ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart56h05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1RS3A_ORYSA (P49397) 40S ribosomal protein S3a (CYC07 protein) 257 2e-68
2RS3A_CATRO (P33444) 40S ribosomal protein S3a (CYC07 protein) 241 1e-63
3RS3A_HELAN (P49198) 40S ribosomal protein S3a 240 2e-63
4RS3A_BRARA (P49396) 40S ribosomal protein S3a (S phase-specific ... 240 2e-63
5RS3A_ARATH (Q42262) 40S ribosomal protein S3a 238 7e-63
6RS3A_FELCA (P61246) 40S ribosomal protein S3a (Fragment) 209 4e-54
7RS3A_RAT (P49242) 40S ribosomal protein S3a (V-fos transformatio... 209 4e-54
8RS3A_MOUSE (P97351) 40S ribosomal protein S3a 209 4e-54
9RS3A_HUMAN (P61247) 40S ribosomal protein S3a 209 4e-54
10RS3A_GECJA (Q6DV02) 40S ribosomal protein S3a 209 4e-54
11RS3A_EIMTE (O43999) 40S ribosomal protein S3a (EtS3a) 209 4e-54
12RS3A_BOVIN (Q56JV9) 40S ribosomal protein S3a 209 4e-54
13RS3A_ORYLA (O73813) 40S ribosomal protein S3a (V-fos transformat... 209 6e-54
14RS3A_XENTR (Q642T2) 40S ribosomal protein S3a 208 7e-54
15RS3A_XENLA (Q801S3) 40S ribosomal protein S3a 208 7e-54
16RS3A_TORRU (Q9XEG7) 40S ribosomal protein S3a 208 9e-54
17RS3A_BRARE (Q6PBY1) 40S ribosomal protein S3a 207 1e-53
18RS3A_MACFA (Q4R4Z6) 40S ribosomal protein S3a 207 2e-53
19RS3A_TETNG (Q4T8S6) 40S ribosomal protein S3a 207 2e-53
20RS3A_OPHHA (Q98TX2) 40S ribosomal protein S3a 207 2e-53
21RS3A_CANAL (P40910) 40S ribosomal protein S3aE (S1) 199 4e-51
22RS3A_YEAST (P33442) 40S ribosomal protein S1-A (RP10A) 194 1e-49
23RS3B_YEAST (P23248) 40S ribosomal protein S1-B (RP10B) 193 2e-49
24RS3A_APLCA (P49395) 40S ribosomal protein S3a (Lysine-rich prote... 193 2e-49
25RS3A_ANOGA (P52813) 40S ribosomal protein S3a (C3 protein) 183 2e-46
26RS3A_SCHPO (Q09781) 40S ribosomal protein S3aE-A (S1-A) 182 4e-46
27RS3B_SCHPO (O94438) 40S ribosomal protein S3aE-B (S1-A) 182 6e-46
28RS3A_CAEEL (P48154) 40S ribosomal protein S3a 182 7e-46
29RS3A_DROME (P55830) 40S ribosomal protein S3a (C3 protein) 180 3e-45
30RS3A_METTH (O27630) 30S ribosomal protein S3Ae 71 2e-12
31RS3A_PYRFU (Q8TZE1) 30S ribosomal protein S3Ae 70 4e-12
32RS3A_METAC (Q8TKI9) 30S ribosomal protein S3Ae 70 5e-12
33RS3A_PYRHO (O57803) 30S ribosomal protein S3Ae 70 5e-12
34RS3A_ARCFU (O27964) 30S ribosomal protein S3Ae 68 2e-11
35RS3A_PYRAB (Q9V2K7) 30S ribosomal protein S3Ae 67 3e-11
36RS3A_PYRAE (Q8ZT21) 30S ribosomal protein S3Ae 67 4e-11
37RS3A_PYRKO (Q5JGM4) 30S ribosomal protein S3Ae 66 8e-11
38RS3A_METMA (Q8Q0F2) 30S ribosomal protein S3Ae 66 8e-11
39RS3A_METKA (Q8TVD1) 30S ribosomal protein S3Ae 65 1e-10
40RS3A_SULTO (Q975F8) 30S ribosomal protein S3Ae 64 4e-10
41RS3A_HALMA (Q5V296) 30S ribosomal protein S3Ae 62 1e-09
42RS3A_METMP (Q6LZG0) 30S ribosomal protein S3Ae 61 2e-09
43RS3A_SULAC (Q4JB17) 30S ribosomal protein S3Ae 60 3e-09
44RS3A_SULSO (Q9UXD4) 30S ribosomal protein S3Ae 57 3e-08
45RS3A_AERPE (Q9YCV8) 30S ribosomal protein S3Ae 57 3e-08
46RS3A_HALSA (Q9HRA5) 30S ribosomal protein S3Ae 57 4e-08
47RS3A_THEVO (Q978Z2) 30S ribosomal protein S3Ae 51 3e-06
48RS3A_THEAC (Q9HJ08) 30S ribosomal protein S3Ae 46 6e-05
49RS3A_PICTO (Q6KYU3) 30S ribosomal protein S3Ae 46 6e-05
50NCAP_INBP9 (O36433) Nucleoprotein 34 0.24
51RS3A_NANEQ (Q74N14) 30S ribosomal protein S3Ae 34 0.32
52NCAP_INBSI (P04666) Nucleoprotein 33 0.54
53NCAP_INBAA (P11102) Nucleoprotein 33 0.54
54CJ006_HUMAN (Q8IX21) Protein C10orf6 32 1.2
55CJ006_PONPY (Q5REF4) Protein C10orf6 homolog 32 1.2
56CJ006_MOUSE (Q6P9P0) Protein C10orf6 homolog 31 2.1
57DNAK_NITEU (O06430) Chaperone protein dnaK (Heat shock protein 7... 31 2.1
58ARMX6_MOUSE (Q8K3A6) Protein ARMCX6 31 2.1
59AKR_CHICK (Q90655) Homeobox protein AKR (Avian knotted-related p... 31 2.1
60RFBC_MYXXA (Q50864) O-antigen biosynthesis protein rfbC 31 2.1
61MET_PANTR (Q2QLF1) Hepatocyte growth factor receptor precursor (... 31 2.7
62MET_HUMAN (P08581) Hepatocyte growth factor receptor precursor (... 31 2.7
63NCAP_INBAC (P13884) Nucleoprotein 31 2.7
64MET_CALJA (Q2QLG5) Hepatocyte growth factor receptor precursor (... 31 2.7
65RNPS1_XENLA (Q5XG24) RNA-binding protein with serine-rich domain 1 31 2.7
66FOLD_HELPY (P56467) FolD bifunctional protein [Includes: Methyle... 30 3.5
67FOLD_HELPJ (Q9ZLQ4) FolD bifunctional protein [Includes: Methyle... 30 3.5
68TENX_HUMAN (P22105) Tenascin-X precursor (TN-X) (Hexabrachion-li... 30 3.5
69ZN619_HUMAN (Q8N2I2) Zinc finger protein 619 30 4.6
70NCAP_INBAD (P13885) Nucleoprotein 30 4.6
71BLVR_BOVIN (Q03368) Bovine leukemia virus cell receptor precurso... 30 4.6
72RNPS1_RAT (Q6AYK1) RNA-binding protein with serine-rich domain 1 30 6.0
73RNPS1_PONPY (Q5NVM8) RNA-binding protein with serine-rich domain 1 30 6.0
74RNPS1_MOUSE (Q99M28) RNA-binding protein with serine-rich domain 1 30 6.0
75RNPS1_MACFA (Q4R5N1) RNA-binding protein with serine-rich domain 1 30 6.0
76RNPS1_HUMAN (Q15287) RNA-binding protein with serine-rich domain... 30 6.0
77MET_OTOGA (Q2QLH6) Hepatocyte growth factor receptor precursor (... 30 6.0
78SYI_COREF (Q8FNV0) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isole... 30 6.0
79BMP2_HUMAN (P12643) Bone morphogenetic protein 2 precursor (BMP-... 30 6.0
80TTUC_PSEPU (Q51945) Tartrate dehydrogenase/decarboxylase (EC 1.1... 30 6.0
81MET_MOUSE (P16056) Hepatocyte growth factor receptor precursor (... 30 6.0
82MET_PIG (Q2QLE0) Hepatocyte growth factor receptor precursor (EC... 29 7.9
83RPP1_YEAST (P38786) Ribonuclease P protein subunit RPP1 (EC 3.1.... 29 7.9
84MET_RAT (P97523) Hepatocyte growth factor receptor precursor (EC... 29 7.9
85OSBL3_HUMAN (Q9H4L5) Oxysterol-binding protein-related protein 3... 29 7.9
86ALU6_HUMAN (P39193) Alu subfamily SP sequence contamination warn... 29 7.9 
>RS3A_ORYSA (P49397) 40S ribosomal protein S3a (CYC07 protein)|
          Length = 261

