Clone Name | bart57b07 |
---|---|
Clone Library Name | barley_pub |
>gb|AY596540.1| Saccharum officinarum clone SCCCLR2001D07, complete sequence Length = 1804 Score = 611 bits (308), Expect = e-171 Identities = 395/424 (93%) Strand = Plus / Plus Query: 149 ccatgtgggccgcgtcgtgcctggcgtcctgctgcgccgcgtgcgcgtgcgaggcgtgcc 208 |||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 175 ccatgtgggcggcgtcgtgcctggcgtcgtgctgcgcggcgtgcgcgtgcgaggcgtgcc 234 Query: 209 gcaccgccgtcggcagcatcggccgccgctccgcgcggatcgcctactgcggcctcttcg 268 | || || |||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 235 ggacggcggtcggcagcatcggccgccgctccgcccgcatcgcctactgcggcctcttcg 294 Query: 269 cgctctccctcctcgcctcctgggtgctccgcgaggtcgccgcgccgctcctccagtcca 328 ||||||||||| |||| ||||||| ||||||||||||||||||||| ||||||||||| | Sbjct: 295 cgctctccctcttcgcatcctgggcgctccgcgaggtcgccgcgcccctcctccagtcaa 354 Query: 329 tcccatggatcaaccacttccacaagacgccggaccgcgagtggttcgagacggacgccg 388 |||||||||| ||||||||||||||||| || |||||||||||||||||||| ||||| | Sbjct: 355 tcccatggattaaccacttccacaagacccccgaccgcgagtggttcgagaccgacgcgg 414 Query: 389 tgctcagggtcagcctcggcaacttcctcttcttcaccatcctcgccgccatcatggccg 448 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 415 tgctcagggtcagcctcggcaacttcctcttcttcaccatcctcgccgtcatcatggccg 474 Query: 449 gcatcaaggaccagaaggacccgcgcgacaaggtccaccacggcggctggatggccaaga 508 | || ||||||||||||||||| || |||||| ||||||||||||| ||||||||||||| Sbjct: 475 ggataaaggaccagaaggacccccgtgacaagatccaccacggcgggtggatggccaaga 534 Query: 509 tcttctgctgggtcgtcatcgtcttcctcatgttcttcgttcccaacggcgtcgtcagct 568 |||||||||||| ||||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 535 tcttctgctgggccgtcatcgtcttcctgatgttcttcgtgcccaacggagtcgtcagct 594 Query: 569 tcta 572 |||| Sbjct: 595 tcta 598 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 8 ccgtcccctccccaacacgcgttcccca 35 |||||||||||||||||||||||||||| Sbjct: 12 ccgtcccctccccaacacgcgttcccca 39
>gb|AY105120.1| Zea mays PCO133097 mRNA sequence Length = 1778 Score = 611 bits (308), Expect = e-171 Identities = 395/424 (93%) Strand = Plus / Plus Query: 149 ccatgtgggccgcgtcgtgcctggcgtcctgctgcgccgcgtgcgcgtgcgaggcgtgcc 208 |||||||||| || |||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 224 ccatgtgggcggcatcgtgcctggcgtcgtgctgcgcggcgtgcgcgtgcgaggcgtgcc 283 Query: 209 gcaccgccgtcggcagcatcggccgccgctccgcgcggatcgcctactgcggcctcttcg 268 | || || |||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 284 ggacggcggtcggcagcatcggccgccgctccgcccgcatcgcctactgcggcctcttcg 343 Query: 269 cgctctccctcctcgcctcctgggtgctccgcgaggtcgccgcgccgctcctccagtcca 328 ||||||||||| |||| ||||||| ||||||||||||||||||||| ||||||||||| | Sbjct: 344 cgctctccctcttcgcatcctgggcgctccgcgaggtcgccgcgcccctcctccagtcga 403 Query: 329 tcccatggatcaaccacttccacaagacgccggaccgcgagtggttcgagacggacgccg 388 |||||||||| ||||||||||||||||| || |||||||||||||||||||| ||||| | Sbjct: 404 tcccatggattaaccacttccacaagacccccgaccgcgagtggttcgagaccgacgcgg 463 Query: 389 tgctcagggtcagcctcggcaacttcctcttcttcaccatcctcgccgccatcatggccg 448 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 464 tgctcagggtcagcctcggcaacttcctcttcttcaccatcctcgccgtcatcatggccg 523 Query: 449 gcatcaaggaccagaaggacccgcgcgacaaggtccaccacggcggctggatggccaaga 508 | || ||||||||||||||||| || |||||| ||||||||||||| ||||||||||||| Sbjct: 524 ggataaaggaccagaaggacccccgtgacaagatccaccacggcggatggatggccaaga 583 Query: 509 tcttctgctgggtcgtcatcgtcttcctcatgttcttcgttcccaacggcgtcgtcagct 568 |||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 584 tcttctgctgggtcatcatcgtcttcctcatgttcttcgtgcccaacggggtcgtcagct 643 Query: 569 tcta 572 |||| Sbjct: 644 tcta 647 Score = 40.1 bits (20), Expect = 7.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 8 ccgtcccctccccaacacgcgttcccca 35 |||||||||||| ||||||||||||||| Sbjct: 87 ccgtcccctccc-aacacgcgttcccca 113
>ref|XM_468227.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1587 Score = 597 bits (301), Expect = e-167 Identities = 394/425 (92%) Strand = Plus / Plus Query: 148 gccatgtgggccgcgtcgtgcctggcgtcctgctgcgccgcgtgcgcgtgcgaggcgtgc 207 ||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 108 gccatgtgggcggcgtcttgcctggcgtcgtgctgcgccgcgtgcgcgtgcgaggcgtgc 167 Query: 208 cgcaccgccgtcggcagcatcggccgccgctccgcgcggatcgcctactgcggcctcttc 267 || || || |||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 168 cgtacggcggtcggcagcatcggccgccgctccgcccgcatcgcctactgcggcctcttc 227 Query: 268 gcgctctccctcctcgcctcctgggtgctccgcgaggtcgccgcgccgctcctccagtcc 327 |||||||||||| |||||||||||| ||||||||||||||||||||| |||||||| ||| Sbjct: 228 gcgctctccctcttcgcctcctgggcgctccgcgaggtcgccgcgcccctcctccaatcc 287 Query: 328 atcccatggatcaaccacttccacaagacgccggaccgcgagtggttcgagacggacgcc 387 ||||||||||| |||||||||||||||||||| |||||||||||||||||||| || ||| Sbjct: 288 atcccatggattaaccacttccacaagacgcccgaccgcgagtggttcgagaccgatgcc 347 Query: 388 gtgctcagggtcagcctcggcaacttcctcttcttcaccatcctcgccgccatcatggcc 447 ||||| ||||| ||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 348 gtgcttagggttagcctcggcaacttcgtcttcttcaccatcctcgccatcatcatggct 407 Query: 448 ggcatcaaggaccagaaggacccgcgcgacaaggtccaccacggcggctggatggccaag 507 ||||||||||||||||||||||| ||||||||| | ||||| ||||| |||||||||||| Sbjct: 408 ggcatcaaggaccagaaggacccccgcgacaagatacaccatggcggatggatggccaag 467 Query: 508 atcttctgctgggtcgtcatcgtcttcctcatgttcttcgttcccaacggcgtcgtcagc 567 || ||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 468 atattctgctgggttgtcatcgtcttcctcatgttcttcgtgcccaacggcgtcgtaagc 527 Query: 568 ttcta 572 ||||| Sbjct: 528 ttcta 532
