ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart56h08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY106744.1| Zea mays PCO111647 mRNA sequence Length = 1267 Score = 412 bits (208), Expect = e-112 Identities = 380/437 (86%), Gaps = 9/437 (2%) Strand = Plus / Plus Query: 160 gttcaacacggacggcaatgtccggacgggatacgacgtttctgggcagcaagtggtgac 219 ||||| ||||||||||| ||||| ||||||||||||| ||| || ||||| ||||||| Sbjct: 182 gttcaccacggacggcaccgtccgcacgggatacgacgattcgggccagcaggtggtgat 241 Query: 220 gctcagcctcgaccagcactcaggcgc---cggcttcaactccgatgagcaatacctcta 276 |||| |||||||||||||||| ||||| ||||||||||||| | ||||| ||||| || Sbjct: 242 gctccgcctcgaccagcactccggcgctgccggcttcaactccaaggagcagtaccttta 301 Query: 277 cggtgagtttagcatccagatgaagctcatcccgggaaactcggccggcaccgtatcctg 336 ||| ||||| ||| || ||||||||||||||| ||| ||||| ||||||||||| || || Sbjct: 302 cggcgagttcagcgtcgagatgaagctcatccgggggaactccgccggcaccgtctcgtg 361 Query: 337 cttctacctttcttccggtgatggagacgggcacgacgagatcgacatggagttcatggg 396 ||||||||| |||||||| || || ||||||| ||||||||||||||||||||||||||| Sbjct: 362 cttctacctctcttccggcgacggcgacgggcgcgacgagatcgacatggagttcatggg 421 Query: 397 caactccagtggccctggccatccggtagtgctcaacaccaacgtctgggtcaacggcga 456 |||||| || || || ||||| ||||| ||||||||||| |||| || |||||| Sbjct: 422 caactcgag------cgggcagccggtggtgctgaacaccaacgtgtgggccagcggcga 475 Query: 457 tggcaagaaggagcaccagttcgacctctggttcgaccccgccgccgactaccacaccta 516 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 476 cggcaagaaggagcaccagttcgacctctggttcgacccctccgccgactaccacaccta 535 Query: 517 caccatcatctggaacccggagaacatcctcttcaaggtggacaacctcttcatccggtc 576 ||||||||||||||||||| |||||||| |||||||| ||| ||||||||||||| || Sbjct: 536 caccatcatctggaacccgaccaacatcctgttcaaggtcgacgacctcttcatccgctc 595 Query: 577 cttcaagcgcttcgccg 593 ||||||||||| ||||| Sbjct: 596 cttcaagcgctacgccg 612
>gb|AY107002.1| Zea mays PCO111646 mRNA sequence Length = 776 Score = 329 bits (166), Expect = 6e-87 Identities = 380/449 (84%), Gaps = 8/449 (1%) Strand = Plus / Plus Query: 146 tggctcgatgacaagttcaacacggacggcaatgtccggacgggatacgacgtttctggg 205 |||||| | ||||| |||||||||||||||| ||||| || ||||||| || ||| Sbjct: 200 tggctctacgacaaattcaacacggacggcaccgtccgcacccagtacgacgcgtcgggg 259 Query: 206 cagcaagtggtgacgctcagcctcgaccagca-ctcaggcgccggcttcaactccgatga 264 ||| | |||| || ||||||||| |||| ||| ||| |||||||||||||||||| | || Sbjct: 260 caggaggtggcgatgctcagcctggacc-gcagctctggcgccggcttcaactccaagga 318 Query: 265 gcaatacctctacggtgagtttagcatccagatgaagctcatcccgggaaactcggccgg 324 ||| ||||| ||||| ||||| ||| ||||||||||||||||||| || ||||| ||||| Sbjct: 319 gcagtacctgtacggcgagttcagcgtccagatgaagctcatccccggcaactccgccgg 378 Query: 325 caccgtatcctgcttctacctttcttccggtgatggagacgggcacgacgagatcgacat 384 |||||| || ||||||||||| || || || || || ||||||||||||||||||||||| Sbjct: 379 caccgtctcgtgcttctacctctcgtcgggcgacggcgacgggcacgacgagatcgacat 438 Query: 385 ggagttcatgggcaactccagtggccctggccatccggtagtgctcaacaccaacgtctg 444 |||||||||||||||| | || || | | ||||| ||||| ||||| ||||| || Sbjct: 439 ggagttcatgggcaacgcgagcgggc------agccggtggtgctgaacacgaacgtgtg 492 Query: 445 ggtcaacggcgatggcaagaaggagcaccagttcgacctctggttcgaccccgccgccga 504 || || |||||| ||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 493 ggccagcggcgacggcaagaaggagcaccagttcgacctctggttcgacccctccgccga 552 Query: 505 ctaccacacctacaccatcatctggaacccggagaacatcctcttcaaggtggacaacct 564 |||||||||||||||||||||||||||||||| |||||||| |||||||||||| | Sbjct: 553 ctaccacacctacaccatcatctggaacccggccaacatcctgttcaaggtggacggcga 612 Query: 565 cttcatccggtccttcaagcgcttcgccg 593 | | ||||||| ||||||||||| ||||| Sbjct: 613 cgtgatccggtgcttcaagcgctacgccg 641
>emb|AJ875021.1| Zea mays mRNA for xyloglucan endo-transglycosylase/hydrolase (xth1 gene), cultivated variety W64A Length = 1225 Score = 321 bits (162), Expect = 1e-84 Identities = 379/449 (84%), Gaps = 8/449 (1%) Strand = Plus / Plus Query: 146 tggctcgatgacaagttcaacacggacggcaatgtccggacgggatacgacgtttctggg 205 |||||| | ||||| |||||||||||||||| ||||| || ||||||| || ||| Sbjct: 175 tggctctacgacaaattcaacacggacggcaccgtccgcacccagtacgacgcgtcgggg 234 Query: 206 cagcaagtggtgacgctcagcctcgaccagca-ctcaggcgccggcttcaactccgatga 264 ||| | |||| || ||||||||| |||| ||| ||| |||||||||||||||||| | || Sbjct: 235 caggaggtggcgatgctcagcctggacc-gcagctctggcgccggcttcaactccaagga 293 Query: 265 gcaatacctctacggtgagtttagcatccagatgaagctcatcccgggaaactcggccgg 324 ||| ||||| ||||| ||||| ||| ||||||||||||||||||| || ||||| ||||| Sbjct: 294 gcagtacctgtacggcgagttcagcgtccagatgaagctcatccccggcaactccgccgg 353 Query: 325 caccgtatcctgcttctacctttcttccggtgatggagacgggcacgacgagatcgacat 384 |||||| || ||||||||||| || || || || || ||||||||||||||||||||||| Sbjct: 354 caccgtctcgtgcttctacctctcgtcgggcgacggcgacgggcacgacgagatcgacat 413 Query: 385 ggagttcatgggcaactccagtggccctggccatccggtagtgctcaacaccaacgtctg 444 |||||||||||||||| | || || | | ||||| ||||| ||||| ||||| || Sbjct: 414 ggagttcatgggcaacgcgagcgggc------agccggtggtgctgaacacgaacgtgtg 467 Query: 445 ggtcaacggcgatggcaagaaggagcaccagttcgacctctggttcgaccccgccgccga 504 || || |||||| ||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 468 ggccagcggcgacggcaagaaggagcaccagttcgacctctggttcgacccctccgccga 527 Query: 505 ctaccacacctacaccatcatctggaacccggagaacatcctcttcaaggtggacaacct 564 ||||||||||||||||||||||||||||||| |||||||| |||||||||||| | Sbjct: 528 ctaccacacctacaccatcatctggaacccgaccaacatcctgttcaaggtggacggcga 587 Query: 565 cttcatccggtccttcaagcgcttcgccg 593 | | ||||||| ||||||||||| ||||| Sbjct: 588 cgtgatccggtgcttcaagcgctacgccg 616
>gb|AY106262.1| Zea mays PCO111648 mRNA sequence Length = 1257 Score = 242 bits (122), Expect = 1e-60 Identities = 268/317 (84%), Gaps = 6/317 (1%) Strand = Plus / Plus Query: 269 tacctctacggtgagtttagcatccagatgaagctcatcccgggaaactcggccggcacc 328 ||||| ||||| ||||| ||||||||||||| ||| |||||||| ||||| || |||||| Sbjct: 337 tacctgtacggggagttcagcatccagatgaggctgatcccgggcaactccgcgggcacc 396 Query: 329 gtatcctgcttctacctttcttccggtgatggagacgggcacgacgagatcgacatggag 388 || ||| ||||||||| || || || || || ||||||||||||||||||||||||| Sbjct: 397 gtgacctccttctacctgtcgtcgggcgacgggcccgggcacgacgagatcgacatggag 456 Query: 389 ttcatgggcaactccagtggccctggccatccggtagtgctcaacaccaacgtctgggtc 448 |||||||||||| |||| || | | || || ||||| ||||||||||| |||| | Sbjct: 457 ttcatgggcaacgccagcgggc------agcccgtggtgctgaacaccaacgtgtgggcc 510 Query: 449 aacggcgatggcaagaaggagcaccagttcgacctctggttcgaccccgccgccgactac 508 |||||||| ||||||||||||||||||||| |||| ||||||||||| |||||||||| | Sbjct: 511 aacggcgacggcaagaaggagcaccagttctacctgtggttcgacccggccgccgacttc 570 Query: 509 cacacctacaccatcatctggaacccggagaacatcctcttcaaggtggacaacctcttc 568 |||||||||||||||||||||||| ||||| || |||||||||||||| |||||||| Sbjct: 571 cacacctacaccatcatctggaacgacaagaacgtcatcttcaaggtggacgacctcttc 630 Query: 569 atccggtccttcaagcg 585 | |||| ||||||||| Sbjct: 631 gtgcggtgcttcaagcg 647
>gb|BT017380.1| Zea mays clone EL01N0326D06.c mRNA sequence Length = 781 Score = 168 bits (85), Expect = 1e-38 Identities = 142/161 (88%) Strand = Plus / Plus Query: 425 gtgctcaacaccaacgtctgggtcaacggcgatggcaagaaggagcaccagttcgacctc 484 ||||| ||||||||||| |||| ||||||||| ||| ||||||||||||||||| |||| Sbjct: 9 gtgctgaacaccaacgtgtgggccaacggcgacggctagaaggagcaccagttctacctg 68 Query: 485 tggttcgaccccgccgccgactaccacacctacaccatcatctggaacccggagaacatc 544 ||||||||||| |||||||||| ||||||||||||||||||||||||| ||||| || Sbjct: 69 tggttcgacccggccgccgacttccacacctacaccatcatctggaacgacaagaacgtc 128 Query: 545 ctcttcaaggtggacaacctcttcatccggtccttcaagcg 585 |||||||||||||| |||||||| | |||| ||||||||| Sbjct: 129 atcttcaaggtggacgacctcttcgtgcggtgcttcaagcg 169
>emb|X93173.1|HVXETPM5 H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (PM5) Length = 1188 Score = 145 bits (73), Expect = 2e-31 Identities = 115/129 (89%) Strand = Plus / Plus Query: 431 aacaccaacgtctgggtcaacggcgatggcaagaaggagcaccagttcgacctctggttc 490 |||||||||||||||| || |||||| ||||||||||||||||||||| ||||||||||| Sbjct: 422 aacaccaacgtctgggccagcggcgacggcaagaaggagcaccagttctacctctggttc 481 Query: 491 gaccccgccgccgactaccacacctacaccatcatctggaacccggagaacatcctcttc 550 |||||| ||||||||| ||||||||||| ||| |||||||||| |||||||| | ||| Sbjct: 482 gaccccaccgccgacttccacacctacaagatcgtctggaaccccaagaacatcatattc 541 Query: 551 aaggtggac 559 |||||||| Sbjct: 542 caggtggac 550 Score = 95.6 bits (48), Expect = 2e-16 Identities = 111/132 (84%) Strand = Plus / Plus Query: 269 tacctctacggtgagtttagcatccagatgaagctcatcccgggaaactcggccggcacc 328 ||||||||||| ||||| ||| ||||||||||||||||| || ||||| ||||||||| Sbjct: 266 tacctctacggcgagttcagcgtccagatgaagctcatcggcggcaactccgccggcacc 325 Query: 329 gtatcctgcttctacctttcttccggtgatggagacgggcacgacgagatcgacatggag 388 || ||| ||||||||| | || || || || ||||| || |||||||||||||| ||| Sbjct: 326 gtcacctccttctacctgacgtctggggagggcgacggccatgacgagatcgacatcgag 385 Query: 389 ttcatgggcaac 400 |||||||||||| Sbjct: 386 ttcatgggcaac 397
