Clone Information

BLAST Search Result

Clone Name	bart57a08
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RL3_ORYSA (P35684) 60S ribosomal protein L3	310	2e-84
2	RL3A_ARATH (P17094) 60S ribosomal protein L3	283	3e-76
3	RL3B_ARATH (P22738) 60S ribosomal protein L3	278	9e-75
4	RL3_RAT (P21531) 60S ribosomal protein L3 (L4)	244	8e-65
5	RL3_MOUSE (P27659) 60S ribosomal protein L3 (J1 protein)	244	8e-65
6	RL3_HUMAN (P39023) 60S ribosomal protein L3 (HIV-1 TAR RNA-bindi...	242	4e-64
7	RL3_BOVIN (P39872) 60S ribosomal protein L3	241	9e-64
8	RL3B_SCHPO (P36584) 60S ribosomal protein L3-B	240	2e-63
9	RL3A_SCHPO (P40372) 60S ribosomal protein L3-A	239	3e-63
10	RL3_MACFA (Q4R5Q0) 60S ribosomal protein L3	239	3e-63
11	RL3_ASPFU (Q8NKF4) 60S ribosomal protein L3 (Allergen Asp f 23)	233	2e-61
12	RL3_NEUCR (P59671) 60S ribosomal protein L3	231	9e-61
13	RL3_CAEEL (P50880) 60S ribosomal protein L3	229	5e-60
14	RL3_DROME (O16797) 60S ribosomal protein L3	228	1e-59
15	RL3_DICDI (P34113) 60S ribosomal protein L3	227	2e-59
16	RL3_TOXCA (P49149) 60S ribosomal protein L3	226	2e-59
17	RL3_CAEBR (Q9NBK4) 60S ribosomal protein L3	226	2e-59
18	RL3_DEBHA (Q6BXM5) 60S ribosomal protein L3	226	3e-59
19	RL3_CANGA (Q6FTJ2) 60S ribosomal protein L3	224	1e-58
20	RL3_KLULA (Q6CJR7) 60S ribosomal protein L3	222	6e-58
21	RL3_YEAST (P14126) 60S ribosomal protein L3 (YL1) (RP1) (Mainten...	218	8e-57
22	RL3L_HUMAN (Q92901) 60S ribosomal protein L3-like	214	1e-55
23	RL3L_BOVIN (Q3SZ10) 60S ribosomal protein L3-like	214	2e-55
24	RL3_ASHGO (Q759R7) 60S ribosomal protein L3	208	6e-54
25	RL3_ENCCU (Q8SQI3) 60S ribosomal protein L3	120	2e-27
26	RL3_METTH (O26110) 50S ribosomal protein L3P	91	2e-18
27	RL3_AERPE (Q9YFM2) 50S ribosomal protein L3P	91	3e-18
28	RL3_HALMA (P20279) 50S ribosomal protein L3P (Hmal3) (Hl1)	87	2e-17
29	RL3_PYRKO (Q5JDJ0) 50S ribosomal protein L3P	84	2e-16
30	RL3_METVA (Q9UWG2) 50S ribosomal protein L3P	84	2e-16
31	RL3_ARCFU (O28354) 50S ribosomal protein L3P	83	4e-16
32	RL3_HALSA (Q9HPD4) 50S ribosomal protein L3P	82	9e-16
33	RL3_SULTO (Q975I1) 50S ribosomal protein L3P	81	2e-15
34	RL3_METKA (Q8TY90) 50S ribosomal protein L3P	80	3e-15
35	RL3_SULAC (Q4JB40) 50S ribosomal protein L3P	80	5e-15
36	RL3_PYRFU (Q8TZZ8) 50S ribosomal protein L3P	77	4e-14
37	RL3_PYRHO (O59418) 50S ribosomal protein L3P	77	4e-14
38	RL3_PYRAE (Q8ZW52) 50S ribosomal protein L3P	76	7e-14
39	RL3_PYRAB (Q9V1T5) 50S ribosomal protein L3P	76	7e-14
40	RL3_SULSO (Q9UXA8) 50S ribosomal protein L3P	75	9e-14
41	RL3_METJA (P54014) 50S ribosomal protein L3P	75	1e-13
42	RL3_NANEQ (P60458) 50S ribosomal protein L3P	73	6e-13
43	RL3_METAC (Q8TRU7) 50S ribosomal protein L3P	73	6e-13
44	RL3_METMA (Q8PV50) 50S ribosomal protein L3P	70	3e-12
45	RL3_THEVO (Q97BX7) 50S ribosomal protein L3P	56	5e-08
46	RL3_THEAC (Q9HIQ9) 50S ribosomal protein L3P	55	1e-07
47	RO22_XENLA (P51990) Heterogeneous nuclear ribonucleoprotein A2 h...	35	0.13
48	APC_XENLA (P70039) Adenomatous polyposis coli homolog (Protein APC)	33	0.64
49	K1C10_HUMAN (P13645) Keratin, type I cytoskeletal 10 (Cytokerati...	32	0.83
50	INO80_GIBZE (Q4IL82) Putative DNA helicase INO80 (EC 3.6.1.-)	32	0.83
51	NYX_MOUSE (P83503) Nyctalopin precursor	31	1.9
52	NYX_HUMAN (Q9GZU5) Nyctalopin precursor	31	1.9
53	FIBA1_PETMA (P02674) Fibrinogen alpha-1 chain precursor [Contain...	31	2.4
54	COTG_BACSU (P39801) Spore coat protein G	30	4.1
55	CRUM2_MOUSE (Q80YA8) Crumbs homolog 2 (Crumbs-like protein 2) (F...	30	5.4
56	PHF2_MOUSE (Q9WTU0) PHD finger protein 2 (GRC5)	29	7.1
57	SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains prote...	29	7.1
58	YHJD_DICD3 (P45417) Hypothetical 36.0 kDa protein in kdgK 5'regi...	29	9.2
59	IL6RA_HUMAN (P08887) Interleukin-6 receptor alpha chain precurso...	29	9.2

>RL3_ORYSA (P35684) 60S ribosomal protein L3|
          Length = 388

 Score =  310 bits (794), Expect = 2e-84
 Identities = 147/155 (94%), Positives = 152/155 (98%)
 Frame = +2

Query: 68  SHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVE 247
           SHRKFEHPRHGSLGFLPRKR SRHRGKVKSFPKDD  KPCHLT+F+GYKAGMTHIVREVE
Sbjct: 1   SHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVSKPCHLTSFVGYKAGMTHIVREVE 60

Query: 248 KPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKN 427
           KPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLR+LNSVWAQHLSE+VRRRFYKN
Sbjct: 61  KPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYKN 120

Query: 428 WCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKY 532
           WCKSKKKAFTKYALKYDSDAGKKEIQ+QLEKMKKY
Sbjct: 121 WCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKY 155

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>RL3A_ARATH (P17094) 60S ribosomal protein L3|
          Length = 388

 Score =  283 bits (723), Expect = 3e-76
 Identities = 133/155 (85%), Positives = 144/155 (92%)
 Frame = +2

Query: 68  SHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVE 247
           SHRKFEHPRHGSLGFLPRKR +RHRGKVK+FPKDDQ KPC  TAF+GYKAGMTHIVREVE
Sbjct: 1   SHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREVE 60

Query: 248 KPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKN 427
           KPGSKLHKKETCEAVTIIETP +V+VG+VAYVKTPRGLR+LN+VWAQHLSE+VRRRFYKN
Sbjct: 61  KPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYKN 120