>ref|XM_507542.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1249_F12.26 mRNA Length = 1696 Score = 597 bits (301), Expect = e-167 Identities = 394/425 (92%) Strand = Plus / Plus Query: 148 gccatgtgggccgcgtcgtgcctggcgtcctgctgcgccgcgtgcgcgtgcgaggcgtgc 207 ||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 175 gccatgtgggcggcgtcttgcctggcgtcgtgctgcgccgcgtgcgcgtgcgaggcgtgc 234 Query: 208 cgcaccgccgtcggcagcatcggccgccgctccgcgcggatcgcctactgcggcctcttc 267 || || || |||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 235 cgtacggcggtcggcagcatcggccgccgctccgcccgcatcgcctactgcggcctcttc 294 Query: 268 gcgctctccctcctcgcctcctgggtgctccgcgaggtcgccgcgccgctcctccagtcc 327 |||||||||||| |||||||||||| ||||||||||||||||||||| |||||||| ||| Sbjct: 295 gcgctctccctcttcgcctcctgggcgctccgcgaggtcgccgcgcccctcctccaatcc 354 Query: 328 atcccatggatcaaccacttccacaagacgccggaccgcgagtggttcgagacggacgcc 387 ||||||||||| |||||||||||||||||||| |||||||||||||||||||| || ||| Sbjct: 355 atcccatggattaaccacttccacaagacgcccgaccgcgagtggttcgagaccgatgcc 414 Query: 388 gtgctcagggtcagcctcggcaacttcctcttcttcaccatcctcgccgccatcatggcc 447 ||||| ||||| ||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 415 gtgcttagggttagcctcggcaacttcgtcttcttcaccatcctcgccatcatcatggct 474 Query: 448 ggcatcaaggaccagaaggacccgcgcgacaaggtccaccacggcggctggatggccaag 507 ||||||||||||||||||||||| ||||||||| | ||||| ||||| |||||||||||| Sbjct: 475 ggcatcaaggaccagaaggacccccgcgacaagatacaccatggcggatggatggccaag 534 Query: 508 atcttctgctgggtcgtcatcgtcttcctcatgttcttcgttcccaacggcgtcgtcagc 567 || ||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 535 atattctgctgggttgtcatcgtcttcctcatgttcttcgtgcccaacggcgtcgtaagc 594 Query: 568 ttcta 572 ||||| Sbjct: 595 ttcta 599
>ref|XM_507541.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1249_F12.26 mRNA Length = 1696 Score = 597 bits (301), Expect = e-167 Identities = 394/425 (92%) Strand = Plus / Plus Query: 148 gccatgtgggccgcgtcgtgcctggcgtcctgctgcgccgcgtgcgcgtgcgaggcgtgc 207 ||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 175 gccatgtgggcggcgtcttgcctggcgtcgtgctgcgccgcgtgcgcgtgcgaggcgtgc 234 Query: 208 cgcaccgccgtcggcagcatcggccgccgctccgcgcggatcgcctactgcggcctcttc 267 || || || |||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 235 cgtacggcggtcggcagcatcggccgccgctccgcccgcatcgcctactgcggcctcttc 294 Query: 268 gcgctctccctcctcgcctcctgggtgctccgcgaggtcgccgcgccgctcctccagtcc 327 |||||||||||| |||||||||||| ||||||||||||||||||||| |||||||| ||| Sbjct: 295 gcgctctccctcttcgcctcctgggcgctccgcgaggtcgccgcgcccctcctccaatcc 354 Query: 328 atcccatggatcaaccacttccacaagacgccggaccgcgagtggttcgagacggacgcc 387 ||||||||||| |||||||||||||||||||| |||||||||||||||||||| || ||| Sbjct: 355 atcccatggattaaccacttccacaagacgcccgaccgcgagtggttcgagaccgatgcc 414 Query: 388 gtgctcagggtcagcctcggcaacttcctcttcttcaccatcctcgccgccatcatggcc 447 ||||| ||||| ||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 415 gtgcttagggttagcctcggcaacttcgtcttcttcaccatcctcgccatcatcatggct 474 Query: 448 ggcatcaaggaccagaaggacccgcgcgacaaggtccaccacggcggctggatggccaag 507 ||||||||||||||||||||||| ||||||||| | ||||| ||||| |||||||||||| Sbjct: 475 ggcatcaaggaccagaaggacccccgcgacaagatacaccatggcggatggatggccaag 534 Query: 508 atcttctgctgggtcgtcatcgtcttcctcatgttcttcgttcccaacggcgtcgtcagc 567 || ||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 535 atattctgctgggttgtcatcgtcttcctcatgttcttcgtgcccaacggcgtcgtaagc 594 Query: 568 ttcta 572 ||||| Sbjct: 595 ttcta 599
>ref|XM_507023.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1249_F12.26 mRNA Length = 1741 Score = 597 bits (301), Expect = e-167 Identities = 394/425 (92%) Strand = Plus / Plus Query: 148 gccatgtgggccgcgtcgtgcctggcgtcctgctgcgccgcgtgcgcgtgcgaggcgtgc 207 ||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 190 gccatgtgggcggcgtcttgcctggcgtcgtgctgcgccgcgtgcgcgtgcgaggcgtgc 249 Query: 208 cgcaccgccgtcggcagcatcggccgccgctccgcgcggatcgcctactgcggcctcttc 267 || || || |||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 250 cgtacggcggtcggcagcatcggccgccgctccgcccgcatcgcctactgcggcctcttc 309 Query: 268 gcgctctccctcctcgcctcctgggtgctccgcgaggtcgccgcgccgctcctccagtcc 327 |||||||||||| |||||||||||| ||||||||||||||||||||| |||||||| ||| Sbjct: 310 gcgctctccctcttcgcctcctgggcgctccgcgaggtcgccgcgcccctcctccaatcc 369 Query: 328 atcccatggatcaaccacttccacaagacgccggaccgcgagtggttcgagacggacgcc 387 ||||||||||| |||||||||||||||||||| |||||||||||||||||||| || ||| Sbjct: 370 atcccatggattaaccacttccacaagacgcccgaccgcgagtggttcgagaccgatgcc 429 Query: 388 gtgctcagggtcagcctcggcaacttcctcttcttcaccatcctcgccgccatcatggcc 447 ||||| ||||| ||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 430 gtgcttagggttagcctcggcaacttcgtcttcttcaccatcctcgccatcatcatggct 489 Query: 448 ggcatcaaggaccagaaggacccgcgcgacaaggtccaccacggcggctggatggccaag 507 ||||||||||||||||||||||| ||||||||| | ||||| ||||| |||||||||||| Sbjct: 490 ggcatcaaggaccagaaggacccccgcgacaagatacaccatggcggatggatggccaag 549 Query: 508 atcttctgctgggtcgtcatcgtcttcctcatgttcttcgttcccaacggcgtcgtcagc 567 || ||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 550 atattctgctgggttgtcatcgtcttcctcatgttcttcgtgcccaacggcgtcgtaagc 609 Query: 568 ttcta 572 ||||| Sbjct: 610 ttcta 614