>gb|AY589588.1| Triticum aestivum endotransglucosylase/hydrolase XTH4 mRNA, complete cds Length = 1100 Score = 137 bits (69), Expect = 5e-29 Identities = 111/125 (88%) Strand = Plus / Plus Query: 431 aacaccaacgtctgggtcaacggcgatggcaagaaggagcaccagttcgacctctggttc 490 ||||||||||| |||| || |||||| ||||||||||||||||||||| ||||||||||| Sbjct: 407 aacaccaacgtgtgggccagcggcgacggcaagaaggagcaccagttctacctctggttc 466 Query: 491 gaccccgccgccgactaccacacctacaccatcatctggaacccggagaacatcctcttc 550 |||||| ||||||||| ||||||||||| |||| ||||||||| |||||||| ||||| Sbjct: 467 gacccctccgccgacttccacacctacaagatcacctggaaccccaagaacatcatcttc 526 Query: 551 aaggt 555 |||| Sbjct: 527 gaggt 531 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 368 cacgacgagatcgacatggagttcatgggcaactccag 405 ||||||||||||||||| |||||||||||||||||||| Sbjct: 350 cacgacgagatcgacatcgagttcatgggcaactccag 387
>gb|AY589586.1| Triticum aestivum endotransglucosylase/hydrolase XTH2 mRNA, complete cds Length = 1107 Score = 137 bits (69), Expect = 5e-29 Identities = 114/129 (88%) Strand = Plus / Plus Query: 431 aacaccaacgtctgggtcaacggcgatggcaagaaggagcaccagttcgacctctggttc 490 ||||||||||| |||| || |||||| ||||||||||||||||||||| ||||||||||| Sbjct: 411 aacaccaacgtgtgggccagcggcgacggcaagaaggagcaccagttctacctctggttc 470 Query: 491 gaccccgccgccgactaccacacctacaccatcatctggaacccggagaacatcctcttc 550 |||||| ||||||||| ||||||||||| ||| |||||||||| |||||||| | ||| Sbjct: 471 gaccccaccgccgacttccacacctacaagatcgtctggaaccccaagaacatcatattc 530 Query: 551 aaggtggac 559 |||||||| Sbjct: 531 caggtggac 539 Score = 119 bits (60), Expect = 1e-23 Identities = 114/132 (86%) Strand = Plus / Plus Query: 269 tacctctacggtgagtttagcatccagatgaagctcatcccgggaaactcggccggcacc 328 ||||||||||| ||||| ||| ||||||||||||||||| || ||||| ||||||||| Sbjct: 255 tacctctacggcgagttcagcgtccagatgaagctcatcggcggcaactccgccggcacc 314 Query: 329 gtatcctgcttctacctttcttccggtgatggagacgggcacgacgagatcgacatggag 388 || ||| ||||||||| | ||||| || || ||||||||||||||||||||||| ||| Sbjct: 315 gtcacctccttctacctgacgtccggggagggcgacgggcacgacgagatcgacatcgag 374 Query: 389 ttcatgggcaac 400 |||||||||||| Sbjct: 375 ttcatgggcaac 386
>gb|AY589585.1| Triticum aestivum endotransglucosylase/hydrolase XTH1 mRNA, complete cds Length = 958 Score = 137 bits (69), Expect = 5e-29 Identities = 114/129 (88%) Strand = Plus / Plus Query: 431 aacaccaacgtctgggtcaacggcgatggcaagaaggagcaccagttcgacctctggttc 490 ||||||||||| |||| || |||||| ||||||||||||||||||||| ||||||||||| Sbjct: 411 aacaccaacgtgtgggccagcggcgacggcaagaaggagcaccagttctacctctggttc 470 Query: 491 gaccccgccgccgactaccacacctacaccatcatctggaacccggagaacatcctcttc 550 |||||| ||||||||| ||||||||||| ||| |||||||||| |||||||| | ||| Sbjct: 471 gaccccaccgccgacttccacacctacaagatcgtctggaaccccaagaacatcatattc 530 Query: 551 aaggtggac 559 |||||||| Sbjct: 531 caggtggac 539 Score = 119 bits (60), Expect = 1e-23 Identities = 114/132 (86%) Strand = Plus / Plus Query: 269 tacctctacggtgagtttagcatccagatgaagctcatcccgggaaactcggccggcacc 328 ||||||||||| ||||| ||| ||||||||||||||||| || ||||| ||||||||| Sbjct: 255 tacctctacggcgagttcagcgtccagatgaagctcatcggcggcaactccgccggcacc 314 Query: 329 gtatcctgcttctacctttcttccggtgatggagacgggcacgacgagatcgacatggag 388 || ||| ||||||||| | ||||| || || ||||||||||||||||||||||| ||| Sbjct: 315 gtcacctccttctacctgacgtccggggagggcgacgggcacgacgagatcgacatcgag 374 Query: 389 ttcatgggcaac 400 |||||||||||| Sbjct: 375 ttcatgggcaac 386
>ref|XM_507172.1| PREDICTED Oryza sativa (japonica cultivar-group), P0682A06.17 mRNA Length = 1127 Score = 129 bits (65), Expect = 1e-26 Identities = 92/101 (91%) Strand = Plus / Plus Query: 431 aacaccaacgtctgggtcaacggcgatggcaagaaggagcaccagttcgacctctggttc 490 |||||||||||||||| || ||||| ||||||||||||||||||||| ||||||||||| Sbjct: 410 aacaccaacgtctgggctaatggcgacggcaagaaggagcaccagttctacctctggttc 469 Query: 491 gaccccgccgccgactaccacacctacaccatcatctggaa 531 |||||| ||||||||| ||||||||||| ||||||||||| Sbjct: 470 gaccccaccgccgacttccacacctacaagatcatctggaa 510 Score = 95.6 bits (48), Expect = 2e-16 Identities = 102/120 (85%) Strand = Plus / Plus Query: 281 gagtttagcatccagatgaagctcatcccgggaaactcggccggcaccgtatcctgcttc 340 ||||| ||| |||||||||||||| || || ||||| ||||||||||| ||| |||| Sbjct: 266 gagttcagcgtccagatgaagctcgtcggcggcaactccgccggcaccgtcacctccttc 325 Query: 341 tacctttcttccggtgatggagacgggcacgacgagatcgacatggagttcatgggcaac 400 ||||| || ||||| || || ||||| ||||||||||||||||| ||||||||||||||| Sbjct: 326 tacctctcctccggcgagggcgacggccacgacgagatcgacatcgagttcatgggcaac 385
>ref|XM_480868.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1111 Score = 129 bits (65), Expect = 1e-26 Identities = 92/101 (91%) Strand = Plus / Plus Query: 431 aacaccaacgtctgggtcaacggcgatggcaagaaggagcaccagttcgacctctggttc 490 |||||||||||||||| || ||||| ||||||||||||||||||||| ||||||||||| Sbjct: 415 aacaccaacgtctgggctaatggcgacggcaagaaggagcaccagttctacctctggttc 474 Query: 491 gaccccgccgccgactaccacacctacaccatcatctggaa 531 |||||| ||||||||| ||||||||||| ||||||||||| Sbjct: 475 gaccccaccgccgacttccacacctacaagatcatctggaa 515 Score = 95.6 bits (48), Expect = 2e-16 Identities = 102/120 (85%) Strand = Plus / Plus Query: 281 gagtttagcatccagatgaagctcatcccgggaaactcggccggcaccgtatcctgcttc 340 ||||| ||| |||||||||||||| || || ||||| ||||||||||| ||| |||| Sbjct: 271 gagttcagcgtccagatgaagctcgtcggcggcaactccgccggcaccgtcacctccttc 330 Query: 341 tacctttcttccggtgatggagacgggcacgacgagatcgacatggagttcatgggcaac 400 ||||| || ||||| || || ||||| ||||||||||||||||| ||||||||||||||| Sbjct: 331 tacctctcctccggcgagggcgacggccacgacgagatcgacatcgagttcatgggcaac 390
>emb|X91660.1|HVPM2GENE H.vulgare mRNA for xyloglucan endotransglycosylase-like protein Length = 1110 Score = 129 bits (65), Expect = 1e-26 Identities = 113/129 (87%) Strand = Plus / Plus Query: 431 aacaccaacgtctgggtcaacggcgatggcaagaaggagcaccagttcgacctctggttc 490 ||||||||||| |||| || |||||| ||||||||||||||||||||| ||||||||||| Sbjct: 398 aacaccaacgtgtgggccagcggcgacggcaagaaggagcaccagttctacctctggttc 457 Query: 491 gaccccgccgccgactaccacacctacaccatcatctggaacccggagaacatcctcttc 550 |||||| ||||||||| ||||||||||| |||| |||||||| |||||||| | ||| Sbjct: 458 gacccctccgccgacttccacacctacaagatcacatggaacccaaagaacatcatattc 517 Query: 551 aaggtggac 559 |||||||| Sbjct: 518 gaggtggac 526 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 368 cacgacgagatcgacatggagttcatgggcaactc 402 ||||||||||||||||| ||||||||||||||||| Sbjct: 341 cacgacgagatcgacatcgagttcatgggcaactc 375
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 129 bits (65), Expect = 1e-26 Identities = 92/101 (91%) Strand = Plus / Plus Query: 431 aacaccaacgtctgggtcaacggcgatggcaagaaggagcaccagttcgacctctggttc 490 |||||||||||||||| || ||||| ||||||||||||||||||||| ||||||||||| Sbjct: 8322083 aacaccaacgtctgggctaatggcgacggcaagaaggagcaccagttctacctctggttc 8322142 Query: 491 gaccccgccgccgactaccacacctacaccatcatctggaa 531 |||||| ||||||||| ||||||||||| ||||||||||| Sbjct: 8322143 gaccccaccgccgacttccacacctacaagatcatctggaa 8322183 Score = 95.6 bits (48), Expect = 2e-16 Identities = 102/120 (85%) Strand = Plus / Plus Query: 281 gagtttagcatccagatgaagctcatcccgggaaactcggccggcaccgtatcctgcttc 340 ||||| ||| |||||||||||||| || || ||||| ||||||||||| ||| |||| Sbjct: 8321939 gagttcagcgtccagatgaagctcgtcggcggcaactccgccggcaccgtcacctccttc 8321998 Query: 341 tacctttcttccggtgatggagacgggcacgacgagatcgacatggagttcatgggcaac 400 ||||| || ||||| || || ||||| ||||||||||||||||| ||||||||||||||| Sbjct: 8321999 tacctctcctccggcgagggcgacggccacgacgagatcgacatcgagttcatgggcaac 8322058 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Minus Query: 467 gagcaccagttcgacctctggttcgaccccgccgccgactaccacacctacaccatcatc 526 ||||| |||||| |||||||||||||||| ||||||||| |||||||||| ||||| || Sbjct: 8378907 gagcagcagttccgcctctggttcgaccccaccgccgacttccacacctactccatcgtc 8378848 Query: 527 tggaaccc 534 |||||||| Sbjct: 8378847 tggaaccc 8378840 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 503 gactaccacacctacaccatcatctggaacccg 535 |||| ||| |||||||||||||||||||||||| Sbjct: 8488367 gacttccatacctacaccatcatctggaacccg 8488399 Score = 48.1 bits (24), Expect = 0.033 Identities = 45/52 (86%) Strand = Plus / Plus Query: 482 ctctggttcgaccccgccgccgactaccacacctacaccatcatctggaacc 533 |||||||| || ||| | || |||| ||| |||||||||||||||||||||| Sbjct: 8482539 ctctggtttgatcccactgcagacttccatacctacaccatcatctggaacc 8482590
