ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart57a02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC137759.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0008H02, complete sequence Length = 143438 Score = 147 bits (74), Expect = 5e-32 Identities = 191/230 (83%) Strand = Plus / Plus Query: 343 gtgctcgtccactaccacccgctcgccggccgcctcggcatcagccgggagatgaagctc 402 ||||||||||||||||||||||| || || || || |||||| ||||||||||||| Sbjct: 2891 gtgctcgtccactaccacccgctggcggggcggctgacgatcagcgcggagatgaagctc 2950 Query: 403 actgtggagtgcaccggtgagggtgtcccgttcgtggaggccgaagccgcctgcgacctg 462 | |||||| |||||| ||||| | | |||||| | ||||| |||| | |||||| Sbjct: 2951 gccgtggagctcaccggcgagggcgccgtgttcgtcgccgccgacgccgggtacgacctc 3010 Query: 463 gccctcatcggcgacctctccaccccggaccccgccgcgctgggccagctcgtgtactcc 522 ||| | ||||||||||| ||| || |||||||||||||| ||||| ||||| |||||| Sbjct: 3011 gccgacgtcggcgacctcaccaagcccgaccccgccgcgctcggccacctcgtctactcc 3070 Query: 523 gtccccggcgccaagaacatcctcgagatgccgcccatgacggcgcaggt 572 ||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 3071 atccccggcgccaagaacatcctcgagatgccccccatgacggcgcaggt 3120 Score = 147 bits (74), Expect = 5e-32 Identities = 110/122 (90%) Strand = Plus / Plus Query: 161 tgaagcgcgaggagccgacgctggtatcgccggcggaggcgacgccgacggggaagcagt 220 ||||||||| |||||| |||||| |||||||||||||||||||||||||| || ||| Sbjct: 2703 tgaagcgcggcgagccggagctggtggcgccggcggaggcgacgccgacgggggagaagt 2762 Query: 221 actacctgtccaatctggaccagaacatcgcggtgatcgtgcagaccgtgtactgcttca 280 ||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||| || Sbjct: 2763 actacctgtccaacctggaccagaacatcgccgtgatcgtgcagacggtgtactgctaca 2822 Query: 281 ag 282 || Sbjct: 2823 ag 2824
>gb|AC136377.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0028G07, complete sequence Length = 157463 Score = 147 bits (74), Expect = 5e-32 Identities = 191/230 (83%) Strand = Plus / Plus Query: 343 gtgctcgtccactaccacccgctcgccggccgcctcggcatcagccgggagatgaagctc 402 ||||||||||||||||||||||| || || || || |||||| ||||||||||||| Sbjct: 89208 gtgctcgtccactaccacccgctggcggggcggctgacgatcagcgcggagatgaagctc 89267 Query: 403 actgtggagtgcaccggtgagggtgtcccgttcgtggaggccgaagccgcctgcgacctg 462 | |||||| |||||| ||||| | | |||||| | ||||| |||| | |||||| Sbjct: 89268 gccgtggagctcaccggcgagggcgccgtgttcgtcgccgccgacgccgggtacgacctc 89327 Query: 463 gccctcatcggcgacctctccaccccggaccccgccgcgctgggccagctcgtgtactcc 522 ||| | ||||||||||| ||| || |||||||||||||| ||||| ||||| |||||| Sbjct: 89328 gccgacgtcggcgacctcaccaagcccgaccccgccgcgctcggccacctcgtctactcc 89387 Query: 523 gtccccggcgccaagaacatcctcgagatgccgcccatgacggcgcaggt 572 ||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 89388 atccccggcgccaagaacatcctcgagatgccccccatgacggcgcaggt 89437 Score = 147 bits (74), Expect = 5e-32 Identities = 110/122 (90%) Strand = Plus / Plus Query: 161 tgaagcgcgaggagccgacgctggtatcgccggcggaggcgacgccgacggggaagcagt 220 ||||||||| |||||| |||||| |||||||||||||||||||||||||| || ||| Sbjct: 89020 tgaagcgcggcgagccggagctggtggcgccggcggaggcgacgccgacgggggagaagt 89079 Query: 221 actacctgtccaatctggaccagaacatcgcggtgatcgtgcagaccgtgtactgcttca 280 ||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||| || Sbjct: 89080 actacctgtccaacctggaccagaacatcgccgtgatcgtgcagacggtgtactgctaca 89139 Query: 281 ag 282 || Sbjct: 89140 ag 89141
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 147 bits (74), Expect = 5e-32 Identities = 191/230 (83%) Strand = Plus / Plus Query: 343 gtgctcgtccactaccacccgctcgccggccgcctcggcatcagccgggagatgaagctc 402 ||||||||||||||||||||||| || || || || |||||| ||||||||||||| Sbjct: 17495194 gtgctcgtccactaccacccgctggcggggcggctgacgatcagcgcggagatgaagctc 17495253 Query: 403 actgtggagtgcaccggtgagggtgtcccgttcgtggaggccgaagccgcctgcgacctg 462 | |||||| |||||| ||||| | | |||||| | ||||| |||| | |||||| Sbjct: 17495254 gccgtggagctcaccggcgagggcgccgtgttcgtcgccgccgacgccgggtacgacctc 17495313 Query: 463 