>dbj|AK119191.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-H03, full insert sequence Length = 1587 Score = 597 bits (301), Expect = e-167 Identities = 394/425 (92%) Strand = Plus / Plus Query: 148 gccatgtgggccgcgtcgtgcctggcgtcctgctgcgccgcgtgcgcgtgcgaggcgtgc 207 ||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 108 gccatgtgggcggcgtcttgcctggcgtcgtgctgcgccgcgtgcgcgtgcgaggcgtgc 167 Query: 208 cgcaccgccgtcggcagcatcggccgccgctccgcgcggatcgcctactgcggcctcttc 267 || || || |||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 168 cgtacggcggtcggcagcatcggccgccgctccgcccgcatcgcctactgcggcctcttc 227 Query: 268 gcgctctccctcctcgcctcctgggtgctccgcgaggtcgccgcgccgctcctccagtcc 327 |||||||||||| |||||||||||| ||||||||||||||||||||| |||||||| ||| Sbjct: 228 gcgctctccctcttcgcctcctgggcgctccgcgaggtcgccgcgcccctcctccaatcc 287 Query: 328 atcccatggatcaaccacttccacaagacgccggaccgcgagtggttcgagacggacgcc 387 ||||||||||| |||||||||||||||||||| |||||||||||||||||||| || ||| Sbjct: 288 atcccatggattaaccacttccacaagacgcccgaccgcgagtggttcgagaccgatgcc 347 Query: 388 gtgctcagggtcagcctcggcaacttcctcttcttcaccatcctcgccgccatcatggcc 447 ||||| ||||| ||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 348 gtgcttagggttagcctcggcaacttcgtcttcttcaccatcctcgccatcatcatggct 407 Query: 448 ggcatcaaggaccagaaggacccgcgcgacaaggtccaccacggcggctggatggccaag 507 ||||||||||||||||||||||| ||||||||| | ||||| ||||| |||||||||||| Sbjct: 408 ggcatcaaggaccagaaggacccccgcgacaagatacaccatggcggatggatggccaag 467 Query: 508 atcttctgctgggtcgtcatcgtcttcctcatgttcttcgttcccaacggcgtcgtcagc 567 || ||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 468 atattctgctgggttgtcatcgtcttcctcatgttcttcgtgcccaacggcgtcgtaagc 527 Query: 568 ttcta 572 ||||| Sbjct: 528 ttcta 532
>dbj|AK106174.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-C06, full insert sequence Length = 1696 Score = 597 bits (301), Expect = e-167 Identities = 394/425 (92%) Strand = Plus / Plus Query: 148 gccatgtgggccgcgtcgtgcctggcgtcctgctgcgccgcgtgcgcgtgcgaggcgtgc 207 ||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 175 gccatgtgggcggcgtcttgcctggcgtcgtgctgcgccgcgtgcgcgtgcgaggcgtgc 234 Query: 208 cgcaccgccgtcggcagcatcggccgccgctccgcgcggatcgcctactgcggcctcttc 267 || || || |||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 235 cgtacggcggtcggcagcatcggccgccgctccgcccgcatcgcctactgcggcctcttc 294 Query: 268 gcgctctccctcctcgcctcctgggtgctccgcgaggtcgccgcgccgctcctccagtcc 327 |||||||||||| |||||||||||| ||||||||||||||||||||| |||||||| ||| Sbjct: 295 gcgctctccctcttcgcctcctgggcgctccgcgaggtcgccgcgcccctcctccaatcc 354 Query: 328 atcccatggatcaaccacttccacaagacgccggaccgcgagtggttcgagacggacgcc 387 ||||||||||| |||||||||||||||||||| |||||||||||||||||||| || ||| Sbjct: 355 atcccatggattaaccacttccacaagacgcccgaccgcgagtggttcgagaccgatgcc 414 Query: 388 gtgctcagggtcagcctcggcaacttcctcttcttcaccatcctcgccgccatcatggcc 447 ||||| ||||| ||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 415 gtgcttagggttagcctcggcaacttcgtcttcttcaccatcctcgccatcatcatggct 474 Query: 448 ggcatcaaggaccagaaggacccgcgcgacaaggtccaccacggcggctggatggccaag 507 ||||||||||||||||||||||| ||||||||| | ||||| ||||| |||||||||||| Sbjct: 475 ggcatcaaggaccagaaggacccccgcgacaagatacaccatggcggatggatggccaag 534 Query: 508 atcttctgctgggtcgtcatcgtcttcctcatgttcttcgttcccaacggcgtcgtcagc 567 || ||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 535 atattctgctgggttgtcatcgtcttcctcatgttcttcgtgcccaacggcgtcgtaagc 594 Query: 568 ttcta 572 ||||| Sbjct: 595 ttcta 599
>dbj|AK104731.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-C07, full insert sequence Length = 1696 Score = 597 bits (301), Expect = e-167 Identities = 394/425 (92%) Strand = Plus / Plus Query: 148 gccatgtgggccgcgtcgtgcctggcgtcctgctgcgccgcgtgcgcgtgcgaggcgtgc 207 ||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 175 gccatgtgggcggcgtcttgcctggcgtcgtgctgcgccgcgtgcgcgtgcgaggcgtgc 234 Query: 208 cgcaccgccgtcggcagcatcggccgccgctccgcgcggatcgcctactgcggcctcttc 267 || || || |||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 235 cgtacggcggtcggcagcatcggccgccgctccgcccgcatcgcctactgcggcctcttc 294 Query: 268 gcgctctccctcctcgcctcctgggtgctccgcgaggtcgccgcgccgctcctccagtcc 327 |||||||||||| |||||||||||| ||||||||||||||||||||| |||||||| ||| Sbjct: 295 gcgctctccctcttcgcctcctgggcgctccgcgaggtcgccgcgcccctcctccaatcc 354 Query: 328 atcccatggatcaaccacttccacaagacgccggaccgcgagtggttcgagacggacgcc 387 ||||||||||| |||||||||||||||||||| |||||||||||||||||||| || ||| Sbjct: 355 atcccatggattaaccacttccacaagacgcccgaccgcgagtggttcgagaccgatgcc 414 Query: 388 gtgctcagggtcagcctcggcaacttcctcttcttcaccatcctcgccgccatcatggcc 447 ||||| ||||| ||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 415 gtgcttagggttagcctcggcaacttcgtcttcttcaccatcctcgccatcatcatggct 474 Query: 448 ggcatcaaggaccagaaggacccgcgcgacaaggtccaccacggcggctggatggccaag 507 ||||||||||||||||||||||| ||||||||| | ||||| ||||| |||||||||||| Sbjct: 475 ggcatcaaggaccagaaggacccccgcgacaagatacaccatggcggatggatggccaag 534 Query: 508 atcttctgctgggtcgtcatcgtcttcctcatgttcttcgttcccaacggcgtcgtcagc 567 || ||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 535 atattctgctgggttgtcatcgtcttcctcatgttcttcgtgcccaacggcgtcgtaagc 594 Query: 568 ttcta 572 ||||| Sbjct: 595 ttcta 599