>dbj|AB110604.1| Oryza sativa (japonica cultivar-group) OsXRT5 mRNA for xyloglucan endotransglycosylase-related protein 5, complete cds Length = 1280 Score = 129 bits (65), Expect = 1e-26 Identities = 92/101 (91%) Strand = Plus / Plus Query: 431 aacaccaacgtctgggtcaacggcgatggcaagaaggagcaccagttcgacctctggttc 490 |||||||||||||||| || ||||| ||||||||||||||||||||| ||||||||||| Sbjct: 406 aacaccaacgtctgggctaatggcgacggcaagaaggagcaccagttctacctctggttc 465 Query: 491 gaccccgccgccgactaccacacctacaccatcatctggaa 531 |||||| ||||||||| ||||||||||| ||||||||||| Sbjct: 466 gaccccaccgccgacttccacacctacaagatcatctggaa 506 Score = 95.6 bits (48), Expect = 2e-16 Identities = 102/120 (85%) Strand = Plus / Plus Query: 281 gagtttagcatccagatgaagctcatcccgggaaactcggccggcaccgtatcctgcttc 340 ||||| ||| |||||||||||||| || || ||||| ||||||||||| ||| |||| Sbjct: 262 gagttcagcgtccagatgaagctcgtcggcggcaactccgccggcaccgtcacctccttc 321 Query: 341 tacctttcttccggtgatggagacgggcacgacgagatcgacatggagttcatgggcaac 400 ||||| || ||||| || || ||||| ||||||||||||||||| ||||||||||||||| Sbjct: 322 tacctctcctccggcgagggcgacggccacgacgagatcgacatcgagttcatgggcaac 381
>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0682A06 Length = 142023 Score = 129 bits (65), Expect = 1e-26 Identities = 92/101 (91%) Strand = Plus / Plus Query: 431 aacaccaacgtctgggtcaacggcgatggcaagaaggagcaccagttcgacctctggttc 490 |||||||||||||||| || ||||| ||||||||||||||||||||| ||||||||||| Sbjct: 62192 aacaccaacgtctgggctaatggcgacggcaagaaggagcaccagttctacctctggttc 62251 Query: 491 gaccccgccgccgactaccacacctacaccatcatctggaa 531 |||||| ||||||||| ||||||||||| ||||||||||| Sbjct: 62252 gaccccaccgccgacttccacacctacaagatcatctggaa 62292 Score = 95.6 bits (48), Expect = 2e-16 Identities = 102/120 (85%) Strand = Plus / Plus Query: 281 gagtttagcatccagatgaagctcatcccgggaaactcggccggcaccgtatcctgcttc 340 ||||| ||| |||||||||||||| || || ||||| ||||||||||| ||| |||| Sbjct: 62048 gagttcagcgtccagatgaagctcgtcggcggcaactccgccggcaccgtcacctccttc 62107 Query: 341 tacctttcttccggtgatggagacgggcacgacgagatcgacatggagttcatgggcaac 400 ||||| || ||||| || || ||||| ||||||||||||||||| ||||||||||||||| Sbjct: 62108 tacctctcctccggcgagggcgacggccacgacgagatcgacatcgagttcatgggcaac 62167 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Minus Query: 467 gagcaccagttcgacctctggttcgaccccgccgccgactaccacacctacaccatcatc 526 ||||| |||||| |||||||||||||||| ||||||||| |||||||||| ||||| || Sbjct: 119016 gagcagcagttccgcctctggttcgaccccaccgccgacttccacacctactccatcgtc 118957 Query: 527 tggaaccc 534 |||||||| Sbjct: 118956 tggaaccc 118949
>dbj|AK104451.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-F05, full insert sequence Length = 1111 Score = 129 bits (65), Expect = 1e-26 Identities = 92/101 (91%) Strand = Plus / Plus Query: 431 aacaccaacgtctgggtcaacggcgatggcaagaaggagcaccagttcgacctctggttc 490 |||||||||||||||| || ||||| ||||||||||||||||||||| ||||||||||| Sbjct: 415 aacaccaacgtctgggctaatggcgacggcaagaaggagcaccagttctacctctggttc 474 Query: 491 gaccccgccgccgactaccacacctacaccatcatctggaa 531 |||||| ||||||||| ||||||||||| ||||||||||| Sbjct: 475 gaccccaccgccgacttccacacctacaagatcatctggaa 515 Score = 95.6 bits (48), Expect = 2e-16 Identities = 102/120 (85%) Strand = Plus / Plus Query: 281 gagtttagcatccagatgaagctcatcccgggaaactcggccggcaccgtatcctgcttc 340 ||||| ||| |||||||||||||| || || ||||| ||||||||||| ||| |||| Sbjct: 271 gagttcagcgtccagatgaagctcgtcggcggcaactccgccggcaccgtcacctccttc 330 Query: 341 tacctttcttccggtgatggagacgggcacgacgagatcgacatggagttcatgggcaac 400 ||||| || ||||| || || ||||| ||||||||||||||||| ||||||||||||||| Sbjct: 331 tacctctcctccggcgagggcgacggccacgacgagatcgacatcgagttcatgggcaac 390
>dbj|AK060654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H12, full insert sequence Length = 1127 Score = 129 bits (65), Expect = 1e-26 Identities = 92/101 (91%) Strand = Plus / Plus Query: 431 aacaccaacgtctgggtcaacggcgatggcaagaaggagcaccagttcgacctctggttc 490 |||||||||||||||| || ||||| ||||||||||||||||||||| ||||||||||| Sbjct: 410 aacaccaacgtctgggctaatggcgacggcaagaaggagcaccagttctacctctggttc 469 Query: 491 gaccccgccgccgactaccacacctacaccatcatctggaa 531 |||||| ||||||||| ||||||||||| ||||||||||| Sbjct: 470 gaccccaccgccgacttccacacctacaagatcatctggaa 510 Score = 95.6 bits (48), Expect = 2e-16 Identities = 102/120 (85%) Strand = Plus / Plus Query: 281 gagtttagcatccagatgaagctcatcccgggaaactcggccggcaccgtatcctgcttc 340 ||||| ||| |||||||||||||| || || ||||| ||||||||||| ||| |||| Sbjct: 266 gagttcagcgtccagatgaagctcgtcggcggcaactccgccggcaccgtcacctccttc 325 Query: 341 tacctttcttccggtgatggagacgggcacgacgagatcgacatggagttcatgggcaac 400 ||||| || ||||| || || ||||| ||||||||||||||||| ||||||||||||||| Sbjct: 326 tacctctcctccggcgagggcgacggccacgacgagatcgacatcgagttcatgggcaac 385
>emb|AJ295944.1|FPR295944 Festuca pratensis mRNA for Xet2 protein Length = 1189 Score = 127 bits (64), Expect = 4e-26 Identities = 115/132 (87%) Strand = Plus / Plus Query: 431 aacaccaacgtctgggtcaacggcgatggcaagaaggagcaccagttcgacctctggttc 490 ||||||||||| |||| || |||||| ||||||||||||||||||||| ||||||||||| Sbjct: 415 aacaccaacgtgtgggccagcggcgacggcaagaaggagcaccagttctacctctggttc 474 Query: 491 gaccccgccgccgactaccacacctacaccatcatctggaacccggagaacatcctcttc 550 || ||| ||||||| | ||||||||||| |||| ||||||||| |||||||| | ||| Sbjct: 475 gatccctccgccgatttccacacctacaagatcacctggaaccccaagaacatcatattc 534 Query: 551 aaggtggacaac 562 ||||||||||| Sbjct: 535 gaggtggacaac 546 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 368 cacgacgagatcgacatggagttcatgggcaactc 402 ||||| ||||||||||| ||||||||||| ||||| Sbjct: 358 cacgatgagatcgacattgagttcatggggaactc 392
>gb|AY105107.1| Zea mays PCO140468 mRNA sequence Length = 1297 Score = 117 bits (59), Expect = 4e-23 Identities = 116/135 (85%) Strand = Plus / Plus Query: 425 gtgctcaacaccaacgtctgggtcaacggcgatggcaagaaggagcaccagttcgacctc 484 ||||||||||| ||||| |||| ||||||||| ||||||||||||||||||||| |||| Sbjct: 468 gtgctcaacacgaacgtgtgggccaacggcgacggcaagaaggagcaccagttctacctg 527 Query: 485 tggttcgaccccgccgccgactaccacacctacaccatcatctggaacccggagaacatc 544 ||||||||||| |||||||||| ||||| |||| ||| |||||||| |||||||| Sbjct: 528 tggttcgacccggccgccgacttccacaaatacaagatcgtctggaacgacaagaacatc 587 Query: 545 ctcttcaaggtggac 559 ||||| |||||||| Sbjct: 588 atcttccaggtggac 602 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 370 cgacgagatcgacatggagttcatgggcaactccag 405 |||||||||||||||||||||||||||||||||||| Sbjct: 419 cgacgagatcgacatggagttcatgggcaactccag 454
>gb|AY589587.1| Triticum aestivum endotransglucosylase/hydrolase XTH3 mRNA, complete cds Length = 938 Score = 115 bits (58), Expect = 2e-22 Identities = 100/114 (87%) Strand = Plus / Plus Query: 431 aacaccaacgtctgggtcaacggcgatggcaagaaggagcaccagttcgacctctggttc 490 ||||||||||| |||| | |||||| || |||||||||||||||||| ||||||||||| Sbjct: 410 aacaccaacgtgtgggccggcggcgacgggaagaaggagcaccagttctacctctggttc 469 Query: 491 gaccccgccgccgactaccacacctacaccatcatctggaacccggagaacatc 544 |||||| ||||||||| ||||||||||| ||| |||||||||| |||||||| Sbjct: 470 gaccccaccgccgacttccacacctacaagatcgtctggaaccccaagaacatc 523 Score = 95.6 bits (48), Expect = 2e-16 Identities = 111/132 (84%) Strand = Plus / Plus Query: 269 tacctctacggtgagtttagcatccagatgaagctcatcccgggaaactcggccggcacc 328 ||||||||||| ||||| ||| ||||||||||||||||| || ||||| ||||||||| Sbjct: 254 tacctctacggcgagttcagcgtccagatgaagctcatcggcggcaactccgccggcacc 313 Query: 329 gtatcctgcttctacctttcttccggtgatggagacgggcacgacgagatcgacatggag 388 || ||| ||||||||| | || || || || ||||| || |||||||||||||| ||| Sbjct: 314 gtcacctccttctacctgacgtctggggagggcgacggccatgacgagatcgacatcgag 373 Query: 389 ttcatgggcaac 400 |||||||||||| Sbjct: 374 ttcatgggcaac 385
