query: 540    tcacagtgaagccttcttcagggata 565
              ||| |||||||||||||| |||||||
Sbjct: 146895 tcatagtgaagccttctttagggata 146920



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 64/71 (90%)
 Strand = Plus / Plus

                                                                          
Query: 409    ggaatgatgggttcggggaaaagcacggtggggaagatcttggctgaagttttgggttat 468
              |||||||||||||| || ||||| || ||||| |||||| || |||||||||||||||||
Sbjct: 146678 ggaatgatgggttctggaaaaagtactgtgggaaagatcatgtctgaagttttgggttat 146737

                         
Query: 469    tcgttctttga 479
              |||||||||||
Sbjct: 146738 tcgttctttga 146748



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                        
Query: 353    agagaaaatcagaagaggttcttttccagttgaacggccggtgcatctacctagttgg 410
              |||||||||||||||| ||||| ||| | ||||| || ||||| || |||||||||||
Sbjct: 146518 agagaaaatcagaagaagttctcttctatttgaatggacggtgtatttacctagttgg 146575
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>dbj|AP004774.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0431B06
          Length = 154796

 Score =  143 bits (72), Expect = 7e-31
 Identities = 176/210 (83%), Gaps = 3/210 (1%)
 Strand = Plus / Plus

                                                                        
Query: 99   agcaatggaggcgggcgcggggctggcgctgcagtcgagggccgcggggtt---cggctc 155
            ||||||||||||||||| ||||||||||||||||||| |||| ||||||||   ||||||
Sbjct: 825  agcaatggaggcgggcgtggggctggcgctgcagtcgcgggcggcggggttcggcggctc 884

                                                                        
Query: 156  cggccgccgccggagcgcgatgtacggcggagagagcggggcccggatggtgagcttgcg 215
            || |||||||||||||||| | |||||||| ||| |  |||| ||||| | ||||||| |
Sbjct: 885  cgaccgccgccggagcgcgctctacggcggcgaggggcgggcgcggatcgggagcttgag 944

                                                                        
Query: 216  ggtcggtgatcaggtgggatcgccggccgccgtgcgcgcgcgcggggccaagcccgtcgt 275
            ||||| ||| | || ||   ||  |||||| ||| | || |||||| ||||||| |||| 
Sbjct: 945  ggtcgctgagccggcggtggcgaaggccgctgtgtgggctcgcgggtccaagccggtcgc 1004

                                          
Query: 276  cccgctccgcgccaagaaatcgtccggagg 305
            ||||||||| ||||||||||||||||||||
Sbjct: 1005 cccgctccgtgccaagaaatcgtccggagg 1034



 Score =  139 bits (70), Expect = 1e-29
 Identities = 82/86 (95%)
 Strand = Plus / Plus

                                                                        
Query: 480  cagtgataaattggtcgaacaagctgttggcatgccttcagttgctcaaattttcaaggt 539
            ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 1998 cagtgataaattggtcgaacaagctgtgggcatgccttcagtcgctcaaattttcaaggt 2057

                                      
Query: 540  tcacagtgaagccttcttcagggata 565
            ||| |||||||||||||| |||||||
Sbjct: 2058 tcatagtgaagccttctttagggata 2083



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 64/71 (90%)
 Strand = Plus / Plus

                                                                        
Query: 409  ggaatgatgggttcggggaaaagcacggtggggaagatcttggctgaagttttgggttat 468
            |||||||||||||| || ||||| || ||||| |||||| || |||||||||||||||||
Sbjct: 1841 ggaatgatgggttctggaaaaagtactgtgggaaagatcatgtctgaagttttgggttat 1900

                       
Query: 469  tcgttctttga 479
            |||||||||||
Sbjct: 1901 tcgttctttga 1911



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                      
Query: 353  agagaaaatcagaagaggttcttttccagttgaacggccggtgcatctacctagttgg 410
            |||||||||||||||| ||||| ||| | ||||| || ||||| || |||||||||||
Sbjct: 1681 agagaaaatcagaagaagttctcttctatttgaatggacggtgtatttacctagttgg 1738
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  121 bits (61), Expect = 3e-24
 Identities = 133/157 (84%)
 Strand = Plus / Minus