>dbj|AK068367.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013147C17, full insert sequence Length = 1742 Score = 597 bits (301), Expect = e-167 Identities = 394/425 (92%) Strand = Plus / Plus Query: 148 gccatgtgggccgcgtcgtgcctggcgtcctgctgcgccgcgtgcgcgtgcgaggcgtgc 207 ||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 190 gccatgtgggcggcgtcttgcctggcgtcgtgctgcgccgcgtgcgcgtgcgaggcgtgc 249 Query: 208 cgcaccgccgtcggcagcatcggccgccgctccgcgcggatcgcctactgcggcctcttc 267 || || || |||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 250 cgtacggcggtcggcagcatcggccgccgctccgcccgcatcgcctactgcggcctcttc 309 Query: 268 gcgctctccctcctcgcctcctgggtgctccgcgaggtcgccgcgccgctcctccagtcc 327 |||||||||||| |||||||||||| ||||||||||||||||||||| |||||||| ||| Sbjct: 310 gcgctctccctcttcgcctcctgggcgctccgcgaggtcgccgcgcccctcctccaatcc 369 Query: 328 atcccatggatcaaccacttccacaagacgccggaccgcgagtggttcgagacggacgcc 387 ||||||||||| |||||||||||||||||||| |||||||||||||||||||| || ||| Sbjct: 370 atcccatggattaaccacttccacaagacgcccgaccgcgagtggttcgagaccgatgcc 429 Query: 388 gtgctcagggtcagcctcggcaacttcctcttcttcaccatcctcgccgccatcatggcc 447 ||||| ||||| ||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 430 gtgcttagggttagcctcggcaacttcgtcttcttcaccatcctcgccatcatcatggct 489 Query: 448 ggcatcaaggaccagaaggacccgcgcgacaaggtccaccacggcggctggatggccaag 507 ||||||||||||||||||||||| ||||||||| | ||||| ||||| |||||||||||| Sbjct: 490 ggcatcaaggaccagaaggacccccgcgacaagatacaccatggcggatggatggccaag 549 Query: 508 atcttctgctgggtcgtcatcgtcttcctcatgttcttcgttcccaacggcgtcgtcagc 567 || ||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 550 atattctgctgggttgtcatcgtcttcctcatgttcttcgtgcccaacggcgtcgtaagc 609 Query: 568 ttcta 572 ||||| Sbjct: 610 ttcta 614
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 321 bits (162), Expect = 1e-84 Identities = 219/238 (92%) Strand = Plus / Minus Query: 335 ggatcaaccacttccacaagacgccggaccgcgagtggttcgagacggacgccgtgctca 394 |||| |||||||||||||||||||| |||||||||||||||||||| || |||||||| | Sbjct: 33712145 ggattaaccacttccacaagacgcccgaccgcgagtggttcgagaccgatgccgtgctta 33712086 Query: 395 gggtcagcctcggcaacttcctcttcttcaccatcctcgccgccatcatggccggcatca 454 |||| ||||||||||||||| |||||||||||||||||||| ||||||||| ||||||| Sbjct: 33712085 gggttagcctcggcaacttcgtcttcttcaccatcctcgccatcatcatggctggcatca 33712026 Query: 455 aggaccagaaggacccgcgcgacaaggtccaccacggcggctggatggccaagatcttct 514 |||||||||||||||| ||||||||| | ||||| ||||| |||||||||||||| |||| Sbjct: 33712025 aggaccagaaggacccccgcgacaagatacaccatggcggatggatggccaagatattct 33711966 Query: 515 gctgggtcgtcatcgtcttcctcatgttcttcgttcccaacggcgtcgtcagcttcta 572 ||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 33711965 gctgggttgtcatcgtcttcctcatgttcttcgtgcccaacggcgtcgtaagcttcta 33711908 Score = 278 bits (140), Expect = 2e-71 Identities = 176/188 (93%) Strand = Plus / Minus Query: 148 gccatgtgggccgcgtcgtgcctggcgtcctgctgcgccgcgtgcgcgtgcgaggcgtgc 207 ||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 33712439 gccatgtgggcggcgtcttgcctggcgtcgtgctgcgccgcgtgcgcgtgcgaggcgtgc 33712380 Query: 208 cgcaccgccgtcggcagcatcggccgccgctccgcgcggatcgcctactgcggcctcttc 267 || || || |||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 33712379 cgtacggcggtcggcagcatcggccgccgctccgcccgcatcgcctactgcggcctcttc 33712320 Query: 268 gcgctctccctcctcgcctcctgggtgctccgcgaggtcgccgcgccgctcctccagtcc 327 |||||||||||| |||||||||||| ||||||||||||||||||||| |||||||| ||| Sbjct: 33712319 gcgctctccctcttcgcctcctgggcgctccgcgaggtcgccgcgcccctcctccaatcc 33712260 Query: 328 atcccatg 335 |||||||| Sbjct: 33712259 atcccatg 33712252
>dbj|AP004054.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1249_F12 Length = 133205 Score = 321 bits (162), Expect = 1e-84 Identities = 219/238 (92%) Strand = Plus / Minus Query: 335 ggatcaaccacttccacaagacgccggaccgcgagtggttcgagacggacgccgtgctca 394 |||| |||||||||||||||||||| |||||||||||||||||||| || |||||||| | Sbjct: 80552 ggattaaccacttccacaagacgcccgaccgcgagtggttcgagaccgatgccgtgctta 80493 Query: 395 gggtcagcctcggcaacttcctcttcttcaccatcctcgccgccatcatggccggcatca 454 |||| ||||||||||||||| |||||||||||||||||||| ||||||||| ||||||| Sbjct: 80492 gggttagcctcggcaacttcgtcttcttcaccatcctcgccatcatcatggctggcatca 80433 Query: 455 aggaccagaaggacccgcgcgacaaggtccaccacggcggctggatggccaagatcttct 514 |||||||||||||||| ||||||||| | ||||| ||||| |||||||||||||| |||| Sbjct: 80432 aggaccagaaggacccccgcgacaagatacaccatggcggatggatggccaagatattct 80373 Query: 515 gctgggtcgtcatcgtcttcctcatgttcttcgttcccaacggcgtcgtcagcttcta 572 ||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 80372 gctgggttgtcatcgtcttcctcatgttcttcgtgcccaacggcgtcgtaagcttcta 80315 Score = 278 bits (140), Expect = 2e-71 Identities = 176/188 (93%) Strand = Plus / Minus Query: 148 gccatgtgggccgcgtcgtgcctggcgtcctgctgcgccgcgtgcgcgtgcgaggcgtgc 207 ||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 80846 gccatgtgggcggcgtcttgcctggcgtcgtgctgcgccgcgtgcgcgtgcgaggcgtgc 80787 Query: 208 cgcaccgccgtcggcagcatcggccgccgctccgcgcggatcgcctactgcggcctcttc 267 || || || |||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 80786 cgtacggcggtcggcagcatcggccgccgctccgcccgcatcgcctactgcggcctcttc 80727 Query: 268 gcgctctccctcctcgcctcctgggtgctccgcgaggtcgccgcgccgctcctccagtcc 327 |||||||||||| |||||||||||| ||||||||||||||||||||| |||||||| ||| Sbjct: 80726 gcgctctccctcttcgcctcctgggcgctccgcgaggtcgccgcgcccctcctccaatcc 80667 Query: 328 atcccatg 335 |||||||| Sbjct: 80666 atcccatg 80659
