ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart57b06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_470186.1| Oryza sativa (japonica cultivar-group), predic... 202 7e-49
2dbj|AK065483.1| Oryza sativa (japonica cultivar-group) cDNA clon... 202 7e-49
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 127 3e-26
4dbj|AP004078.3| Oryza sativa (japonica cultivar-group) genomic D... 127 3e-26
5gb|AC140005.2| Oryza sativa (japonica cultivar-group) chromosome... 101 2e-18
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 101 2e-18
7gb|AC098693.2| Oryza sativa (japonica cultivar-group) chromosome... 101 2e-18
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
9ref|NM_190040.1| Oryza sativa (japonica cultivar-group), predic... 44 0.37
10gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 44 0.37
11dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.37
12dbj|AP003246.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.37
13dbj|AK072525.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.37
14dbj|AK060679.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.37
15gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 42 1.4
16ref|NM_106221.1| Arabidopsis thaliana unknown protein AT1G75700 ... 42 1.4
17ref|XM_475722.1| Oryza sativa (japonica cultivar-group), predic... 42 1.4
18ref|XM_474352.1| Oryza sativa (japonica cultivar-group), predic... 42 1.4
19ref|NM_189931.1| Oryza sativa (japonica cultivar-group), predic... 42 1.4
20gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
21emb|AL606668.2|OSJN00083 Oryza sativa genomic DNA, chromosome 4,... 42 1.4
22dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
23dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
24dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
25dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
26gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.4
27gb|AC006434.5|AC006434 Genomic sequence for Arabidopsis thaliana... 42 1.4
28dbj|AP003433.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
29dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 1.4
30dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 1.4
31dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
32dbj|AK121863.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
33dbj|AK107178.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
34dbj|AK100001.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
35dbj|AK071387.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
36dbj|AK059971.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
37emb|AL732349.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 42 1.4
38gb|AF081810.1|AF081810 Lymantria dispar nucleopolyhedrovirus, co... 42 1.4
39gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
40emb|AL928753.3|CNS08CBQ Oryza sativa chromosome 12, . BAC OSJNBb... 42 1.4
41gb|AF386526.1| Shigella flexneri 2a str. 301 virulence plasmid p... 40 5.7
42gb|AC151776.1| Ornithorhynchus anatinus chromosome UNK clone OAB... 40 5.7
43ref|XM_550071.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.7
44ref|NM_190780.1| Oryza sativa (japonica cultivar-group), predic... 40 5.7
45ref|NM_191064.1| Oryza sativa (japonica cultivar-group), predic... 40 5.7
46ref|NM_193374.1| Oryza sativa (japonica cultivar-group), predic... 40 5.7
47ref|XM_516046.1| PREDICTED: Pan troglodytes similar to hypotheti... 40 5.7
48ref|XM_479183.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.7
49ref|XM_473839.1| Oryza sativa (japonica cultivar-group), predic... 40 5.7
50gb|AF550679.1| Escherichia coli plasmid p1658/97, complete sequence 40 5.7
51gb|U01159.2| Escherichia coli F sex factor transfer region 40 5.7
52gb|AY458016.1| Escherichia coli plasmid pC15-1a, complete sequence 40 5.7
53ref|NM_015906.3| Homo sapiens tripartite motif-containing 33 (TR... 40 5.7
54ref|NM_033020.2| Homo sapiens tripartite motif-containing 33 (TR... 40 5.7
55gb|CP000051.1| Chlamydia trachomatis A/HAR-13, complete genome 40 5.7
56gb|AY272055.2| Chlamydomonas reinhardtii chlamyopsin-5 gene, com... 40 5.7
57gb|AY206447.1| Shigella flexneri plasmid pINV_F6_M1382 TrbH (trb... 40 5.7
58gb|CP000244.1| Escherichia coli UTI89 plasmid pUTI89, complete s... 40 5.7
59emb|X66126.1|CTMIPL2 C.trachomatis (L2) gene for mip-like protein 40 5.7
60emb|Z98950.1|HS507I15 Human DNA sequence from clone RP3-507I15 o... 40 5.7
61emb|AL390241.19| Human DNA sequence from clone RP11-343L14 on ch... 40 5.7
62emb|AL050308.9|HSG164F24 Human DNA sequence from clone GS1-164F2... 40 5.7
63gb|AC175117.2| Mus musculus chromosome 3, clone wi1-709N8, compl... 40 5.7
64emb|X66128.1|CTMIPB C.trachomatis (B) gene for mip-like protein 40 5.7
65emb|X66127.1|CTMIPE C.trachomatis (E) gene for mip-like protein 40 5.7
66emb|X55815.1|ECR100TRA Plasmid R100 promoter-distal region of th... 40 5.7
67emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete ... 40 5.7
68emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete ... 40 5.7
69emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete ... 40 5.7
70emb|AL606691.4|OSJN00081 Oryza sativa genomic DNA, chromosome 4,... 40 5.7
71emb|AL606684.3|OSJN00088 Oryza sativa genomic DNA, chromosome 4,... 40 5.7
72emb|AL391753.1|SFPWR100 Shigella flexneri virulence plasmid pWR1... 40 5.7
73dbj|AP003570.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
74gb|AY119024.1| Drosophila melanogaster LP05023 full insert cDNA 40 5.7
75dbj|AP001918.1| Plasmid F genomic DNA, complete sequence 40 5.7
76gb|AC104428.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.7
77ref|NM_078670.2| Drosophila melanogaster Dynein heavy chain at 1... 40 5.7
78gb|DQ381420.1| Escherichia coli plasmid pAPEC-O1-ColBM, complete... 40 5.7
79gb|AC011614.8| Drosophila melanogaster, chromosome X, region 16F... 40 5.7
80gb|AF348706.1|AF348706 Shigella flexneri large virulence plasmid... 40 5.7
81gb|AC012163.13|AC012163 Drosophila melanogaster, chromosome X, r... 40 5.7
82dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
83gb|U82621.1|SFU82621 Shigella flexneri plasmid pMYSH6000, MsbB h... 40 5.7
84dbj|AP004614.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
85dbj|AP004331.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
86ref|XM_342524.2| PREDICTED: Rattus norvegicus phospholipase C, b... 40 5.7
87dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
88dbj|AP003235.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
89gb|AE001273.1| Chlamydia trachomatis D/UW-3/CX, complete genome 40 5.7
90dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
91dbj|AP004299.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
92dbj|AP003247.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
93dbj|AP002913.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
94dbj|AK099524.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.7
95dbj|AK099060.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.7
96dbj|AK098894.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.7
97dbj|AK098852.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.7
98dbj|AK071382.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.7
99dbj|AK065080.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.7
100emb|AL442105.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 5.7
101gb|L14323.2|RATPHOSPHB Rattus norvegicus phospholipase C-beta1b ... 40 5.7
102gb|AE003507.3| Drosophila melanogaster chromosome X, section 59 ... 40 5.7
103gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 5.7
104gb|AY879342.1| Shigella flexneri plasmid pSF5, complete sequence 40 5.7
105gb|M54796.1|FPLTRAID Plasmid F (from E.coli) helicase I (traI) g... 40 5.7
106emb|AL840635.6| Mouse DNA sequence from clone RP23-418D21 on chr... 40 5.7
107gb|CP000037.1| Shigella boydii Sb227 plasmid pSB4_227, complete ... 40 5.7
108gb|M20636.1|RATPLC1A Rat phospholipase C-1 mRNA, complete cds 40 5.7
109gb|CP000039.1| Shigella sonnei Ss046 plasmid pSS_046, complete s... 40 5.7
110dbj|AP000342.1| Plasmid R100 DNA, complete sequence 40 5.7 
>ref|XM_470186.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1377