                                                                           
Query: 409     ggaatgatgggttcggggaaaagcacggtggggaagatcttggctgaagttttgggttat 468
               ||||||||||| || ||||| || || || |  ||||| || || |||||||||||||||
Sbjct: 6507397 ggaatgatgggctcagggaagagtacagttgcaaagatattagccgaagttttgggttat 6507338

                                                                           
Query: 469     tcgttctttgacagtgataaattggtcgaacaagctgttggcatgccttcagttgctcaa 528
               || ||||||||||||||||| ||||| |||||||| ||||| |||||||| ||||| |||
Sbjct: 6507337 tcattctttgacagtgataagttggttgaacaagcagttggaatgccttctgttgcccaa 6507278

                                                    
Query: 529     attttcaaggttcacagtgaagccttcttcagggata 565
               || |||||||  ||||||||||| || ||||| ||||
Sbjct: 6507277 atattcaaggagcacagtgaagcgtttttcagagata 6507241



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                        
Query: 100     gcaatggaggcgggcgcggggctggcgctgcagtcgagggc 140
               |||||||||||  | |||||||||||| |||||||| ||||
Sbjct: 6508617 gcaatggaggctagagcggggctggcgatgcagtcgcgggc 6508577
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>dbj|AP003513.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0690H04
          Length = 137319

 Score =  121 bits (61), Expect = 3e-24
 Identities = 133/157 (84%)
 Strand = Plus / Minus

                                                                         
Query: 409   ggaatgatgggttcggggaaaagcacggtggggaagatcttggctgaagttttgggttat 468
             ||||||||||| || ||||| || || || |  ||||| || || |||||||||||||||
Sbjct: 23773 ggaatgatgggctcagggaagagtacagttgcaaagatattagccgaagttttgggttat 23714

                                                                         
Query: 469   tcgttctttgacagtgataaattggtcgaacaagctgttggcatgccttcagttgctcaa 528
             || ||||||||||||||||| ||||| |||||||| ||||| |||||||| ||||| |||
Sbjct: 23713 tcattctttgacagtgataagttggttgaacaagcagttggaatgccttctgttgcccaa 23654

                                                  
Query: 529   attttcaaggttcacagtgaagccttcttcagggata 565
             || |||||||  ||||||||||| || ||||| ||||
Sbjct: 23653 atattcaaggagcacagtgaagcgtttttcagagata 23617



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 100   gcaatggaggcgggcgcggggctggcgctgcagtcgagggc 140
             |||||||||||  | |||||||||||| |||||||| ||||
Sbjct: 24993 gcaatggaggctagagcggggctggcgatgcagtcgcgggc 24953
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>gb|BT009514.1| Triticum aestivum clone wr1.pk0099.b12:fis, full insert mRNA
           sequence
          Length = 1323

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 132/163 (80%)
 Strand = Plus / Plus

                                                                       
Query: 403 ctagttggaatgatgggttcggggaaaagcacggtggggaagatcttggctgaagttttg 462
           |||||||||||||||||||| || ||||  || || ||||||||  | ||||||||  | 
Sbjct: 272 ctagttggaatgatgggttccggcaaaactacagttgggaagataatagctgaagtacta 331

                                                                       
Query: 463 ggttattcgttctttgacagtgataaattggtcgaacaagctgttggcatgccttcagtt 522
           || ||||| |||||||||||||||||  |||| || ||  |||||||||| || || || 
Sbjct: 332 ggctattcattctttgacagtgataagctggttgagcagtctgttggcataccgtcggtg 391

                                                      
Query: 523 gctcaaattttcaaggttcacagtgaagccttcttcagggata 565
           ||| | |||||  |||| ||||||||||| |||||||| ||||
Sbjct: 392 gctgagatttttcaggtccacagtgaagcattcttcagagata 434
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>ref|XM_474060.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 864

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 88/105 (83%)
 Strand = Plus / Plus

                                                                       
Query: 390 ccggtgcatctacctagttggaatgatgggttcggggaaaagcacggtggggaagatctt 449
           |||||| || ||| ||||||||||||||||||| || ||||  || || |||||||| ||
Sbjct: 273 ccggtgtatttacttagttggaatgatgggttctggcaaaactacagttgggaagatatt 332

                                                        
Query: 450 ggctgaagttttgggttattcgttctttgacagtgataaattggt 494
            |||||||| || || ||||| ||||||||||| ||||| |||||
Sbjct: 333 agctgaagtattaggctattctttctttgacagcgataagttggt 377
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>dbj|AB188836.1| Oryza sativa (japonica cultivar-group) OsSK3 mRNA for shikimate
           kinase 3, complete cds
          Length = 864