>dbj|AP005115.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0700F06 Length = 139277 Score = 321 bits (162), Expect = 1e-84 Identities = 219/238 (92%) Strand = Plus / Minus Query: 335 ggatcaaccacttccacaagacgccggaccgcgagtggttcgagacggacgccgtgctca 394 |||| |||||||||||||||||||| |||||||||||||||||||| || |||||||| | Sbjct: 43012 ggattaaccacttccacaagacgcccgaccgcgagtggttcgagaccgatgccgtgctta 42953 Query: 395 gggtcagcctcggcaacttcctcttcttcaccatcctcgccgccatcatggccggcatca 454 |||| ||||||||||||||| |||||||||||||||||||| ||||||||| ||||||| Sbjct: 42952 gggttagcctcggcaacttcgtcttcttcaccatcctcgccatcatcatggctggcatca 42893 Query: 455 aggaccagaaggacccgcgcgacaaggtccaccacggcggctggatggccaagatcttct 514 |||||||||||||||| ||||||||| | ||||| ||||| |||||||||||||| |||| Sbjct: 42892 aggaccagaaggacccccgcgacaagatacaccatggcggatggatggccaagatattct 42833 Query: 515 gctgggtcgtcatcgtcttcctcatgttcttcgttcccaacggcgtcgtcagcttcta 572 ||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 42832 gctgggttgtcatcgtcttcctcatgttcttcgtgcccaacggcgtcgtaagcttcta 42775 Score = 278 bits (140), Expect = 2e-71 Identities = 176/188 (93%) Strand = Plus / Minus Query: 148 gccatgtgggccgcgtcgtgcctggcgtcctgctgcgccgcgtgcgcgtgcgaggcgtgc 207 ||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 43306 gccatgtgggcggcgtcttgcctggcgtcgtgctgcgccgcgtgcgcgtgcgaggcgtgc 43247 Query: 208 cgcaccgccgtcggcagcatcggccgccgctccgcgcggatcgcctactgcggcctcttc 267 || || || |||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 43246 cgtacggcggtcggcagcatcggccgccgctccgcccgcatcgcctactgcggcctcttc 43187 Query: 268 gcgctctccctcctcgcctcctgggtgctccgcgaggtcgccgcgccgctcctccagtcc 327 |||||||||||| |||||||||||| ||||||||||||||||||||| |||||||| ||| Sbjct: 43186 gcgctctccctcttcgcctcctgggcgctccgcgaggtcgccgcgcccctcctccaatcc 43127 Query: 328 atcccatg 335 |||||||| Sbjct: 43126 atcccatg 43119
>gb|AC169374.2| Sorghum bicolor clone SB_BBc0019I06, complete sequence Length = 129695 Score = 69.9 bits (35), Expect = 9e-09 Identities = 77/91 (84%) Strand = Plus / Minus Query: 231 ccgccgctccgcgcggatcgcctactgcggcctcttcgcgctctccctcctcgcctcctg 290 ||||||||||||||| |||||||||||||||||||||| |||||| || ||||| Sbjct: 50861 ccgccgctccgcgcgcctcgcctactgcggcctcttcgccgcctcccttatcctctcctt 50802 Query: 291 ggtgctccgcgaggtcgccgcgccgctcctc 321 |||||||| || ||||||||||||||||| Sbjct: 50801 cttgctccgccagttcgccgcgccgctcctc 50771
>gb|BT018419.1| Zea mays clone EL01N0357G10.d mRNA sequence Length = 1376 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 231 ccgccgctccgcgcggatcgcctactgcggcctcttcgcgctctccctcctcgcctcctg 290 ||||||||||||||| |||| ||||||||||||||||| |||||| || ||||| Sbjct: 64 ccgccgctccgcgcgcctcgcttactgcggcctcttcgccgcctcccttatcctctcctt 123 Query: 291 ggtgctccgcgaggtcgccgcgccgctcctc 321 |||||||| || ||||||||||||||||| Sbjct: 124 cttgctccgccagttcgccgcgccgctcctc 154
>ref|XM_468965.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1254 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/40 (90%) Strand = Plus / Plus Query: 231 ccgccgctccgcgcggatcgcctactgcggcctcttcgcg 270 |||||||||||| || ||||||| ||||||||||||||| Sbjct: 81 ccgccgctccgctcgcctcgcctattgcggcctcttcgcg 120
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/40 (90%) Strand = Plus / Minus Query: 231 ccgccgctccgcgcggatcgcctactgcggcctcttcgcg 270 |||||||||||| || ||||||| ||||||||||||||| Sbjct: 19337500 ccgccgctccgctcgcctcgcctattgcggcctcttcgcg 19337461
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/40 (90%) Strand = Plus / Minus Query: 231 ccgccgctccgcgcggatcgcctactgcggcctcttcgcg 270 |||||||||||| || ||||||| ||||||||||||||| Sbjct: 19331541 ccgccgctccgctcgcctcgcctattgcggcctcttcgcg 19331502
>gb|AC137925.2| Oryza sativa chromosome 3 BAC OSJNBb0047D08 genomic sequence, complete sequence Length = 140507 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/40 (90%) Strand = Plus / Minus Query: 231 ccgccgctccgcgcggatcgcctactgcggcctcttcgcg 270 |||||||||||| || ||||||| ||||||||||||||| Sbjct: 121661 ccgccgctccgctcgcctcgcctattgcggcctcttcgcg 121622
>dbj|AK067011.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093K20, full insert sequence Length = 1494 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/40 (90%) Strand = Plus / Plus Query: 231 ccgccgctccgcgcggatcgcctactgcggcctcttcgcg 270 |||||||||||| || ||||||| ||||||||||||||| Sbjct: 120 ccgccgctccgctcgcctcgcctattgcggcctcttcgcg 159
>gb|DQ214369.1| Taeniopygia guttata clone 0058P0037C06 RIKEN cDNA 2900055D14-like mRNA, complete sequence Length = 774 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 524 tcatcgtcttcctcatgttcttc 546 ||||||||||||||||||||||| Sbjct: 218 tcatcgtcttcctcatgttcttc 240
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 173 cgtcctgctgcgccgcgtgcgc 194 |||||||||||||||||||||| Sbjct: 187529 cgtcctgctgcgccgcgtgcgc 187508
>gb|AY796340.1| Homo sapiens calpain 1, (mu/I) large subunit (CAPN1) gene, complete cds Length = 34135 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 29 ttccccacaaattcccctccac 50 |||||||||||||||||||||| Sbjct: 25101 ttccccacaaattcccctccac 25122