 Score =  202 bits (102), Expect = 7e-49
 Identities = 189/218 (86%)
 Strand = Plus / Plus

                                                                       
Query: 201 tcattcattaccagagctttaatacttgttcttggatatgcatatccggcttatgattgt 260
           |||||||||||  | |||||||| ||| |||||||||||||||| || || |||||||| 
Sbjct: 10  tcattcattactggggctttaatgcttattcttggatatgcatacccagcctatgattgc 69

                                                                       
Query: 261 tacaagacagtggagctgaataggcctgagattgagcagttgcggctctggtgtcagtac 320
           |||||||| ||||| ||||| | ||||||||| ||| |||||||| ||||||||||||||
Sbjct: 70  tacaagacggtggaactgaacaagcctgagatcgagaagttgcggttctggtgtcagtac 129

                                                                       
Query: 321 tggattttacttgcaatgcttactgttttcgaaagaattggggataatttcatatcttgg 380
           ||||||||||||||  | || |||||||| || ||| |||||||||||||  |||| |||
Sbjct: 130 tggattttacttgctgttctaactgtttttgatagagttggggataattttgtatcatgg 189

                                                 
Query: 381 ttgccaatgtatagtgaagcaaagctggcttttatcgt 418
           ||||||||||| ||||||||||||||||| ||| ||||
Sbjct: 190 ttgccaatgtacagtgaagcaaagctggcatttgtcgt 227
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>dbj|AK065483.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013008G03, full
           insert sequence
          Length = 1531

 Score =  202 bits (102), Expect = 7e-49
 Identities = 189/218 (86%)
 Strand = Plus / Plus

                                                                       
Query: 201 tcattcattaccagagctttaatacttgttcttggatatgcatatccggcttatgattgt 260
           |||||||||||  | |||||||| ||| |||||||||||||||| || || |||||||| 
Sbjct: 262 tcattcattactggggctttaatgcttattcttggatatgcatacccagcctatgattgc 321

                                                                       
Query: 261 tacaagacagtggagctgaataggcctgagattgagcagttgcggctctggtgtcagtac 320
           |||||||| ||||| ||||| | ||||||||| ||| |||||||| ||||||||||||||
Sbjct: 322 tacaagacggtggaactgaacaagcctgagatcgagaagttgcggttctggtgtcagtac 381

                                                                       
Query: 321 tggattttacttgcaatgcttactgttttcgaaagaattggggataatttcatatcttgg 380
           ||||||||||||||  | || |||||||| || ||| |||||||||||||  |||| |||
Sbjct: 382 tggattttacttgctgttctaactgtttttgatagagttggggataattttgtatcatgg 441

                                                 
Query: 381 ttgccaatgtatagtgaagcaaagctggcttttatcgt 418
           ||||||||||| ||||||||||||||||| ||| ||||
Sbjct: 442 ttgccaatgtacagtgaagcaaagctggcatttgtcgt 479
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  127 bits (64), Expect = 3e-26
 Identities = 91/100 (91%)
 Strand = Plus / Plus

                                                                           
Query: 224     acttgttcttggatatgcatatccggcttatgattgttacaagacagtggagctgaatag 283
               |||| |||||||||||||||| || || |||||||| |||||||||||||||||||| ||
Sbjct: 1135718 acttattcttggatatgcatacccagcctatgattgctacaagacagtggagctgaacag 1135777

                                                       
Query: 284     gcctgagattgagcagttgcggctctggtgtcagtactgg 323
                |||||| |||||||||||||| |||||||||||||||||
Sbjct: 1135778 acctgaggttgagcagttgcggttctggtgtcagtactgg 1135817



 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                          
Query: 379     ggttgccaatgtatagtgaagcaaagctggcttttatcgtgta 421
               |||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 1136052 ggttaccaatgtatagtgaagcaaagctggcatttatcgtgta 1136094



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                                
Query: 322     ggattttacttgcaatgcttactgttttcgaaagaattggggataattt 370
               |||||||||| ||| | || |||||||| || ||| |||||||||||||
Sbjct: 1135903 ggattttactagcagttctaactgtttttgagagagttggggataattt 1135951
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>dbj|AP004078.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1020_C02
          Length = 124578