gccctcatcggcgacctctccaccccggaccccgccgcgctgggccagctcgtgtactcc 522 ||| | ||||||||||| ||| || |||||||||||||| ||||| ||||| |||||| Sbjct: 17495314 gccgacgtcggcgacctcaccaagcccgaccccgccgcgctcggccacctcgtctactcc 17495373 Query: 523 gtccccggcgccaagaacatcctcgagatgccgcccatgacggcgcaggt 572 ||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 17495374 atccccggcgccaagaacatcctcgagatgccccccatgacggcgcaggt 17495423 Score = 147 bits (74), Expect = 5e-32 Identities = 110/122 (90%) Strand = Plus / Plus Query: 161 tgaagcgcgaggagccgacgctggtatcgccggcggaggcgacgccgacggggaagcagt 220 ||||||||| |||||| |||||| |||||||||||||||||||||||||| || ||| Sbjct: 17495006 tgaagcgcggcgagccggagctggtggcgccggcggaggcgacgccgacgggggagaagt 17495065 Query: 221 actacctgtccaatctggaccagaacatcgcggtgatcgtgcagaccgtgtactgcttca 280 ||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||| || Sbjct: 17495066 actacctgtccaacctggaccagaacatcgccgtgatcgtgcagacggtgtactgctaca 17495125 Query: 281 ag 282 || Sbjct: 17495126 ag 17495127 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 509 agctcgtgtactccgtccccggcgccaagaacatcctcgagatgcc 554 ||||||||||| | ||||||||||||||||| ||||||||||||| Sbjct: 23144912 agctcgtgtacagcatccccggcgccaagaacgtcctcgagatgcc 23144867
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 147 bits (74), Expect = 5e-32 Identities = 191/230 (83%) Strand = Plus / Plus Query: 343 gtgctcgtccactaccacccgctcgccggccgcctcggcatcagccgggagatgaagctc 402 ||||||||||||||||||||||| || || || || |||||| ||||||||||||| Sbjct: 17588904 gtgctcgtccactaccacccgctggcggggcggctgacgatcagcgcggagatgaagctc 17588963 Query: 403 actgtggagtgcaccggtgagggtgtcccgttcgtggaggccgaagccgcctgcgacctg 462 | |||||| |||||| ||||| | | |||||| | ||||| |||| | |||||| Sbjct: 17588964 gccgtggagctcaccggcgagggcgccgtgttcgtcgccgccgacgccgggtacgacctc 17589023 Query: 463 gccctcatcggcgacctctccaccccggaccccgccgcgctgggccagctcgtgtactcc 522 ||| | ||||||||||| ||| || |||||||||||||| ||||| ||||| |||||| Sbjct: 17589024 gccgacgtcggcgacctcaccaagcccgaccccgccgcgctcggccacctcgtctactcc 17589083 Query: 523 gtccccggcgccaagaacatcctcgagatgccgcccatgacggcgcaggt 572 ||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 17589084 atccccggcgccaagaacatcctcgagatgccccccatgacggcgcaggt 17589133 Score = 147 bits (74), Expect = 5e-32 Identities = 110/122 (90%) Strand = Plus / Plus Query: 161 tgaagcgcgaggagccgacgctggtatcgccggcggaggcgacgccgacggggaagcagt 220 ||||||||| |||||| |||||| |||||||||||||||||||||||||| || ||| Sbjct: 17588716 tgaagcgcggcgagccggagctggtggcgccggcggaggcgacgccgacgggggagaagt 17588775 Query: 221 actacctgtccaatctggaccagaacatcgcggtgatcgtgcagaccgtgtactgcttca 280 ||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||| || Sbjct: 17588776 actacctgtccaacctggaccagaacatcgccgtgatcgtgcagacggtgtactgctaca 17588835 Query: 281 ag 282 || Sbjct: 17588836 ag 17588837 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 509 agctcgtgtactccgtccccggcgccaagaacatcctcgagatgcc 554 ||||||||||| | ||||||||||||||||| ||||||||||||| Sbjct: 23454822 agctcgtgtacagcatccccggcgccaagaacgtcctcgagatgcc 23454777
>ref|XM_463664.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1329 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 220 tactacctgtccaatctggaccagaacatcgcggtgatcgtgcagaccgtgtactgcttc 279 |||||||| ||||| || |||||||||||||| || |||||||||||||| ||||||||| Sbjct: 115 tactacctctccaacctcgaccagaacatcgccgtcatcgtgcagaccgtctactgcttc 174 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Plus Query: 490 gaccccgccgcgctgggccagctcgtgtactccgtccccggcgccaagaac 540 |||||||||| || ||| ||||||| ||| ||||||||||||||||||| Sbjct: 388 gaccccgccgtcctcggcgagctcgtctacagcgtccccggcgccaagaac 438 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 349 gtccactaccacccgctcgccggccgcct 377 ||||||||| |||| |||||||||||||| Sbjct: 247 gtccactactaccctctcgccggccgcct 275