>gb|BT017812.1| Zea mays clone EL01N0507B07.c mRNA sequence Length = 1156 Score = 109 bits (55), Expect = 1e-20 Identities = 115/135 (85%) Strand = Plus / Plus Query: 425 gtgctcaacaccaacgtctgggtcaacggcgatggcaagaaggagcaccagttcgacctc 484 ||||||||||| ||||| |||| ||||||||| ||||| ||||||||||||||| |||| Sbjct: 304 gtgctcaacacgaacgtgtgggccaacggcgacggcaataaggagcaccagttctacctg 363 Query: 485 tggttcgaccccgccgccgactaccacacctacaccatcatctggaacccggagaacatc 544 ||||||||||| |||||||||| ||||| |||| ||| |||||||| |||||||| Sbjct: 364 tggttcgacccggccgccgacttccacaaatacaagatcgtctggaacgacaagaacatc 423 Query: 545 ctcttcaaggtggac 559 ||||| |||||||| Sbjct: 424 atcttccaggtggac 438 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 337 cttctacctttcttccggtgatggagacgggcacgacgagatcgacatggagttcatggg 396 ||||||||| | ||||| || || |||| |||||||||||||||||||||||||||||| Sbjct: 222 cttctacctgacgtccggcgagggcgacgagcacgacgagatcgacatggagttcatggg 281 Query: 397 caactccag 405 ||||||||| Sbjct: 282 caactccag 290
>ref|XM_473793.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 966 Score = 89.7 bits (45), Expect = 1e-14 Identities = 63/69 (91%) Strand = Plus / Plus Query: 466 ggagcaccagttcgacctctggttcgaccccgccgccgactaccacacctacaccatcat 525 |||||| |||||| ||||||||||||||||| ||||||||| ||||| |||||||||| | Sbjct: 429 ggagcagcagttctacctctggttcgaccccaccgccgacttccacaactacaccatcct 488 Query: 526 ctggaaccc 534 ||||||||| Sbjct: 489 ctggaaccc 497
>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08, complete sequence Length = 129037 Score = 89.7 bits (45), Expect = 1e-14 Identities = 63/69 (91%) Strand = Plus / Minus Query: 466 ggagcaccagttcgacctctggttcgaccccgccgccgactaccacacctacaccatcat 525 |||||| |||||| ||||||||||||||||| ||||||||| ||||| |||||||||| | Sbjct: 32621 ggagcagcagttctacctctggttcgaccccaccgccgacttccacaactacaccatcct 32562 Query: 526 ctggaaccc 534 ||||||||| Sbjct: 32561 ctggaaccc 32553 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 467 gagcaccagttcgacctctggttcgaccccgccgccgactaccacacctacaccatcatc 526 ||||| |||||| |||||||||||||||| |||||||||||||||||||| ||||| || Sbjct: 29252 gagcagcagttccgcctctggttcgaccccaccgccgactaccacacctactccatcgtc 29311 Query: 527 tggaaccc 534 |||||||| Sbjct: 29312 tggaaccc 29319 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 368 cacgacgagatcgacatggagttcatgggcaac 400 ||||||||||||||| |||||||| | |||||| Sbjct: 29159 cacgacgagatcgacctggagttcctcggcaac 29191
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 89.7 bits (45), Expect = 1e-14 Identities = 63/69 (91%) Strand = Plus / Minus Query: 466 ggagcaccagttcgacctctggttcgaccccgccgccgactaccacacctacaccatcat 525 |||||| |||||| ||||||||||||||||| ||||||||| ||||| |||||||||| | Sbjct: 30556913 ggagcagcagttctacctctggttcgaccccaccgccgacttccacaactacaccatcct 30556854 Query: 526 ctggaaccc 534 ||||||||| Sbjct: 30556853 ctggaaccc 30556845 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 467 gagcaccagttcgacctctggttcgaccccgccgccgactaccacacctacaccatcatc 526 ||||| |||||| |||||||||||||||| |||||||||||||||||||| ||||| || Sbjct: 30553544 gagcagcagttccgcctctggttcgaccccaccgccgactaccacacctactccatcgtc 30553603 Query: 527 tggaaccc 534 |||||||| Sbjct: 30553604 tggaaccc 30553611 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 467 gagcaccagttcgacctctggttcgaccccgccgccgactaccacacctacaccatcatc 526 ||||| |||||| ||||||||||||||||| || |||||| |||||||||| ||||| || Sbjct: 30516931 gagcagcagttccacctctggttcgaccccaccaccgacttccacacctactccatcgtc 30516872 Query: 527 tgga 530 |||| Sbjct: 30516871 tgga 30516868 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 477 tcgacctctggttcgaccccgccgccgactaccacacctacaccatcatctggaaccc 534 ||||||| |||||||||||| ||||||||| |||||||||| || | |||||||||| Sbjct: 32180524 tcgacctgtggttcgaccccaccgccgacttccacacctacgccgtgctctggaaccc 32180581 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 368 cacgacgagatcgacatggagttcatgggcaac 400 ||||||||||||||| |||||||| |||||||| Sbjct: 30508420 cacgacgagatcgacctggagttcctgggcaac 30508388 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 368 cacgacgagatcgacatggagttcatgggcaac 400 ||||||||||||||| |||||||| | |||||| Sbjct: 30553451 cacgacgagatcgacctggagttcctcggcaac 30553483
>dbj|AK059203.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-A11, full insert sequence Length = 1234 Score = 89.7 bits (45), Expect = 1e-14 Identities = 63/69 (91%) Strand = Plus / Plus Query: 466 ggagcaccagttcgacctctggttcgaccccgccgccgactaccacacctacaccatcat 525 |||||| |||||| ||||||||||||||||| ||||||||| ||||| |||||||||| | Sbjct: 497 ggagcagcagttctacctctggttcgaccccaccgccgacttccacaactacaccatcct 556 Query: 526 ctggaaccc 534 ||||||||| Sbjct: 557 ctggaaccc 565
>ref|XM_473792.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 570 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 467 gagcaccagttcgacctctggttcgaccccgccgccgactaccacacctacaccatcatc 526 ||||| |||||| |||||||||||||||| |||||||||||||||||||| ||||| || Sbjct: 418 gagcagcagttccgcctctggttcgaccccaccgccgactaccacacctactccatcgtc 477 Query: 527 tggaaccc 534 |||||||| Sbjct: 478 tggaaccc 485 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 368 cacgacgagatcgacatggagttcatgggcaac 400 ||||||||||||||| |||||||| | |||||| Sbjct: 325 cacgacgagatcgacctggagttcctcggcaac 357
>gb|AY103775.1| Zea mays PCO076979 mRNA sequence Length = 1495 Score = 83.8 bits (42), Expect = 6e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 466 ggagcaccagttcgacctctggttcgaccccgccgccgactaccacacctacaccatcat 525 |||||| |||||| |||||||||||||||| ||||||||| |||||||||| ||||| | Sbjct: 527 ggagcagcagttccgcctctggttcgaccccaccgccgacttccacacctactccatcct 586 Query: 526 ctggaacccggagaacatcctcttcaaggtggac 559 ||||||||| || || || |||||| ||||||| Sbjct: 587 ctggaaccccaagcacgtcatcttcatggtggac 620 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Plus Query: 367 gcacgacgagatcgacatggagttcatgggcaac 400 |||||||||||||||| | |||||| |||||||| Sbjct: 434 gcacgacgagatcgacttcgagttcctgggcaac 467
>ref|XM_480875.1| Oryza sativa (japonica cultivar-group), mRNA Length = 906 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 467 gagcaccagttcgacctctggttcgaccccgccgccgactaccacacctacaccatcatc 526 ||||| |||||| |||||||||||||||| ||||||||| |||||||||| ||||| || Sbjct: 439 gagcagcagttccgcctctggttcgaccccaccgccgacttccacacctactccatcgtc 498 Query: 527 tggaaccc 534 |||||||| Sbjct: 499 tggaaccc 506
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 467 gagcaccagttcgacctctggttcgaccccgccgccgactaccacacctacaccatcatc 526 ||||| ||||||| ||||||||||||||| ||||||||| |||||||||| ||||| || Sbjct: 28754807 gagcagcagttcgtgctctggttcgaccccaccgccgacttccacacctactccatcctc 28754866 Query: 527 tggaaccc 534 |||||||| Sbjct: 28754867 tggaaccc 28754874 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 484 ctggttcgaccccgccgccgactaccacacctacaccatcatctggaaccc 534 ||||||||||||| ||| || |||||||| |||||||||| |||||||||| Sbjct: 13230512 ctggttcgaccccaccgacggctaccacaactacaccatcttctggaaccc 13230562 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 368 cacgacgagatcgacatggagttcatgggcaactccagtggcc 410 ||||||||||||||| | |||||| ||||||||||||| |||| Sbjct: 13230402 cacgacgagatcgacttcgagttcctgggcaactccagcggcc 13230444 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 481 cctctggttcgaccccgccgccgactaccacacctacaccatcatctggaaccc 534 |||||||||||||||||| ||||||| ||| |||| ||||| |||||||||| Sbjct: 7156118 cctctggttcgaccccgctgccgacttccatgactactccatcctctggaaccc 7156065 Score = 48.1 bits (24), Expect = 0.033 Identities = 57/68 (83%) Strand = Plus / Plus Query: 467 gagcaccagttcgacctctggttcgaccccgccgccgactaccacacctacaccatcatc 526 ||||| |||||| |||||||||||||||| || || |||||||||| |||||||| Sbjct: 28750067 gagcagcagttccgcctctggttcgaccccacccagtccttccacacctactccatcatc 28750126 Query: 527 tggaaccc 534 |||||||| Sbjct: 28750127 tggaaccc 28750134
>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0028E05 Length = 157631 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 467 gagcaccagttcgacctctggttcgaccccgccgccgactaccacacctacaccatcatc 526 ||||| ||||||| ||||||||||||||| ||||||||| |||||||||| ||||| || Sbjct: 62582 gagcagcagttcgtgctctggttcgaccccaccgccgacttccacacctactccatcctc 62641 Query: 527 tggaaccc 534 |||||||| Sbjct: 62642 tggaaccc 62649 Score = 48.1 bits (24), Expect = 0.033 Identities = 57/68 (83%) Strand = Plus / Plus Query: 467 gagcaccagttcgacctctggttcgaccccgccgccgactaccacacctacaccatcatc 526 ||||| |||||| |||||||||||||||| || || |||||||||| |||||||| Sbjct: 57842 gagcagcagttccgcctctggttcgaccccacccagtccttccacacctactccatcatc 57901 Query: 527 tggaaccc 534 |||||||| Sbjct: 57902 tggaaccc 57909