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 88/105 (83%)
 Strand = Plus / Plus

                                                                       
Query: 390 ccggtgcatctacctagttggaatgatgggttcggggaaaagcacggtggggaagatctt 449
           |||||| || ||| ||||||||||||||||||| || ||||  || || |||||||| ||
Sbjct: 273 ccggtgtatttacttagttggaatgatgggttctggcaaaactacagttgggaagatatt 332

                                                        
Query: 450 ggctgaagttttgggttattcgttctttgacagtgataaattggt 494
            |||||||| || || ||||| ||||||||||| ||||| |||||
Sbjct: 333 agctgaagtattaggctattctttctttgacagcgataagttggt 377
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>dbj|AK070318.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052O21, full
           insert sequence
          Length = 1167

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 88/105 (83%)
 Strand = Plus / Plus

                                                                       
Query: 390 ccggtgcatctacctagttggaatgatgggttcggggaaaagcacggtggggaagatctt 449
           |||||| || ||| ||||||||||||||||||| || ||||  || || |||||||| ||
Sbjct: 451 ccggtgtatttacttagttggaatgatgggttctggcaaaactacagttgggaagatatt 510

                                                        
Query: 450 ggctgaagttttgggttattcgttctttgacagtgataaattggt 494
            |||||||| || || ||||| ||||||||||| ||||| |||||
Sbjct: 511 agctgaagtattaggctattctttctttgacagcgataagttggt 555
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>dbj|AK067948.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123F09, full
            insert sequence
          Length = 2127

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 78/93 (83%)
 Strand = Plus / Plus

                                                                        
Query: 390  ccggtgcatctacctagttggaatgatgggttcggggaaaagcacggtggggaagatctt 449
            |||||| || ||| ||||||||||||||||||| || ||||  || || |||||||| ||
Sbjct: 969  ccggtgtatttacttagttggaatgatgggttctggcaaaactacagttgggaagatatt 1028

                                             
Query: 450  ggctgaagttttgggttattcgttctttgacag 482
             |||||||| || || ||||| |||||||||||
Sbjct: 1029 agctgaagtattaggctattctttctttgacag 1061
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>emb|AL606649.4|OSJN00094 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0003B01,
              complete sequence
          Length = 153643

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                          
Query: 409    ggaatgatgggttcggggaaaagcacggtggggaagatcttggctgaagttttgggttat 468
              |||||||||||||| || ||||  || || |||||||| || |||||||| || || |||
Sbjct: 136285 ggaatgatgggttctggcaaaactacagttgggaagatattagctgaagtattaggctat 136226

                            
Query: 469    tcgttctttgacag 482
              || |||||||||||
Sbjct: 136225 tctttctttgacag 136212
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>emb|AL606455.3|OSJN00015 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0079B02,
             complete sequence
          Length = 126659

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                         
Query: 409   ggaatgatgggttcggggaaaagcacggtggggaagatcttggctgaagttttgggttat 468
             |||||||||||||| || ||||  || || |||||||| || |||||||| || || |||
Sbjct: 12572 ggaatgatgggttctggcaaaactacagttgggaagatattagctgaagtattaggctat 12513

                           
Query: 469   tcgttctttgacag 482
             || |||||||||||
Sbjct: 12512 tctttctttgacag 12499
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                            
Query: 409      ggaatgatgggttcggggaaaagcacggtggggaagatcttggctgaagttttgggttat 468
                |||||||||||||| || ||||  || || |||||||| || |||||||| || || |||
Sbjct: 32617551 ggaatgatgggttctggcaaaactacagttgggaagatattagctgaagtattaggctat 32617492

                              
Query: 469      tcgttctttgacag 482
                || |||||||||||
Sbjct: 32617491 tctttctttgacag 32617478
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>gb|BT016432.1| Zea mays clone Contig265 mRNA sequence
          Length = 1310

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 73/89 (82%)
 Strand = Plus / Plus

                                                                       
Query: 406 gttggaatgatgggttcggggaaaagcacggtggggaagatcttggctgaagttttgggt 465
           ||||||||||||||||| || ||||  || || ||||||||  |  | ||||| || |||
Sbjct: 533 gttggaatgatgggttcaggcaaaactacagttgggaagatactatccgaagtgttaggt 592