 Score =  257 bits (656), Expect = 2e-68
 Identities = 124/133 (93%), Positives = 128/133 (96%)
 Frame = +3

Query: 156 TVDPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQ 335
           TVDPF KKDWYDIKAP++FN RNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQ DEDQ
Sbjct: 19  TVDPFAKKDWYDIKAPSVFNVRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQ 78

Query: 336 AFRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFC 515
           A+RKIRLRAEDVQGKNVLTNFWGM FTTDKLRSLV+KWQTLIEAHVDVKTTD YMLRLFC
Sbjct: 79  AYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTTDGYMLRLFC 138

Query: 516 IGFTKRRPNQVKR 554
           IGFTKRRPNQVKR
Sbjct: 139 IGFTKRRPNQVKR 151
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>RS3A_CATRO (P33444) 40S ribosomal protein S3a (CYC07 protein)|
          Length = 259

 Score =  241 bits (614), Expect = 1e-63
 Identities = 112/131 (85%), Positives = 125/131 (95%)
 Frame = +3

Query: 162 DPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQAF 341
           DPF KKDWYDIKAP++F+ RN+GKTLV+RTQGTKIASEGL+HRVFE+SLADLQGDED +F
Sbjct: 21  DPFAKKDWYDIKAPSVFSVRNVGKTLVTRTQGTKIASEGLEHRVFEISLADLQGDEDHSF 80

Query: 342 RKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFCIG 521
           RKIRLRAED+QGKNVLTNFWGMDFTTDKLRSLVRKWQ+LIEAHVDVKTTD+Y LR+FCIG
Sbjct: 81  RKIRLRAEDIQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIEAHVDVKTTDSYTLRMFCIG 140

Query: 522 FTKRRPNQVKR 554
           FTK+R NQ KR
Sbjct: 141 FTKKRANQQKR 151
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>RS3A_HELAN (P49198) 40S ribosomal protein S3a|
          Length = 259

 Score =  240 bits (613), Expect = 2e-63
 Identities = 114/131 (87%), Positives = 125/131 (95%)
 Frame = +3

Query: 162 DPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQAF 341
           DPF+KKDWYDIKAP+LF TRN+GKTLV+RTQGTKIASEGLKHRVFEVSLADLQ DED ++
Sbjct: 21  DPFSKKDWYDIKAPSLFITRNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEDHSY 80

Query: 342 RKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFCIG 521
           RKIRLRAEDVQGKNVLTNFWGMD TTDKLRSLV+KWQ+LIEAHVDVKTTDN+ LR+FCIG
Sbjct: 81  RKIRLRAEDVQGKNVLTNFWGMDVTTDKLRSLVKKWQSLIEAHVDVKTTDNFTLRMFCIG 140

Query: 522 FTKRRPNQVKR 554
           FTK+R NQVKR
Sbjct: 141 FTKKRANQVKR 151
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>RS3A_BRARA (P49396) 40S ribosomal protein S3a (S phase-specific protein|
           BIS289)
          Length = 261

 Score =  240 bits (612), Expect = 2e-63
 Identities = 116/132 (87%), Positives = 122/132 (92%)
 Frame = +3

Query: 159 VDPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQA 338
           VDPF KKDWYDIKAP+ F  RN+GKTLVSRTQGTKIASEGLKHRVFEVSLADL  DEDQA
Sbjct: 20  VDPFAKKDWYDIKAPSSFTHRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLNKDEDQA 79

Query: 339 FRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFCI 518
           +RKIRLRAEDVQG+NVLT FWGMDFTTDKLRSLV+KWQTLIE+HVDVKTTDNY LRLFCI
Sbjct: 80  YRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTLIESHVDVKTTDNYTLRLFCI 139

