ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart57a09 |
|---|---|
| Clone Library Name | barley_pub |
>5NG4_PINTA (Q6J163) Auxin-induced protein 5NG4| Length = 410 Score = 97.4 bits (241), Expect = 2e-20 Identities = 47/148 (31%), Positives = 88/148 (59%) Frame = +2 Query: 65 KAYGAVVLIRVMYSGMHIMSKIALDQGMNPFVFVFYRHTTAALVLIPIAFALERQKTKPV 244 K + A++ ++ Y+G HI+S+ AL+ G++ VF YR+ A +++ P A+ LE+++ + Sbjct: 18 KLHAAMLALQFGYAGFHIVSRAALNMGVSKVVFPVYRNILALMLIGPCAYFLEKKERPAL 77 Query: 245 TLKIAGKMFVHALYGVTACGVLFNLGLNYASATSSSALYNVQPVVTFILAVIIGMESMKL 424 TL + F+ AL G+T + +L + T +SA+ N P +TFI+A + +E + + Sbjct: 78 TLSFLIQFFLLALCGITGQSRILSLRIVLHIPTFASAIQNSVPAITFIMAAALRLEKVHI 137 Query: 425 KKLHGNLKVAGILCCVAGVTVLAFYEGP 508 + G K+ G + CV+G T++ Y+GP Sbjct: 138 SRRDGLAKIIGTVACVSGATIITLYKGP 165
>YCAY_CLOKL (P38943) Hypothetical transport protein in cat1 5'region (ORFY)| Length = 311 Score = 42.7 bits (99), Expect = 7e-04 Identities = 31/143 (21%), Positives = 62/143 (43%), Gaps = 1/143 (0%) Frame = +2 Query: 65 KAYGAVVLIRVMYSGMHIMSKIALDQG-MNPFVFVFYRHTTAALVLIPIAFALERQKTKP 241 K Y ++L + YS I K+ +G M+PF + A++L+P+A + K Sbjct: 3 KGYIFILLTAIFYSTQEISGKMLAQKGAMDPFQVMMIVFLIGAIILLPMAVKDIKVKKLK 62 Query: 242 VTLKIAGKMFVHALYGVTACGVLFNLGLNYASATSSSALYNVQPVVTFILAVIIGMESMK 421 +T G + + + V+ + + Y A++++ L+ V T A I E +K Sbjct: 63 LTGNDLGYLALCGILAVSISMSMLQFAVTYTKASTAAVLFCTNAVFTIPFAYFILKEKIK 122 Query: 422 LKKLHGNLKVAGILCCVAGVTVL 490 + + I+ + GV ++ Sbjct: 123 ------GITIVSIIVSLIGVVII 139
>Y266_ARCFU (O29973) Hypothetical transport protein AF0266| Length = 276 Score = 38.5 bits (88), Expect = 0.014 Identities = 25/86 (29%), Positives = 41/86 (47%) Frame = +2 Query: 236 KPVTLKIAGKMFVHALYGVTACGVLFNLGLNYASATSSSALYNVQPVVTFILAVIIGMES 415 K + K K+F ++GV+ V NLG Y S+ +S + ++ P+ IL+ I E Sbjct: 53 KRIKWKDLPKVFALGIFGVSVYHVFLNLGEVYISSGVASVVISLAPIFVLILSAIFLRER 112 Query: 416 MKLKKLHGNLKVAGILCCVAGVTVLA 493 + KV GI+ GV V++ Sbjct: 113 ITYS------KVVGIIIAFLGVVVIS 132
>YVBV_BACSU (O32256) Hypothetical transport protein yvbV| Length = 305 Score = 37.4 bits (85), Expect = 0.031 Identities = 39/129 (30%), Positives = 60/129 (46%), Gaps = 4/129 (3%) Frame = +2 Query: 119 MSKIALDQGMNPFVFVFYRHTTAALVLIPIAFA----LERQKTKPVTLKIAGKMFVHALY 286 +SK AL P +F R L+L+ +A L ++T P+ L V AL Sbjct: 26 LSKAALAYSP-PLLFAGIRTLIGGLLLVIVALPRIHKLRLKETWPIYL-------VSALL 77 Query: 287 GVTACGVLFNLGLNYASATSSSALYNVQPVVTFILAVIIGMESMKLKKLHGNLKVAGILC 466 +T L +GLNY A SA+ QPV+ + + + ESM + +KV G++ Sbjct: 78 NITLFYGLQTIGLNYLPAGLFSAIVFFQPVLMGVFSWLWLGESMFV------MKVIGLIL 131 Query: 467 CVAGVTVLA 493 AGV V++ Sbjct: 132 GFAGVAVIS 140