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 220 tactacctgtccaatctggaccagaacatcgcggtgatcgtgcagaccgtgtactgcttc 279 |||||||| ||||| || |||||||||||||| || |||||||||||||| ||||||||| Sbjct: 40501532 tactacctctccaacctcgaccagaacatcgccgtcatcgtgcagaccgtctactgcttc 40501591 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 490 gaccccgccgcgctgggccagctcgtgtactccgtccccggcgccaagaacatcctcgag 549 |||||||||| || ||| ||||||| ||| ||||||||||||||||||| |||||||| Sbjct: 40501805 gaccccgccgtcctcggcgagctcgtctacagcgtccccggcgccaagaacgtcctcgag 40501864 Query: 550 atgcc 554 ||||| Sbjct: 40501865 atgcc 40501869 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 349 gtccactaccacccgctcgccggccgcct 377 ||||||||| |||| |||||||||||||| Sbjct: 40501664 gtccactactaccctctcgccggccgcct 40501692 Score = 40.1 bits (20), Expect = 8.3 Identities = 35/40 (87%) Strand = Plus / Minus Query: 406 gtggagtgcaccggtgagggtgtcccgttcgtggaggccg 445 |||||||||||||| ||||| | | |||||||||||||| Sbjct: 10563010 gtggagtgcaccggcgagggcgcctggttcgtggaggccg 10562971
>dbj|AP004223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1033B05 Length = 138882 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 220 tactacctgtccaatctggaccagaacatcgcggtgatcgtgcagaccgtgtactgcttc 279 |||||||| ||||| || |||||||||||||| || |||||||||||||| ||||||||| Sbjct: 63156 tactacctctccaacctcgaccagaacatcgccgtcatcgtgcagaccgtctactgcttc 63215 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 490 gaccccgccgcgctgggccagctcgtgtactccgtccccggcgccaagaacatcctcgag 549 |||||||||| || ||| ||||||| ||| ||||||||||||||||||| |||||||| Sbjct: 63429 gaccccgccgtcctcggcgagctcgtctacagcgtccccggcgccaagaacgtcctcgag 63488 Query: 550 atgcc 554 ||||| Sbjct: 63489 atgcc 63493 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 349 gtccactaccacccgctcgccggccgcct 377 ||||||||| |||| |||||||||||||| Sbjct: 63288 gtccactactaccctctcgccggccgcct 63316
>gb|AC104844.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0030L19, complete sequence Length = 128848 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 509 agctcgtgtactccgtccccggcgccaagaacatcctcgagatgcc 554 ||||||||||| | ||||||||||||||||| ||||||||||||| Sbjct: 14097 agctcgtgtacagcatccccggcgccaagaacgtcctcgagatgcc 14052
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 509 agctcgtgtactccgtccccggcgccaagaacatcctcgaga 550 ||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 10874338 agctcgtgtacaacgtccccggcgccaagaacgtcctcgaga 10874297
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 509 agctcgtgtactccgtccccggcgccaagaacatcctcgaga 550 ||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 10874037 agctcgtgtacaacgtccccggcgccaagaacgtcctcgaga 10873996
>emb|AL954152.5|CNS08CCQ Oryza sativa chromosome 12, . BAC OSJNBb0034E16 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 124204 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 509 agctcgtgtactccgtccccggcgccaagaacatcctcgaga 550 ||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 23401 agctcgtgtacaacgtccccggcgccaagaacgtcctcgaga 23360
>ref|NM_185277.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1401 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 345 gctcgtccactaccacccgctcgccggccgc 375 ||||||||||||| ||||||||||||||||| Sbjct: 210 gctcgtccactactacccgctcgccggccgc 240
>gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0431G05, complete sequence Length = 145044 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 345 gctcgtccactaccacccgctcgccggccgc 375 ||||||||||||| ||||||||||||||||| Sbjct: 86744 gctcgtccactactacccgctcgccggccgc 86774
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 345 gctcgtccactaccacccgctcgccggccgc 375 ||||||||||||| ||||||||||||||||| Sbjct: 3209027 gctcgtccactactacccgctcgccggccgc 3209057 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 406 gtggagtgcaccggtgagggtgtcccgttcgtggaggccga 446 |||||||||||||| ||||| ||| |||||| |||||||| Sbjct: 14439757 gtggagtgcaccggcgagggcgtcgtgttcgtcgaggccga 14439797