>gb|AC147679.13| Canis Familiaris, clone XX-10F3, complete sequence Length = 193944 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 411 cttcctcttcttcaccatcctc 432 |||||||||||||||||||||| Sbjct: 82425 cttcctcttcttcaccatcctc 82404
>ref|XM_381906.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01730.1) partial mRNA Length = 1086 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 537 catgttcttcgttcccaacggc 558 |||||||||||||||||||||| Sbjct: 203 catgttcttcgttcccaacggc 182
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 294 gctccgcgaggtcgccgcgccg 315 |||||||||||||||||||||| Sbjct: 2829767 gctccgcgaggtcgccgcgccg 2829746
>dbj|AP003068.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-399J13, complete sequence Length = 187934 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 29 ttccccacaaattcccctccac 50 |||||||||||||||||||||| Sbjct: 165032 ttccccacaaattcccctccac 165053
>dbj|AP000828.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-730K20, complete sequence Length = 61993 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 29 ttccccacaaattcccctccac 50 |||||||||||||||||||||| Sbjct: 5719 ttccccacaaattcccctccac 5740
>ref|XM_324401.1| Neurospora crassa OR74A hypothetical protein (NCU05045.1) partial mRNA Length = 1560 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 402 cctcggcaacttcctcttcttcaccatcctcgccgcc 438 |||| ||| ||||||| ||||||||||||||||||| Sbjct: 1521 cctctgcaccttcctcgccttcaccatcctcgccgcc 1485
>ref|XM_951260.1| Neurospora crassa OR74A hypothetical protein (NCU05045.1) partial mRNA Length = 1560 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 402 cctcggcaacttcctcttcttcaccatcctcgccgcc 438 |||| ||| ||||||| ||||||||||||||||||| Sbjct: 1521 cctctgcaccttcctcgccttcaccatcctcgccgcc 1485
>gb|AY558574.1| Saccharomyces cerevisiae clone FLH001790.01X YDR171W gene, complete cds Length = 1128 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 413 tcctcttcttcaccatcctcg 433 ||||||||||||||||||||| Sbjct: 284 tcctcttcttcaccatcctcg 264
>ref|XM_783345.1| PREDICTED: Strongylocentrotus purpuratus similar to serologically defined colon cancer antigen 10 (LOC583439), mRNA Length = 1440 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 413 tcctcttcttcaccatcctcg 433 ||||||||||||||||||||| Sbjct: 815 tcctcttcttcaccatcctcg 795
>emb|Z46727.1|SC9395 S.cerevisiae chromosome IV cosmid 9395 Length = 39334 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 413 tcctcttcttcaccatcctcg 433 ||||||||||||||||||||| Sbjct: 6309 tcctcttcttcaccatcctcg 6289
>emb|BX571864.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment 6/17 Length = 349071 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 116 actgatcgccgccggagaaga 136 ||||||||||||||||||||| Sbjct: 274514 actgatcgccgccggagaaga 274494
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 292 gtgctccgcgaggtcgccgcg 312 ||||||||||||||||||||| Sbjct: 4750288 gtgctccgcgaggtcgccgcg 4750308
>dbj|AB116380.1| Lethenteron japonicum bi-uv mRNA for bistable UV pigment, complete cds Length = 1109 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 420 cttcaccatcctcgccgccatcatggccg 448 ||||||||||||||||| |||||||||| Sbjct: 128 cttcaccatcctcgccgtgatcatggccg 156
>gb|U41401.1|SCU41401 Saccharomyces cerevisiae class 1 heat shock protein Hsp42p (HSP42) gene, complete cds Length = 1744 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 413 tcctcttcttcaccatcctcg 433 ||||||||||||||||||||| Sbjct: 852 tcctcttcttcaccatcctcg 832
>ref|XM_642459.1| Dictyostelium discoideum hypothetical protein (DDB0189776), partial mRNA Length = 5586 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 tcctcttcttcaccatcctc 432 |||||||||||||||||||| Sbjct: 3122 tcctcttcttcaccatcctc 3103
>ref|XM_481770.1| Oryza sativa (japonica cultivar-group), mRNA Length = 450 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 gccgccggagaagagaaggg 142 |||||||||||||||||||| Sbjct: 296 gccgccggagaagagaaggg 315
>ref|XM_520142.1| PREDICTED: Pan troglodytes similar to Acidic leucine-rich nuclear phosphoprotein 32 family member B (PHAPI2 protein) (Silver-stainable protein SSP29) (Acidic protein rich in leucines) (LOC464605), mRNA Length = 995 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 tcctcttcttcaccatcctc 432 |||||||||||||||||||| Sbjct: 767 tcctcttcttcaccatcctc 748
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 cctgctgcgccgcgtgcgcg 195 |||||||||||||||||||| Sbjct: 2455462 cctgctgcgccgcgtgcgcg 2455443
>ref|XM_324227.1| Neurospora crassa OR74A hypothetical protein (NCU04871.1) partial mRNA Length = 6126 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 aaccacttccacaagacgcc 359 |||||||||||||||||||| Sbjct: 857 aaccacttccacaagacgcc 876
>ref|XM_954035.1| Neurospora crassa OR74A hypothetical protein (NCU04871.1) partial mRNA Length = 6126 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 aaccacttccacaagacgcc 359 |||||||||||||||||||| Sbjct: 857 aaccacttccacaagacgcc 876
>gb|BC013003.2| Homo sapiens acidic (leucine-rich) nuclear phosphoprotein 32 family, member B, mRNA (cDNA clone MGC:3861 IMAGE:3010189), complete cds Length = 1026 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 tcctcttcttcaccatcctc 432 |||||||||||||||||||| Sbjct: 747 tcctcttcttcaccatcctc 728