>GPR61_MOUSE (Q8C010) Probable G-protein coupled receptor 61| Length = 449 Score = 33.5 bits (75), Expect = 0.44 Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 1/86 (1%) Frame = +2 Query: 116 IMSKIALDQGMNPFVFVFYRHTTAALVLIPIAFALERQKTKPVTLKIAGKMFVHALYGVT 295 +M+ IA + FVFVF+ L L+ + AL P+ + + +F HAL+G Sbjct: 63 VMAVIAKTPALRKFVFVFH------LCLVDLLAALTLM---PLAMLSSSALFDHALFGEV 113 Query: 296 ACGVLFNLGLNYAS-ATSSSALYNVQ 370 AC + L + + S A S + NV+ Sbjct: 114 ACRLYLFLSVCFVSLAILSVSAINVE 139
>GPR61_HUMAN (Q9BZJ8) Probable G-protein coupled receptor 61 (Biogenic amine| receptor-like G-protein coupled receptor) Length = 451 Score = 33.5 bits (75), Expect = 0.44 Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 1/86 (1%) Frame = +2 Query: 116 IMSKIALDQGMNPFVFVFYRHTTAALVLIPIAFALERQKTKPVTLKIAGKMFVHALYGVT 295 +M+ IA + FVFVF+ L L+ + AL P+ + + +F HAL+G Sbjct: 63 VMAVIAKTPALRKFVFVFH------LCLVDLLAALTLM---PLAMLSSSALFDHALFGEV 113 Query: 296 ACGVLFNLGLNYAS-ATSSSALYNVQ 370 AC + L + + S A S + NV+ Sbjct: 114 ACRLYLFLSVCFVSLAILSVSAINVE 139
>BIB_DROME (P23645) Neurogenic protein big brain| Length = 696 Score = 33.5 bits (75), Expect = 0.44 Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 13/109 (11%) Frame = +2 Query: 281 LYGVTACGVLFNL--GLNYASATSSSALYNVQPVVTFILAVIIGMESMKLKKLHGN---- 442 LYGVT G NL +++++A ++ + V+ ++TF++ + + + +KK GN Sbjct: 162 LYGVTVPGYQGNLQAAISHSAALAAWERFGVEFILTFLVVLCYFVSTDPMKKFMGNSAAS 221 Query: 443 LKVAGILCCVAGVTVL--AFYEGPMF--RSFDHHRLFQHG---SGSSSG 568 + A CC + L A GP F +D H ++ G G +SG Sbjct: 222 IGCAYSACCFVSMPYLNPARSLGPSFVLNKWDSHWVYWFGPLVGGMASG 270
>Y1388_STAAC (Q5HG66) UPF0078 membrane protein SACOL1388| Length = 202 Score = 32.3 bits (72), Expect = 0.98 Identities = 17/56 (30%), Positives = 29/56 (51%) Frame = +2 Query: 332 ASATSSSALYNVQPVVTFILAVIIGMESMKLKKLHGNLKVAGILCCVAGVTVLAFY 499 A ATS+ + V P++ ILA+I + +K+ K + +CCV G ++ Y Sbjct: 113 AVATSAGVVLGVNPILLLILAIIFFI-VLKIFKYVSLASIVAAICCVIGSLIIQDY 167
>Y1365_STAAR (Q6GH52) UPF0078 membrane protein SAR1365| Length = 202 Score = 32.3 bits (72), Expect = 0.98 Identities = 17/56 (30%), Positives = 29/56 (51%) Frame = +2 Query: 332 ASATSSSALYNVQPVVTFILAVIIGMESMKLKKLHGNLKVAGILCCVAGVTVLAFY 499 A ATS+ + V P++ ILA+I + +K+ K + +CCV G ++ Y Sbjct: 113 AVATSAGVVLGVNPILLLILAIIFFI-VLKIFKYVSLASIVAAICCVIGSLIIQDY 167