>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0622F03 Length = 170064 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 467 gagcaccagttcgacctctggttcgaccccgccgccgactaccacacctacaccatcatc 526 ||||| ||||||| ||||||||||||||| ||||||||| |||||||||| ||||| || Sbjct: 155373 gagcagcagttcgtgctctggttcgaccccaccgccgacttccacacctactccatcctc 155432 Query: 527 tggaaccc 534 |||||||| Sbjct: 155433 tggaaccc 155440 Score = 48.1 bits (24), Expect = 0.033 Identities = 57/68 (83%) Strand = Plus / Plus Query: 467 gagcaccagttcgacctctggttcgaccccgccgccgactaccacacctacaccatcatc 526 ||||| |||||| |||||||||||||||| || || |||||||||| |||||||| Sbjct: 150633 gagcagcagttccgcctctggttcgaccccacccagtccttccacacctactccatcatc 150692 Query: 527 tggaaccc 534 |||||||| Sbjct: 150693 tggaaccc 150700
>gb|BT017470.1| Zea mays clone EL01N0408C10.c mRNA sequence Length = 878 Score = 73.8 bits (37), Expect = 6e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 482 ctctggttcgaccccgccgccgactaccacacctacaccatcatctggaaccc 534 ||||||||||||||| ||||||||| |||||||||| ||||| |||||||||| Sbjct: 262 ctctggttcgaccccaccgccgacttccacacctacgccatcctctggaaccc 314
>ref|XM_473788.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 822 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 467 gagcaccagttcgacctctggttcgaccccgccgccgactaccacacctacaccatcatc 526 ||||| |||||| ||||||||||||||||| || |||||| |||||||||| ||||| || Sbjct: 385 gagcagcagttccacctctggttcgaccccaccaccgacttccacacctactccatcgtc 444 Query: 527 tgga 530 |||| Sbjct: 445 tgga 448
>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02, complete sequence Length = 166804 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 467 gagcaccagttcgacctctggttcgaccccgccgccgactaccacacctacaccatcatc 526 ||||| |||||| ||||||||||||||||| || |||||| |||||||||| ||||| || Sbjct: 150308 gagcagcagttccacctctggttcgaccccaccaccgacttccacacctactccatcgtc 150249 Query: 527 tgga 530 |||| Sbjct: 150248 tgga 150245 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 368 cacgacgagatcgacatggagttcatgggcaac 400 ||||||||||||||| |||||||| |||||||| Sbjct: 141797 cacgacgagatcgacctggagttcctgggcaac 141765
>gb|AF443603.1|AF443603 Oryza sativa xyloglucan endotransglycosylase mRNA, complete cds Length = 1162 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 467 gagcaccagttcgacctctggttcgaccccgccgccgactaccacacctacaccatcatc 526 ||||| |||||| ||||||||||||||||| || |||||| |||||||||| ||||| || Sbjct: 457 gagcagcagttccacctctggttcgaccccaccaccgacttccacacctactccatcgtc 516 Query: 527 tgga 530 |||| Sbjct: 517 tgga 520
>dbj|AK070734.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062B10, full insert sequence Length = 1109 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 467 gagcaccagttcgacctctggttcgaccccgccgccgactaccacacctacaccatcatc 526 ||||| |||||| ||||||||||||||||| || |||||| |||||||||| ||||| || Sbjct: 475 gagcagcagttccacctctggttcgaccccaccaccgacttccacacctactccatcgtc 534 Query: 527 tgga 530 |||| Sbjct: 535 tgga 538
>emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEA) Length = 1174 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 466 ggagcaccagttcgacctctggttcgaccccgccgccgactaccacacctacaccatcat 525 |||||| |||||| |||||||||||| ||| || ||||| |||||||||| ||||| | Sbjct: 423 ggagcaacagttccgcctctggttcgatcccaccaacgacttccacacctactccatcct 482 Query: 526 ctggaacccggagaacatcctcttcaaggtggac 559 ||||||||| || ||||| |||||| ||||||| Sbjct: 483 ctggaacccaaagcacatcatcttcatggtggac 516
>ref|NM_187656.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 783 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 475 gttcgacctctggttcgaccccgccgccgactaccacacctacaccatcatctggaaccc 534 |||| ||||||||||||||||| ||||||||| |||| |||| ||||| |||||||||| Sbjct: 348 gttccacctctggttcgaccccaccgccgacttccaccactacgccatcctctggaaccc 407
>gb|BT019084.1| Zea mays clone Contig673.F mRNA sequence Length = 977 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 466 ggagcaccagttcgacctctggttcgaccccgccgccgactaccacacctac 517 |||||| |||||| |||||||||||||||| ||||||||| |||||||||| Sbjct: 706 ggagcagcagttccgcctctggttcgaccccaccgccgacttccacacctac 655 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 362 gacgggcacgacgagatcgacatggagttcatgggcaac 400 |||| |||||||||||||||| |||||||| |||||||| Sbjct: 804 gacgcgcacgacgagatcgacctggagttcctgggcaac 766
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 475 gttcgacctctggttcgaccccgccgccgactaccacacctacaccatcatctggaaccc 534 |||| ||||||||||||||||| ||||||||| |||| |||| ||||| |||||||||| Sbjct: 471775 gttccacctctggttcgaccccaccgccgacttccaccactacgccatcctctggaaccc 471716
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 475 gttcgacctctggttcgaccccgccgccgactaccacacctacaccatcatctggaaccc 534 |||| ||||||||||||||||| ||||||||| |||| |||| ||||| |||||||||| Sbjct: 471773 gttccacctctggttcgaccccaccgccgacttccaccactacgccatcctctggaaccc 471714
>dbj|AK119538.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-C03, full insert sequence Length = 1281 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 475 gttcgacctctggttcgaccccgccgccgactaccacacctacaccatcatctggaaccc 534 |||| ||||||||||||||||| ||||||||| |||| |||| ||||| |||||||||| Sbjct: 668 gttccacctctggttcgaccccaccgccgacttccaccactacgccatcctctggaaccc 727
>dbj|AK104060.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-G01, full insert sequence Length = 1186 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 475 gttcgacctctggttcgaccccgccgccgactaccacacctacaccatcatctggaaccc 534 |||| ||||||||||||||||| ||||||||| |||| |||| ||||| |||||||||| Sbjct: 573 gttccacctctggttcgaccccaccgccgacttccaccactacgccatcctctggaaccc 632
>dbj|AK061126.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-G12, full insert sequence Length = 1193 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 475 gttcgacctctggttcgaccccgccgccgactaccacacctacaccatcatctggaaccc 534 |||| ||||||||||||||||| ||||||||| |||| |||| ||||| |||||||||| Sbjct: 580 gttccacctctggttcgaccccaccgccgacttccaccactacgccatcctctggaaccc 639
>gb|AY106776.1| Zea mays PCO076978 mRNA sequence Length = 974 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 466 ggagcaccagttcgacctctggttcgaccccgccgccgactaccacacctac 517 |||||| |||||| |||||||||||||||| ||||||||| |||||||||| Sbjct: 498 ggagcagcagttccgcctctggttcgaccccaccgccgacttccacacctac 549 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 362 gacgggcacgacgagatcgacatggagttcatgggcaac 400 |||| |||||||||||||||| |||||||| |||||||| Sbjct: 400 gacgcgcacgacgagatcgacctggagttcctgggcaac 438
>gb|AC113930.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1384D03, complete sequence Length = 116214 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 475 gttcgacctctggttcgaccccgccgccgactaccacacctacaccatcatctggaaccc 534 |||| ||||||||||||||||| ||||||||| |||| |||| ||||| |||||||||| Sbjct: 70235 gttccacctctggttcgaccccaccgccgacttccaccactacgccatcctctggaaccc 70176
>ref|NM_187323.1| Oryza sativa (japonica cultivar-group), mRNA Length = 906 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 480 acctctggttcgaccccgccgccgactaccacacctacaccatcatctggaaccc 534 ||||||||||||||||| ||||||||| |||| |||| ||||| |||||||||| Sbjct: 482 acctctggttcgaccccaccgccgacttccaccactacgccatcctctggaaccc 536 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 368 cacgacgagatcgacatggagttcatgggca 398 |||||||||||||||||||||||| |||||| Sbjct: 361 cacgacgagatcgacatggagttcctgggca 391
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 480 acctctggttcgaccccgccgccgactaccacacctacaccatcatctggaaccc 534 ||||||||||||||||| ||||||||| |||| |||| ||||| |||||||||| Sbjct: 17438397 acctctggttcgaccccaccgccgacttccaccactacgccatcctctggaaccc 17438451 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 485 tggttcgaccccgccgccgactaccacacctacaccatcatctggaaccc 534 |||||||||||| ||||||||| |||| ||||| ||||| |||||||||| Sbjct: 20676569 tggttcgaccccaccgccgacttccactcctactccatcctctggaaccc 20676618 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 368 cacgacgagatcgacatggagttcatgggca 398 |||||||||||||||||||||||| |||||| Sbjct: 17438276 cacgacgagatcgacatggagttcctgggca 17438306
>dbj|AP004299.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0434A03 Length = 146505 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 480 acctctggttcgaccccgccgccgactaccacacctacaccatcatctggaaccc 534 ||||||||||||||||| ||||||||| |||| |||| ||||| |||||||||| Sbjct: 106621 acctctggttcgaccccaccgccgacttccaccactacgccatcctctggaaccc 106675 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 368 cacgacgagatcgacatggagttcatgggca 398 |||||||||||||||||||||||| |||||| Sbjct: 106500 cacgacgagatcgacatggagttcctgggca 106530