>gb|AC087425.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0676G05, complete sequence Length = 167317 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 345 gctcgtccactaccacccgctcgccggccgc 375 ||||||||||||| ||||||||||||||||| Sbjct: 2851 gctcgtccactactacccgctcgccggccgc 2881
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 509 agctcgtgtactccgtccccggcgccaagaac 540 ||||||||||| ||||||||||||||||||| Sbjct: 11874220 agctcgtgtacagcgtccccggcgccaagaac 11874251 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 172 gagccgacgctggtatcgccggcg 195 |||||||||||||| ||||||||| Sbjct: 34531039 gagccgacgctggtgtcgccggcg 34531062 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 acccgctcgccggccgcctc 378 |||||||||||||||||||| Sbjct: 16802273 acccgctcgccggccgcctc 16802292 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 acccgctcgccggccgcctc 378 |||||||||||||||||||| Sbjct: 16793044 acccgctcgccggccgcctc 16793025 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 acccgctcgccggccgcctc 378 |||||||||||||||||||| Sbjct: 16779493 acccgctcgccggccgcctc 16779474
>dbj|AP005009.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0572A04 Length = 132018 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 509 agctcgtgtactccgtccccggcgccaagaac 540 ||||||||||| ||||||||||||||||||| Sbjct: 71993 agctcgtgtacagcgtccccggcgccaagaac 72024
>ref|NM_194664.1| Oryza sativa (japonica cultivar-group) putative O-deacetylbaccatin III-10-0-acetyltransferase (OSJNBa0049K09.22), mRNA Length = 1269 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 349 gtccactaccacccgctcgccggccgcctcg 379 ||||||||| |||| |||||||||||||||| Sbjct: 202 gtccactactaccctctcgccggccgcctcg 232
>ref|NM_194662.1| Oryza sativa (japonica cultivar-group) putative O-deacetylbaccatin III-10-0-acetyltransferase (OSJNBa0049K09.20), mRNA Length = 1266 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 349 gtccactaccacccgctcgccggccgcctcg 379 ||||||||| |||| |||||||||||||||| Sbjct: 202 gtccactactaccctctcgccggccgcctcg 232
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 349 gtccactaccacccgctcgccggccgcctcg 379 ||||||||| |||| |||||||||||||||| Sbjct: 1423252 gtccactactaccctctcgccggccgcctcg 1423282 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 349 gtccactaccacccgctcgccggccgcctcg 379 ||||||||| |||| |||||||||||||||| Sbjct: 1410352 gtccactactaccctctcgccggccgcctcg 1410382
>gb|AC131967.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0049K09, complete sequence Length = 154181 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 349 gtccactaccacccgctcgccggccgcctcg 379 ||||||||| |||| |||||||||||||||| Sbjct: 36006 gtccactactaccctctcgccggccgcctcg 36036 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 349 gtccactaccacccgctcgccggccgcctcg 379 ||||||||| |||| |||||||||||||||| Sbjct: 23106 gtccactactaccctctcgccggccgcctcg 23136
>gb|AC074282.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0049K09, complete sequence Length = 146576 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 349 gtccactaccacccgctcgccggccgcctcg 379 ||||||||| |||| |||||||||||||||| Sbjct: 122582 gtccactactaccctctcgccggccgcctcg 122612 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 349 gtccactaccacccgctcgccggccgcctcg 379 ||||||||| |||| |||||||||||||||| Sbjct: 109682 gtccactactaccctctcgccggccgcctcg 109712
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 349 gtccactaccacccgctcgccggccgcctcg 379 ||||||||| |||| |||||||||||||||| Sbjct: 1423252 gtccactactaccctctcgccggccgcctcg 1423282 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 349 gtccactaccacccgctcgccggccgcctcg 379 ||||||||| |||| |||||||||||||||| Sbjct: 1410352 gtccactactaccctctcgccggccgcctcg 1410382 Score = 42.1 bits (21), Expect = 2.1 Identities = 51/61 (83%) Strand = Plus / Plus Query: 220 tactacctgtccaatctggaccagaacatcgcggtgatcgtgcagaccgtgtactgcttc 279 |||||||| ||||| || |||||||||||||| | | ||||||||||| |||| |||| Sbjct: 12989005 tactacctctccaacctcgaccagaacatcgccatcgttgtgcagaccgtctactacttc 12989064 Query: 280 a 280 | Sbjct: 12989065 a 12989065