>Y1353_STAAM (P67163) UPF0078 membrane protein SAV1353| Length = 202 Score = 32.3 bits (72), Expect = 0.98 Identities = 17/56 (30%), Positives = 29/56 (51%) Frame = +2 Query: 332 ASATSSSALYNVQPVVTFILAVIIGMESMKLKKLHGNLKVAGILCCVAGVTVLAFY 499 A ATS+ + V P++ ILA+I + +K+ K + +CCV G ++ Y Sbjct: 113 AVATSAGVVLGVNPILLLILAIIFFI-VLKIFKYVSLASIVAAICCVIGSLIIQDY 167
>Y1293_STAAS (Q6G9K6) UPF0078 membrane protein SAS1293| Length = 202 Score = 32.3 bits (72), Expect = 0.98 Identities = 17/56 (30%), Positives = 29/56 (51%) Frame = +2 Query: 332 ASATSSSALYNVQPVVTFILAVIIGMESMKLKKLHGNLKVAGILCCVAGVTVLAFY 499 A ATS+ + V P++ ILA+I + +K+ K + +CCV G ++ Y Sbjct: 113 AVATSAGVVLGVNPILLLILAIIFFI-VLKIFKYVSLASIVAAICCVIGSLIIQDY 167
>Y1240_STAAW (P67165) UPF0078 membrane protein MW1240| Length = 202 Score = 32.3 bits (72), Expect = 0.98 Identities = 17/56 (30%), Positives = 29/56 (51%) Frame = +2 Query: 332 ASATSSSALYNVQPVVTFILAVIIGMESMKLKKLHGNLKVAGILCCVAGVTVLAFY 499 A ATS+ + V P++ ILA+I + +K+ K + +CCV G ++ Y Sbjct: 113 AVATSAGVVLGVNPILLLILAIIFFI-VLKIFKYVSLASIVAAICCVIGSLIIQDY 167
>Y1187_STAAN (P67164) UPF0078 membrane protein SA1187| Length = 202 Score = 32.3 bits (72), Expect = 0.98 Identities = 17/56 (30%), Positives = 29/56 (51%) Frame = +2 Query: 332 ASATSSSALYNVQPVVTFILAVIIGMESMKLKKLHGNLKVAGILCCVAGVTVLAFY 499 A ATS+ + V P++ ILA+I + +K+ K + +CCV G ++ Y Sbjct: 113 AVATSAGVVLGVNPILLLILAIIFFI-VLKIFKYVSLASIVAAICCVIGSLIIQDY 167
>OPSG1_CARAU (P32311) Green-sensitive opsin-1 (Green cone photoreceptor pigment| 1) Length = 349 Score = 32.3 bits (72), Expect = 0.98 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 8/65 (12%) Frame = +2 Query: 221 ERQKTKPVTLKIAGKMFVHALYGVTACGVLFNLGLNYASA--------TSSSALYNVQPV 376 ER+ TK V L + G + Y A + FN G ++++ + SSALYN PV Sbjct: 247 EREVTKMVILMVFGFLIAWTPYATVAAWIFFNKGADFSAKFMAIPAFFSKSSALYN--PV 304 Query: 377 VTFIL 391 + +L Sbjct: 305 IYVLL 309
>PECM_DICD3 (P42194) Protein pecM| Length = 297 Score = 32.0 bits (71), Expect = 1.3 Identities = 29/146 (19%), Positives = 58/146 (39%) Frame = +2 Query: 56 NGAKAYGAVVLIRVMYSGMHIMSKIALDQGMNPFVFVFYRHTTAALVLIPIAFALERQKT 235 N A + + M SG+ + K GM F ++ LV++P+ E Sbjct: 137 NPAGLVASALATMSMASGLVLTKKWGRPAGMTMLTFTGWQLFCGGLVILPVQMLTEPLPD 196 Query: 236 KPVTLKIAGKMFVHALYGVTACGVLFNLGLNYASATSSSALYNVQPVVTFILAVIIGMES 415 +AG +++ A+ G ++ GL S S L + P+V +L + + Sbjct: 197 LVTLTNLAGYLYL-AIPGSLLAYFMWFSGLEANSPVIMSLLGFLSPLVALLLGFLFLQQG 255 Query: 416 MKLKKLHGNLKVAGILCCVAGVTVLA 493 + +L G + + L V +++ + Sbjct: 256 LSGAQLVGVVFIFSALIIVQDISLFS 281