 Score =  127 bits (64), Expect = 3e-26
 Identities = 91/100 (91%)
 Strand = Plus / Plus

                                                                         
Query: 224   acttgttcttggatatgcatatccggcttatgattgttacaagacagtggagctgaatag 283
             |||| |||||||||||||||| || || |||||||| |||||||||||||||||||| ||
Sbjct: 88242 acttattcttggatatgcatacccagcctatgattgctacaagacagtggagctgaacag 88301

                                                     
Query: 284   gcctgagattgagcagttgcggctctggtgtcagtactgg 323
              |||||| |||||||||||||| |||||||||||||||||
Sbjct: 88302 acctgaggttgagcagttgcggttctggtgtcagtactgg 88341



 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                        
Query: 379   ggttgccaatgtatagtgaagcaaagctggcttttatcgtgta 421
             |||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 88576 ggttaccaatgtatagtgaagcaaagctggcatttatcgtgta 88618



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                              
Query: 322   ggattttacttgcaatgcttactgttttcgaaagaattggggataattt 370
             |||||||||| ||| | || |||||||| || ||| |||||||||||||
Sbjct: 88427 ggattttactagcagttctaactgtttttgagagagttggggataattt 88475
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>gb|AC140005.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1004C08,
             complete sequence
          Length = 138054

 Score =  101 bits (51), Expect = 2e-18
 Identities = 84/95 (88%)
 Strand = Plus / Minus

                                                                         
Query: 229   ttcttggatatgcatatccggcttatgattgttacaagacagtggagctgaataggcctg 288
             |||||||||||||||| || || |||||||| |||||||| ||||| ||||| | |||||
Sbjct: 43956 ttcttggatatgcatacccagcctatgattgctacaagacggtggaactgaacaagcctg 43897

                                                
Query: 289   agattgagcagttgcggctctggtgtcagtactgg 323
             |||| ||| |||||||| |||||||||||||||||
Sbjct: 43896 agatcgagaagttgcggttctggtgtcagtactgg 43862



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                     
Query: 379   ggttgccaatgtatagtgaagcaaagctggcttttatcgt 418
             ||||||||||||| ||||||||||||||||| ||| ||||
Sbjct: 43622 ggttgccaatgtacagtgaagcaaagctggcatttgtcgt 43583



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                              
Query: 322   ggattttacttgcaatgcttactgttttcgaaagaattggggataattt 370
             |||||||||||||  | || |||||||| || ||| |||||||||||||
Sbjct: 43772 ggattttacttgctgttctaactgtttttgatagagttggggataattt 43724
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  101 bits (51), Expect = 2e-18
 Identities = 84/95 (88%)
 Strand = Plus / Minus

                                                                           
Query: 229     ttcttggatatgcatatccggcttatgattgttacaagacagtggagctgaataggcctg 288
               |||||||||||||||| || || |||||||| |||||||| ||||| ||||| | |||||
Sbjct: 1819094 ttcttggatatgcatacccagcctatgattgctacaagacggtggaactgaacaagcctg 1819035

                                                  
Query: 289     agattgagcagttgcggctctggtgtcagtactgg 323
               |||| ||| |||||||| |||||||||||||||||
Sbjct: 1819034 agatcgagaagttgcggttctggtgtcagtactgg 1819000



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                       
Query: 379     ggttgccaatgtatagtgaagcaaagctggcttttatcgt 418
               ||||||||||||| ||||||||||||||||| ||| ||||
Sbjct: 1818760 ggttgccaatgtacagtgaagcaaagctggcatttgtcgt 1818721



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                                
Query: 322     ggattttacttgcaatgcttactgttttcgaaagaattggggataattt 370
               |||||||||||||  | || |||||||| || ||| |||||||||||||
Sbjct: 1818910 ggattttacttgctgttctaactgtttttgatagagttggggataattt 1818862



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 107     cccgcgtcgccgccgccgac 126
               ||||||||||||||||||||
Sbjct: 3459786 cccgcgtcgccgccgccgac 3459767
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>gb|AC098693.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1004C08,
             complete sequence
          Length = 133090

 Score =  101 bits (51), Expect = 2e-18
 Identities = 84/95 (88%)
 Strand = Plus / Plus

                                                                         
Query: 229   ttcttggatatgcatatccggcttatgattgttacaagacagtggagctgaataggcctg 288
             |||||||||||||||| || || |||||||| |||||||| ||||| ||||| | |||||
Sbjct: 15268 ttcttggatatgcatacccagcctatgattgctacaagacggtggaactgaacaagcctg 15327

                                                
Query: 289   agattgagcagttgcggctctggtgtcagtactgg 323
             |||| ||| |||||||| |||||||||||||||||
Sbjct: 15328 agatcgagaagttgcggttctggtgtcagtactgg 15362



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                     
Query: 379   ggttgccaatgtatagtgaagcaaagctggcttttatcgt 418
             ||||||||||||| ||||||||||||||||| ||| ||||
Sbjct: 15602 ggttgccaatgtacagtgaagcaaagctggcatttgtcgt 15641



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                              
Query: 322   ggattttacttgcaatgcttactgttttcgaaagaattggggataattt 370
             |||||||||||||  | || |||||||| || ||| |||||||||||||
Sbjct: 15452 ggattttacttgctgttctaactgtttttgatagagttggggataattt 15500
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  101 bits (51), Expect = 2e-18
 Identities = 84/95 (88%)
 Strand = Plus / Minus

                                                                           
Query: 229     ttcttggatatgcatatccggcttatgattgttacaagacagtggagctgaataggcctg 288
               |||||||||||||||| || || |||||||| |||||||| ||||| ||||| | |||||
Sbjct: 1819092 ttcttggatatgcatacccagcctatgattgctacaagacggtggaactgaacaagcctg 1819033

                                                  
Query: 289     agattgagcagttgcggctctggtgtcagtactgg 323
               |||| ||| |||||||| |||||||||||||||||
Sbjct: 1819032 agatcgagaagttgcggttctggtgtcagtactgg 1818998