Query: 519 GFTKRRPNQVKR 554
            FTKRR NQVKR
Sbjct: 140 AFTKRRANQVKR 151
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>RS3A_ARATH (Q42262) 40S ribosomal protein S3a|
          Length = 261

 Score =  238 bits (608), Expect = 7e-63
 Identities = 114/132 (86%), Positives = 121/132 (91%)
 Frame = +3

Query: 159 VDPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQA 338
           VDPF+KKDWYD+KAP  F  RN+GKTLVSRTQGTKIASEGLKHRVFEVSLADLQ DED A
Sbjct: 20  VDPFSKKDWYDVKAPGSFTNRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDNA 79

Query: 339 FRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFCI 518
           +RKIRLRAEDVQG+NVLT FWGMDFTTDKLRSLV+KWQTLIEAHVDVKTTD Y LR+FCI
Sbjct: 80  YRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTLIEAHVDVKTTDGYTLRMFCI 139

Query: 519 GFTKRRPNQVKR 554
            FTKRR NQVKR
Sbjct: 140 AFTKRRANQVKR 151
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>RS3A_FELCA (P61246) 40S ribosomal protein S3a (Fragment)|
          Length = 260

 Score =  209 bits (532), Expect = 4e-54
 Identities = 100/132 (75%), Positives = 116/132 (87%)
 Frame = +3

Query: 159 VDPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQA 338
           VDPF+KKDWYD+KAP +FN RNIGKTLV+RTQGTKIAS+GLK RVFEVSLADLQ DE  A
Sbjct: 18  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 76

Query: 339 FRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFCI 518
           FRK +L  EDVQGKN LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LRLFC+
Sbjct: 77  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 136

Query: 519 GFTKRRPNQVKR 554
           GFTK+R NQ+++
Sbjct: 137 GFTKKRNNQIRK 148
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>RS3A_RAT (P49242) 40S ribosomal protein S3a (V-fos transformation effector|
           protein) [Contains: 40S ribosomal protein S3b]
          Length = 263

 Score =  209 bits (532), Expect = 4e-54
 Identities = 100/132 (75%), Positives = 116/132 (87%)
 Frame = +3

Query: 159 VDPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQA 338
           VDPF+KKDWYD+KAP +FN RNIGKTLV+RTQGTKIAS+GLK RVFEVSLADLQ DE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 339 FRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFCI 518
           FRK +L  EDVQGKN LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LRLFC+
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139

Query: 519 GFTKRRPNQVKR 554
           GFTK+R NQ+++
Sbjct: 140 GFTKKRNNQIRK 151
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>RS3A_MOUSE (P97351) 40S ribosomal protein S3a|
          Length = 263

 Score =  209 bits (532), Expect = 4e-54
 Identities = 100/132 (75%), Positives = 116/132 (87%)
 Frame = +3

Query: 159 VDPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQA 338
           VDPF+KKDWYD+KAP +FN RNIGKTLV+RTQGTKIAS+GLK RVFEVSLADLQ DE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 339 FRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFCI 518
           FRK +L  EDVQGKN LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LRLFC+
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139

Query: 519 GFTKRRPNQVKR 554
           GFTK+R NQ+++
Sbjct: 140 GFTKKRNNQIRK 151
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>RS3A_HUMAN (P61247) 40S ribosomal protein S3a|
          Length = 263

 Score =  209 bits (532), Expect = 4e-54
 Identities = 100/132 (75%), Positives = 116/132 (87%)
 Frame = +3

Query: 159 VDPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQA 338
           VDPF+KKDWYD+KAP +FN RNIGKTLV+RTQGTKIAS+GLK RVFEVSLADLQ DE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 339 FRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFCI 518
           FRK +L  EDVQGKN LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LRLFC+
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139

Query: 519 GFTKRRPNQVKR 554
           GFTK+R NQ+++
Sbjct: 140 GFTKKRNNQIRK 151
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>RS3A_GECJA (Q6DV02) 40S ribosomal protein S3a|
          Length = 263

 Score =  209 bits (532), Expect = 4e-54
 Identities = 100/132 (75%), Positives = 116/132 (87%)
 Frame = +3

Query: 159 VDPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQA 338
           VDPF+KKDWYD+KAP +FN RNIGKTLV+RTQGTKIAS+GLK RVFEVSLADLQ DE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 339 FRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFCI 518
           FRK +L  EDVQGKN LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LRLFC+
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139

Query: 519 GFTKRRPNQVKR 554
           GFTK+R NQ+++
Sbjct: 140 GFTKKRNNQIRK 151
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>RS3A_EIMTE (O43999) 40S ribosomal protein S3a (EtS3a)|
          Length = 263

 Score =  209 bits (532), Expect = 4e-54
 Identities = 100/132 (75%), Positives = 116/132 (87%)
 Frame = +3

Query: 159 VDPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQA 338
           VDPF+KKDWYD+KAP +FN RNIGKTLV+RTQGTKIAS+GLK RVFEVSLADLQ DE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 339 FRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFCI 518
           FRK +L  EDVQGKN LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LRLFC+
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMFSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139

Query: 519 GFTKRRPNQVKR 554
           GFTK+R NQ+++
Sbjct: 140 GFTKKRNNQIRK 151
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>RS3A_BOVIN (Q56JV9) 40S ribosomal protein S3a|
          Length = 263

 Score =  209 bits (532), Expect = 4e-54
 Identities = 100/132 (75%), Positives = 116/132 (87%)
 Frame = +3

Query: 159 VDPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQA 338
           VDPF+KKDWYD+KAP +FN RNIGKTLV+RTQGTKIAS+GLK RVFEVSLADLQ DE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 339 FRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFCI 518
           FRK +L  EDVQGKN LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LRLFC+
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139

Query: 519 GFTKRRPNQVKR 554
           GFTK+R NQ+++
Sbjct: 140 GFTKKRNNQIRK 151
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>RS3A_ORYLA (O73813) 40S ribosomal protein S3a (V-fos transformation effector|
           protein)
          Length = 265

 Score =  209 bits (531), Expect = 6e-54
 Identities = 100/132 (75%), Positives = 116/132 (87%)
 Frame = +3

Query: 159 VDPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQA 338
           VDPF+KKDWYD+KAP +FN RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQ DE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 339 FRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFCI 518
           FRK +L  EDVQGKN LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LRLFC+
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139