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0012F14 Length = 168629 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 484 ctggttcgaccccgccgccgactaccacacctacaccatcatctggaaccc 534 ||||||||||||| ||| || |||||||| |||||||||| |||||||||| Sbjct: 147700 ctggttcgaccccaccgacggctaccacaactacaccatcttctggaaccc 147750 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 368 cacgacgagatcgacatggagttcatgggcaactccagtggcc 410 ||||||||||||||| | |||||| ||||||||||||| |||| Sbjct: 147590 cacgacgagatcgacttcgagttcctgggcaactccagcggcc 147632
>dbj|AK063497.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-D06, full insert sequence Length = 1439 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 484 ctggttcgaccccgccgccgactaccacacctacaccatcatctggaaccc 534 ||||||||||||| ||| || |||||||| |||||||||| |||||||||| Sbjct: 753 ctggttcgaccccaccgacggctaccacaactacaccatcttctggaaccc 803 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 368 cacgacgagatcgacatggagttcatgggcaactccagtggcc 410 ||||||||||||||| | |||||| ||||||||||||| |||| Sbjct: 643 cacgacgagatcgacttcgagttcctgggcaactccagcggcc 685
>ref|XM_478514.1| Oryza sativa (japonica cultivar-group), mRNA Length = 930 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 485 tggttcgaccccgccgccgactaccacacctacaccatcatctggaaccc 534 |||||||||||| ||||||||| |||| ||||| ||||| |||||||||| Sbjct: 454 tggttcgaccccaccgccgacttccactcctactccatcctctggaaccc 503
>ref|XM_478515.1| Oryza sativa (japonica cultivar-group), mRNA Length = 657 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 485 tggttcgaccccgccgccgactaccacacctacaccatcatctggaaccc 534 |||||||||||| ||||||||| |||| ||||| ||||| |||||||||| Sbjct: 546 tggttcgaccccaccgccgacttccactcctactccatcctctggaaccc 595
>emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEB) Length = 1226 Score = 60.0 bits (30), Expect = 9e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 466 ggagcaccagttcgacctctggttcgaccccgccgccgactaccacacctacaccatcat 525 |||||| |||||| |||||||||||||||| || | || |||||||||| ||||||| Sbjct: 484 ggagcagcagttccgcctctggttcgaccccaccaaggccttccacacctactccatcat 543 Query: 526 ctggaacccg 535 |||||||||| Sbjct: 544 ctggaacccg 553 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Plus Query: 367 gcacgacgagatcgacatggagttcatgggcaac 400 |||||||||||||||| | |||||| |||||||| Sbjct: 391 gcacgacgagatcgacttcgagttcctgggcaac 424
>emb|AL606650.5|OSJN00097 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015D13, complete sequence Length = 127135 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 477 tcgacctctggttcgaccccgccgccgactaccacacctacaccatcatctggaaccc 534 ||||||| |||||||||||| ||||||||| |||||||||| || | |||||||||| Sbjct: 76213 tcgacctgtggttcgaccccaccgccgacttccacacctacgccgtgctctggaaccc 76270
>gb|AY589589.1| Triticum aestivum endotransglucosylase/hydrolase XTH5 mRNA, complete cds Length = 1056 Score = 60.0 bits (30), Expect = 9e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 466 ggagcaccagttcgacctctggttcgaccccgccgccgactaccacacctacaccatcat 525 |||||| |||||| |||||||||||||||| || | || |||||||||| ||||||| Sbjct: 378 ggagcagcagttccgcctctggttcgaccccaccaaggccttccacacctactccatcat 437 Query: 526 ctggaacccg 535 |||||||||| Sbjct: 438 ctggaacccg 447 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Plus Query: 367 gcacgacgagatcgacatggagttcatgggcaac 400 |||||||||||||||| | |||||| |||||||| Sbjct: 285 gcacgacgagatcgacttcgagttcctgggcaac 318
>dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0681F05 Length = 144741 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 485 tggttcgaccccgccgccgactaccacacctacaccatcatctggaaccc 534 |||||||||||| ||||||||| |||| ||||| ||||| |||||||||| Sbjct: 29319 tggttcgaccccaccgccgacttccactcctactccatcctctggaaccc 29368
>dbj|AK111340.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-F07, full insert sequence Length = 658 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 485 tggttcgaccccgccgccgactaccacacctacaccatcatctggaaccc 534 |||||||||||| ||||||||| |||| ||||| ||||| |||||||||| Sbjct: 546 tggttcgaccccaccgccgacttccactcctactccatcctctggaaccc 595
>dbj|AK099331.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024P08, full insert sequence Length = 1199 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 477 tcgacctctggttcgaccccgccgccgactaccacacctacaccatcatctggaaccc 534 ||||||| |||||||||||| ||||||||| |||||||||| || | |||||||||| Sbjct: 435 tcgacctgtggttcgaccccaccgccgacttccacacctacgccgtgctctggaaccc 492
>dbj|AK073731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033064P12, full insert sequence Length = 1707 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 485 tggttcgaccccgccgccgactaccacacctacaccatcatctggaaccc 534 |||||||||||| ||||||||| |||| ||||| ||||| |||||||||| Sbjct: 640 tggttcgaccccaccgccgacttccactcctactccatcctctggaaccc 689
>dbj|AK059277.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-C07, full insert sequence Length = 1279 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 477 tcgacctctggttcgaccccgccgccgactaccacacctacaccatcatctggaaccc 534 ||||||| |||||||||||| ||||||||| |||||||||| || | |||||||||| Sbjct: 439 tcgacctgtggttcgaccccaccgccgacttccacacctacgccgtgctctggaaccc 496
>emb|AL732336.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0105C05, complete sequence Length = 62215 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 477 tcgacctctggttcgaccccgccgccgactaccacacctacaccatcatctggaaccc 534 ||||||| |||||||||||| ||||||||| |||||||||| || | |||||||||| Sbjct: 31700 tcgacctgtggttcgaccccaccgccgacttccacacctacgccgtgctctggaaccc 31757
>ref|XM_468468.1| Oryza sativa (japonica cultivar-group), mRNA Length = 984 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 474 agttcgacctctggttcgaccccgccgccgactaccacacctacaccatcatctgga 530 ||||| ||||||||||||||||| ||||||||| |||| |||| ||||| |||||| Sbjct: 497 agttccacctctggttcgaccccaccgccgacttccaccactacgccatcctctgga 553
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 474 agttcgacctctggttcgaccccgccgccgactaccacacctacaccatcatctgga 530 ||||| ||||||||||||||||| ||||||||| |||| |||| ||||| |||||| Sbjct: 35396754 agttccacctctggttcgaccccaccgccgacttccaccactacgccatcctctgga 35396698 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Plus Query: 367 gcacgacgagatcgacatggagttcatgggcaac 400 |||||||||||||||| | |||||| |||||||| Sbjct: 10359113 gcacgacgagatcgacttcgagttcctgggcaac 10359146
>dbj|AP003989.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1063_D06 Length = 102439 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 474 agttcgacctctggttcgaccccgccgccgactaccacacctacaccatcatctgga 530 ||||| ||||||||||||||||| ||||||||| |||| |||| ||||| |||||| Sbjct: 8275 agttccacctctggttcgaccccaccgccgacttccaccactacgccatcctctgga 8219
>dbj|AP004026.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C04 Length = 103194 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 474 agttcgacctctggttcgaccccgccgccgactaccacacctacaccatcatctgga 530 ||||| ||||||||||||||||| ||||||||| |||| |||| ||||| |||||| Sbjct: 57302 agttccacctctggttcgaccccaccgccgacttccaccactacgccatcctctgga 57246
>ref|NM_197613.1| Oryza sativa (japonica cultivar-group) putative cellulase (OSJNBa0001O14.5), mRNA Length = 969 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 480 acctctggttcgaccccgccgccgactaccacacctacaccatcatctggaaccc 534 ||||||||||||||||| |||||| || |||| |||| ||||| |||||||||| Sbjct: 539 acctctggttcgaccccaccgccggcttccaccactacgccatcctctggaaccc 593 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 cacgacgagatcgacatggag 388 ||||||||||||||||||||| Sbjct: 418 cacgacgagatcgacatggag 438
>gb|AC025783.10| Oryza sativa chromosome 10 BAC OSJNBa0001O14 genomic sequence, complete sequence Length = 178022 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 480 acctctggttcgaccccgccgccgactaccacacctacaccatcatctggaaccc 534 ||||||||||||||||| |||||| || |||| |||| ||||| |||||||||| Sbjct: 64150 acctctggttcgaccccaccgccggcttccaccactacgccatcctctggaaccc 64204 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 cacgacgagatcgacatggag 388 ||||||||||||||||||||| Sbjct: 64029 cacgacgagatcgacatggag 64049