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                       
Query: 379     ggttgccaatgtatagtgaagcaaagctggcttttatcgt 418
               ||||||||||||| ||||||||||||||||| ||| ||||
Sbjct: 1818758 ggttgccaatgtacagtgaagcaaagctggcatttgtcgt 1818719



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                                
Query: 322     ggattttacttgcaatgcttactgttttcgaaagaattggggataattt 370
               |||||||||||||  | || |||||||| || ||| |||||||||||||
Sbjct: 1818908 ggattttacttgctgttctaactgtttttgatagagttggggataattt 1818860



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 107     cccgcgtcgccgccgccgac 126
               ||||||||||||||||||||
Sbjct: 3459897 cccgcgtcgccgccgccgac 3459878
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>ref|NM_190040.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1374

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 110 gcgtcgccgccgccgacgagggccag 135
           ||||| ||||||||||||||||||||
Sbjct: 509 gcgtctccgccgccgacgagggccag 484
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                 
Query: 115     gccgccgccgacgagggccagcaccccgcgcgcg 148
               |||||||||| ||||| || ||||||||||||||
Sbjct: 1592382 gccgccgccgccgaggccctgcaccccgcgcgcg 1592349
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 110      gcgtcgccgccgccgacgagggccag 135
                ||||| ||||||||||||||||||||
Sbjct: 40962853 gcgtctccgccgccgacgagggccag 40962878



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 108      ccgcgtcgccgccgccgacgagggc 132
                |||||||||||||||||| ||||||
Sbjct: 39870132 ccgcgtcgccgccgccgaggagggc 39870156



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 105      cgcccgcgtcgccgccgccg 124
                ||||||||||||||||||||
Sbjct: 37677170 cgcccgcgtcgccgccgccg 37677151



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 104      gcgcccgcgtcgccgccgccgacg 127
                ||||||||| ||||||||||||||
Sbjct: 34570570 gcgcccgcgacgccgccgccgacg 34570593



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 105      cgcccgcgtcgccgccgccgacga 128
                |||||||| |||||||||||||||
Sbjct: 20464903 cgcccgcgccgccgccgccgacga 20464926



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 104     gcgcccgcgtcgccgccgccgacg 127
               ||||||||| ||||||||||||||
Sbjct: 2086041 gcgcccgcgccgccgccgccgacg 2086064
to top
>dbj|AP003246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0423A12
          Length = 178649

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 110   gcgtcgccgccgccgacgagggccag 135
             ||||| ||||||||||||||||||||
Sbjct: 91278 gcgtctccgccgccgacgagggccag 91303
to top
>dbj|AK072525.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023129D09, full
           insert sequence
          Length = 1661

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 110 gcgtcgccgccgccgacgagggccag 135
           ||||| ||||||||||||||||||||
Sbjct: 564 gcgtctccgccgccgacgagggccag 539
to top
>dbj|AK060679.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-C10, full
           insert sequence
          Length = 1573

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 110 gcgtcgccgccgccgacgagggccag 135
           ||||| ||||||||||||||||||||
Sbjct: 527 gcgtctccgccgccgacgagggccag 502
to top
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 133    cagcaccccgcgcgcgctctcggcc 157
              ||||||||||||||||| |||||||
Sbjct: 803958 cagcaccccgcgcgcgccctcggcc 803934
to top
>ref|NM_106221.1| Arabidopsis thaliana unknown protein AT1G75700 mRNA, complete cds
          Length = 501

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 232 ttggatatgcatatccggcttatga 256
           |||||||||||||||| ||||||||
Sbjct: 8   ttggatatgcatatcctgcttatga 32
to top
>ref|XM_475722.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3168

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 111 cgtcgccgccgccgacgaggg 131
           |||||||||||||||||||||
Sbjct: 258 cgtcgccgccgccgacgaggg 278
to top
>ref|XM_474352.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 600

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 104 gcgcccgcgtcgccgccgccg 124
           |||||||||||||||||||||
Sbjct: 317 gcgcccgcgtcgccgccgccg 297
to top
>ref|NM_189931.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1053

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 108 ccgcgtcgccgccgccgacgagggc 132
           |||||||||||||||||| ||||||
Sbjct: 906 ccgcgtcgccgccgccgaggagggc 930
to top
>gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1130G10,
              complete sequence
          Length = 143073

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 111    cgtcgccgccgccgacgaggg 131
              |||||||||||||||||||||
Sbjct: 118102 cgtcgccgccgccgacgaggg 118122
to top
>emb|AL606668.2|OSJN00083 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064G10,
              complete sequence
          Length = 150206

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 104    gcgcccgcgtcgccgccgccg 124
              |||||||||||||||||||||
Sbjct: 102254 gcgcccgcgtcgccgccgccg 102234
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 104      gcgcccgcgtcgccgccgccg 124
                |||||||||||||||||||||
Sbjct: 34648133 gcgcccgcgtcgccgccgccg 34648113



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 108      ccgcgtcgccgccgccgacg 127
                ||||||||||||||||||||
Sbjct: 30904998 ccgcgtcgccgccgccgacg 30905017
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 110      gcgtcgccgccgccgacgagg 130
                |||||||||||||||||||||
Sbjct: 23113800 gcgtcgccgccgccgacgagg 23113780
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 110      gcgtcgccgccgccgacgagggcca 134
                |||||||||||||| ||||||||||
Sbjct: 19719382 gcgtcgccgccgccaacgagggcca 19719358
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 111      cgtcgccgccgccgacgaggg 131
                |||||||||||||||||||||
Sbjct: 25477741 cgtcgccgccgccgacgaggg 25477761
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 108     ccgcgtcgccgccgccgacgagggc 132
               |||||||||||||||||||| ||||
Sbjct: 2286698 ccgcgtcgccgccgccgacgcgggc 2286674
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>gb|AC006434.5|AC006434 Genomic sequence for Arabidopsis thaliana BAC F10A5, complete sequence
          Length = 129547