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 349 gtccactaccacccgctcgccggccgcctcg 379 ||||||||| |||| |||||||||||||||| Sbjct: 1423249 gtccactactaccctctcgccggccgcctcg 1423279 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 349 gtccactaccacccgctcgccggccgcctcg 379 ||||||||| |||| |||||||||||||||| Sbjct: 1410349 gtccactactaccctctcgccggccgcctcg 1410379 Score = 42.1 bits (21), Expect = 2.1 Identities = 51/61 (83%) Strand = Plus / Plus Query: 220 tactacctgtccaatctggaccagaacatcgcggtgatcgtgcagaccgtgtactgcttc 279 |||||||| ||||| || |||||||||||||| | | ||||||||||| |||| |||| Sbjct: 12996345 tactacctctccaacctcgaccagaacatcgccatcgttgtgcagaccgtctactacttc 12996404 Query: 280 a 280 | Sbjct: 12996405 a 12996405
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 443 ccgaagccgcctgcgacctggc 464 |||||||||||||||||||||| Sbjct: 5652803 ccgaagccgcctgcgacctggc 5652782 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 496 gccgcgctgggccagctcgtg 516 ||||||||||||||||||||| Sbjct: 2173173 gccgcgctgggccagctcgtg 2173153
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 433 ttcgtggaggccgaagccgcctgcga 458 |||| ||||||||||||||||||||| Sbjct: 4199673 ttcgaggaggccgaagccgcctgcga 4199698
>gb|AC067843.16| Homo sapiens chromosome 8, clone RP11-645E10, complete sequence Length = 187559 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 57 tctctgtgtcatccatacactcagag 82 |||||||||||| ||||||||||||| Sbjct: 993 tctctgtgtcatacatacactcagag 968
>gb|AC023955.11| Homo sapiens chromosome 8, clone RP11-153B5, complete sequence Length = 160905 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 57 tctctgtgtcatccatacactcagag 82 |||||||||||| ||||||||||||| Sbjct: 1494 tctctgtgtcatacatacactcagag 1469
>gb|AC020688.7| Homo sapiens chromosome 8, clone RP11-255B23, complete sequence Length = 198958 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 57 tctctgtgtcatccatacactcagag 82 |||||||||||| ||||||||||||| Sbjct: 24370 tctctgtgtcatacatacactcagag 24395
>ref|NM_103319.2| Arabidopsis thaliana adenylosuccinate lyase/ catalytic AT1G36280 mRNA, complete cds Length = 1785 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 41 tttaaacccatcaatatctctgtgtcatc 69 |||||||||||||| |||||||| ||||| Sbjct: 161 tttaaacccatcaaaatctctgtctcatc 189
>gb|AC104712.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1333_C12, complete sequence Length = 102029 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 406 gtggagtgcaccggtgagggtgtcccgttcgtggaggccga 446 |||||||||||||| ||||| ||| |||||| |||||||| Sbjct: 70465 gtggagtgcaccggcgagggcgtcgtgttcgtcgaggccga 70505
>gb|AC021891.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0050N08, complete sequence Length = 144593 Score = 42.1 bits (21), Expect = 2.1 Identities = 51/61 (83%) Strand = Plus / Plus Query: 220 tactacctgtccaatctggaccagaacatcgcggtgatcgtgcagaccgtgtactgcttc 279 |||||||| ||||| || |||||||||||||| | | ||||||||||| |||| |||| Sbjct: 87921 tactacctctccaacctcgaccagaacatcgccatcgttgtgcagaccgtctactacttc 87980 Query: 280 a 280 | Sbjct: 87981 a 87981
>gb|AE004201.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 109 of 251 of the complete chromosome Length = 11498 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 cgctttaaacccatcaatatc 58 ||||||||||||||||||||| Sbjct: 10546 cgctttaaacccatcaatatc 10526
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 496 gccgcgctgggccagctcgtg 516 ||||||||||||||||||||| Sbjct: 2304339 gccgcgctgggccagctcgtg 2304319
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 347 tcgtccactaccacccgctcgccggccgc 375 |||||||||||||||| ||||||||||| Sbjct: 29799922 tcgtccactaccaccctatcgccggccgc 29799894
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 343 gtgctcgtccactaccacccgctcgccggccgcctcg 379 |||||||||| || | |||| |||||||||||||||| Sbjct: 4280183 gtgctcgtccccttctaccccctcgccggccgcctcg 4280219 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 477 cctctccaccccggaccccgccgc 500 |||||||||||| ||||||||||| Sbjct: 30632207 cctctccacccccgaccccgccgc 30632230