Query: 428 WCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKY 532
           W KSKKKAFT YA +YDS+ GKK IQ QLEKMKKY
Sbjct: 121 WAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKY 155

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>RL3B_ARATH (P22738) 60S ribosomal protein L3|
          Length = 389

 Score =  278 bits (710), Expect = 9e-75
 Identities = 128/155 (82%), Positives = 145/155 (93%)
 Frame = +2

Query: 68  SHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVE 247
           SHRKFEHPRHGSLGFLPRKR SRHRGKVK+FPKDD  KPC LT+FLGYKAGMTHIVR+VE
Sbjct: 1   SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTSFLGYKAGMTHIVRDVE 60

Query: 248 KPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKN 427
           KPGSKLHKKETCEAVTIIETPP+V+VG+V YVKTPRGLR+L +VWAQHLSE++RRRFYKN
Sbjct: 61  KPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLCTVWAQHLSEELRRRFYKN 120

Query: 428 WCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKY 532
           W KSKKKAFT+Y+ K++++ GKK+IQ QLEKMKKY
Sbjct: 121 WAKSKKKAFTRYSKKHETEEGKKDIQSQLEKMKKY 155

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>RL3_RAT (P21531) 60S ribosomal protein L3 (L4)|
          Length = 402

 Score =  244 bits (624), Expect = 8e-65
 Identities = 112/155 (72%), Positives = 132/155 (85%)
 Frame = +2

Query: 68  SHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVE 247
           SHRKF  PRHGSLGFLPRKR SRHRGKVKSFPKDD  KP HLTAFLGYKAGMTHIVREV+
Sbjct: 1   SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVD 60

Query: 248 KPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKN 427
           +PGSK++KKE  EAVTI+ETPP+V+VG+V YV+TPRGLRT  +V+A+H+S++ +RRFYKN
Sbjct: 61  RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKN 120

Query: 428 WCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKY 532
           W KSKKKAFTKY  K+  D GKK+++     MKKY
Sbjct: 121 WHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKY 155

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>RL3_MOUSE (P27659) 60S ribosomal protein L3 (J1 protein)|
          Length = 402

 Score =  244 bits (624), Expect = 8e-65
 Identities = 112/155 (72%), Positives = 132/155 (85%)
 Frame = +2

Query: 68  SHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVE 247
           SHRKF  PRHGSLGFLPRKR SRHRGKVKSFPKDD  KP HLTAFLGYKAGMTHIVREV+
Sbjct: 1   SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREVD 60

Query: 248 KPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKN 427
           +PGSK++KKE  EAVTI+ETPP+V+VG+V YV+TPRGLRT  +V+A+H+S++ +RRFYKN
Sbjct: 61  RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKN 120

Query: 428 WCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKY 532
           W KSKKKAFTKY  K+  D GKK+++     MKKY
Sbjct: 121 WHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKY 155

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>RL3_HUMAN (P39023) 60S ribosomal protein L3 (HIV-1 TAR RNA-binding protein B)|
           (TARBP-B)
          Length = 402

 Score =  242 bits (618), Expect = 4e-64
 Identities = 111/155 (71%), Positives = 132/155 (85%)
 Frame = +2

Query: 68  SHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVE 247
           SHRKF  PRHGSLGFLPRKR SRHRGKVKSFPKDD  KP HLTAFLGYKAGMTHIVREV+
Sbjct: 1   SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVD 60

Query: 248 KPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKN 427
           +PGSK++KKE  EAVTI+ETPP+V+VG+V YV+TPRGLRT  +V+A+H+S++ +RRFYKN
Sbjct: 61  RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKN 120

Query: 428 WCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKY 532
           W KSKKKAFTKY  K+  + GKK+++     MKKY
Sbjct: 121 WHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKY 155

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>RL3_BOVIN (P39872) 60S ribosomal protein L3|
          Length = 402

 Score =  241 bits (615), Expect = 9e-64
 Identities = 111/155 (71%), Positives = 131/155 (84%)
 Frame = +2

Query: 68  SHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVE 247
           SHRKF  PRHGSLGFLPRKR SRHRGKVKSFPKDD  KP HLTAFLGYKAGMTHIVREV+
Sbjct: 1   SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREVD 60

Query: 248 KPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKN 427
           +PGSK++KKE  EAVTI+ETPP+VIVG+V YV+TPRGLRT  +++A+H+S++ +RRFYKN
Sbjct: 61  RPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYKN 120

Query: 428 WCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKY 532
           W KSKKKAFTKY  K+    GKK+++     MKKY
Sbjct: 121 WHKSKKKAFTKYCKKWQDADGKKQLERDFSSMKKY 155

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>RL3B_SCHPO (P36584) 60S ribosomal protein L3-B|
          Length = 387

 Score =  240 bits (612), Expect = 2e-63
 Identities = 113/155 (72%), Positives = 133/155 (85%)
 Frame = +2

Query: 68  SHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVE 247
           SH KFE PRHGSLGFLPRKR SR RGKVK+FPKDD  KP HLTAFLGYKAGMTHIVR+++
Sbjct: 1   SHCKFEQPRHGSLGFLPRKRASRQRGKVKAFPKDDASKPVHLTAFLGYKAGMTHIVRDLD 60

Query: 248 KPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKN 427
           +PGSK+HK+E  EAVTIIETPP+V+VG+V YV+TPRGLR+L +VWA+HLSE+V+RRFYKN
Sbjct: 61  RPGSKMHKREILEAVTIIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVKRRFYKN 120

Query: 428 WCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKY 532
           W KSKKKAFTKYA KY      + I  +LE++KKY
Sbjct: 121 WFKSKKKAFTKYAKKYAEST--QSINRELERIKKY 153

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>RL3A_SCHPO (P40372) 60S ribosomal protein L3-A|
          Length = 387

 Score =  239 bits (611), Expect = 3e-63
 Identities = 112/155 (72%), Positives = 133/155 (85%)
 Frame = +2

Query: 68  SHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVE 247
           SH KFE PRHGSLGFLPRKR SR RGKVK+FPKDD  KP HLTAFLGYKAGMTHIVR+++
Sbjct: 1   SHCKFEQPRHGSLGFLPRKRASRQRGKVKAFPKDDASKPVHLTAFLGYKAGMTHIVRDLD 60

Query: 248 KPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKN 427
           +PGSK+HK+E  EAVT+IETPP+V+VG+V YV+TPRGLR+L +VWA+HLSE+V+RRFYKN
Sbjct: 61  RPGSKMHKREILEAVTVIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVKRRFYKN 120

Query: 428 WCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKY 532
           W KSKKKAFTKYA KY      + I  +LE++KKY
Sbjct: 121 WFKSKKKAFTKYAKKYAEST--QSINRELERIKKY 153

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>RL3_MACFA (Q4R5Q0) 60S ribosomal protein L3|
          Length = 402

 Score =  239 bits (611), Expect = 3e-63
 Identities = 110/155 (70%), Positives = 131/155 (84%)
 Frame = +2

Query: 68  SHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVE 247
           SHRKF  PRHGSLGFLPRKR SRHRGKVKSFPKDD  KP HLTAFLGYKAGMTHIVREV+
Sbjct: 1   SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVD 60

Query: 248 KPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKN 427
           +PGSK++KKE   AVTI+ETPP+V+VG+V YV+TPRGLRT  +V+A+H+S++ +RRFYKN
Sbjct: 61  RPGSKVNKKEVVVAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKN 120