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 232   ttggatatgcatatccggcttatga 256
             |||||||||||||||| ||||||||
Sbjct: 35232 ttggatatgcatatcctgcttatga 35208
to top
>dbj|AP003433.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0004D12
          Length = 138136

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 108   ccgcgtcgccgccgccgacgagggc 132
             |||||||||||||||||| ||||||
Sbjct: 50840 ccgcgtcgccgccgccgaggagggc 50864
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 110     gcgtcgccgccgccgacgagg 130
               |||||||||||||||||||||
Sbjct: 7097225 gcgtcgccgccgccgacgagg 7097245
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 110     gcgtcgccgccgccgacgagg 130
               |||||||||||||||||||||
Sbjct: 2386809 gcgtcgccgccgccgacgagg 2386829
to top
>dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0007M04
          Length = 176293

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 110   gcgtcgccgccgccgacgagggcca 134
             |||||||||||||| ||||||||||
Sbjct: 48333 gcgtcgccgccgccaacgagggcca 48309
to top
>dbj|AK121863.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033103C19, full
           insert sequence
          Length = 786

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 108 ccgcgtcgccgccgccgacgagggc 132
           |||||||||||||||||| ||||||
Sbjct: 416 ccgcgtcgccgccgccgaggagggc 440
to top
>dbj|AK107178.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-G11, full
           insert sequence
          Length = 3602

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 111 cgtcgccgccgccgacgaggg 131
           |||||||||||||||||||||
Sbjct: 343 cgtcgccgccgccgacgaggg 363
to top
>dbj|AK100001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134P07, full
           insert sequence
          Length = 2064

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 110 gcgtcgccgccgccgacgagg 130
           |||||||||||||||||||||
Sbjct: 113 gcgtcgccgccgccgacgagg 93
to top
>dbj|AK071387.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091J19, full
           insert sequence
          Length = 906

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 110 gcgtcgccgccgccgacgagg 130
           |||||||||||||||||||||
Sbjct: 113 gcgtcgccgccgccgacgagg 93
to top
>dbj|AK059971.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-H01, full
           insert sequence
          Length = 905

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 110 gcgtcgccgccgccgacgagg 130
           |||||||||||||||||||||
Sbjct: 112 gcgtcgccgccgccgacgagg 92
to top
>emb|AL732349.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0402C08, complete
             sequence
          Length = 100836

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 104   gcgcccgcgtcgccgccgccg 124
             |||||||||||||||||||||
Sbjct: 54234 gcgcccgcgtcgccgccgccg 54214
to top
>gb|AF081810.1|AF081810 Lymantria dispar nucleopolyhedrovirus, complete genome
          Length = 161046

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 110   gcgtcgccgccgccgacgagg 130
             |||||||||||||||||||||
Sbjct: 51084 gcgtcgccgccgccgacgagg 51064



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 105   cgcccgcgtcgccgccgccg 124
             ||||||||||||||||||||
Sbjct: 78002 cgcccgcgtcgccgccgccg 77983



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 104   gcgcccgcgtcgccgccgccgacg 127
             |||||||||||| |||||||||||
Sbjct: 38286 gcgcccgcgtcggcgccgccgacg 38309
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 110      gcgtcgccgccgccgacgagg 130
                |||||||||||||||||||||
Sbjct: 23041991 gcgtcgccgccgccgacgagg 23041971
to top
>emb|AL928753.3|CNS08CBQ Oryza sativa chromosome 12, . BAC OSJNBb0076G11 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 135323

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 110   gcgtcgccgccgccgacgagg 130
             |||||||||||||||||||||
Sbjct: 64597 gcgtcgccgccgccgacgagg 64617
to top
>gb|AF386526.1| Shigella flexneri 2a str. 301 virulence plasmid pCP301, complete sequence
          Length = 221618

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 79     gcacctcccgcccctgctcc 98
              ||||||||||||||||||||
Sbjct: 200206 gcacctcccgcccctgctcc 200187
to top
>gb|AC151776.1| Ornithorhynchus anatinus chromosome UNK clone OABb-272A1, complete
             sequence
          Length = 126974

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 176   gaaaggggtcaagatggttg 195
             ||||||||||||||||||||
Sbjct: 45447 gaaaggggtcaagatggttg 45428
to top
>ref|XM_550071.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2179

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 104 gcgcccgcgtcgccgccgccgacg 127
           ||||||||| ||||||||||||||
Sbjct: 131 gcgcccgcgccgccgccgccgacg 108
to top
>ref|NM_190780.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1533

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 105 cgcccgcgtcgccgccgccg 124
           ||||||||||||||||||||
Sbjct: 156 cgcccgcgtcgccgccgccg 175
to top
>ref|NM_191064.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1272

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 104  gcgcccgcgtcgccgccgccgacg 127
            ||||||||| ||||||||||||||
Sbjct: 980  gcgcccgcgacgccgccgccgacg 1003
to top
>ref|NM_193374.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1992

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 105 cgcccgcgtcgccgccgccgacga 128
           |||||||| |||||||||||||||
Sbjct: 457 cgcccgcgccgccgccgccgacga 434
to top
>ref|XM_516046.1| PREDICTED: Pan troglodytes similar to hypothetical protein FLJ20309
            (LOC459895), mRNA
          Length = 2707

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 245  tccggcttatgattgttaca 264
            ||||||||||||||||||||
Sbjct: 1430 tccggcttatgattgttaca 1411
to top
>ref|XM_479183.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1161

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 114 cgccgccgccgacgagggcc 133
           ||||||||||||||||||||
Sbjct: 68  cgccgccgccgacgagggcc 87
to top
>ref|XM_473839.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1374

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 108 ccgcgtcgccgccgccgacg 127
           ||||||||||||||||||||
Sbjct: 717 ccgcgtcgccgccgccgacg 736
to top
>gb|AF550679.1| Escherichia coli plasmid p1658/97, complete sequence
          Length = 125491