Query: 519 GFTKRRPNQVKR 554
           GFTK+R NQV++
Sbjct: 140 GFTKKRNNQVRK 151
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>RS3A_XENTR (Q642T2) 40S ribosomal protein S3a|
          Length = 263

 Score =  208 bits (530), Expect = 7e-54
 Identities = 99/132 (75%), Positives = 116/132 (87%)
 Frame = +3

Query: 159 VDPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQA 338
           VDPF+KKDWYD+KAP +FN RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQ DE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 339 FRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFCI 518
           FRK +L  EDVQGKN LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LRLFC+
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139

Query: 519 GFTKRRPNQVKR 554
           GFTK+R NQ+++
Sbjct: 140 GFTKKRNNQIRK 151
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>RS3A_XENLA (Q801S3) 40S ribosomal protein S3a|
          Length = 263

 Score =  208 bits (530), Expect = 7e-54
 Identities = 99/132 (75%), Positives = 116/132 (87%)
 Frame = +3

Query: 159 VDPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQA 338
           VDPF+KKDWYD+KAP +FN RN+GKTLV+RTQGTKIAS+GLK RVFEVSLADLQ DE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 339 FRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFCI 518
           FRK +L  EDVQGKN LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LRLFC+
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139

Query: 519 GFTKRRPNQVKR 554
           GFTK+R NQ+++
Sbjct: 140 GFTKKRNNQIRK 151
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>RS3A_TORRU (Q9XEG7) 40S ribosomal protein S3a|
          Length = 247

 Score =  208 bits (529), Expect = 9e-54
 Identities = 101/131 (77%), Positives = 111/131 (84%)
 Frame = +3

Query: 159 VDPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQA 338
           VDPF+KKDWYDIKAP        G+    RT GTKIAS+GL  RVFEVSLADLQ DEDQA
Sbjct: 20  VDPFSKKDWYDIKAPPRSRRARSGRRC-HRTAGTKIASDGLNFRVFEVSLADLQNDEDQA 78

Query: 339 FRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFCI 518
           FRKI+LRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQ+LI+AHVDVKTTDNY +R+FCI
Sbjct: 79  FRKIKLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIQAHVDVKTTDNYQIRIFCI 138

Query: 519 GFTKRRPNQVK 551
            FTK+RPN  +
Sbjct: 139 AFTKKRPNHTR 149
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>RS3A_BRARE (Q6PBY1) 40S ribosomal protein S3a|
          Length = 266

 Score =  207 bits (528), Expect = 1e-53
 Identities = 98/132 (74%), Positives = 116/132 (87%)
 Frame = +3

Query: 159 VDPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQA 338
           VDPF+KKDWYD+KAP +FN RN+GKTLV+RTQGT+IAS+GLK RVFEVSLADLQ DE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTRIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 339 FRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFCI 518
           FRK +L  EDVQGKN LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LRLFC+
Sbjct: 80  FRKFKLVTEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139

Query: 519 GFTKRRPNQVKR 554
           GFTK+R NQ+++
Sbjct: 140 GFTKKRTNQIRK 151
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>RS3A_MACFA (Q4R4Z6) 40S ribosomal protein S3a|
          Length = 263

 Score =  207 bits (527), Expect = 2e-53
 Identities = 99/132 (75%), Positives = 115/132 (87%)
 Frame = +3

Query: 159 VDPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQA 338
           VDPF+KKDWYD+KAP +FN RNIGKTLV+RTQGTKIAS+GLK  VFEVSLADLQ DE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGHVFEVSLADLQNDE-VA 79

Query: 339 FRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFCI 518
           FRK +L  EDVQGKN LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LRLFC+
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139

Query: 519 GFTKRRPNQVKR 554
           GFTK+R NQ+++
Sbjct: 140 GFTKKRNNQIRK 151
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>RS3A_TETNG (Q4T8S6) 40S ribosomal protein S3a|
          Length = 265

 Score =  207 bits (527), Expect = 2e-53
 Identities = 98/132 (74%), Positives = 116/132 (87%)
 Frame = +3

Query: 159 VDPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQA 338
           VDPF+KKDWYD+KAP +FN RN+GKTLV+RTQGT+IAS+GLK RV+EVSLADLQ DE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNLGKTLVTRTQGTRIASDGLKGRVYEVSLADLQNDE-VA 79

Query: 339 FRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFCI 518
           FRK +L  EDVQGKN LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LRLFC+
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139

Query: 519 GFTKRRPNQVKR 554
           GFTKRR NQ+++
Sbjct: 140 GFTKRRNNQIRK 151
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>RS3A_OPHHA (Q98TX2) 40S ribosomal protein S3a|
          Length = 263

 Score =  207 bits (526), Expect = 2e-53
 Identities = 98/132 (74%), Positives = 115/132 (87%)
 Frame = +3

Query: 159 VDPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQA 338
           VDPF+KKDWYD+KAP +FN RNIGKTLV+RTQGTKIAS+GLK RVFEVSLADLQ DE  A
Sbjct: 21  VDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDE-VA 79

Query: 339 FRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFCI 518
           FRK +L  EDVQGKN L NF GMD T DK+ S+V+KWQT+IEAH+DVKTTD Y+LRLFC+
Sbjct: 80  FRKFKLITEDVQGKNCLINFHGMDLTRDKMCSMVKKWQTMIEAHIDVKTTDGYLLRLFCV 139

Query: 519 GFTKRRPNQVKR 554
           GFTK+R NQ+++
Sbjct: 140 GFTKKRTNQIRK 151
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>RS3A_CANAL (P40910) 40S ribosomal protein S3aE (S1)|
          Length = 255

 Score =  199 bits (506), Expect = 4e-51
 Identities = 91/131 (69%), Positives = 116/131 (88%)
 Frame = +3

Query: 159 VDPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQA 338
           VDPFT+KDW+DIKAPT F  RN+GKTL++R+ G K A++GLK RVFEV LADLQG ED +
Sbjct: 20  VDPFTRKDWFDIKAPTTFENRNVGKTLINRSTGLKNAADGLKGRVFEVCLADLQGSEDHS 79

Query: 339 FRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFCI 518
           +RKI+LR ++VQGKN+LTNF G+DFT+DKLRSLVRKWQ+L+EA+V VKT+D+Y+LR+F I
Sbjct: 80  YRKIKLRVDEVQGKNLLTNFHGLDFTSDKLRSLVRKWQSLVEANVTVKTSDDYVLRVFAI 139