Query: 428 WCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKY 532
           W KSKKKAFTKY  K+  + GKK+++     MKKY
Sbjct: 121 WHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKY 155

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>RL3_ASPFU (Q8NKF4) 60S ribosomal protein L3 (Allergen Asp f 23)|
          Length = 392

 Score =  233 bits (595), Expect = 2e-61
 Identities = 109/156 (69%), Positives = 134/156 (85%)
 Frame = +2

Query: 65  MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 244
           MSHRK+E PRHGSL FLPRKR +RHRGKVKSFPKDD +KP HLTA +GYKAGMT +VR++
Sbjct: 1   MSHRKYEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTASMGYKAGMTTVVRDL 60

Query: 245 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 424
           ++PG+K+HKKE  EAVTIIETPPLV VG+V Y++TPRGLR+L +VWA+HLS++V+RRFYK
Sbjct: 61  DRPGAKMHKKEIVEAVTIIETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 425 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKY 532
           NW KSKKKAFTKYA K+  + G   I  +LE++KKY
Sbjct: 121 NWYKSKKKAFTKYAKKHAEENG-ASITRELERIKKY 155

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>RL3_NEUCR (P59671) 60S ribosomal protein L3|
          Length = 392

 Score =  231 bits (589), Expect = 9e-61
 Identities = 107/156 (68%), Positives = 133/156 (85%)
 Frame = +2

Query: 65  MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 244
           MSHRK+E PRHGSL +LPRKR +RHRGKVKSFPKDD +KP HLTA +GYKAGMT IVR++
Sbjct: 1   MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDAKKPVHLTAAMGYKAGMTTIVRDL 60

Query: 245 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 424
           ++PG+K HKKE  EAVTII+TPP+++VGLV Y++TPRGLR+L +VWA+HLS++V+RRFYK
Sbjct: 61  DRPGAKAHKKEVVEAVTIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 425 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKY 532
           NW KSKKKAFTKY  K+ SD     I  +LE++KKY
Sbjct: 121 NWYKSKKKAFTKYVKKH-SDNNGAAITRELERIKKY 155

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>RL3_CAEEL (P50880) 60S ribosomal protein L3|
          Length = 401

 Score =  229 bits (583), Expect = 5e-60
 Identities = 103/156 (66%), Positives = 126/156 (80%)
 Frame = +2

Query: 65  MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 244
           MSHRKF  PRHG +GF P+KR   +RG++K+FPKDD+ KP HLTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60

Query: 245 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 424
           +KPGSK++KKE  EAVTI+ETPP+VI G+  YV TP+G R L ++WA+HLSE+ RRRFY 
Sbjct: 61  DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYS 120

Query: 425 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKY 532
           NW KSKKKAFTKYA K+  + GKK I+    K+KKY
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKY 156

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>RL3_DROME (O16797) 60S ribosomal protein L3|
          Length = 415

 Score =  228 bits (580), Expect = 1e-59
 Identities = 103/155 (66%), Positives = 125/155 (80%)
 Frame = +2

Query: 68  SHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVE 247
           SHRKF  PRHGS+ F P+KR +RHRGKVK+FPKDD  KP HLT F+GYKAGMTHIVRE +
Sbjct: 1   SHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREAD 60

Query: 248 KPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKN 427
           +PGSK++KKE  EAVT++ETPP+++VG V Y++TP GLR L +VWAQHLSE+ RRRFYKN
Sbjct: 61  RPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 120

Query: 428 WCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKY 532
           W KSKKKAFTK + K+  D GKK I+    KM +Y
Sbjct: 121 WYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRY 155

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>RL3_DICDI (P34113) 60S ribosomal protein L3|
          Length = 397

 Score =  227 bits (578), Expect = 2e-59
 Identities = 106/155 (68%), Positives = 130/155 (83%), Gaps = 1/155 (0%)
 Frame = +2

Query: 68  SHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVE 247
           SHRKFE PRHG+LGF PRKR +RH+GKVKSFPKDD+ +  HLTAF+GYKAGMTH+VR++E
Sbjct: 1   SHRKFEAPRHGNLGFRPRKRAARHQGKVKSFPKDDRTQKVHLTAFMGYKAGMTHVVRDLE 60

Query: 248 KPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKN 427
           KPGSK+HKKE  EAVTIIE PP+ IVGLV YV+T +GL+T  +VWAQHLS++ RRR YKN
Sbjct: 61  KPGSKMHKKEIVEAVTIIECPPMYIVGLVGYVETAQGLKTYKTVWAQHLSDNFRRRLYKN 120

Query: 428 WCKSK-KKAFTKYALKYDSDAGKKEIQLQLEKMKK 529
           W KSK KKAFTKY  +Y+++ GKK I+  L+ +KK
Sbjct: 121 WYKSKSKKAFTKYVKQYETEEGKKSIEASLQAIKK 155

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>RL3_TOXCA (P49149) 60S ribosomal protein L3|
          Length = 401

 Score =  226 bits (577), Expect = 2e-59
 Identities = 105/155 (67%), Positives = 123/155 (79%)
 Frame = +2

Query: 68  SHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVE 247
           SHRKF  PRHGS+GF P+KR  RHRGKVK+FPKDD  KP HLTAF+ +KAGMTHIVREV+
Sbjct: 1   SHRKFSAPRHGSMGFTPKKRSKRHRGKVKAFPKDDPTKPIHLTAFIAFKAGMTHIVREVD 60

Query: 248 KPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKN 427
           KPGSK++KKE  EAVTI E PP+VIVG+V Y+ TPRG R   +VWA+HLSED R RFYKN
Sbjct: 61  KPGSKVNKKEVVEAVTIFEAPPMVIVGIVGYIDTPRGPRQFKTVWAEHLSEDCRGRFYKN 120

Query: 428 WCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKY 532
           W  SKKKAF K+A K+  + G+K I+  L KMKKY
Sbjct: 121 WHTSKKKAFQKHAKKWQDEDGRKSIEADLNKMKKY 155

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>RL3_CAEBR (Q9NBK4) 60S ribosomal protein L3|
          Length = 401

 Score =  226 bits (577), Expect = 2e-59
 Identities = 102/156 (65%), Positives = 125/156 (80%)
 Frame = +2

Query: 65  MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 244
           MSHRKF  PRHG +GF P+KR   +RG++K+FPKDD  KP HLTAFLGYKAGMTHIVR+V
Sbjct: 1   MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDASKPIHLTAFLGYKAGMTHIVRDV 60

Query: 245 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 424
           +KPGSK++KKE  EAV+IIETPP+VI G+  Y+ TP+G R L ++WA+HLSE+ RRRFY 
Sbjct: 61  DKPGSKVNKKEVVEAVSIIETPPMVIAGVTGYIDTPQGPRALTTIWAEHLSEEARRRFYS 120

Query: 425 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKY 532
           NW KSKKKAFTKYA K+  + GKK I+    K+KKY
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKY 156

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>RL3_DEBHA (Q6BXM5) 60S ribosomal protein L3|
          Length = 389

 Score =  226 bits (576), Expect = 3e-59
 Identities = 104/156 (66%), Positives = 132/156 (84%)
 Frame = +2

Query: 65  MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 244
           MSHRK+E PRHGSLGFLPRKR +  RG+VKSFPKD + KP  LTAFLGYKAGMT +VR++
Sbjct: 1   MSHRKYEAPRHGSLGFLPRKRSANIRGRVKSFPKDVKSKPVALTAFLGYKAGMTTVVRDL 60