>dbj|AB103463.1| Streptomyces sp. AM-7161 medermycin biosynthetic gene cluster (med-ORF1 - 30) and ORF P - Z , partial and complete cds Length = 36202 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 455 gcgacctggccctcatcggcg 475 ||||||||||||||||||||| Sbjct: 16553 gcgacctggccctcatcggcg 16573
>dbj|AB210504.1| Ciona intestinalis mRNA for insulin receptor, partial cds, clone: cidg849h04 Length = 2306 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 137 gaagcaaggtgcagctgatgtccttgaag 165 |||||||| |||||||||||||| ||||| Sbjct: 1487 gaagcaagttgcagctgatgtccatgaag 1515
>gb|AC025781.8|AC025781 Arabidopsis thaliana chromosome 1 BAC F15C21 genomic sequence, complete sequence Length = 112862 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 41 tttaaacccatcaatatctctgtgtcatc 69 |||||||||||||| |||||||| ||||| Sbjct: 104605 tttaaacccatcaaaatctctgtctcatc 104633
>gb|BT002331.1| Arabidopsis thaliana clone C105138 putative adenylosuccinate lyase (At1g36280) mRNA, complete cds Length = 1615 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 41 tttaaacccatcaatatctctgtgtcatc 69 |||||||||||||| |||||||| ||||| Sbjct: 69 tttaaacccatcaaaatctctgtctcatc 97
>dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0554A06 Length = 165311 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 343 gtgctcgtccactaccacccgctcgccggccgcctcg 379 |||||||||| || | |||| |||||||||||||||| Sbjct: 125404 gtgctcgtccccttctaccccctcgccggccgcctcg 125440
>dbj|AK109842.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-E02, full insert sequence Length = 1500 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 343 gtgctcgtccactaccacccgctcgccggccgcctcg 379 |||||||||| || | |||| |||||||||||||||| Sbjct: 251 gtgctcgtccccttctaccccctcgccggccgcctcg 287
>emb|AJ937741.1| Streptomyces ambofaciens ATCC 23877 right terminal inverted repeat Length = 243019 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 187 tcgccggcggaggcgacgccgacgg 211 ||||||||||||| ||||||||||| Sbjct: 110266 tcgccggcggaggtgacgccgacgg 110290
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 361 ccgctcgccggccgcctcggc 381 ||||||||||||||||||||| Sbjct: 1569580 ccgctcgccggccgcctcggc 1569600
>emb|AJ937740.1| Streptomyces ambofaciens ATCC 23877 left terminal inverted repeat Length = 273746 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 187 tcgccggcggaggcgacgccgacgg 211 ||||||||||||| ||||||||||| Sbjct: 110266 tcgccggcggaggtgacgccgacgg 110290
>gb|AY080867.1| Arabidopsis thaliana At1g36280 mRNA sequence Length = 1802 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 41 tttaaacccatcaatatctctgtgtcatc 69 |||||||||||||| |||||||| ||||| Sbjct: 161 tttaaacccatcaaaatctctgtctcatc 189
>dbj|AK115997.1| Ciona intestinalis cDNA, clone:citb003j18, full insert sequence Length = 1749 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 137 gaagcaaggtgcagctgatgtccttgaag 165 |||||||| |||||||||||||| ||||| Sbjct: 950 gaagcaagttgcagctgatgtccatgaag 978
>emb|AL662981.3|OSJN00182 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086O06, complete sequence Length = 178552 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 347 tcgtccactaccacccgctcgccggccgc 375 |||||||||||||||| ||||||||||| Sbjct: 80848 tcgtccactaccaccctatcgccggccgc 80820
>ref|NM_183607.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 453 Score = 40.1 bits (20), Expect = 8.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 406 gtggagtgcaccggtgagggtgtcccgttcgtggaggccg 445 |||||||||||||| ||||| | | |||||||||||||| Sbjct: 286 gtggagtgcaccggcgagggcgcctggttcgtggaggccg 325
>ref|XM_468307.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2271 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 172 gagccgacgctggtatcgccggcg 195 |||||||||||||| ||||||||| Sbjct: 97 gagccgacgctggtgtcgccggcg 74