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    gcacctcccgcccctgctcc 98
             ||||||||||||||||||||
Sbjct: 30048 gcacctcccgcccctgctcc 30029
to top
>gb|U01159.2| Escherichia coli F sex factor transfer region
          Length = 33359

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    gcacctcccgcccctgctcc 98
             ||||||||||||||||||||
Sbjct: 28036 gcacctcccgcccctgctcc 28017
to top
>gb|AY458016.1| Escherichia coli plasmid pC15-1a, complete sequence
          Length = 92353

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    gcacctcccgcccctgctcc 98
             ||||||||||||||||||||
Sbjct: 79382 gcacctcccgcccctgctcc 79363
to top
>ref|NM_015906.3| Homo sapiens tripartite motif-containing 33 (TRIM33), transcript
           variant a, mRNA
          Length = 8339

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 105 cgcccgcgtcgccgccgccg 124
           ||||||||||||||||||||
Sbjct: 42  cgcccgcgtcgccgccgccg 23
to top
>ref|NM_033020.2| Homo sapiens tripartite motif-containing 33 (TRIM33), transcript
           variant b, mRNA
          Length = 8288

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 105 cgcccgcgtcgccgccgccg 124
           ||||||||||||||||||||
Sbjct: 42  cgcccgcgtcgccgccgccg 23
to top
>gb|CP000051.1| Chlamydia trachomatis A/HAR-13, complete genome
          Length = 1044459

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 388    tgtatagtgaagcaaagctg 407
              ||||||||||||||||||||
Sbjct: 609798 tgtatagtgaagcaaagctg 609817
to top
>gb|AY272055.2| Chlamydomonas reinhardtii chlamyopsin-5 gene, complete cds
          Length = 7966

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 165  tgcagcgggaggaaaggggt 184
            ||||||||||||||||||||
Sbjct: 3475 tgcagcgggaggaaaggggt 3494
to top
>gb|AY206447.1| Shigella flexneri plasmid pINV_F6_M1382 TrbH (trbH), MvpA (mvpA), and
            MvpT (mvpT) genes, complete cds; traI-like pseudogene,
            complete sequence; and TraX (traX) and FinO (finO) genes,
            complete cds
          Length = 7375

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 79   gcacctcccgcccctgctcc 98
            ||||||||||||||||||||
Sbjct: 2113 gcacctcccgcccctgctcc 2094
to top
>gb|CP000244.1| Escherichia coli UTI89 plasmid pUTI89, complete sequence
          Length = 114230

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 79     gcacctcccgcccctgctcc 98
              ||||||||||||||||||||
Sbjct: 106662 gcacctcccgcccctgctcc 106643
to top
>emb|X66126.1|CTMIPL2 C.trachomatis (L2) gene for mip-like protein
          Length = 900

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 388 tgtatagtgaagcaaagctg 407
           ||||||||||||||||||||
Sbjct: 579 tgtatagtgaagcaaagctg 560
to top
>emb|Z98950.1|HS507I15 Human DNA sequence from clone RP3-507I15 on chromosome Xq26.3-27.3
             Contains a ribosomal protein L36a (RPL36A) pseudogene,
             complete sequence
          Length = 123556

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 266   gacagtggagctgaataggc 285
             ||||||||||||||||||||
Sbjct: 84364 gacagtggagctgaataggc 84345
to top
>emb|AL390241.19| Human DNA sequence from clone RP11-343L14 on chromosome 1 Contains the
             3' end of a ribosomal protein L26 (RPL26) pseudogene, a
             eukaryotic translation initiation factor 2 subunit 2 beta
             38kDa (EIF2S2) pseudogene, the 5' end of the TRIM33 gene
             for tripartite motif-containing 33, a  pyruvate kinase
             muscle (PKM2) pseudogene, the BCAS2 gene for breast
             carcinoma amplified sequence 2, the 3' end of the gene for
             a novel protein (FLJ37099) and a CpG island, complete
             sequence
          Length = 123501

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 105   cgcccgcgtcgccgccgccg 124
             ||||||||||||||||||||
Sbjct: 50938 cgcccgcgtcgccgccgccg 50957
to top
>emb|AL050308.9|HSG164F24 Human DNA sequence from clone GS1-164F24 on chromosome Xq26.3-27.3
             Contains a NADH dehydrogenase (ubiquinone) 1 beta
             subcomplex, 3 (12kD, B12) (NDUFB3) pseudogene and part of
             a novel gene, complete sequence
          Length = 213084

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 266   gacagtggagctgaataggc 285
             ||||||||||||||||||||
Sbjct: 62759 gacagtggagctgaataggc 62778
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>gb|AC175117.2| Mus musculus chromosome 3, clone wi1-709N8, complete sequence
          Length = 40863

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 257   ttgttacaagacagtggagc 276
             ||||||||||||||||||||
Sbjct: 23342 ttgttacaagacagtggagc 23323
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>emb|X66128.1|CTMIPB C.trachomatis (B) gene for mip-like protein
          Length = 732

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 388 tgtatagtgaagcaaagctg 407
           ||||||||||||||||||||
Sbjct: 480 tgtatagtgaagcaaagctg 461
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>emb|X66127.1|CTMIPE C.trachomatis (E) gene for mip-like protein
          Length = 732

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 388 tgtatagtgaagcaaagctg 407
           ||||||||||||||||||||
Sbjct: 480 tgtatagtgaagcaaagctg 461
to top
>emb|X55815.1|ECR100TRA Plasmid R100 promoter-distal region of the tra operon including traI
            and traD genes
          Length = 12120

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 79   gcacctcccgcccctgctcc 98
            ||||||||||||||||||||
Sbjct: 4623 gcacctcccgcccctgctcc 4604
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>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29
          Length = 296500

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 104   gcgcccgcgtcgccgccgccgacg 127
             |||||||||||| |||||||||||
Sbjct: 76426 gcgcccgcgtcgtcgccgccgacg 76449
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>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29
          Length = 303550