Query: 245 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 424
           ++PGSK+HK+E  EA T+++TPPLV+VG+V YV+TPRGLR+L +VWA+HLSE+VRRRFYK
Sbjct: 61  DRPGSKMHKREIVEAATVVDTPPLVVVGVVGYVETPRGLRSLTTVWAEHLSEEVRRRFYK 120

Query: 425 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKY 532
           NW KSKKKAFTKY+ KY  D    +++ +L ++KKY
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDGA--QVERELARIKKY 154

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>RL3_CANGA (Q6FTJ2) 60S ribosomal protein L3|
          Length = 387

 Score =  224 bits (570), Expect = 1e-58
 Identities = 103/156 (66%), Positives = 132/156 (84%)
 Frame = +2

Query: 65  MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 244
           MSHRK+E PRHG LGFLPRKR +  RG+VKSFPKDD+ KP  LT+FLGYKAGMT IVR++
Sbjct: 1   MSHRKYEAPRHGHLGFLPRKRAASVRGRVKSFPKDDKSKPVALTSFLGYKAGMTTIVRDL 60

Query: 245 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 424
           ++PGSK HK+E  EAVT+++TPP+V+VG+V YV+TPRGLR+L +VWA+HLS++V+RRFYK
Sbjct: 61  DRPGSKFHKREIVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 425 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKY 532
           NW KSKKKAFTKY+ KY  +    EI+ +L ++KKY
Sbjct: 121 NWYKSKKKAFTKYSAKYAQNGA--EIERELARIKKY 154

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>RL3_KLULA (Q6CJR7) 60S ribosomal protein L3|
          Length = 387

 Score =  222 bits (565), Expect = 6e-58
 Identities = 101/156 (64%), Positives = 131/156 (83%)
 Frame = +2

Query: 65  MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 244
           MSHRK+E PRHG LGFLPRKR +  RG+VKSFPKDDQ KP  LT+FLGYKAGM+ IVR++
Sbjct: 1   MSHRKYEAPRHGHLGFLPRKRAASVRGRVKSFPKDDQTKPVALTSFLGYKAGMSTIVRDL 60

Query: 245 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 424
           ++PGSK HK+E  EAVT+++TPP+V+VG+V YV+TPRGLR+L +VWA+HLS++V+RRFYK
Sbjct: 61  DRPGSKFHKREVVEAVTVVDTPPIVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120

Query: 425 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKY 532
           NW KSKKKAFTKY+ KY  +    ++  +L ++KKY
Sbjct: 121 NWYKSKKKAFTKYSAKYAENGA--QVDRELARIKKY 154

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>RL3_YEAST (P14126) 60S ribosomal protein L3 (YL1) (RP1) (Maintenance of|
           killer protein 8) (Trichodermin resistance protein)
          Length = 386

 Score =  218 bits (555), Expect = 8e-57
 Identities = 100/155 (64%), Positives = 129/155 (83%)
 Frame = +2

Query: 68  SHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVE 247
           SHRK+E PRHG LGFLPRKR +  R +VK+FPKDD+ KP  LT+FLGYKAGMT IVR+++
Sbjct: 1   SHRKYEAPRHGHLGFLPRKRAASIRARVKAFPKDDRSKPVALTSFLGYKAGMTTIVRDLD 60

Query: 248 KPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKN 427
           +PGSK HK+E  EAVT+++TPP+V+VG+V YV+TPRGLR+L +VWA+HLS++V+RRFYKN
Sbjct: 61  RPGSKFHKREVVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKN 120

Query: 428 WCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKY 532
           W KSKKKAFTKY+ KY  D     I+ +L ++KKY
Sbjct: 121 WYKSKKKAFTKYSAKYAQDGA--GIERELARIKKY 153

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>RL3L_HUMAN (Q92901) 60S ribosomal protein L3-like|
          Length = 406

 Score =  214 bits (545), Expect = 1e-55
 Identities = 99/155 (63%), Positives = 122/155 (78%)
 Frame = +2

Query: 68  SHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVE 247
           SHRKF  PRHG LGFLP KR  RHRGKVK++P+DD  +P HLTAFLGYKAGMTH +REV 
Sbjct: 1   SHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREVH 60

Query: 248 KPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKN 427
           +PG K+ K+E  EAVTI+ETPPLV+VG+V YV TPRGLR+  +++A+HLS++ RRRFYK+
Sbjct: 61  RPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYKD 120

Query: 428 WCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKY 532
           W KSKKKAFTK   ++    GKK++Q     MKKY
Sbjct: 121 WHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKY 155

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>RL3L_BOVIN (Q3SZ10) 60S ribosomal protein L3-like|
          Length = 406

 Score =  214 bits (544), Expect = 2e-55
 Identities = 99/155 (63%), Positives = 122/155 (78%)
 Frame = +2

Query: 68  SHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVE 247
           SHRKF  PRHG LGFLP KR  RHRGKVK++P+DD  +P HLTAFLGYKAGMTH +REV 
Sbjct: 1   SHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREVH 60

Query: 248 KPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKN 427
           +PG K+ K+E  EAVTI+ETPPLV+VG+V YV TPRGLR+  +++A+HLS++ RRRFYK+
Sbjct: 61  RPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYKD 120

Query: 428 WCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKY 532
           W KSKKKAFTK   ++    GKK++Q     MKKY
Sbjct: 121 WHKSKKKAFTKACKRWRDADGKKQLQKDFAAMKKY 155

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>RL3_ASHGO (Q759R7) 60S ribosomal protein L3|
          Length = 388

 Score =  208 bits (530), Expect = 6e-54
 Identities = 95/156 (60%), Positives = 128/156 (82%)
 Frame = +2

Query: 65  MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 244
           MSHRK+E PRHG LGFLPRKR +  RG+VK+FPKDD+ KP  LT+FLGYKAGMT IVR++
Sbjct: 1   MSHRKYEAPRHGHLGFLPRKRAASIRGRVKAFPKDDKSKPVALTSFLGYKAGMTTIVRDL 60

Query: 245 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 424
           ++PGSK HK+E  EAV++++TPP+V+VG+V Y++TPRGLR+L +VWA+HLS++++RRFYK
Sbjct: 61  DRPGSKFHKREIVEAVSVVDTPPMVVVGVVGYIETPRGLRSLTTVWAEHLSDEIKRRFYK 120

Query: 425 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKY 532
           NW KSKKKAFT+      +  G   I+ +L ++KKY
Sbjct: 121 NWYKSKKKAFTQVPPPSTAQDG-AAIERELARIKKY 155

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>RL3_ENCCU (Q8SQI3) 60S ribosomal protein L3|
          Length = 383

 Score =  120 bits (301), Expect = 2e-27
 Identities = 63/130 (48%), Positives = 83/130 (63%), Gaps = 1/130 (0%)
 Frame = +2

Query: 65  MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVR-E 241
           MS RKF  PRHGSL F PRKR    R    +FP DD+ +P HLT F+ YKAGMTH+VR +
Sbjct: 1   MSCRKFNAPRHGSLQFCPRKRSKTIRPAAGAFPADDRSQPVHLTGFMAYKAGMTHVVRTK 60

Query: 242 VEKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFY 421
            +   +K   +E  +AVT++E PP+V+ G+V Y KT  GLR L  V A ++S+ V RR +
Sbjct: 61  TQVAKNKQLSREIMDAVTVLEAPPMVVYGIVGYEKTVTGLRRLPIVTAAYVSDGVLRRMF 120