>ref|XM_465691.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1791 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 acccgctcgccggccgcctc 378 |||||||||||||||||||| Sbjct: 333 acccgctcgccggccgcctc 352
>ref|XM_465687.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1518 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 acccgctcgccggccgcctc 378 |||||||||||||||||||| Sbjct: 263 acccgctcgccggccgcctc 282
>ref|XM_465684.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1745 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 acccgctcgccggccgcctc 378 |||||||||||||||||||| Sbjct: 322 acccgctcgccggccgcctc 341
>ref|XM_365130.1| Magnaporthe grisea 70-15 hypothetical protein (MG09975.4) partial mRNA Length = 855 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 544 ctcgagatgccgcccatgacggcg 567 |||||||||||||||||| ||||| Sbjct: 667 ctcgagatgccgcccatgccggcg 690
>gb|AY897184.1| Uncultured bacterium clone cosT-M40-KS52 modular polyketide synthase gene, partial cds Length = 671 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 tcgccggccgcctcggcatc 384 |||||||||||||||||||| Sbjct: 503 tcgccggccgcctcggcatc 484
>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16 Length = 349497 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 549 gatgccgcccatgacggcgc 568 |||||||||||||||||||| Sbjct: 308219 gatgccgcccatgacggcgc 308238
>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14 Length = 348866 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 549 gatgccgcccatgacggcgc 568 |||||||||||||||||||| Sbjct: 72010 gatgccgcccatgacggcgc 72029
>emb|AL590463.1|SCO590463 Streptomyces coelicolor plasmid SCP1; segment 1/2 Length = 178000 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 365 tcgccggccgcctcggcatcagcc 388 ||||||| |||||||||||||||| Sbjct: 88307 tcgccggtcgcctcggcatcagcc 88284
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 487 ccggaccccgccgcgctgggccag 510 |||||||||| ||||||||||||| Sbjct: 1622830 ccggaccccgacgcgctgggccag 1622807
>gb|AC025173.5|AC025173 Homo sapiens chromosome 5 clone CTD-2036C20, complete sequence Length = 140935 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 acttcctctgtattctttct 37 |||||||||||||||||||| Sbjct: 83265 acttcctctgtattctttct 83246
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 gtcccgttcgtggaggccga 446 |||||||||||||||||||| Sbjct: 1594419 gtcccgttcgtggaggccga 1594438
>dbj|AP002482.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0706B05 Length = 187835 Score = 40.1 bits (20), Expect = 8.3 Identities = 35/40 (87%) Strand = Plus / Minus Query: 406 gtggagtgcaccggtgagggtgtcccgttcgtggaggccg 445 |||||||||||||| ||||| | | |||||||||||||| Sbjct: 57633 gtggagtgcaccggcgagggcgcctggttcgtggaggccg 57594
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 356 accacccgctcgccggccgcctcg 379 ||||||||| |||||||||||||| Sbjct: 619796 accacccgcacgccggccgcctcg 619773
>dbj|AP006616.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1206D04 Length = 130176 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 477 cctctccaccccggaccccgccgc 500 |||||||||||| ||||||||||| Sbjct: 34863 cctctccacccccgaccccgccgc 34886
>dbj|AP005750.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0069C14 Length = 150579 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 477 cctctccaccccggaccccgccgc 500 |||||||||||| ||||||||||| Sbjct: 130770 cctctccacccccgaccccgccgc 130793
>dbj|AP004998.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0036H07 Length = 149797 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 acccgctcgccggccgcctc 378 |||||||||||||||||||| Sbjct: 3330 acccgctcgccggccgcctc 3349
>dbj|AP005820.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0091C16 Length = 162527 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 acccgctcgccggccgcctc 378 |||||||||||||||||||| Sbjct: 156548 acccgctcgccggccgcctc 156529