Query: 519 GFTKRRPNQVK 551
            FTKR+PNQ+K
Sbjct: 140 AFTKRQPNQIK 150
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>RS3A_YEAST (P33442) 40S ribosomal protein S1-A (RP10A)|
          Length = 254

 Score =  194 bits (493), Expect = 1e-49
 Identities = 91/132 (68%), Positives = 114/132 (86%)
 Frame = +3

Query: 159 VDPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQA 338
           VDPFT+K+W+DIKAP+ F  RN+GKTLV+++ G K AS+ LK RV EV LADLQG ED +
Sbjct: 20  VDPFTRKEWFDIKAPSTFENRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHS 79

Query: 339 FRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFCI 518
           FRKI+LR ++VQGKN+LTNF GMDFTTDKLRS+VRKWQTLIEA+V VKT+D+Y+LR+F I
Sbjct: 80  FRKIKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAI 139

Query: 519 GFTKRRPNQVKR 554
            FT+++ NQVKR
Sbjct: 140 AFTRKQANQVKR 151
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>RS3B_YEAST (P23248) 40S ribosomal protein S1-B (RP10B)|
          Length = 254

 Score =  193 bits (491), Expect = 2e-49
 Identities = 90/132 (68%), Positives = 114/132 (86%)
 Frame = +3

Query: 159 VDPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQA 338
           VDPFT+K+W+DIKAP+ F  RN+GKTLV+++ G K AS+ LK RV EV LADLQG ED +
Sbjct: 20  VDPFTRKEWFDIKAPSTFENRNVGKTLVNKSTGLKNASDALKGRVVEVCLADLQGSEDHS 79

Query: 339 FRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFCI 518
           FRK++LR ++VQGKN+LTNF GMDFTTDKLRS+VRKWQTLIEA+V VKT+D+Y+LR+F I
Sbjct: 80  FRKVKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAI 139

Query: 519 GFTKRRPNQVKR 554
            FT+++ NQVKR
Sbjct: 140 AFTRKQANQVKR 151
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>RS3A_APLCA (P49395) 40S ribosomal protein S3a (Lysine-rich protein KRP-A)|
          Length = 264

 Score =  193 bits (491), Expect = 2e-49
 Identities = 96/132 (72%), Positives = 113/132 (85%)
 Frame = +3

Query: 159 VDPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQA 338
           VDPFTKK+WYD+KAP++F  R IGKTLV+R+QGTKIAS+ LK RVFEVSLADLQ DE   
Sbjct: 21  VDPFTKKEWYDVKAPSMFAVRQIGKTLVTRSQGTKIASDNLKGRVFEVSLADLQNDE-VT 79

Query: 339 FRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFCI 518
           FRK +L AE+VQG+NVLTNF GM  T DKL S+V+KWQTLIEA+VDVKTTD Y+LR+F I
Sbjct: 80  FRKFKLIAEEVQGRNVLTNFSGMSLTRDKLCSMVKKWQTLIEANVDVKTTDGYLLRVFAI 139

Query: 519 GFTKRRPNQVKR 554
           GFTK+R NQVK+
Sbjct: 140 GFTKKRNNQVKK 151
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>RS3A_ANOGA (P52813) 40S ribosomal protein S3a (C3 protein)|
          Length = 268

 Score =  183 bits (465), Expect = 2e-46
 Identities = 90/125 (72%), Positives = 104/125 (83%), Gaps = 2/125 (1%)
 Frame = +3

Query: 159 VDPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDED-- 332
           VDPFT+KDWYD+KAP +F  R  GKTLV+RTQGTKIAS+GLK RVFEVSLADLQ + D  
Sbjct: 21  VDPFTRKDWYDVKAPNMFKNRQSGKTLVNRTQGTKIASDGLKGRVFEVSLADLQNEPDAE 80

Query: 333 QAFRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLF 512
           ++FRK +L AE V G++VLTNF GM  TTDKLRS+V KWQTLIE  VDVKTTD +MLR+F
Sbjct: 81  RSFRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVNKWQTLIECSVDVKTTDGFMLRVF 140

Query: 513 CIGFT 527
           CIGFT
Sbjct: 141 CIGFT 145
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>RS3A_SCHPO (Q09781) 40S ribosomal protein S3aE-A (S1-A)|
          Length = 251

 Score =  182 bits (463), Expect = 4e-46
 Identities = 85/132 (64%), Positives = 107/132 (81%)
 Frame = +3

Query: 159 VDPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQA 338
           VDPF++KDWYDIKAP  F  +N+GKTLV+RT G K A++ LK R+ EVSLADLQ DE+ +
Sbjct: 20  VDPFSRKDWYDIKAPAFFEVKNVGKTLVNRTAGLKNANDSLKGRILEVSLADLQKDEEHS 79

Query: 339 FRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFCI 518
           FRK++LR ED+QGK+ LT+F G D T+DKLRSLVRKWQ+ IEA+  +KTTD Y+ R+F I
Sbjct: 80  FRKVKLRVEDIQGKSCLTSFNGFDMTSDKLRSLVRKWQSTIEANQTIKTTDGYLCRIFVI 139

Query: 519 GFTKRRPNQVKR 554
           GFT RR NQVK+
Sbjct: 140 GFTSRRVNQVKK 151
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>RS3B_SCHPO (O94438) 40S ribosomal protein S3aE-B (S1-A)|
          Length = 251

 Score =  182 bits (462), Expect = 6e-46
 Identities = 85/132 (64%), Positives = 107/132 (81%)
 Frame = +3

Query: 159 VDPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQA 338
           VDPF++K+WYDIKAP  F  +N+GKTLV+RT G K A++ LK R+ EVSLADLQ DE+ A
Sbjct: 20  VDPFSRKEWYDIKAPAFFEVKNVGKTLVNRTAGLKNANDSLKGRILEVSLADLQKDEEHA 79

Query: 339 FRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFCI 518
           FRK++LR ED+QGK+ LT+F G+  T+DKLRSLVRKWQT IEA   +KTTD Y+ R+F I
Sbjct: 80  FRKVKLRVEDIQGKSCLTSFNGLSITSDKLRSLVRKWQTTIEADQTIKTTDGYLCRVFVI 139