Query: 422 KNWCKSKKKA 451
            N   SK+ A
Sbjct: 121 GNRYASKESA 130

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>RL3_METTH (O26110) 50S ribosomal protein L3P|
          Length = 337

 Score = 91.3 bits (225), Expect = 2e-18
 Identities = 54/147 (36%), Positives = 77/147 (52%)
 Frame = +2

Query: 77  KFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVEKPG 256
           +   PR GS+ F PRKR +R   +VKS+P+ D+     L A  GYKAGMTH++    +  
Sbjct: 3   RHHQPRKGSVAFSPRKRAARETPRVKSWPQVDEPG---LLALAGYKAGMTHVMMVDNQKN 59

Query: 257 SKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCK 436
           S     E    VTI+E PPL ++ +  Y KT RGL+TL  V A    +D+RR+       
Sbjct: 60  SPTEGMEVSTPVTILEVPPLTVMAVRTYEKTSRGLKTLGEVLATETKDDLRRK------- 112

Query: 437 SKKKAFTKYALKYDSDAGKKEIQLQLE 517
                 T  A  YD +A  ++I+  +E
Sbjct: 113 -----LTPPADDYDQEAAIEKIRSNME 134

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>RL3_AERPE (Q9YFM2) 50S ribosomal protein L3P|
          Length = 344

 Score = 90.5 bits (223), Expect = 3e-18
 Identities = 55/119 (46%), Positives = 70/119 (58%), Gaps = 2/119 (1%)
 Frame = +2

Query: 65  MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 244
           M  RK   PR GSLGF PRKR SR   +VK +P+ D  KP  L AFLGY+AGMTH+    
Sbjct: 1   MGARKKRAPRRGSLGFSPRKRASRLVPRVKRWPEVDIGKPVPL-AFLGYRAGMTHVFMVD 59

Query: 245 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTP-RGLRTLNSVWAQHLSE-DVRRR 415
           ++PG     KE    VTI+ETPP+ +  +  Y   P RG  +L   WAQ   E +++RR
Sbjct: 60  DRPGRPTSGKEIFVPVTIVETPPMFVAAVRLYGYDPNRGRYSLGEAWAQPPPELELQRR 118

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>RL3_HALMA (P20279) 50S ribosomal protein L3P (Hmal3) (Hl1)|
          Length = 337

 Score = 87.4 bits (215), Expect = 2e-17
 Identities = 48/108 (44%), Positives = 59/108 (54%)
 Frame = +2

Query: 89  PRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVEKPGSKLH 268
           PR GSLGF PRKR +    +  S+P DD Q    +  F GYKAGMTH+V   ++P S   
Sbjct: 6   PRKGSLGFGPRKRSTSETPRFNSWPSDDGQPG--VQGFAGYKAGMTHVVLVNDEPNSPRE 63

Query: 269 KKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRR 412
             E    VT+IETPP+  V L AY  TP G R L  VW      ++ R
Sbjct: 64  GMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDR 111

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>RL3_PYRKO (Q5JDJ0) 50S ribosomal protein L3P|
          Length = 346

 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 47/113 (41%), Positives = 63/113 (55%)
 Frame = +2

Query: 77  KFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVEKPG 256
           K   PR GSL + PRKR      +++S+PKD + +   +  F GYKAGMTHI+   + PG
Sbjct: 3   KIHRPRRGSLAYSPRKRAKSIVPRIRSWPKDSEVR---MLGFAGYKAGMTHILMIDDSPG 59

Query: 257 SKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRR 415
                KE    VTI+E PPL + G+ AY +   GL T   VW   L ++V RR
Sbjct: 60  LT-KGKEIFVPVTIVEVPPLFVYGIRAYKQGYLGLETATEVWFHDLHKNVARR 111

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>RL3_METVA (Q9UWG2) 50S ribosomal protein L3P|
          Length = 334

 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 45/113 (39%), Positives = 64/113 (56%)
 Frame = +2

Query: 77  KFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVEKPG 256
           K   PR GSL F PRKR  +   K++S+P D   K   L AF  YKAG TH +     P 
Sbjct: 4   KKNRPRRGSLAFSPRKRAKKLVPKIRSWPAD---KKVGLQAFPVYKAGTTHALLVENNPK 60

Query: 257 SKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRR 415
           S  + +E    VT++ETP + + G+ AY KT +GL+ L  VWA+   +++ R+
Sbjct: 61  SPNNGQEVFSPVTVLETPEITVAGIRAYGKTTKGLKALTEVWAKQQDKELGRK 113

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>RL3_ARCFU (O28354) 50S ribosomal protein L3P|
          Length = 331

 Score = 83.2 bits (204), Expect = 4e-16
 Identities = 41/113 (36%), Positives = 66/113 (58%)
 Frame = +2

Query: 77  KFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVEKPG 256
           K+  PR GSL F PRKR      +++++P+ D+ +   +  F GYKAGMTH+V   ++  
Sbjct: 2   KYHRPRRGSLAFSPRKRAKSIVPRIRAWPECDRVR---MQGFAGYKAGMTHVVMIDDRKN 58

Query: 257 SKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRR 415
           S  + +E    VT+IETPP+ +  +  Y KT  G++    VW+ +L + + RR
Sbjct: 59  SPTYGEEVVVPVTVIETPPMKVAAVRVYKKTQYGMQIAAEVWSNNLDDFLDRR 111

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>RL3_HALSA (Q9HPD4) 50S ribosomal protein L3P|
          Length = 334

 Score = 82.0 bits (201), Expect = 9e-16
 Identities = 44/108 (40%), Positives = 57/108 (52%)
 Frame = +2

Query: 89  PRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVEKPGSKLH 268
           PR GS+GF PRKR      +  S+P DD +    L  F GYKAGMTH+V   +K  +   
Sbjct: 6   PRKGSMGFSPRKRAESEVPRFNSWPADDGE--VGLQGFAGYKAGMTHVVLVDDKANAPTE 63

Query: 269 KKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRR 412
             ET   VT++ETPP+    +  Y  TP G + L  VWA    E + R
Sbjct: 64  GMETTVPVTVVETPPMRAAAVRLYEDTPYGKKPLTEVWADDTHESLDR 111

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>RL3_SULTO (Q975I1) 50S ribosomal protein L3P|
          Length = 343

 Score = 81.3 bits (199), Expect = 2e-15
 Identities = 46/114 (40%), Positives = 64/114 (56%)
 Frame = +2

Query: 65  MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 244
           M HRK   PR GS G  PRKR S      +S+P     +P  L  F+GYK GM+HI    
Sbjct: 1   MGHRKLASPRRGSAGVRPRKRASEILPTPRSWPTIQSNEP-KLLGFVGYKVGMSHIFMID 59

Query: 245 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDV 406
           +KP S  + KE    V++IETPP++ + + AYV  P+G  T  + +   +SED+
Sbjct: 60  DKPTSPNYGKEIYVPVSVIETPPVIPLAIRAYVMGPKGEPTTLTEYWGDISEDL 113

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>RL3_METKA (Q8TY90) 50S ribosomal protein L3P|
          Length = 361

 Score = 80.5 bits (197), Expect = 3e-15
 Identities = 39/100 (39%), Positives = 58/100 (58%)
 Frame = +2

Query: 89  PRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVEKPGSKLH 268
           PR GSL F PRKR SR   +++S+P +++ +   +  F GYKAGMTH +   + P S   
Sbjct: 12  PRRGSLAFSPRKRASRPVPRIRSWPDEERVR---VQGFAGYKAGMTHAIMIDDWPNSPTE 68