                                        
Query: 466 tattcgttctttgacagtgataaattggt 494
           ||||| ||||| ||||||||||| |||||
Sbjct: 593 tattccttcttcgacagtgataagttggt 621
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                              
Query: 235     tcgccggccgccgtgcgcgcgcgcggggcca 265
               ||||||||||||| |||||||||| ||||||
Sbjct: 3576630 tcgccggccgccgcgcgcgcgcgccgggcca 3576660
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>emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete genome; segment 3/16
          Length = 346362

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 105    ggaggcgggcgcggggctggcgctgc 130
              |||||||||||| |||||||||||||
Sbjct: 164399 ggaggcgggcgccgggctggcgctgc 164374
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>emb|BX640425.1| Bordetella parapertussis strain 12822, complete genome; segment 3/14
          Length = 348257

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 105   ggaggcgggcgcggggctggcgctgc 130
             |||||||||||| |||||||||||||
Sbjct: 77205 ggaggcgggcgccgggctggcgctgc 77180
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>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome
          Length = 943016

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 112    ggcgcggggctggcgctgcag 132
              |||||||||||||||||||||
Sbjct: 243572 ggcgcggggctggcgctgcag 243552
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 248    tgcgcgcgcgcggggccaagc 268
              |||||||||||||||||||||
Sbjct: 109512 tgcgcgcgcgcggggccaagc 109532
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 248    tgcgcgcgcgcggggccaagc 268
              |||||||||||||||||||||
Sbjct: 591778 tgcgcgcgcgcggggccaagc 591758
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>gb|AC093952.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1004_E02,
             complete sequence
          Length = 127642

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 471   gttctttgacagtgataaatt 491
             |||||||||||||||||||||
Sbjct: 43924 gttctttgacagtgataaatt 43904
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>gb|AC146114.3| Pan troglodytes BAC clone RP43-22O2 from 7, complete sequence
          Length = 176328

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 524   ctcaaattttcaaggttcaca 544
             |||||||||||||||||||||
Sbjct: 76402 ctcaaattttcaaggttcaca 76382
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>emb|AL445242.3| Human DNA sequence from clone RP11-321E11 on chromosome 13, complete
             sequence
          Length = 160177

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 524   ctcaaattttcaaggttcaca 544
             |||||||||||||||||||||
Sbjct: 59774 ctcaaattttcaaggttcaca 59794
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>emb|BX897675.1| Neurospora crassa DNA linkage group IV BAC clone B2E7
          Length = 68291

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 330   cgttgacgatgccctcttgtt 350
             |||||||||||||||||||||
Sbjct: 37058 cgttgacgatgccctcttgtt 37038
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 248    tgcgcgcgcgcggggccaagc 268
              |||||||||||||||||||||
Sbjct: 400350 tgcgcgcgcgcggggccaagc 400330
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>emb|AL646001.7| Mouse DNA sequence from clone RP23-10B17 on chromosome 11 Contains the 5'
              end of a variant of the Odz2 gene for odd Oz/ten-m homolog
              2 (Drosophila), complete sequence
          Length = 194171

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 544    agtgaagccttcttcagggat 564
              |||||||||||||||||||||
Sbjct: 190270 agtgaagccttcttcagggat 190290
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>gb|AC105032.4| Homo sapiens chromosome 18, clone CTD-2272L2, complete sequence
          Length = 95865

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 524   ctcaaattttcaaggttcaca 544
             |||||||||||||||||||||
Sbjct: 25808 ctcaaattttcaaggttcaca 25828
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>emb|BX548078.8| Zebrafish DNA sequence from clone CH211-212C13 in linkage group 15,
              complete sequence
          Length = 205316

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 18     atcaccggacacctgccaaaa 38
              |||||||||||||||||||||
Sbjct: 162959 atcaccggacacctgccaaaa 162939
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 471      gttctttgacagtgataaatt 491
                |||||||||||||||||||||
Sbjct: 23763103 gttctttgacagtgataaatt 23763083
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 110     cgggcgcggggctggcgctgc 130
               |||||||||||||||||||||
Sbjct: 1302233 cgggcgcggggctggcgctgc 1302253
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>gb|AC113474.18| Mus musculus chromosome 5, clone RP23-297J17, complete sequence
          Length = 219936