>LEU1_SALTY (P15875) 2-isopropylmalate synthase (EC 2.3.3.13)| (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) Length = 522 Score = 32.0 bits (71), Expect = 1.3 Identities = 15/46 (32%), Positives = 22/46 (47%) Frame = +1 Query: 292 NSLWRLIQPWSQLCIRDIIVGVVQCSTGGYLHSGGHNWDGVYETEE 429 + +WR Q SQ+C I +G + HS G + DGV + E Sbjct: 263 HEIWRTSQTVSQICNMPIPANKAIVGSGAFAHSSGIHQDGVLKNRE 308
>LEU1_SALTI (Q8Z9I0) 2-isopropylmalate synthase (EC 2.3.3.13)| (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) Length = 522 Score = 32.0 bits (71), Expect = 1.3 Identities = 15/46 (32%), Positives = 22/46 (47%) Frame = +1 Query: 292 NSLWRLIQPWSQLCIRDIIVGVVQCSTGGYLHSGGHNWDGVYETEE 429 + +WR Q SQ+C I +G + HS G + DGV + E Sbjct: 263 HEIWRTSQTVSQICNMPIPANKAIVGSGAFAHSSGIHQDGVLKNRE 308
>YYAM_BACSU (P37511) Hypothetical transport protein yyaM| Length = 305 Score = 31.2 bits (69), Expect = 2.2 Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 5/82 (6%) Frame = +2 Query: 233 TKPVTLK-----IAGKMFVHALYGVTACGVLFNLGLNYASATSSSALYNVQPVVTFILAV 397 +KPV+L + G + A + + +N G+ A+ +S +N+ PVVT I++ Sbjct: 205 SKPVSLSNIPIGVWGAIAFMAFFTSVLGYLWWNQGIKEIGASKTSLFFNLVPVVTMIISF 264 Query: 398 IIGMESMKLKKLHGNLKVAGIL 463 +G + + L + G+L Sbjct: 265 AVGTPIKVFQVIGAVLVILGVL 286
>HABP2_BOVIN (Q5E9Z2) Hyaluronan-binding protein 2 precursor (EC 3.4.21.-)| [Contains: Hyaluronan-binding protein 2 50 kDa heavy chain; Hyaluronan-binding protein 2 50 kDa heavy chain alternate form; Hyaluronan-binding protein 2 27 kDa light chain; Hyaluro Length = 558 Score = 31.2 bits (69), Expect = 2.2 Identities = 10/13 (76%), Positives = 10/13 (76%) Frame = +1 Query: 172 PAYHRCPCAHPYR 210 P YHRC C HPYR Sbjct: 129 PPYHRCACKHPYR 141
>RYR2_HUMAN (Q92736) Ryanodine receptor 2 (Cardiac muscle-type ryanodine| receptor) (RyR2) (RYR-2) (Cardiac muscle ryanodine receptor-calcium release channel) (hRYR-2) Length = 4967 Score = 30.8 bits (68), Expect = 2.9 Identities = 33/153 (21%), Positives = 65/153 (42%), Gaps = 12/153 (7%) Frame = +2 Query: 23 KTLAKIRMGGANGAKAYGAVVLIRVMYSGMHI---------MSKIALDQGMNPFVFVFYR 175 K + K GG + YG +L+R YSGM++ K+A D G+ Sbjct: 99 KFMMKTAQGGGHRTLLYGHAILLRHSYSGMYLCCLSTSRSSTDKLAFDVGLQ-------E 151 Query: 176 HTTAALVLIPIAFALERQKTKPVTLKIAGKMFVHALYGVTACGVLFNLGLNYASATSSSA 355 TT I A +Q+++ +++ + + ++ + + G + A Sbjct: 152 DTTGEACWWTIHPA-SKQRSEGEKVRVGDDLILVSVSSERYLHLSYGNGSLHVDAAFQQT 210 Query: 356 LYNVQPVVTFILAV---IIGMESMKLKKLHGNL 445 L++V P+ + A +IG + ++L LHG++ Sbjct: 211 LWSVAPISSGSEAAQGYLIGGDVLRL--LHGHM 241