Query: 269 KKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQ 388
            +E    VTI++ PP+ +  + AY  TP G R +   WA+
Sbjct: 69  GEEISVPVTILDAPPMYVAAIRAYAPTPDGYRCVTEAWAE 108

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>RL3_SULAC (Q4JB40) 50S ribosomal protein L3P|
          Length = 342

 Score = 79.7 bits (195), Expect = 5e-15
 Identities = 55/149 (36%), Positives = 76/149 (51%), Gaps = 1/149 (0%)
 Frame = +2

Query: 65  MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 244
           M HRK   PR GS G  PRKR        K++P  + ++P  L  F+GYKAGMTH+    
Sbjct: 1   MGHRKLSSPRRGSAGLRPRKRADEILPTPKNWPLVNLKEP-KLLGFIGYKAGMTHVYMID 59

Query: 245 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRG-LRTLNSVWAQHLSEDVRRRFY 421
           +KP S  + KE    VTI+E+PP++ + L AY    +G L  L   WA          F 
Sbjct: 60  DKPTSPNYGKEVYTPVTIVESPPILGLALRAYHIDSKGELSVLVDYWA---------NFE 110

Query: 422 KNWCKSKKKAFTKYALKYDSDAGKKEIQL 508
           +   K  K+  T  +LK DS   K+++ L
Sbjct: 111 EGSLKYLKRKIT--SLKVDSSKMKEKLDL 137

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>RL3_PYRFU (Q8TZZ8) 50S ribosomal protein L3P|
          Length = 365

 Score = 76.6 bits (187), Expect = 4e-14
 Identities = 45/101 (44%), Positives = 59/101 (58%)
 Frame = +2

Query: 77  KFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVEKPG 256
           K   PR GSLGF PRKR      +++S+PK+ + +   +  F GYKAGMTHI+   ++PG
Sbjct: 3   KVHRPRRGSLGFSPRKRAKSIVPRIRSWPKETEVR---MLGFAGYKAGMTHILMIDDEPG 59

Query: 257 SKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSV 379
              + KE    VTIIETPPL + G+ AY     GL T   V
Sbjct: 60  -LTNGKEIFMPVTIIETPPLRVFGIRAYRMGYLGLETATEV 99

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>RL3_PYRHO (O59418) 50S ribosomal protein L3P|
          Length = 362

 Score = 76.6 bits (187), Expect = 4e-14
 Identities = 51/129 (39%), Positives = 68/129 (52%)
 Frame = +2

Query: 77  KFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVEKPG 256
           K   PR GSL F PRKR      +++S+PK+ + +   +  F GYKAGMTHI+   ++PG
Sbjct: 3   KIHRPRKGSLAFSPRKRAKSIVPRIRSWPKETEVR---MLGFAGYKAGMTHILMIDDEPG 59

Query: 257 SKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCK 436
              + KE    VTIIETPPL + G+ AY +   GL T   V    +  D     Y    K
Sbjct: 60  -LTNGKEIFMPVTIIETPPLRVFGIRAYRQGYLGLETAGEV----IVPDFELDNYTPSKK 114

Query: 437 SKKKAFTKY 463
            K + FT Y
Sbjct: 115 GKGRKFTFY 123

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>RL3_PYRAE (Q8ZW52) 50S ribosomal protein L3P|
          Length = 338

 Score = 75.9 bits (185), Expect = 7e-14
 Identities = 43/114 (37%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
 Frame = +2

Query: 77  KFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVEKPG 256
           K   PR GS+G  PRKR +    +V+++P+ +  KP  L  F  YKAGM H V   ++P 
Sbjct: 4   KINRPRRGSMGVYPRKRAADIVPRVRTWPEVNLGKPA-LLGFAAYKAGMLHAVVVDDRPT 62

Query: 257 SKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRG--LRTLNSVWAQHLSEDVRR 412
           S L+ KE  +AVT+++ PPL + G   Y   P     R +  VWA  L + + R
Sbjct: 63  SPLYGKEVVKAVTVLDAPPLYVWGFRLYTLDPTNGYKRAVAEVWASELPKFLHR 116

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>RL3_PYRAB (Q9V1T5) 50S ribosomal protein L3P|
          Length = 361

 Score = 75.9 bits (185), Expect = 7e-14
 Identities = 52/133 (39%), Positives = 70/133 (52%), Gaps = 2/133 (1%)
 Frame = +2

Query: 77  KFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVEKPG 256
           K   PR GSL F PRKR      +++S+PK+ + +   +  F GYKAGMTHI+   ++PG
Sbjct: 3   KVHRPRRGSLAFSPRKRAKSIVPRIRSWPKETEVR---MLGFAGYKAGMTHILMIDDEPG 59

Query: 257 SKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWC- 433
              + KE    VTIIETPPL + G+ AY +   GL T   V       D       N+  
Sbjct: 60  -LTNGKEIFMPVTIIETPPLRVFGIRAYRQGYLGLETATEVIVPDFELD-------NYVS 111

Query: 434 -KSKKKAFTKYAL 469
            K+K + FT Y L
Sbjct: 112 KKAKGRKFTFYQL 124

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>RL3_SULSO (Q9UXA8) 50S ribosomal protein L3P|
          Length = 351

 Score = 75.5 bits (184), Expect = 9e-14
 Identities = 50/146 (34%), Positives = 74/146 (50%), Gaps = 8/146 (5%)
 Frame = +2

Query: 65  MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 244
           M HRK   PR GS G  PRKR S      +++P+ + Q P  L  F+GYK GMTH+    
Sbjct: 1   MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQINSQNP-KLLGFVGYKVGMTHVFMID 59

Query: 245 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRG-LRTLNSVWAQHLSE--DVRRR 415
           + P S  + KE    VT++E PP++ + L AY    +G    +   W+    +  D+ RR
Sbjct: 60  DWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAIDGKGEPNVITEYWSSSSLQFLDITRR 119

Query: 416 FY--KNWCK---SKKKAFTKYALKYD 478
            +   ++ K   SKKK   ++  K D
Sbjct: 120 IHSISSFLKDDESKKKFDERFNTKLD 145

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>RL3_METJA (P54014) 50S ribosomal protein L3P|
          Length = 335

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 41/110 (37%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
 Frame = +2

Query: 89  PRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVEKPGSKLH 268
           PR GSL F PRKR  R   +++S+P++D  +   L AF  YKAGM+H   + + P S   
Sbjct: 8   PRRGSLAFSPRKRAKRPVPRIRSWPEEDTVR---LQAFPVYKAGMSHAFIKEDNPKSPNA 64

Query: 269 KKETCEAVTIIETPPLVIVGLVAYVKTPRG-LRTLNSVWAQHLSEDVRRR 415
            +E    +TI+E PP+ +  +  Y +  R  L TL  VWA +L +++ R+
Sbjct: 65  GQEVFTPITILEAPPINVCAIRVYGRNERNYLTTLTEVWADNLDKELERK 114

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>RL3_NANEQ (P60458) 50S ribosomal protein L3P|
          Length = 321

 Score = 72.8 bits (177), Expect = 6e-13
 Identities = 43/122 (35%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
 Frame = +2

Query: 89  PRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVEKPGSKLH 268
           PR GS+GF PRKR SR   ++K++PK ++ KP    AF  YK GMTH +  +       +
Sbjct: 9   PRRGSMGFWPRKRASRIYPRIKTWPKIEEIKP---LAFAAYKVGMTHTILNI-------N 58