>dbj|AP004302.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1122_H01 Length = 103030 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 acccgctcgccggccgcctc 378 |||||||||||||||||||| Sbjct: 50515 acccgctcgccggccgcctc 50534 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 acccgctcgccggccgcctc 378 |||||||||||||||||||| Sbjct: 41286 acccgctcgccggccgcctc 41267 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 acccgctcgccggccgcctc 378 |||||||||||||||||||| Sbjct: 27735 acccgctcgccggccgcctc 27716
>dbj|AP004064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1520_C09 Length = 145553 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 172 gagccgacgctggtatcgccggcg 195 |||||||||||||| ||||||||| Sbjct: 41979 gagccgacgctggtgtcgccggcg 42002
>dbj|AK103832.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148A21, full insert sequence Length = 1790 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 acccgctcgccggccgcctc 378 |||||||||||||||||||| Sbjct: 332 acccgctcgccggccgcctc 351
>dbj|AK103708.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136O19, full insert sequence Length = 1745 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 acccgctcgccggccgcctc 378 |||||||||||||||||||| Sbjct: 322 acccgctcgccggccgcctc 341
>dbj|AK071566.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023104M24, full insert sequence Length = 998 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 477 cctctccaccccggaccccgccgc 500 |||||||||||| ||||||||||| Sbjct: 153 cctctccacccccgaccccgccgc 176
>dbj|AK070443.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054D03, full insert sequence Length = 1655 Score = 40.1 bits (20), Expect = 8.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 406 gtggagtgcaccggtgagggtgtcccgttcgtggaggccg 445 |||||||||||||| ||||| | | |||||||||||||| Sbjct: 393 gtggagtgcaccggcgagggcgcctggttcgtggaggccg 432
>dbj|AK060689.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-A09, full insert sequence Length = 1553 Score = 40.1 bits (20), Expect = 8.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 406 gtggagtgcaccggtgagggtgtcccgttcgtggaggccg 445 |||||||||||||| ||||| | | |||||||||||||| Sbjct: 288 gtggagtgcaccggcgagggcgcctggttcgtggaggccg 327
>gb|AF108814.1|AF108814 Petromyzon marinus homeobox protein SIX4 (Six4) mRNA, partial cds Length = 191 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 agaccgtgtactgcttcaag 282 |||||||||||||||||||| Sbjct: 38 agaccgtgtactgcttcaag 57
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 cggcggaggcgacgccgacg 210 |||||||||||||||||||| Sbjct: 2577277 cggcggaggcgacgccgacg 2577258
>gb|AC164569.3| Gallus gallus BAC clone CH261-138K23 from chromosome unknown, complete sequence Length = 248284 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 aaggtgcagctgatgtcctt 161 |||||||||||||||||||| Sbjct: 108320 aaggtgcagctgatgtcctt 108301
>gb|AY846870.1| Gordonia terrae phage GTE5 genomic sequence Length = 31661 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 ggaggcgaagcagaacggcg 121 |||||||||||||||||||| Sbjct: 19971 ggaggcgaagcagaacggcg 19990
>emb|AL607032.16| Mouse DNA sequence from clone RP23-15L19 on chromosome 4, complete sequence Length = 136416 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 caccatggcgggaagcaagg 145 |||||||||||||||||||| Sbjct: 117330 caccatggcgggaagcaagg 117311 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,012,676 Number of Sequences: 3902068 Number of extensions: 4012676 Number of successful extensions: 78299 Number of sequences better than 10.0: 79 Number of HSP's better than 10.0 without gapping: 89 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 76163 Number of HSP's gapped (non-prelim): 2133 length of query: 609 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 586 effective length of database: 17,143,297,704 effective search space: 10045972454544 effective search space used: 10045972454544 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