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 105    cgcccgcgtcgccgccgccgacga 128
              ||||||||| ||||||||||||||
Sbjct: 298372 cgcccgcgtagccgccgccgacga 298349
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>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29
          Length = 276800

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 105 cgcccgcgtcgccgccgccg 124
           ||||||||||||||||||||
Sbjct: 335 cgcccgcgtcgccgccgccg 316
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>emb|AL606691.4|OSJN00081 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060N03,
              complete sequence
          Length = 179798

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 108    ccgcgtcgccgccgccgacg 127
              ||||||||||||||||||||
Sbjct: 172519 ccgcgtcgccgccgccgacg 172538
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>emb|AL606684.3|OSJN00088 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0085I10,
            complete sequence
          Length = 150551

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 108  ccgcgtcgccgccgccgacg 127
            ||||||||||||||||||||
Sbjct: 2366 ccgcgtcgccgccgccgacg 2385
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>emb|AL391753.1|SFPWR100 Shigella flexneri virulence plasmid pWR100: from 1 to 213494
          Length = 213494

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 79     gcacctcccgcccctgctcc 98
              ||||||||||||||||||||
Sbjct: 193866 gcacctcccgcccctgctcc 193847
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>dbj|AP003570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0432B10
          Length = 131918

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 104   gcgcccgcgtcgccgccgccgacg 127
             ||||||||| ||||||||||||||
Sbjct: 67864 gcgcccgcgacgccgccgccgacg 67887
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>gb|AY119024.1| Drosophila melanogaster LP05023 full insert cDNA
          Length = 2269

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 116  ccgccgccgacgagggccag 135
            ||||||||||||||||||||
Sbjct: 1213 ccgccgccgacgagggccag 1232
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>dbj|AP001918.1| Plasmid F genomic DNA, complete sequence
          Length = 99159

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    gcacctcccgcccctgctcc 98
             ||||||||||||||||||||
Sbjct: 94062 gcacctcccgcccctgctcc 94043
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>gb|AC104428.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1123F12,
             complete sequence
          Length = 103330

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 107   cccgcgtcgccgccgccgac 126
             ||||||||||||||||||||
Sbjct: 50589 cccgcgtcgccgccgccgac 50608
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>ref|NM_078670.2| Drosophila melanogaster Dynein heavy chain at 16F CG7092-RA (Dhc16F),
             mRNA
          Length = 12323

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 116   ccgccgccgacgagggccag 135
             ||||||||||||||||||||
Sbjct: 11300 ccgccgccgacgagggccag 11319
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>gb|DQ381420.1| Escherichia coli plasmid pAPEC-O1-ColBM, complete sequence
          Length = 174241

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    gcacctcccgcccctgctcc 98
             ||||||||||||||||||||
Sbjct: 45947 gcacctcccgcccctgctcc 45928
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>gb|AC011614.8| Drosophila melanogaster, chromosome X, region 16F-17A, BAC clone
              BACR48L05, complete sequence
          Length = 177138

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 116    ccgccgccgacgagggccag 135
              ||||||||||||||||||||
Sbjct: 161164 ccgccgccgacgagggccag 161145
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>gb|AF348706.1|AF348706 Shigella flexneri large virulence plasmid pWR501, complete plasmid
              sequence
          Length = 221851

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 79     gcacctcccgcccctgctcc 98
              ||||||||||||||||||||
Sbjct: 191554 gcacctcccgcccctgctcc 191535
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>gb|AC012163.13|AC012163 Drosophila melanogaster, chromosome X, region 16F-16F, BAC clone
              BACR17D02, complete sequence
          Length = 186748

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 116    ccgccgccgacgagggccag 135
              ||||||||||||||||||||
Sbjct: 169498 ccgccgccgacgagggccag 169517
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 114      cgccgccgccgacgagggcc 133
                ||||||||||||||||||||
Sbjct: 25595514 cgccgccgccgacgagggcc 25595495



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 111      cgtcgccgccgccgacgagg 130
                ||||||||||||||||||||
Sbjct: 17445198 cgtcgccgccgccgacgagg 17445217
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>gb|U82621.1|SFU82621 Shigella flexneri plasmid pMYSH6000, MsbB homolog (msbB) gene,
            partial cds, hypothetical protein gene, complete cds,
            TraD homolog (traD) pseudogene, parital sequence, TrbH
            homolog (trbH), putative STBORF2 (stborf2) and putative
            STBORF1 (stborf1) genes, complete cds, and traI
            pseudogene, partial sequence
          Length = 5430

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 79   gcacctcccgcccctgctcc 98
            ||||||||||||||||||||
Sbjct: 5296 gcacctcccgcccctgctcc 5277
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>dbj|AP004614.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0042P21
          Length = 141230

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 105    cgcccgcgtcgccgccgccgacga 128
              |||||||| |||||||||||||||
Sbjct: 121018 cgcccgcgccgccgccgccgacga 121041
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>dbj|AP004331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0085D07
          Length = 172483

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 104   gcgcccgcgtcgccgccgccgacg 127
             ||||||||| ||||||||||||||
Sbjct: 22587 gcgcccgcgacgccgccgccgacg 22610
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>ref|XM_342524.2| PREDICTED: Rattus norvegicus phospholipase C, beta 1 (Plcb1),
          mRNA
          Length = 7198

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 76 tccgcacctcccgcccctgctccg 99
          ||||| ||||||||||||||||||
Sbjct: 73 tccgctcctcccgcccctgctccg 50
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>dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0677H08
          Length = 178830

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 105    cgcccgcgtcgccgccgccg 124
              ||||||||||||||||||||
Sbjct: 137644 cgcccgcgtcgccgccgccg 137625
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>dbj|AP003235.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0039A07
          Length = 148892

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 105  cgcccgcgtcgccgccgccg 124
            ||||||||||||||||||||
Sbjct: 5471 cgcccgcgtcgccgccgccg 5452
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>gb|AE001273.1| Chlamydia trachomatis D/UW-3/CX, complete genome
          Length = 1042519