>LEU1_SHIFL (Q83SP0) 2-isopropylmalate synthase (EC 2.3.3.13)| (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) Length = 522 Score = 30.8 bits (68), Expect = 2.9 Identities = 15/44 (34%), Positives = 21/44 (47%) Frame = +1 Query: 298 LWRLIQPWSQLCIRDIIVGVVQCSTGGYLHSGGHNWDGVYETEE 429 +WR Q SQ+C I +G + HS G + DGV + E Sbjct: 265 IWRTSQLVSQICNMPIPANKAIVGSGAFAHSSGIHQDGVLKNRE 308
>LEU1_ECOLI (P09151) 2-isopropylmalate synthase (EC 2.3.3.13)| (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) Length = 522 Score = 30.8 bits (68), Expect = 2.9 Identities = 15/44 (34%), Positives = 21/44 (47%) Frame = +1 Query: 298 LWRLIQPWSQLCIRDIIVGVVQCSTGGYLHSGGHNWDGVYETEE 429 +WR Q SQ+C I +G + HS G + DGV + E Sbjct: 265 IWRTSQLVSQICNMPIPANKAIVGSGAFAHSSGIHQDGVLKNRE 308
>LEU1_ECOL6 (Q8FL75) 2-isopropylmalate synthase (EC 2.3.3.13)| (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) Length = 522 Score = 30.8 bits (68), Expect = 2.9 Identities = 15/44 (34%), Positives = 21/44 (47%) Frame = +1 Query: 298 LWRLIQPWSQLCIRDIIVGVVQCSTGGYLHSGGHNWDGVYETEE 429 +WR Q SQ+C I +G + HS G + DGV + E Sbjct: 265 IWRTSQLVSQICNMPIPANKAIVGSGAFAHSSGIHQDGVLKNRE 308
>LEU1_ECO57 (Q8X9Z8) 2-isopropylmalate synthase (EC 2.3.3.13)| (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) Length = 522 Score = 30.8 bits (68), Expect = 2.9 Identities = 15/44 (34%), Positives = 21/44 (47%) Frame = +1 Query: 298 LWRLIQPWSQLCIRDIIVGVVQCSTGGYLHSGGHNWDGVYETEE 429 +WR Q SQ+C I +G + HS G + DGV + E Sbjct: 265 IWRTSQLVSQICNMPIPANKAIVGSGAFAHSSGIHQDGVLKNRE 308
>RYR2_RABIT (P30957) Ryanodine receptor 2 (Cardiac muscle-type ryanodine| receptor) (RyR2) (RYR-2) (Cardiac muscle ryanodine receptor-calcium release channel) Length = 4969 Score = 30.8 bits (68), Expect = 2.9 Identities = 33/153 (21%), Positives = 65/153 (42%), Gaps = 12/153 (7%) Frame = +2 Query: 23 KTLAKIRMGGANGAKAYGAVVLIRVMYSGMHI---------MSKIALDQGMNPFVFVFYR 175 K + K GG + YG +L+R YSGM++ K+A D G+ Sbjct: 99 KFMMKTAQGGGHRTLLYGHAILLRHSYSGMYLCCLSTSRSSTDKLAFDVGLQ-------E 151 Query: 176 HTTAALVLIPIAFALERQKTKPVTLKIAGKMFVHALYGVTACGVLFNLGLNYASATSSSA 355 TT I A +Q+++ +++ + + ++ + + G + A Sbjct: 152 DTTGEACWWTIHPA-SKQRSEGEKVRVGDDLILVSVSSERYLHLSYGNGSLHVDAAFQQT 210 Query: 356 LYNVQPVVTFILAV---IIGMESMKLKKLHGNL 445 L++V P+ + A +IG + ++L LHG++ Sbjct: 211 LWSVAPISSGSEAAQGYLIGGDVLRL--LHGHM 241