Query: 269 KKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRF--YKNWCKSK 442
            +     VT++E P L+++G  AY K    L+ ++S++   L + V R+    KN+   +
Sbjct: 59  GERVFTPVTVLEAPELLVIGAKAYKKENGALKEISSLYFNDLPQYVFRKIPKLKNYNFEE 118

Query: 443 KK 448
           KK
Sbjct: 119 KK 120

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>RL3_METAC (Q8TRU7) 50S ribosomal protein L3P|
          Length = 337

 Score = 72.8 bits (177), Expect = 6e-13
 Identities = 37/109 (33%), Positives = 58/109 (53%)
 Frame = +2

Query: 89  PRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVEKPGSKLH 268
           P+ GSL F PRKR   H  + +++P+   +    L +F GYK GMTH++   +   S   
Sbjct: 7   PKRGSLAFSPRKRAKSHIPRFRAWPEATGEPK--LQSFAGYKVGMTHVIMVDDTKNSLTQ 64

Query: 269 KKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRR 415
             E    VT+IETP + +  + AY +   G + +  VWA  L  +++RR
Sbjct: 65  GMEISVPVTVIETPAIRVAAIRAYAEDSTGEKAIAEVWAADLDPELKRR 113

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>RL3_METMA (Q8PV50) 50S ribosomal protein L3P|
          Length = 337

 Score = 70.5 bits (171), Expect = 3e-12
 Identities = 36/109 (33%), Positives = 57/109 (52%)
 Frame = +2

Query: 89  PRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVEKPGSKLH 268
           P+ GSL F PRKR   H  + +++P+   +    L +F GYK GMTH++   +   S   
Sbjct: 7   PKRGSLAFSPRKRAKSHIPRFRAWPEATGEPK--LQSFAGYKVGMTHVIMVDDIKNSLTQ 64

Query: 269 KKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRR 415
             E    VT+IETP + +  + AY +   G + +   WA  L  +++RR
Sbjct: 65  GMEISVPVTVIETPAIRVAAVRAYTEDSTGEKAIAEAWAADLDSELKRR 113

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>RL3_THEVO (Q97BX7) 50S ribosomal protein L3P|
          Length = 331

 Score = 56.2 bits (134), Expect = 5e-08
 Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
 Frame = +2

Query: 86  HPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVEKPGSKL 265
           H R GS+ + PR R      +++S+P  +   P  +  F G+K GMTH+     +  S  
Sbjct: 6   HSRRGSMAYYPRVRAKSIEPRIRSWP--EISGPVKVQGFAGFKVGMTHVEMVDYRKTSVT 63

Query: 266 HKKETCEAVTIIETPPLVIVGLVAYVKTPRG-LRTLNSVWAQHLSEDVRRR 415
             +     VT+IE PPL ++G+  Y +   G +  +   W Q+L +++ ++
Sbjct: 64  AGQPIFVPVTVIEVPPLDVIGIRLYDEDEEGNMVVVYEKWTQNLDKELFKK 114

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>RL3_THEAC (Q9HIQ9) 50S ribosomal protein L3P|
          Length = 331

 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
 Frame = +2

Query: 86  HPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREVEKPGSKL 265
           H R GS+ + PR R      K++S+P  + +    +  F G+K GMTH+     +  S  
Sbjct: 6   HSRRGSMAYYPRVRAKSVDPKIRSWP--EIKGEVKVQGFAGFKVGMTHVEMIDYRKKSVT 63

Query: 266 HKKETCEAVTIIETPPLVIVGLVAYVKTPRG-LRTLNSVWAQHLSEDVRRR 415
             +     VT++E PPL +VG   Y +   G L  +   WA+ L +++ R+
Sbjct: 64  AGQPILVPVTVVEVPPLDVVGYRLYDEDAEGNLVVVFEAWAKDLDKEIFRK 114

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>RO22_XENLA (P51990) Heterogeneous nuclear ribonucleoprotein A2 homolog 2|
           (hnRNP A2(B))
          Length = 358

 Score = 35.0 bits (79), Expect = 0.13
 Identities = 18/48 (37%), Positives = 25/48 (52%)
 Frame = -3

Query: 239 HEQCGSFQPCSPGRQ*GGTASVGHPWGRTSPFHGDASSASWGGSRGNR 96
           ++Q  S+ P   G   GG  S+G P+G  +   G+ S AS GG  G R
Sbjct: 308 NQQSSSYGPMKSGGNFGGNRSMGGPYGGGNYGPGNGSGASGGGGYGGR 355

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>APC_XENLA (P70039) Adenomatous polyposis coli homolog (Protein APC)|
          Length = 2829

 Score = 32.7 bits (73), Expect = 0.64
 Identities = 20/45 (44%), Positives = 26/45 (57%)
 Frame = +3

Query: 69   RTASLSTRGTVPSASSPGSAARVTVER*SPSPRMTNRSRATSLPS 203
            RTA  S+  +  S+ S   AARVT    +PSPR +N   +TS PS
Sbjct: 2745 RTAFSSSSSSKHSSPSGTVAARVTPFNYNPSPRKSNGENSTSRPS 2789

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>K1C10_HUMAN (P13645) Keratin, type I cytoskeletal 10 (Cytokeratin-10) (CK-10)|
           (Keratin-10) (K10)
          Length = 593

 Score = 32.3 bits (72), Expect = 0.83
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = -3

Query: 209 SPGRQ*GGTASVGHPWGRTSPFHGDASSASWGGSRGNRASGAQTCGAT 66
           S G   GG++S GH  G +S  HG +SS  +GG       G    G++
Sbjct: 509 SGGGYGGGSSSGGHGGGSSSGGHGGSSSGGYGGGSSGGGGGGYGGGSS 556

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>INO80_GIBZE (Q4IL82) Putative DNA helicase INO80 (EC 3.6.1.-)|
          Length = 1904

 Score = 32.3 bits (72), Expect = 0.83
 Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 9/71 (12%)
 Frame = +3

Query: 36  LPQVRKEQR---RCRTASLSTRGT---VPSASSPGSAARVTVER*SPSPRMTNRSRATSL 197
           LP   KE+    + R A  ST+G    +  A++P +  R++V++ SP+PR+  + +A   
Sbjct: 434 LPSREKEKEPAPKKRGARKSTKGRASDIRDAATPKNGRRLSVKKESPTPRLPAKRQANGQ 493

Query: 198 P---SWATRLE 221
           P   +W+  +E
Sbjct: 494 PKPKTWSAEME 504

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>NYX_MOUSE (P83503) Nyctalopin precursor|
          Length = 476

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = -1

Query: 118 GEEAEGTVPRVLKLAVRHRRCSFLTCG 38
           GE A GT+P + +L++RH   SF+T G
Sbjct: 73  GERAFGTLPSLRRLSLRHNNLSFITPG 99

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>NYX_HUMAN (Q9GZU5) Nyctalopin precursor|
          Length = 481

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = -1

Query: 118 GEEAEGTVPRVLKLAVRHRRCSFLTCG 38
           GE A GT+P + +L++RH   SF+T G
Sbjct: 78  GERAFGTLPSLRRLSLRHNNLSFITPG 104

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>FIBA1_PETMA (P02674) Fibrinogen alpha-1 chain precursor [Contains:|
           Fibrinopeptide A] (Fragment)
          Length = 966