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 480 acctctggttcgaccccgccgccgactaccacacctacaccatcatctggaaccc 534 ||||||||||||||||| |||||| || |||| |||| ||||| |||||||||| Sbjct: 20801751 acctctggttcgaccccaccgccggcttccaccactacgccatcctctggaaccc 20801805 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 cacgacgagatcgacatggag 388 ||||||||||||||||||||| Sbjct: 20801630 cacgacgagatcgacatggag 20801650
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 480 acctctggttcgaccccgccgccgactaccacacctacaccatcatctggaaccc 534 ||||||||||||||||| |||||| || |||| |||| ||||| |||||||||| Sbjct: 20813015 acctctggttcgaccccaccgccggcttccaccactacgccatcctctggaaccc 20813069 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 cacgacgagatcgacatggag 388 ||||||||||||||||||||| Sbjct: 20812894 cacgacgagatcgacatggag 20812914
>dbj|AP004995.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0068B06 Length = 143712 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 481 cctctggttcgaccccgccgccgactaccacacctacaccatcatctggaaccc 534 |||||||||||||||||| ||||||| ||| |||| ||||| |||||||||| Sbjct: 33529 cctctggttcgaccccgctgccgacttccatgactactccatcctctggaaccc 33476
>ref|XM_480899.1| Oryza sativa (japonica cultivar-group), mRNA Length = 873 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 503 gactaccacacctacaccatcatctggaacccg 535 |||| ||| |||||||||||||||||||||||| Sbjct: 442 gacttccatacctacaccatcatctggaacccg 474
>ref|XM_473787.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 882 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 368 cacgacgagatcgacatggagttcatgggcaac 400 ||||||||||||||| |||||||| |||||||| Sbjct: 316 cacgacgagatcgacctggagttcctgggcaac 348
>dbj|AP005249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0087F21 Length = 187401 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 503 gactaccacacctacaccatcatctggaacccg 535 |||| ||| |||||||||||||||||||||||| Sbjct: 278 gacttccatacctacaccatcatctggaacccg 310
>dbj|AP004657.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0031C02 Length = 138843 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 503 gactaccacacctacaccatcatctggaacccg 535 |||| ||| |||||||||||||||||||||||| Sbjct: 17910 gacttccatacctacaccatcatctggaacccg 17942 Score = 48.1 bits (24), Expect = 0.033 Identities = 45/52 (86%) Strand = Plus / Plus Query: 482 ctctggttcgaccccgccgccgactaccacacctacaccatcatctggaacc 533 |||||||| || ||| | || |||| ||| |||||||||||||||||||||| Sbjct: 12082 ctctggtttgatcccactgcagacttccatacctacaccatcatctggaacc 12133
>dbj|AK063614.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-D08, full insert sequence Length = 1041 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 368 cacgacgagatcgacatggagttcatgggcaac 400 ||||||||||||||| |||||||| |||||||| Sbjct: 379 cacgacgagatcgacctggagttcctgggcaac 411
>ref|XM_480898.1| Oryza sativa (japonica cultivar-group), mRNA Length = 861 Score = 48.1 bits (24), Expect = 0.033 Identities = 45/52 (86%) Strand = Plus / Plus Query: 482 ctctggttcgaccccgccgccgactaccacacctacaccatcatctggaacc 533 |||||||| || ||| | || |||| ||| |||||||||||||||||||||| Sbjct: 415 ctctggtttgatcccactgcagacttccatacctacaccatcatctggaacc 466
>gb|BT014685.1| Oryza sativa AK104912 mRNA sequence Length = 807 Score = 48.1 bits (24), Expect = 0.033 Identities = 57/68 (83%) Strand = Plus / Plus Query: 467 gagcaccagttcgacctctggttcgaccccgccgccgactaccacacctacaccatcatc 526 ||||| |||||| |||||||||||||||| || || |||||||||| |||||||| Sbjct: 373 gagcagcagttccgcctctggttcgaccccacccagtccttccacacctactccatcatc 432 Query: 527 tggaaccc 534 |||||||| Sbjct: 433 tggaaccc 440
>gb|AE011669.1| Xanthomonas axonopodis pv. citri str. 306, section 47 of 469 of the complete genome Length = 10615 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 109 cttggtggcgctctcgcaggccgc 132 |||||||||||||||||||||||| Sbjct: 7916 cttggtggcgctctcgcaggccgc 7939
>dbj|AP003907.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1217_D10 Length = 103188 Score = 48.1 bits (24), Expect = 0.033 Identities = 45/52 (86%) Strand = Plus / Plus Query: 482 ctctggttcgaccccgccgccgactaccacacctacaccatcatctggaacc 533 |||||||| || ||| | || |||| ||| |||||||||||||||||||||| Sbjct: 98256 ctctggtttgatcccactgcagacttccatacctacaccatcatctggaacc 98307
>dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C02, full insert sequence Length = 1208 Score = 48.1 bits (24), Expect = 0.033 Identities = 57/68 (83%) Strand = Plus / Plus Query: 467 gagcaccagttcgacctctggttcgaccccgccgccgactaccacacctacaccatcatc 526 ||||| |||||| |||||||||||||||| || || |||||||||| |||||||| Sbjct: 481 gagcagcagttccgcctctggttcgaccccacccagtccttccacacctactccatcatc 540 Query: 527 tggaaccc 534 |||||||| Sbjct: 541 tggaaccc 548
>dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059H08, full insert sequence Length = 1208 Score = 48.1 bits (24), Expect = 0.033 Identities = 57/68 (83%) Strand = Plus / Plus Query: 467 gagcaccagttcgacctctggttcgaccccgccgccgactaccacacctacaccatcatc 526 ||||| |||||| |||||||||||||||| || || |||||||||| |||||||| Sbjct: 481 gagcagcagttccgcctctggttcgaccccacccagtccttccacacctactccatcatc 540 Query: 527 tggaaccc 534 |||||||| Sbjct: 541 tggaaccc 548
>gb|AY103891.1| Zea mays PCO065722 mRNA sequence Length = 1280 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 362 gacgggcacgacgagatcgacatggagttcatgggcaac 400 |||| |||||||||||||||| | |||||| |||||||| Sbjct: 411 gacgcgcacgacgagatcgacttcgagttcctgggcaac 449 Score = 44.1 bits (22), Expect = 0.52 Identities = 58/70 (82%) Strand = Plus / Plus Query: 466 ggagcaccagttcgacctctggttcgaccccgccgccgactaccacacctacaccatcat 525 |||||| |||||| ||||||||||||||| || | | || |||||||||| ||||| | Sbjct: 509 ggagcagcagttccgcctctggttcgaccctaccactgccttccacacctactccatcct 568 Query: 526 ctggaacccg 535 ||||||||| Sbjct: 569 gtggaacccg 578
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 44.1 bits (22), Expect = 0.52 Identities = 46/54 (85%) Strand = Plus / Plus Query: 480 acctctggttcgaccccgccgccgactaccacacctacaccatcatctggaacc 533 ||||||||||||||||| || ||||||||| ||||| || || ||||||||| Sbjct: 113580 acctctggttcgaccccaccaaggactaccactcctactccgtcctctggaacc 113633
>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007D07, complete sequence Length = 133930 Score = 44.1 bits (22), Expect = 0.52 Identities = 46/54 (85%) Strand = Plus / Plus Query: 480 acctctggttcgaccccgccgccgactaccacacctacaccatcatctggaacc 533 ||||||||||||||||| || ||||||||| ||||| || || ||||||||| Sbjct: 13199 acctctggttcgaccccaccaaggactaccactcctactccgtcctctggaacc 13252
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.52 Identities = 46/54 (85%) Strand = Plus / Plus Query: 480 acctctggttcgaccccgccgccgactaccacacctacaccatcatctggaacc 533 ||||||||||||||||| || ||||||||| ||||| || || ||||||||| Sbjct: 19010382 acctctggttcgaccccaccaaggactaccactcctactccgtcctctggaacc 19010435
>dbj|AB196975.1| Sagittaria pygmaea SpXTH2 mRNA for xyloglucan endotransglucosylase/hydrolase, partial cds Length = 708 Score = 44.1 bits (22), Expect = 0.52 Identities = 64/78 (82%) Strand = Plus / Plus Query: 473 cagttcgacctctggttcgaccccgccgccgactaccacacctacaccatcatctggaac 532 |||||| ||||||||||||| ||| || |||| ||||| ||||| ||| |||||||| Sbjct: 173 cagttccacctctggttcgatcccaccaaggactttcacacttacactatcctctggaac 232 Query: 533 ccggagaacatcctcttc 550 ||| || ||||| ||||| Sbjct: 233 ccgcagcacatcatcttc 250 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 368 cacgacgagatcgacatggagttcatgggcaactccag 405 ||||||||||||||| | |||||| |||||||| |||| Sbjct: 74 cacgacgagatcgacttcgagttcctgggcaacaccag 111
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 100 cgcggtcgtcttggtggcgctctcgc 125 |||||||||||||||| ||||||||| Sbjct: 4534987 cgcggtcgtcttggtgacgctctcgc 4535012
>dbj|AP005398.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0669G10 Length = 133372 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Plus Query: 367 gcacgacgagatcgacatggagttcatgggcaac 400 |||||||||||||||| | |||||| |||||||| Sbjct: 1535 gcacgacgagatcgacttcgagttcctgggcaac 1568
>dbj|AP004872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0444A09 Length = 125900 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Plus Query: 367 gcacgacgagatcgacatggagttcatgggcaac 400 |||||||||||||||| | |||||| |||||||| Sbjct: 124923 gcacgacgagatcgacttcgagttcctgggcaac 124956
>dbj|AK071574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105D14, full insert sequence Length = 977 Score = 44.1 bits (22), Expect = 0.52 Identities = 46/54 (85%) Strand = Plus / Plus Query: 480 acctctggttcgaccccgccgccgactaccacacctacaccatcatctggaacc 533 ||||||||||||||||| || ||||||||| ||||| || || ||||||||| Sbjct: 449 acctctggttcgaccccaccaaggactaccactcctactccgtcctctggaacc 502