>Y878_HAEIN (P71360) Hypothetical transport protein HI0878| Length = 306 Score = 30.8 bits (68), Expect = 2.9 Identities = 23/98 (23%), Positives = 47/98 (47%) Frame = +2 Query: 146 MNPFVFVFYRHTTAALVLIPIAFALERQKTKPVTLKIAGKMFVHALYGVTACGVLFNLGL 325 MN V+YR AA+ L+ + A ++Q + + ++ + + + G+T+ +LF+ L Sbjct: 33 MNAQTIVWYRFIIAAVSLLAL-LAYKKQLPELMKVRQYAWIMLIGVIGLTSNFLLFSSSL 91 Query: 326 NYASATSSSALYNVQPVVTFILAVIIGMESMKLKKLHG 439 NY + + ++ I V+I E + L + G Sbjct: 92 NYIEPSVAQIFIHLSSFGMLICGVLIFKEKLGLHQKIG 129
>SIRB2_SALTY (P0A237) Protein sirB2| Length = 129 Score = 30.0 bits (66), Expect = 4.9 Identities = 19/68 (27%), Positives = 31/68 (45%) Frame = +2 Query: 230 KTKPVTLKIAGKMFVHALYGVTACGVLFNLGLNYASATSSSALYNVQPVVTFILAVIIGM 409 KT + +G L+GV VL + L+Y A S A + P+ +L +II + Sbjct: 61 KTHILPFTESGSWLTEKLFGVIIYIVLGFIALDYRQARSQQARFIAFPLALVVLYIIIKL 120 Query: 410 ESMKLKKL 433 + K+ L Sbjct: 121 ATTKIPLL 128
>SIRB2_SALTI (P0A238) Protein sirB2| Length = 129 Score = 30.0 bits (66), Expect = 4.9 Identities = 19/68 (27%), Positives = 31/68 (45%) Frame = +2 Query: 230 KTKPVTLKIAGKMFVHALYGVTACGVLFNLGLNYASATSSSALYNVQPVVTFILAVIIGM 409 KT + +G L+GV VL + L+Y A S A + P+ +L +II + Sbjct: 61 KTHILPFTESGSWLTEKLFGVIIYIVLGFIALDYRQARSQQARFIAFPLALVVLYIIIKL 120 Query: 410 ESMKLKKL 433 + K+ L Sbjct: 121 ATTKIPLL 128
>OPSG2_CARAU (P32312) Green-sensitive opsin-2 (Green cone photoreceptor pigment| 2) Length = 349 Score = 30.0 bits (66), Expect = 4.9 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 8/65 (12%) Frame = +2 Query: 221 ERQKTKPVTLKIAGKMFVHALYGVTACGVLFNLGLNYASA--------TSSSALYNVQPV 376 ER+ TK V L + G + Y A + FN G +++ + +SALYN PV Sbjct: 247 EREVTKMVILMVLGFLVAWTPYATVAAWIFFNKGAAFSAQFMAIPAFFSKTSALYN--PV 304 Query: 377 VTFIL 391 + +L Sbjct: 305 IYVLL 309
>ARO1_SCHPO (Q9P7R0) Pentafunctional AROM polypeptide [Includes:| 3-dehydroquinate synthase (EC 4.2.3.4); 3-dehydroquinate dehydratase (EC 4.2.1.10) (3-dehydroquinase); Shikimate dehydrogenase (EC 1.1.1.25); Shikimate kinase (EC 2.7.1.71); 3-phosphoshikima Length = 1573 Score = 29.6 bits (65), Expect = 6.4 Identities = 13/45 (28%), Positives = 24/45 (53%) Frame = +2 Query: 233 TKPVTLKIAGKMFVHALYGVTACGVLFNLGLNYASATSSSALYNV 367 ++PVTLK+ G + LY ++ + G+N +T+ YN+ Sbjct: 583 SQPVTLKLVGGKPISQLYIDMTIAMMASFGVNVTKSTTEENTYNI 627