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 27/74 (36%), Positives = 28/74 (37%), Gaps = 9/74 (12%)
 Frame = -3

Query: 266 GAWIQASRPHEQCGSFQPCS---PGRQ*GGTASV-GHPWG---RTSPFHGDASSASW--G 114
           G+W    R     GS Q  S    GR    T S  G  WG   RT P  G A   SW  G
Sbjct: 704 GSWSTGGRTEPNTGSGQGGSWGTGGRTEPNTGSAQGGSWGTGGRTEPNTGSAQGGSWGTG 763

Query: 113 GSRGNRASGAQTCG 72
           GS       AQ  G
Sbjct: 764 GSTATNTGSAQGGG 777



 Score = 30.4 bits (67), Expect = 3.2
 Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
 Frame = -3

Query: 266 GAWIQASRPHEQCGSFQPCSPGRQ*GGTASVGHPWGRTSPFHGDASSASWG-GSRGNRAS 90
           G+W    R     GS Q        GG+ S G   GRT P  G A   SWG G R    +
Sbjct: 506 GSWGTGGRTEPNTGSAQ--------GGSWSTG---GRTEPNTGSAKGGSWGTGGRTEPNT 554

Query: 89  GAQTCGA 69
           G+   G+
Sbjct: 555 GSAKGGS 561



 Score = 29.3 bits (64), Expect = 7.1
 Identities = 26/74 (35%), Positives = 30/74 (40%), Gaps = 8/74 (10%)
 Frame = -3

Query: 266 GAWIQASRPHEQCGSFQPCS---PGRQ*GGTASV-GHPWG---RTSPFHGDASSASWG-G 111
           G+W    R     GS Q  S    GR    T S  G  WG   RT P  G A   SWG G
Sbjct: 596 GSWGTGGRTEPNTGSAQGGSWGTGGRTEPNTGSAQGGSWGTGGRTEPNTGSAQGGSWGTG 655

Query: 110 SRGNRASGAQTCGA 69
            R    +G+   G+
Sbjct: 656 GRTEPNTGSAQGGS 669



 Score = 28.9 bits (63), Expect = 9.2
 Identities = 22/67 (32%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
 Frame = -3

Query: 266 GAWIQASRPHEQCGSFQPCSPGRQ*GGTASVGHPWGRTSPFHGDASSASWG-GSRGNRAS 90
           G+W    R     GS Q        GG+   G   GRT P  G A   SWG G R    +
Sbjct: 470 GSWGTGGRTEPNTGSAQ--------GGSWGTG---GRTEPNTGSAQGGSWGTGGRTEPNT 518

Query: 89  GAQTCGA 69
           G+   G+
Sbjct: 519 GSAQGGS 525

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>COTG_BACSU (P39801) Spore coat protein G|
          Length = 195

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 30/144 (20%), Positives = 54/144 (37%)
 Frame = +2

Query: 44  GKEGAAAMSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGM 223
           GK+ +   SHR  +  R     +   K+   H+   KSF    + +  H  ++  +K   
Sbjct: 31  GKKRSHKKSHRTHKKSRSHKKSYCSHKKSRSHK---KSFCSHKKSRS-HKKSYCSHKKSR 86

Query: 224 THIVREVEKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSED 403
           +H      K   + HKK      +             +Y K+ R  +   S    + S  
Sbjct: 87  SH------KKSYRSHKKSRSYKKSYRSYKKSR-----SYKKSCRSYKKSRSYKKSYCSHK 135

Query: 404 VRRRFYKNWCKSKKKAFTKYALKY 475
            + R YK  C++ KK++  +   Y
Sbjct: 136 KKSRSYKKSCRTHKKSYRSHKKYY 159

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>CRUM2_MOUSE (Q80YA8) Crumbs homolog 2 (Crumbs-like protein 2) (Fragment)|
          Length = 1248

 Score = 29.6 bits (65), Expect = 5.4
 Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
 Frame = +1

Query: 157 LPQG*PTEAVPPHCLPGLQGWNDPHCS*GREAWIQAP-QEGNL*GCYHH*DPSSCHC 324
           +PQG    +   +C+PG QG   PHC    +     P Q G    C +  D   CHC
Sbjct: 53  VPQGPDPNSFRCYCVPGFQG---PHCELDIDECASRPCQHGGT--CQNLADHYECHC 104

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>PHF2_MOUSE (Q9WTU0) PHD finger protein 2 (GRC5)|
          Length = 1096

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 25/90 (27%), Positives = 38/90 (42%)
 Frame = +2

Query: 251 PGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNW 430
           P   L +  T EA+T +E P           KTP+ + ++ +    H   D+ R   +  
Sbjct: 540 PNLDLLEAHTKEALTKMEPPKKG--------KTPKSVLSVPNKDTVHTQNDMERLEIREQ 591

Query: 431 CKSKKKAFTKYALKYDSDAGKKEIQLQLEK 520
            KSK +A  KY         K E + +LEK
Sbjct: 592 TKSKSEAKWKYKNSKPDSLLKMEEEQRLEK 621

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>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)|
            (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon)
            (Somatostatin receptor-interacting protein)
            (SSTR-interacting protein) (SSTRIP)
          Length = 2167

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 22/64 (34%), Positives = 31/64 (48%)
 Frame = +3

Query: 90   RGTVPSASSPGSAARVTVER*SPSPRMTNRSRATSLPSWATRLE*PTLFVRSRSLDPSST 269
            +G++PSASSP S A   + R  P P     S   S+P     ++ P+     RS   SST
Sbjct: 1130 KGSIPSASSPTSPA---LPRSEPPP--AGPSEKNSIPIPTIIIKAPSTSSSGRSSQGSST 1184

Query: 270  RRKP 281
              +P
Sbjct: 1185 EAEP 1188

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>YHJD_DICD3 (P45417) Hypothetical 36.0 kDa protein in kdgK 5'region (K1 ORF)|
          Length = 328

 Score = 28.9 bits (63), Expect = 9.2
 Identities = 17/57 (29%), Positives = 27/57 (47%)
 Frame = -2

Query: 330 RPTMTRGGVSMMVTASQVSFLWSLDPGFSTSRTMWVIPAL*PRKAVRWHGFCWSSLG 160
           RP MT   +S+ + A+ + FLW L          WV+P   PR+     G   +++G
Sbjct: 216 RPVMTLIALSISIFANYLLFLWIL----------WVLPRHNPRRGPLLRGTLMAAIG 262

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>IL6RA_HUMAN (P08887) Interleukin-6 receptor alpha chain precursor (IL-6R-alpha)|
           (IL-6R 1) (Membrane glycoprotein 80) (gp80) (CD126
           antigen)
          Length = 468

 Score = 28.9 bits (63), Expect = 9.2
 Identities = 23/105 (21%), Positives = 40/105 (38%)
 Frame = +2

Query: 158 FPKDDQQKPCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETCEAVTIIETPPLVIVGLVA 337
           + ++ Q+  C L    G  +     +      GSK  K +T +   I++  P   + + A
Sbjct: 167 YSQESQKFSCQLAVPEGDSSFYIVSMCVASSVGSKFSKTQTFQGCGILQPDPPANITVTA 226

Query: 338 YVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKKAFTKYALK 472
             + PR L           S   R RF   +   + K FT + +K
Sbjct: 227 VARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWMVK 271


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,370,181
Number of Sequences: 219361
Number of extensions: 1434443
Number of successful extensions: 5460
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 5190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5416
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4085413911
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result