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 388    tgtatagtgaagcaaagctg 407
              ||||||||||||||||||||
Sbjct: 607090 tgtatagtgaagcaaagctg 607109
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>dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0594D10
          Length = 143200

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 114   cgccgccgccgacgagggcc 133
             ||||||||||||||||||||
Sbjct: 49487 cgccgccgccgacgagggcc 49468
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>dbj|AP004299.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0434A03
          Length = 146505

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 111    cgtcgccgccgccgacgagg 130
              ||||||||||||||||||||
Sbjct: 113422 cgtcgccgccgccgacgagg 113441
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>dbj|AP003247.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0425G02
          Length = 155432

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 104    gcgcccgcgtcgccgccgccgacg 127
              ||||||||| ||||||||||||||
Sbjct: 146289 gcgcccgcgacgccgccgccgacg 146312
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>dbj|AP002913.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0480E02
          Length = 141862

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 104  gcgcccgcgtcgccgccgccgacg 127
            ||||||||| ||||||||||||||
Sbjct: 7153 gcgcccgcgccgccgccgccgacg 7176
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>dbj|AK099524.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013030K11, full
           insert sequence
          Length = 1160

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 114 cgccgccgccgacgagggcc 133
           ||||||||||||||||||||
Sbjct: 67  cgccgccgccgacgagggcc 86
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>dbj|AK099060.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157I01, full
           insert sequence
          Length = 2504

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 104 gcgcccgcgtcgccgccgccgacg 127
           ||||||||| ||||||||||||||
Sbjct: 132 gcgcccgcgccgccgccgccgacg 109
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>dbj|AK098894.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001N23, full
           insert sequence
          Length = 2578

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 104 gcgcccgcgtcgccgccgccgacg 127
           ||||||||| ||||||||||||||
Sbjct: 131 gcgcccgcgccgccgccgccgacg 108
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>dbj|AK098852.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000H09, full
           insert sequence
          Length = 2579

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 104 gcgcccgcgtcgccgccgccgacg 127
           ||||||||| ||||||||||||||
Sbjct: 133 gcgcccgcgccgccgccgccgacg 110
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>dbj|AK071382.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091N20, full
           insert sequence
          Length = 4120

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 111 cgtcgccgccgccgacgagg 130
           ||||||||||||||||||||
Sbjct: 131 cgtcgccgccgccgacgagg 150
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>dbj|AK065080.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001L07, full
           insert sequence
          Length = 2610

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 104 gcgcccgcgtcgccgccgccgacg 127
           ||||||||| ||||||||||||||
Sbjct: 164 gcgcccgcgccgccgccgccgacg 141
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>emb|AL442105.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0702G05, complete
             sequence
          Length = 134586

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 108   ccgcgtcgccgccgccgacg 127
             ||||||||||||||||||||
Sbjct: 81992 ccgcgtcgccgccgccgacg 82011
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>gb|L14323.2|RATPHOSPHB Rattus norvegicus phospholipase C-beta1b mRNA, complete sequence
          Length = 7204

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 76 tccgcacctcccgcccctgctccg 99
          ||||| ||||||||||||||||||
Sbjct: 73 tccgctcctcccgcccctgctccg 50
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>gb|AE003507.3| Drosophila melanogaster chromosome X, section 59 of 74 of the complete
              sequence
          Length = 299804

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 116    ccgccgccgacgagggccag 135
              ||||||||||||||||||||
Sbjct: 224671 ccgccgccgacgagggccag 224690
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 104     gcgcccgcgtcgccgccgcc 123
               ||||||||||||||||||||
Sbjct: 1987995 gcgcccgcgtcgccgccgcc 1988014
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>gb|AY879342.1| Shigella flexneri plasmid pSF5, complete sequence
          Length = 136694

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 79    gcacctcccgcccctgctcc 98
             ||||||||||||||||||||
Sbjct: 55619 gcacctcccgcccctgctcc 55638
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>gb|M54796.1|FPLTRAID Plasmid F (from E.coli) helicase I (traI) gene, complete cds and traD
            gene product, 3' end
          Length = 6881

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 79   gcacctcccgcccctgctcc 98
            ||||||||||||||||||||
Sbjct: 2876 gcacctcccgcccctgctcc 2857
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>emb|AL840635.6| Mouse DNA sequence from clone RP23-418D21 on chromosome 2, complete
             sequence
          Length = 201328

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 76    tccgcacctcccgcccctgctccg 99
             ||||| ||||||||||||||||||
Sbjct: 28355 tccgctcctcccgcccctgctccg 28332
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>gb|CP000037.1| Shigella boydii Sb227 plasmid pSB4_227, complete sequence
          Length = 126697

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 79     gcacctcccgcccctgctcc 98
              ||||||||||||||||||||
Sbjct: 104323 gcacctcccgcccctgctcc 104304
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>gb|M20636.1|RATPLC1A Rat phospholipase C-1 mRNA, complete cds
          Length = 5217

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 76  tccgcacctcccgcccctgctccg 99
           ||||| ||||||||||||||||||
Sbjct: 103 tccgctcctcccgcccctgctccg 80
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>gb|CP000039.1| Shigella sonnei Ss046 plasmid pSS_046, complete sequence
          Length = 214396

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 79     gcacctcccgcccctgctcc 98
              ||||||||||||||||||||
Sbjct: 170731 gcacctcccgcccctgctcc 170712
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>dbj|AP000342.1| Plasmid R100 DNA, complete sequence
          Length = 94281

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    gcacctcccgcccctgctcc 98
             ||||||||||||||||||||
Sbjct: 79855 gcacctcccgcccctgctcc 79836


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,311,160
Number of Sequences: 3902068
Number of extensions: 3311160
Number of successful extensions: 86495
Number of sequences better than 10.0: 110
Number of HSP's better than 10.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83779
Number of HSP's gapped (non-prelim): 2715
length of query: 426
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 404
effective length of database: 17,147,199,772
effective search space: 6927468707888
effective search space used: 6927468707888
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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