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 cctgctgcgccgcgtgcgcg 195 |||||||||||||||||||| Sbjct: 3729147 cctgctgcgccgcgtgcgcg 3729166
>emb|AL591790.1|SME591790 Sinorhizobium meliloti 1021 complete chromosome; segment 9/12 Length = 323450 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 agcatcggccgccgctccgc 242 |||||||||||||||||||| Sbjct: 293535 agcatcggccgccgctccgc 293516
>gb|AC144759.11| Medicago truncatula clone mth2-15b21, complete sequence Length = 124666 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 tcctcttcttcaccatcctc 432 |||||||||||||||||||| Sbjct: 21504 tcctcttcttcaccatcctc 21523
>gb|AC123596.13| Medicago truncatula clone mth1-17n5, complete sequence Length = 120055 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 tcctcttcttcaccatcctc 432 |||||||||||||||||||| Sbjct: 18847 tcctcttcttcaccatcctc 18866
>gb|BC072005.1| Homo sapiens cDNA clone IMAGE:3356831, **** WARNING: chimeric clone **** Length = 1650 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 tcctcttcttcaccatcctc 432 |||||||||||||||||||| Sbjct: 1030 tcctcttcttcaccatcctc 1011
>gb|BC008762.1| Homo sapiens mRNA similar to RIKEN cDNA 0610033L19 gene (cDNA clone IMAGE:3349806) Length = 3768 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 tcctcttcttcaccatcctc 432 |||||||||||||||||||| Sbjct: 3179 tcctcttcttcaccatcctc 3160
>ref|NM_006401.1| Homo sapiens acidic (leucine-rich) nuclear phosphoprotein 32 family, member B (ANP32B), mRNA Length = 1475 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 tcctcttcttcaccatcctc 432 |||||||||||||||||||| Sbjct: 776 tcctcttcttcaccatcctc 757
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 cctgctgcgccgcgtgcgcg 195 |||||||||||||||||||| Sbjct: 4302394 cctgctgcgccgcgtgcgcg 4302375
>emb|AL359259.18| Human DNA sequence from clone RP11-182B22 on chromosome 1 Contains the 3' end of the MTR gene for 5-methyltetrahydrofolate-homocysteine methyltransferase, a novel gene (LOC149448), a ribosomal protein L35 (RPL35) pseudogene, and a novel gene similar to metallothionein 1H (MT1H), complete sequence Length = 172753 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 cttcctcttcttcaccatcc 430 |||||||||||||||||||| Sbjct: 149166 cttcctcttcttcaccatcc 149185
>emb|AL354726.17| Human DNA sequence from clone RP11-535C21 on chromosome 9 Contains 5' end of HEMGN gene for hemogen, the ANP32B gene for acidic (leucine-rich) nuclear phosphoprotein 32 family, member B and a CpG island, complete sequence Length = 82316 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 tcctcttcttcaccatcctc 432 |||||||||||||||||||| Sbjct: 70807 tcctcttcttcaccatcctc 70788
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 cctgctgcgccgcgtgcgcg 195 |||||||||||||||||||| Sbjct: 526314 cctgctgcgccgcgtgcgcg 526295
>emb|AL022314.1|HS1170K4 Human DNA sequence from clone RP5-1170K4 on chromosome 22q12.2-13.1, complete sequence Length = 104353 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 tcctccagtccatcccatgg 336 |||||||||||||||||||| Sbjct: 17127 tcctccagtccatcccatgg 17146
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 cctgctgcgccgcgtgcgcg 195 |||||||||||||||||||| Sbjct: 3469466 cctgctgcgccgcgtgcgcg 3469485
>emb|BX538007.1|HSM806146 Homo sapiens genomic DNA; cDNA DKFZp686I1240 (from clone DKFZp686I1240) Length = 3196 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 tcctccagtccatcccatgg 336 |||||||||||||||||||| Sbjct: 158 tcctccagtccatcccatgg 177
>gb|AC036196.10| Homo sapiens chromosome 15, clone RP11-599A21, complete sequence Length = 180366 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 tcctcttcttcaccatcctc 432 |||||||||||||||||||| Sbjct: 65341 tcctcttcttcaccatcctc 65360
>emb|CR595726.1| full-length cDNA clone CS0DJ012YF08 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1082 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 tcctcttcttcaccatcctc 432 |||||||||||||||||||| Sbjct: 543 tcctcttcttcaccatcctc 524
>gb|AC068870.17| Homo sapiens chromosome , clone RP11-775C24, complete sequence Length = 194237 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 tcctcttcttcaccatcctc 432 |||||||||||||||||||| Sbjct: 174303 tcctcttcttcaccatcctc 174322
>gb|DP000059.1| Carollia perspicillata target 117 genomic scaffold Length = 359132 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ctctgccgtcccctccccaa 22 |||||||||||||||||||| Sbjct: 147786 ctctgccgtcccctccccaa 147767
>dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102 Length = 1779707 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 caaatcgaaccccagcggcg 80 |||||||||||||||||||| Sbjct: 789883 caaatcgaaccccagcggcg 789902
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 551 ccaacggcgtcgtcagcttc 570 |||||||||||||||||||| Sbjct: 3344792 ccaacggcgtcgtcagcttc 3344773
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 gccgccggagaagagaaggg 142 |||||||||||||||||||| Sbjct: 15393997 gccgccggagaagagaaggg 15394016 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 cggcgtcgcgcgagctcccc 95 |||||||||||||||||||| Sbjct: 4679104 cggcgtcgcgcgagctcccc 4679085
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 ggccgccgccatgtgggccgcgtc 164 ||||||||||||||||||| |||| Sbjct: 1172665 ggccgccgccatgtgggccccgtc 1172688