>Y1405_STAS1 (Q49XE7) UPF0078 membrane protein SSP1405| Length = 202 Score = 29.6 bits (65), Expect = 6.4 Identities = 18/56 (32%), Positives = 26/56 (46%) Frame = +2 Query: 332 ASATSSSALYNVQPVVTFILAVIIGMESMKLKKLHGNLKVAGILCCVAGVTVLAFY 499 A ATS+ + V PV+ ILA I + L K + +CCV G ++ Y Sbjct: 113 AVATSAGVILGVNPVLLLILAAIF-FGILYLTKYVSLSSIIASICCVIGALLIRDY 167
>5HT4R_RAT (Q62758) 5-hydroxytryptamine 4 receptor (5-HT-4) (Serotonin| receptor 4) (5-HT4) Length = 406 Score = 29.6 bits (65), Expect = 6.4 Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 8/90 (8%) Frame = +2 Query: 134 LDQGMNPFVFVFYRHTTAALVLIPIAFALERQKTKPV--------TLKIAGKMFVHALYG 289 ++ G+NPF++ F + LI + ER K P+ T I G H L Sbjct: 303 INSGLNPFLYAFLNKSFRRAFLIILCCDDERYKRPPILGQTVPCSTTTINGS--THVLRD 360 Query: 290 VTACGVLFNLGLNYASATSSSALYNVQPVV 379 CG + + T++S L QPV+ Sbjct: 361 TVECGGQWE---SRCHLTATSPLVAAQPVI 387
>Y355_SYNY3 (P74436) Hypothetical transport protein sll0355| Length = 330 Score = 29.6 bits (65), Expect = 6.4 Identities = 29/140 (20%), Positives = 62/140 (44%) Frame = +2 Query: 152 PFVFVFYRHTTAALVLIPIAFALERQKTKPVTLKIAGKMFVHALYGVTACGVLFNLGLNY 331 PF R A ++++ +A+ +++ +P + G + + AL T GL Sbjct: 40 PFFVATVRLIPAGILVL--LWAMGQKRPQPQNWQGWGWIILFALVDGTLFQGFLAQGLER 97 Query: 332 ASATSSSALYNVQPVVTFILAVIIGMESMKLKKLHGNLKVAGILCCVAGVTVLAFYEGPM 511 A S + + QP+ +L+ S K++ G + G+L V G++++ + Sbjct: 98 TGAGLGSVIIDSQPIAVALLS------SWLFKEVIGGIGWLGLLLGVGGISLIGLPDEWF 151 Query: 512 FRSFDHHRLFQHGSGSSSGA 571 ++ + L + SGS+ G+ Sbjct: 152 YQLWHLQGLSINWSGSALGS 171
>OPSG4_BRARE (Q9W6A6) Green-sensitive opsin-4 (Green cone photoreceptor pigment| 4) (Opsin-1, medium-wave-sensitive 4) (Opsin RH2-4) Length = 349 Score = 29.3 bits (64), Expect = 8.3 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 8/65 (12%) Frame = +2 Query: 221 ERQKTKPVTLKIAGKMFVHALYGVTACGVLFNLGLNYASA--------TSSSALYNVQPV 376 ER+ T+ V L + G + Y A + FN G +++ + +SALYN PV Sbjct: 247 EREVTRMVILMVLGFLIAWTPYATVAAWIFFNKGAAFSAQFMAVPAFFSKTSALYN--PV 304 Query: 377 VTFIL 391 + +L Sbjct: 305 IYVLL 309 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 84,168,865 Number of Sequences: 219361 Number of extensions: 1813906 Number of successful extensions: 5255 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 5069 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5254 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4815021120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