>dbj|AK061093.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-A02, full insert sequence Length = 1053 Score = 44.1 bits (22), Expect = 0.52 Identities = 46/54 (85%) Strand = Plus / Plus Query: 480 acctctggttcgaccccgccgccgactaccacacctacaccatcatctggaacc 533 ||||||||||||||||| || ||||||||| ||||| || || ||||||||| Sbjct: 446 acctctggttcgaccccaccaaggactaccactcctactccgtcctctggaacc 499
>emb|AM260926.1| Uncultured fungus 18S rRNA gene (partial), ITS1, 5.8S rRNA gene, ITS2 and 28S rRNA gene (partial), clone C910 Length = 1370 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 344 ctttcttccggtgatggagacg 365 |||||||||||||||||||||| Sbjct: 438 ctttcttccggtgatggagacg 417
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.52 Identities = 46/54 (85%) Strand = Plus / Plus Query: 480 acctctggttcgaccccgccgccgactaccacacctacaccatcatctggaacc 533 ||||||||||||||||| || ||||||||| ||||| || || ||||||||| Sbjct: 19169031 acctctggttcgaccccaccaaggactaccactcctactccgtcctctggaacc 19169084
>ref|XM_583457.2| PREDICTED: Bos taurus similar to carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 (LOC506932), mRNA Length = 2104 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 54 ctagtccaggggcagccacaa 74 ||||||||||||||||||||| Sbjct: 1953 ctagtccaggggcagccacaa 1933
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 577 cttcaagcgcttcgccggcat 597 ||||||||||||||||||||| Sbjct: 6226233 cttcaagcgcttcgccggcat 6226253
>gb|AY103552.1| Zea mays PCO075057 mRNA sequence Length = 1380 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 477 tcgacctctggttcgaccccgccgccgactaccacac 513 ||||||| |||||||||||| | ||||||| |||||| Sbjct: 494 tcgacctgtggttcgaccccacggccgacttccacac 530
>gb|BT020422.1| Arabidopsis thaliana At4g14130 mRNA, complete cds Length = 870 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 ggaaactcggccggcaccgt 330 |||||||||||||||||||| Sbjct: 244 ggaaactcggccggcaccgt 263
>ref|NM_117490.2| Arabidopsis thaliana XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds AT4G14130 (XTR7) mRNA, complete cds Length = 1064 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 ggaaactcggccggcaccgt 330 |||||||||||||||||||| Sbjct: 329 ggaaactcggccggcaccgt 348
>gb|DQ078740.2| Dermatophagoides pteronyssinus group 15 allergen protein mRNA, complete cds Length = 1677 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 cgactaccacacctacacca 521 |||||||||||||||||||| Sbjct: 1442 cgactaccacacctacacca 1461 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 cgactaccacacctacacca 521 |||||||||||||||||||| Sbjct: 1364 cgactaccacacctacacca 1383 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 cgactaccacacctacacca 521 |||||||||||||||||||| Sbjct: 1325 cgactaccacacctacacca 1344
>gb|DQ078741.1| Dermatophagoides pteronyssinus group 15 allergen protein short isoform mRNA, complete cds Length = 1599 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 cgactaccacacctacacca 521 |||||||||||||||||||| Sbjct: 1364 cgactaccacacctacacca 1383 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 cgactaccacacctacacca 521 |||||||||||||||||||| Sbjct: 1325 cgactaccacacctacacca 1344
>ref|XM_475409.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1461 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 gtgctcaacaccaacgtctg 444 |||||||||||||||||||| Sbjct: 772 gtgctcaacaccaacgtctg 791
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 578 ttcaagcgcttcgccggcat 597 |||||||||||||||||||| Sbjct: 457841 ttcaagcgcttcgccggcat 457860
>gb|AC112159.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1058_C01, complete sequence Length = 114236 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 gtgctcaacaccaacgtctg 444 |||||||||||||||||||| Sbjct: 65066 gtgctcaacaccaacgtctg 65085
>emb|Z97335.2|ATFCA0 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 0 Length = 200576 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 ggaaactcggccggcaccgt 330 |||||||||||||||||||| Sbjct: 95845 ggaaactcggccggcaccgt 95826
>gb|AY045865.1| Arabidopsis thaliana putative xyloglucan endotransglycosylase-related protein XTR-7 (At4g14130) mRNA, complete cds Length = 1075 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 ggaaactcggccggcaccgt 330 |||||||||||||||||||| Sbjct: 329 ggaaactcggccggcaccgt 348
>gb|AY580314.1| Selaginella kraussiana putative xyloglucan endotransglucosylase/hydrolase (XTH1) mRNA, complete cds Length = 849 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 480 acctctggttcgaccccgccgccgactaccac 511 |||| ||||||||||| |||||||||||||| Sbjct: 398 acctgtggttcgacccgaccgccgactaccac 429
>emb|AL161538.2|ATCHRIV38 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 38 Length = 198944 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 ggaaactcggccggcaccgt 330 |||||||||||||||||||| Sbjct: 35393 ggaaactcggccggcaccgt 35374
>gb|AC108046.3| Homo sapiens BAC clone RP11-308K2 from 4, complete sequence Length = 177483 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 atgaagctcatcccgggaaa 315 |||||||||||||||||||| Sbjct: 46165 atgaagctcatcccgggaaa 46184
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 aacggcgatggcaagaagga 468 |||||||||||||||||||| Sbjct: 879220 aacggcgatggcaagaagga 879201
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 gtgctcaacaccaacgtctg 444 |||||||||||||||||||| Sbjct: 22866362 gtgctcaacaccaacgtctg 22866381
>emb|BX841553.1|CNS09YH5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS9ZA10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 975 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 ggaaactcggccggcaccgt 330 |||||||||||||||||||| Sbjct: 307 ggaaactcggccggcaccgt 326
>gb|AE004918.1| Pseudomonas aeruginosa PAO1, section 479 of 529 of the complete genome Length = 11170 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 578 ttcaagcgcttcgccggcat 597 |||||||||||||||||||| Sbjct: 1063 ttcaagcgcttcgccggcat 1044
>gb|AY087282.1| Arabidopsis thaliana clone 33554 mRNA, complete sequence Length = 1060 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 ggaaactcggccggcaccgt 330 |||||||||||||||||||| Sbjct: 329 ggaaactcggccggcaccgt 348
>gb|AE005034.1| Halobacterium sp. NRC-1 section 65 of 170 of the complete genome Length = 11258 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 gcgctctcgcaggccgcctc 135 |||||||||||||||||||| Sbjct: 2969 gcgctctcgcaggccgcctc 2950
>ref|NM_209041.1| Eremothecium gossypii ACR286Cp (ACR286C), mRNA Length = 3060 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 449 aacggcgatggcaagaagga 468 |||||||||||||||||||| Sbjct: 1177 aacggcgatggcaagaagga 1196
>dbj|AK065288.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002M22, full insert sequence Length = 1957 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 gtgctcaacaccaacgtctg 444 |||||||||||||||||||| Sbjct: 1024 gtgctcaacaccaacgtctg 1043
>dbj|AB083581.1| Oryza sativa (japonica cultivar-group) OsAMT2;1 gene for ammonium transporter, complete cds Length = 5153 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 gtgctcaacaccaacgtctg 444 |||||||||||||||||||| Sbjct: 3347 gtgctcaacaccaacgtctg 3366
>dbj|AB051864.1| Oryza sativa OsAMT2;1 mRNA for ammonium transporter, complete cds Length = 2040 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 gtgctcaacaccaacgtctg 444 |||||||||||||||||||| Sbjct: 1091 gtgctcaacaccaacgtctg 1110
>gb|U43489.1|ATU43489 Arabidopsis thaliana xyloglucan endotransglycosylase-related protein (XTR7) mRNA, complete cds Length = 979 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 ggaaactcggccggcaccgt 330 |||||||||||||||||||| Sbjct: 244 ggaaactcggccggcaccgt 263 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,062,507 Number of Sequences: 3902068 Number of extensions: 4062507 Number of successful extensions: 74724 Number of sequences better than 10.0: 120 Number of HSP's better than 10.0 without gapping: 124 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 73653 Number of HSP's gapped (non-prelim): 1058 length of query: 597 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 574 effective length of database: 17,143,297,704 effective search space: 9840252882096 effective search space used: 9840252882096 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