Query: 519 GFTKRRPNQVKR 554
           GFT+RR NQVK+
Sbjct: 140 GFTRRRANQVKK 151
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>RS3A_CAEEL (P48154) 40S ribosomal protein S3a|
          Length = 256

 Score =  182 bits (461), Expect = 7e-46
 Identities = 91/132 (68%), Positives = 105/132 (79%)
 Frame = +3

Query: 159 VDPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQA 338
           VDPF++K+WYDIKAP +FNTR +GKTL++RTQGTKIASEGLK RVFEVSL DL   E   
Sbjct: 19  VDPFSRKEWYDIKAPNMFNTRQVGKTLINRTQGTKIASEGLKGRVFEVSLGDLNNSEAD- 77

Query: 339 FRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFCI 518
           FRK +L AEDVQGKNVLTNF  M  T DKL S+V+KW TLIEA+  VKTTD Y LR+F I
Sbjct: 78  FRKFKLIAEDVQGKNVLTNFHAMSMTHDKLCSIVKKWHTLIEANTAVKTTDGYTLRVFVI 137

Query: 519 GFTKRRPNQVKR 554
            FTK+  NQVK+
Sbjct: 138 AFTKKSVNQVKK 149
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>RS3A_DROME (P55830) 40S ribosomal protein S3a (C3 protein)|
          Length = 267

 Score =  180 bits (456), Expect = 3e-45
 Identities = 89/127 (70%), Positives = 105/127 (82%), Gaps = 2/127 (1%)
 Frame = +3

Query: 159 VDPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDED-- 332
           VDPF++KDWYD+KAP +F TR IGKTLV+RTQG +IAS+ LK RVFEVSLADLQ D D  
Sbjct: 21  VDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPE 80

Query: 333 QAFRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLF 512
           ++FRK RL AEDVQ +NVL NF GMD TTDK RS+V+KWQTLIEA V+ KT D Y+LR+F
Sbjct: 81  RSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVF 140

Query: 513 CIGFTKR 533
           CIGFT +
Sbjct: 141 CIGFTAK 147
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>RS3A_METTH (O27630) 30S ribosomal protein S3Ae|
          Length = 195

 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 42/125 (33%), Positives = 67/125 (53%)
 Frame = +3

Query: 162 DPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQAF 341
           D + +K WY IK+P LF    IG T       ++     LK RV E ++ +L GD  + +
Sbjct: 11  DTWKEKKWYVIKSPKLFGENEIGTT------PSRDPDFLLKRRV-EATMRELTGDFSKQY 63

Query: 342 RKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFCIG 521
            K++ + + V G    T F G   TTD +RS++R+  + ++A V V+T D Y L++  + 
Sbjct: 64  VKLKFQIDSVAGSEATTRFIGHQVTTDYVRSMIRRGTSRVDAPVIVETKDGYKLKVHPLA 123

Query: 522 FTKRR 536
            T RR
Sbjct: 124 ITIRR 128
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>RS3A_PYRFU (Q8TZE1) 30S ribosomal protein S3Ae|
          Length = 198

 Score = 70.1 bits (170), Expect = 4e-12
 Identities = 43/127 (33%), Positives = 62/127 (48%)
 Frame = +3

Query: 156 TVDPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQ 335
           T D +  K WY I AP  F    +G T            E + +RV EV+L D+ GD  +
Sbjct: 9   TRDKWKLKQWYIIYAPDFFGGVEVGLTPADDP-------EKVLNRVVEVTLKDVTGDFTK 61

Query: 336 AFRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFC 515
           +  K+  +  DV+G+N  T F GM      +RSLVR+  T I+   ++ T D Y LR+  
Sbjct: 62  SHVKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRKTTRIDGIFNITTKDGYKLRVMA 121

Query: 516 IGFTKRR 536
           +    RR
Sbjct: 122 MAIAMRR 128
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>RS3A_METAC (Q8TKI9) 30S ribosomal protein S3Ae|
          Length = 203

 Score = 69.7 bits (169), Expect = 5e-12
 Identities = 41/126 (32%), Positives = 67/126 (53%)
 Frame = +3

Query: 159 VDPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQA 338
           +D +  K+WY+I+AP   N   +G T+             L  R  E ++ +L  D  + 
Sbjct: 10  LDGWKSKEWYNIEAPVYLNRAIVGNTMAGDPSL-------LVGRNVETTVGELTNDMTKN 62

Query: 339 FRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFCI 518
             K+ LR  +V G    T+  G + TTD +RS+V++  + I+A+VDVKT D Y++R+   
Sbjct: 63  NTKVILRINNVVGDIATTDLMGHELTTDYIRSIVKRQTSRIDANVDVKTKDGYVIRVKPT 122

Query: 519 GFTKRR 536
            FT +R
Sbjct: 123 CFTIKR 128
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>RS3A_PYRHO (O57803) 30S ribosomal protein S3Ae|
          Length = 199

 Score = 69.7 bits (169), Expect = 5e-12
 Identities = 42/125 (33%), Positives = 60/125 (48%)
 Frame = +3

Query: 162 DPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQAF 341
           D +  K WY I AP  F    +G T            E + +RV EV+L D+ GD  +  
Sbjct: 13  DKWKLKQWYIIYAPDFFGGVEVGLTPADDP-------EKVMNRVVEVTLKDITGDFTKGH 65

Query: 342 RKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFCIG 521
            K+  +  DV+G+N  T F GM      +RSLVR+  T I+   ++ T D Y LR+  + 
Sbjct: 66  VKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRRTTRIDGIFNITTKDGYRLRVMAMA 125

Query: 522 FTKRR 536
              RR
Sbjct: 126 IAMRR 130
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>RS3A_ARCFU (O27964) 30S ribosomal protein S3Ae|
          Length = 211

 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 42/127 (33%), Positives = 61/127 (48%), Gaps = 2/127 (1%)
 Frame = +3

Query: 162 DPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGD--EDQ 335
           D +T K W+ + AP  F    +G+T       +K+       R  E +LA+L  D     
Sbjct: 12  DKWTLKKWFTLIAPEYFGMAELGETPAD--DASKVVG-----RTVETTLAELTNDYSNQN 64

Query: 336 AFRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFC 515
            ++K+  +   V G N  T FW  + T + L SL R+  + IE  VDV T D Y LR+  
Sbjct: 65  TYKKLIFKVYRVAGDNAYTKFWRFELTREYLNSLTRRRTSKIEDIVDVTTADGYKLRVKS 124