>dbj|AK223454.1| Homo sapiens mRNA for acidic (leucine-rich) nuclear phosphoprotein 32 family, member B variant, clone: FCC114H04 Length = 1098 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 tcctcttcttcaccatcctc 432 |||||||||||||||||||| Sbjct: 782 tcctcttcttcaccatcctc 763
>gb|AF030227.1|HSVAVPOG27 Homo sapiens vav proto-oncogene, exon 27, and complete cds Length = 317 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 cgctcctccagtccatccca 333 |||||||||||||||||||| Sbjct: 187 cgctcctccagtccatccca 168
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 ccgccgtcggcagcatcggc 231 |||||||||||||||||||| Sbjct: 4826355 ccgccgtcggcagcatcggc 4826374
>dbj|AP005165.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0057M23 Length = 168029 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 ggccgccgccatgtgggccgcgtc 164 ||||||||||||||||||| |||| Sbjct: 74272 ggccgccgccatgtgggccccgtc 74295
>dbj|AP004692.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0455A11 Length = 158629 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 cggcgtcgcgcgagctcccc 95 |||||||||||||||||||| Sbjct: 37120 cggcgtcgcgcgagctcccc 37101
>dbj|AP004553.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1790_D02 Length = 162928 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 gccgccggagaagagaaggg 142 |||||||||||||||||||| Sbjct: 79573 gccgccggagaagagaaggg 79592
>dbj|AK072227.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013168G19, full insert sequence Length = 2470 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 cggcgtcgcgcgagctcccc 95 |||||||||||||||||||| Sbjct: 191 cggcgtcgcgcgagctcccc 172
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 cctgctgcgccgcgtgcgcg 195 |||||||||||||||||||| Sbjct: 534617 cctgctgcgccgcgtgcgcg 534598
>gb|AC124744.3| Mus musculus BAC clone RP23-223E16 from 13, complete sequence Length = 199767 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 412 ttcctcttcttcaccatcctcgcc 435 ||||||||| |||||||||||||| Sbjct: 111831 ttcctcttcctcaccatcctcgcc 111854
>gb|U70439.1|HSU70439 Human silver-stainable protein SSP29 mRNA, complete cds Length = 1475 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 tcctcttcttcaccatcctc 432 |||||||||||||||||||| Sbjct: 776 tcctcttcttcaccatcctc 757
>gb|DQ056292.1| Soochong virus-1 isolate SC-1 putative polymerase mRNA, complete cds Length = 6533 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 495 ctggatggccaagatcttct 514 |||||||||||||||||||| Sbjct: 2845 ctggatggccaagatcttct 2826
>gb|AY675354.1| Soochong virus-2 isolate SC-2 putative polymerase mRNA, complete cds Length = 6533 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 495 ctggatggccaagatcttct 514 |||||||||||||||||||| Sbjct: 2845 ctggatggccaagatcttct 2826
>ref|NM_005428.2| Homo sapiens vav 1 oncogene (VAV1), mRNA Length = 2888 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 cgctcctccagtccatccca 333 |||||||||||||||||||| Sbjct: 2758 cgctcctccagtccatccca 2739
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 cctgctgcgccgcgtgcgcg 195 |||||||||||||||||||| Sbjct: 1393392 cctgctgcgccgcgtgcgcg 1393373
>emb|CT025839.2| Medicago truncatula chromosome 5 clone mth4-19c21, COMPLETE SEQUENCE Length = 210117 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 tcctcttcttcaccatcctc 432 |||||||||||||||||||| Sbjct: 21510 tcctcttcttcaccatcctc 21529
>emb|AL954173.8| Zebrafish DNA sequence from clone CH211-272N13, complete sequence Length = 154587 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 tcctcttcttcaccatcctc 432 |||||||||||||||||||| Sbjct: 135061 tcctcttcttcaccatcctc 135080
>gb|BC019658.1| Homo sapiens acidic (leucine-rich) nuclear phosphoprotein 32 family, member B, mRNA (cDNA clone MGC:25053 IMAGE:4478860), complete cds Length = 1371 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 tcctcttcttcaccatcctc 432 |||||||||||||||||||| Sbjct: 754 tcctcttcttcaccatcctc 735
>emb|Y07570.1|HSPHAPI2B H.sapiens mRNA for PHAPI2b protein Length = 1293 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 tcctcttcttcaccatcctc 432 |||||||||||||||||||| Sbjct: 750 tcctcttcttcaccatcctc 731
>emb|Y07569.1|HSPHAPI2A H.sapiens mRNA for PHAPI2a protein Length = 1011 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 tcctcttcttcaccatcctc 432 |||||||||||||||||||| Sbjct: 621 tcctcttcttcaccatcctc 602
>emb|Y07969.1|HSAPRIL H.sapiens mRNA for APRIL protein Length = 1371 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 tcctcttcttcaccatcctc 432 |||||||||||||||||||| Sbjct: 790 tcctcttcttcaccatcctc 771
>dbj|AB004793.1| Xenopus laevis mRNA for DUF87, complete cds Length = 2374 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 tcggcaacttcctcttcttc 423 |||||||||||||||||||| Sbjct: 1547 tcggcaacttcctcttcttc 1528 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,276,018 Number of Sequences: 3902068 Number of extensions: 4276018 Number of successful extensions: 113782 Number of sequences better than 10.0: 87 Number of HSP's better than 10.0 without gapping: 88 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 110863 Number of HSP's gapped (non-prelim): 2919 length of query: 572 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 549 effective length of database: 17,143,297,704 effective search space: 9411670439496 effective search space used: 9411670439496 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)