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 496    gaacaagctgttggcatgcc 515
              ||||||||||||||||||||
Sbjct: 139832 gaacaagctgttggcatgcc 139813
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>ref|XM_476456.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1054

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 241 gccgccgtgcgcgcgcgcgg 260
           ||||||||||||||||||||
Sbjct: 46  gccgccgtgcgcgcgcgcgg 27
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>gb|AC121116.7| Mus musculus chromosome 8, clone RP23-267D22, complete sequence
          Length = 200891

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 304   ggaggtcaggacaacttgca 323
             ||||||||||||||||||||
Sbjct: 63237 ggaggtcaggacaacttgca 63256
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>gb|BC035014.2| Homo sapiens KIAA1068 protein, mRNA (cDNA clone MGC:33478
           IMAGE:4812229), complete cds
          Length = 3604

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 349 ttgaagagaaaatcagaaga 368
           ||||||||||||||||||||
Sbjct: 335 ttgaagagaaaatcagaaga 354
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>gb|AF550415.2| Citrobacter freundii plasmid pCTX-M3, complete sequence
          Length = 89468

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 422   cggggaaaagcacggtgggg 441
             ||||||||||||||||||||
Sbjct: 56385 cggggaaaagcacggtgggg 56366
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 235     tcgccggccgccgtgcgcgcgcgc 258
               |||||||| |||||||||||||||
Sbjct: 1576316 tcgccggcggccgtgcgcgcgcgc 1576293
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>ref|XM_415920.1| PREDICTED: Gallus gallus similar to KIAA0664 protein (LOC417675),
            mRNA
          Length = 5549

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 529  attttcaaggttcacagtga 548
            ||||||||||||||||||||
Sbjct: 2395 attttcaaggttcacagtga 2414
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>gb|AY605181.1| Burkholderia cepacia complex phage BcepC6B, complete genome
          Length = 42415

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 237  gccggccgccgtgcgcgcgc 256
            ||||||||||||||||||||
Sbjct: 1002 gccggccgccgtgcgcgcgc 1021
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>ref|NM_015332.2| Homo sapiens NudC domain containing 3 (NUDCD3), mRNA
          Length = 3572

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 349 ttgaagagaaaatcagaaga 368
           ||||||||||||||||||||
Sbjct: 298 ttgaagagaaaatcagaaga 317
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>gb|AC166550.2| Nectria haematococca clone JGIAYWI-9G7, complete sequence
          Length = 45496

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    cgcgagagagccgcagccga 59
             ||||||||||||||||||||
Sbjct: 23954 cgcgagagagccgcagccga 23973
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>gb|AC183550.3| Pan troglodytes BAC clone CH251-48C10 from chromosome 7, complete
              sequence
          Length = 163417

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 349    ttgaagagaaaatcagaaga 368
              ||||||||||||||||||||
Sbjct: 128097 ttgaagagaaaatcagaaga 128078
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>emb|Z68220.1|CET20D3 Caenorhabditis elegans Cosmid T20D3, complete sequence
          Length = 32679

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 349   ttgaagagaaaatcagaaga 368
             ||||||||||||||||||||
Sbjct: 31475 ttgaagagaaaatcagaaga 31494
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>gb|AY422214.1| Erwinia amylovora strain LebB66 plasmid pEL60 complete sequence
          Length = 60145

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 422   cggggaaaagcacggtgggg 441
             ||||||||||||||||||||
Sbjct: 53601 cggggaaaagcacggtgggg 53582
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>gb|AC004453.1| Homo sapiens PAC clone RP5-844F9 from 7, complete sequence
          Length = 146500

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 349   ttgaagagaaaatcagaaga 368
             ||||||||||||||||||||
Sbjct: 16149 ttgaagagaaaatcagaaga 16168
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>emb|AL445213.11| Human DNA sequence from clone RP13-52K8 on chromosome X Contains a
             pseudogene similar to part of SLC9A2 (solute carrier
             family 9 (sodium/hydrogen exchanger), isoform 2), complete
             sequence
          Length = 190604