Query: 516 IGFTKRR 536
           + FT RR
Sbjct: 125 VVFTVRR 131
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>RS3A_PYRAB (Q9V2K7) 30S ribosomal protein S3Ae|
          Length = 199

 Score = 67.0 bits (162), Expect = 3e-11
 Identities = 42/125 (33%), Positives = 60/125 (48%)
 Frame = +3

Query: 162 DPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQAF 341
           D +  K WY I AP  F    +G T            E + +RV EV+L D+ GD  +  
Sbjct: 12  DKWKLKQWYVIYAPDFFGGVEVGLTPADDP-------EKVLNRVVEVTLKDITGDFLKGH 64

Query: 342 RKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFCIG 521
            K+  +  DV+G+N  T F GM      +RSLVR+  T I+   ++ T D Y LR+  + 
Sbjct: 65  VKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRRTTRIDGIFNITTKDGYKLRVMAMV 124

Query: 522 FTKRR 536
              RR
Sbjct: 125 IAARR 129
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>RS3A_PYRAE (Q8ZT21) 30S ribosomal protein S3Ae|
          Length = 221

 Score = 66.6 bits (161), Expect = 4e-11
 Identities = 39/125 (31%), Positives = 64/125 (51%)
 Frame = +3

Query: 162 DPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQAF 341
           DP+  K W+ + AP+      +G   ++     +  ++ L  R  EVSL D+  D     
Sbjct: 20  DPWALKKWFSVYAPSY-----LGGVFLAEVPANE--AQKLLMRTLEVSLYDITKDISHLP 72

Query: 342 RKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFCIG 521
            K++ +   V+G   LT F G++ T D +RSLVRK  + + A  +VKT D  ++R+  +G
Sbjct: 73  IKLKFQIHRVEGLKALTRFKGLELTRDYIRSLVRKGTSKVTAITEVKTKDGMVMRIAVLG 132

Query: 522 FTKRR 536
            T  R
Sbjct: 133 ITTHR 137
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>RS3A_PYRKO (Q5JGM4) 30S ribosomal protein S3Ae|
          Length = 200

 Score = 65.9 bits (159), Expect = 8e-11
 Identities = 40/125 (32%), Positives = 60/125 (48%)
 Frame = +3

Query: 162 DPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQAF 341
           D +  K+WY + AP  F ++ IG T            E +  RV E +L DL GD  +  
Sbjct: 15  DKWKMKEWYIVYAPDFFGSKEIGLTPADDP-------EKVIGRVIETTLKDLTGDFTKGH 67

Query: 342 RKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFCIG 521
            K+  +  DV+G+N  T F G       +RSLVR+  T ++   ++ T D Y LR+  + 
Sbjct: 68  VKLYFQVYDVKGQNAYTKFKGHTLARSYIRSLVRRRTTRVDGIFNITTKDGYKLRVMGMV 127

Query: 522 FTKRR 536
              RR
Sbjct: 128 IAYRR 132
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>RS3A_METMA (Q8Q0F2) 30S ribosomal protein S3Ae|
          Length = 204

 Score = 65.9 bits (159), Expect = 8e-11
 Identities = 39/126 (30%), Positives = 67/126 (53%)
 Frame = +3

Query: 159 VDPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQA 338
           +D +  K+WY+I+AP   N   +G T+             L  R  E ++ +L  D  + 
Sbjct: 10  LDGWKSKEWYNIEAPAYLNRVIVGTTMAGDPSL-------LVGRNVETTVGELTNDMTKN 62

Query: 339 FRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFCI 518
             K+ LR  +V G    T+  G + TTD +RS+V++  + I+A+VDV+T D +++R+   
Sbjct: 63  NTKVILRVNNVVGDIATTDLMGHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIRVKPT 122

Query: 519 GFTKRR 536
            FT +R
Sbjct: 123 CFTIKR 128
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>RS3A_METKA (Q8TVD1) 30S ribosomal protein S3Ae|
          Length = 211

 Score = 65.1 bits (157), Expect = 1e-10
 Identities = 41/125 (32%), Positives = 61/125 (48%)
 Frame = +3

Query: 162 DPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQAF 341
           D +  K WY I AP +F+   +G+T            E +  RV E +L D+  D  +  
Sbjct: 4   DKWKDKVWYTILAPDMFDNVEVGETPADDP-------EKVIGRVLETTLGDVLDDITKHH 56

Query: 342 RKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFCIG 521
            K+  R  DV+G    + F G     D +RSLVR+  + I+  +DV T D Y +R+  + 
Sbjct: 57  IKVFFRIYDVEGTTAYSKFEGHRLMRDYVRSLVRRGTSRIDGVIDVVTKDGYKVRVAGLA 116

Query: 522 FTKRR 536
           FT RR
Sbjct: 117 FTTRR 121
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>RS3A_SULTO (Q975F8) 30S ribosomal protein S3Ae|
          Length = 193

 Score = 63.5 bits (153), Expect = 4e-10
 Identities = 42/131 (32%), Positives = 66/131 (50%)
 Frame = +3

Query: 162 DPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQAF 341
           D +  K W+ I AP  F    +G T          A++ L  +V E +L DL GD    +
Sbjct: 9   DKWKLKKWFTIVAPKTFGEVVLGTTPAFD------ANQALNRKV-ETTLYDLTGDYSLVY 61

Query: 342 RKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFCIG 521
             +  R   V+G  +LT F G + + D +RSLVR+  + I+A  DV T D Y+LR+  + 
Sbjct: 62  VHLYFRVIGVEGDRLLTRFAGHELSRDYIRSLVRRKSSKIDAITDVTTKDGYVLRVKGLA 121

Query: 522 FTKRRPNQVKR 554
            T  R ++ ++
Sbjct: 122 LTTYRAHRSQK 132
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>RS3A_HALMA (Q5V296) 30S ribosomal protein S3Ae|
          Length = 213

 Score = 62.0 bits (149), Expect = 1e-09
 Identities = 34/121 (28%), Positives = 61/121 (50%)
 Frame = +3

Query: 174 KKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQAFRKIR 353
           +K WY ++AP  F+   +GKT            + +  R  E +L +L  D  +   K+ 
Sbjct: 12  QKRWYTVQAPEQFDREVLGKTPAEEP-------DKVLGRTIETTLGELTNDASENNTKLT 64