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 355   agaaaatcagaagaggttct 374
             ||||||||||||||||||||
Sbjct: 84440 agaaaatcagaagaggttct 84421
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>emb|AL445222.9| Human DNA sequence from clone RP11-356B19 on chromosome 9 Contains the 3'
              end of the gene for a novel protein (DKFZp761J1523), the
              SLC2A8 gene for solute carrier family 2, (facilitated
              glucose transporter) member 8 (glucose transporter
              X1)(GLUT8, GLUTX1), the ZNF79 gene for zinc finger protein
              79 (pT7), the RPL12 gene for ribosomal protein L12 (60S
              ribosomal protein L12), the gene for a novel protein, the
              gene for a novel protein (DKFZP434H0820)(FLJ13518,
              FLJ22151, FLJ22298) and four Cpg islands, complete sequence
          Length = 225370

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 524    ctcaaattttcaaggttcacagtg 547
              |||||||||||| |||||||||||
Sbjct: 168543 ctcaaattttcagggttcacagtg 168566
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>gb|AF442964.1| Danio rerio bHLH transcription factor (olig2) mRNA, complete cds
          Length = 1691

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 168 gagcgcgatgtacggcggagagagcggggccc 199
           ||||| ||| |||||||||| |||||||||||
Sbjct: 556 gagcgagatctacggcggagggagcggggccc 587
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>emb|AJ488292.1|DRE488292 Danio rerio olig2 gene for bHLH transcription factor 2, exons 1-2
          Length = 2072

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 168  gagcgcgatgtacggcggagagagcggggccc 199
            ||||| ||| |||||||||| |||||||||||
Sbjct: 981  gagcgagatctacggcggagggagcggggccc 1012
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>gb|BC065598.1| Danio rerio oligodendrocyte lineage transcription factor 2, mRNA
           (cDNA clone MGC:76800 IMAGE:6964656), complete cds
          Length = 1717

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 168 gagcgcgatgtacggcggagagagcggggccc 199
           ||||| ||| |||||||||| |||||||||||
Sbjct: 557 gagcgagatctacggcggagggagcggggccc 588
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>emb|CR858778.1| Pongo pygmaeus mRNA; cDNA DKFZp468N226 (from clone DKFZp468N226)
          Length = 3542

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 349 ttgaagagaaaatcagaaga 368
           ||||||||||||||||||||
Sbjct: 270 ttgaagagaaaatcagaaga 289
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>emb|BX571724.9| Zebrafish DNA sequence from clone CH211-165B19 in linkage group 9,
              complete sequence
          Length = 174709

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 168    gagcgcgatgtacggcggagagagcggggccc 199
              ||||| ||| |||||||||| |||||||||||
Sbjct: 172222 gagcgagatctacggcggagggagcggggccc 172191
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>emb|AJ620477.1| Angiococcus disciformis partial ORF16, ORF15, ORF14, ORF13, ORF12,
             ORF11, ORF10, ORF9, ORF8, ORF7, ORF6, ORF5, ORF4, ORF3,
             tubA gene, ORF2, tubZ gene, ORF1, tubB gene, tubC gene,
             tubD gene, tubE gene, tubF gene, ORF17, ORF18, ORF19,
             ORF20, tubG gene, ORF21, ORF22, ORF23 and ORF24, strain An
             d48
          Length = 82868

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 138   ggccgcggggttcggctccg 157
             ||||||||||||||||||||
Sbjct: 80426 ggccgcggggttcggctccg 80445
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>emb|BX936413.10| Zebrafish DNA sequence from clone CH211-48M9 in linkage group 5,
             complete sequence
          Length = 87051

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 344   tcttgttgaagagaaaatcagaag 367
             ||||||||||||||||||| ||||
Sbjct: 78535 tcttgttgaagagaaaatctgaag 78512
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>dbj|AB028991.1| Homo sapiens mRNA for KIAA1068 protein, partial cds
          Length = 4793

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 349 ttgaagagaaaatcagaaga 368
           ||||||||||||||||||||
Sbjct: 231 ttgaagagaaaatcagaaga 250
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>gb|AE012500.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 408
            of 460 of the complete genome
          Length = 10116

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 237  gccggccgccgtgcgcgcgc 256
            ||||||||||||||||||||
Sbjct: 9299 gccggccgccgtgcgcgcgc 9280
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>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 150     cggctccggccgccgccgga 169
               ||||||||||||||||||||
Sbjct: 4261387 cggctccggccgccgccgga 4261406
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>ref|NM_178100.1| Danio rerio oligodendrocyte lineage transcription factor 2 (olig2),
           mRNA
          Length = 1653

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 168 gagcgcgatgtacggcggagagagcggggccc 199
           ||||| ||| |||||||||| |||||||||||
Sbjct: 556 gagcgagatctacggcggagggagcggggccc 587
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>gb|AC136636.6| Mus musculus BAC clone RP24-183E22 from chromosome 1, complete sequence
          Length = 182542

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 304    ggaggtcaggacaacttgca 323
              ||||||||||||||||||||
Sbjct: 127759 ggaggtcaggacaacttgca 127740
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>emb|CR385232.1| Gallus gallus finished cDNA, clone ChEST548g1
          Length = 895

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 529 attttcaaggttcacagtga 548
           ||||||||||||||||||||
Sbjct: 137 attttcaaggttcacagtga 156
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 237     gccggccgccgtgcgcgcgc 256
               ||||||||||||||||||||
Sbjct: 4573705 gccggccgccgtgcgcgcgc 4573686
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 241     gccgccgtgcgcgcgcgcgg 260
               ||||||||||||||||||||
Sbjct: 1315401 gccgccgtgcgcgcgcgcgg 1315420
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>gb|AC146064.4| Pan troglodytes BAC clone RP43-59B14 from chromosome 7, complete
             sequence
          Length = 186687

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 349   ttgaagagaaaatcagaaga 368
             ||||||||||||||||||||
Sbjct: 15273 ttgaagagaaaatcagaaga 15254
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>gb|AC154797.2| Mus musculus BAC clone RP24-494B10 from chromosome 17, complete
             sequence
          Length = 140053

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 459   tttgggttattcgttctttg 478
             ||||||||||||||||||||
Sbjct: 39641 tttgggttattcgttctttg 39660
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>dbj|AP005309.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0474G09
          Length = 169511

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 241   gccgccgtgcgcgcgcgcgg 260
             ||||||||||||||||||||
Sbjct: 80236 gccgccgtgcgcgcgcgcgg 80255
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>dbj|AK068837.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159A01, full
           insert sequence
          Length = 1054

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 241 gccgccgtgcgcgcgcgcgg 260
           ||||||||||||||||||||
Sbjct: 46  gccgccgtgcgcgcgcgcgg 27
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 210     cttgcgggtcggtgatcagg 229
               ||||||||||||||||||||
Sbjct: 3442270 cttgcgggtcggtgatcagg 3442251
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>gb|BC011673.2| Homo sapiens NudC domain containing 3, mRNA (cDNA clone MGC:14963
           IMAGE:4300217), complete cds
          Length = 3329

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 349 ttgaagagaaaatcagaaga 368
           ||||||||||||||||||||
Sbjct: 57  ttgaagagaaaatcagaaga 76
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>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome
          Length = 156487

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 143   cggggttcggctccggccgc 162
             ||||||||||||||||||||
Sbjct: 53427 cggggttcggctccggccgc 53446
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>gb|BC003691.2| Homo sapiens NudC domain containing 3, mRNA (cDNA clone MGC:5503
           IMAGE:3453305), complete cds
          Length = 3572

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 349 ttgaagagaaaatcagaaga 368
           ||||||||||||||||||||
Sbjct: 298 ttgaagagaaaatcagaaga 317
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>gb|U27345.1|KPU27345 Klebsiella pneumoniae plasmid pMU407.1 RepC (repC), RepB (repB) and
            replication initiation protein RepA (repA) genes,
            complete cds
          Length = 2385

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 422  cggggaaaagcacggtgggg 441
            ||||||||||||||||||||
Sbjct: 2198 cggggaaaagcacggtgggg 2179
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>emb|AL683878.9| Mouse DNA sequence from clone RP23-201G13 on chromosome 2, complete
              sequence
          Length = 195221

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 301    ggaggaggtcaggacaactt 320
              ||||||||||||||||||||
Sbjct: 179764 ggaggaggtcaggacaactt 179783
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>gb|L12694.1|CHKEN1A01 Gallus gallus engrailed protein (En-1) gene, 5' end
          Length = 688

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 105 ggaggcgggcgcggggctgg 124
           ||||||||||||||||||||
Sbjct: 135 ggaggcgggcgcggggctgg 116


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,212,921
Number of Sequences: 3902068
Number of extensions: 4212921
Number of successful extensions: 93829
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92036
Number of HSP's gapped (non-prelim): 1783
length of query: 565
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 542
effective length of database: 17,143,297,704
effective search space: 9291667355568
effective search space used: 9291667355568
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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