Query: 354 LRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFCIGFTKR 533
            +  +V   +  T F   + T D LRSLVR+  + +EA++ V TTD+Y +++  +  T +
Sbjct: 65  FKINEVASDSAYTEFIRHELTRDYLRSLVRRGSSKVEAYITVLTTDDYRVQIQPVAVTTK 124

Query: 534 R 536
           +
Sbjct: 125 K 125
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>RS3A_METMP (Q6LZG0) 30S ribosomal protein S3Ae|
          Length = 225

 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 38/125 (30%), Positives = 61/125 (48%)
 Frame = +3

Query: 162 DPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQAF 341
           D +  K WYDI  P  F    IG+T  +           L  R+ E+SL DL  +  +  
Sbjct: 17  DTWKSKVWYDIYTPQSFGGDVIGQTPANDPAN-------LIGRISEISLRDLTNEHSKHM 69

Query: 342 RKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFCIG 521
            ++  + + V G N  + F G D T + L+S VR+ ++ I A V+V+T D + +R+  + 
Sbjct: 70  TRMYFKVDGVSGNNATSQFVGHDTTREYLKSQVRRRRSKINAIVEVRTKDGFKVRVKALV 129

Query: 522 FTKRR 536
            T  R
Sbjct: 130 LTAVR 134
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>RS3A_SULAC (Q4JB17) 30S ribosomal protein S3Ae|
          Length = 197

 Score = 60.5 bits (145), Expect = 3e-09
 Identities = 41/117 (35%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
 Frame = +3

Query: 162 DPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQAF 341
           D +  K WY I AP +F     G+ L+  T    I ++ L  ++ EV+L DL GD +  +
Sbjct: 11  DKWKLKKWYVITAPKVF-----GEALLGSTPAYDI-NKALSRKI-EVTLYDLTGDYNLVY 63

Query: 342 RKIRLRA-EDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRL 509
             +  +   ++ G  + T F+G + + D +RSLVR+  + I A VDV T D YMLR+
Sbjct: 64  IHLYFKILGNISGDKLSTIFYGHELSRDYIRSLVRRKSSKINAVVDVTTKDGYMLRV 120
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>RS3A_SULSO (Q9UXD4) 30S ribosomal protein S3Ae|
          Length = 208

 Score = 57.4 bits (137), Expect = 3e-08
 Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
 Frame = +3

Query: 162 DPFTKKDWYDIKAPTLFNTRNIGKTL---VSRTQGTKIASEGLKHRVFEVSLADLQGDED 332
           D +  K WY +  P  F   ++G T    +++T G ++          E +L DL GD  
Sbjct: 10  DKWKMKKWYSVITPKAFGEVSLGSTPAYDITQTIGRRV----------ETTLYDLTGDFS 59

Query: 333 QAFRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLF 512
           Q +  +  +    +G  ++T F G + + D LRSL+R+  + I +  DV T D Y++R+ 
Sbjct: 60  QVYVHLYFKIIGNEGDRLITRFVGHELSRDYLRSLIRRKSSKINSIFDVTTKDGYVVRVK 119

Query: 513 CIGFTKRRPNQVKR 554
            +  T  + +Q ++
Sbjct: 120 GLVLTTYKCHQSQK 133
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>RS3A_AERPE (Q9YCV8) 30S ribosomal protein S3Ae|
          Length = 221

 Score = 57.4 bits (137), Expect = 3e-08
 Identities = 37/125 (29%), Positives = 59/125 (47%)
 Frame = +3

Query: 162 DPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQAF 341
           D +  K W+ + AP LF     G+T++  T       + L  RV E +L D+ GD     
Sbjct: 15  DTWRLKKWFKVVAPPLF-----GETVLGTTPADD--PDKLIGRVMETTLFDITGDYSYVH 67

Query: 342 RKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFCIG 521
            K+  +   V+G    T F G +   D +R L R+  + +    +V T D Y LR+  + 
Sbjct: 68  VKMYFQVVRVEGDTAYTRFKGHELLRDYIRGLTRRKSSKVTGIFNVWTKDGYGLRVTAMA 127

Query: 522 FTKRR 536
           FT++R
Sbjct: 128 FTRQR 132
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>RS3A_HALSA (Q9HRA5) 30S ribosomal protein S3Ae|
          Length = 206

 Score = 57.0 bits (136), Expect = 4e-08
 Identities = 34/124 (27%), Positives = 62/124 (50%)
 Frame = +3

Query: 174 KKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQAFRKIR 353
           +K WY + AP  F+   +G+TL           + +  R  + +L+D++   D    K+ 
Sbjct: 12  EKRWYTVLAPEEFDRAELGETLAEEP-------DQVYDRTIQAALSDVRDGGDNNI-KLT 63

Query: 354 LRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFCIGFTKR 533
            + +DV   +  T F   + T D  RSLVR+  + +   V V TTD+Y +R+  + +T +
Sbjct: 64  FQIDDVGSDSASTQFVQAELTRDYQRSLVRRGSSKVAVTVTVLTTDDYRVRIQPVAYTTK 123

Query: 534 RPNQ 545
           + +Q
Sbjct: 124 QADQ 127
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>RS3A_THEVO (Q978Z2) 30S ribosomal protein S3Ae|
          Length = 215

 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 33/131 (25%), Positives = 62/131 (47%)
 Frame = +3

Query: 162 DPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQAF 341
           + + +K WY ++AP    ++ +   L          S  + +RV EV +++L G+  ++ 
Sbjct: 12  EKWKEKVWYTVEAPPYLGSKEVSVALGED-------SNSMVNRVVEVPISELTGNFKKSN 64

Query: 342 RKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFCIG 521
            K   R  + +G    T F G     D +R LVR+ +  I+   DVKT+DN ++ +  + 
Sbjct: 65  EKALFRITNCEGTKCKTIFIGHYIGDDYIRRLVRRRKERIDIIEDVKTSDNSIITVKIVV 124

Query: 522 FTKRRPNQVKR 554
            T  +    K+
Sbjct: 125 VTDGKVTNTKK 135
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>RS3A_THEAC (Q9HJ08) 30S ribosomal protein S3Ae|
          Length = 215

 Score = 46.2 bits (108), Expect = 6e-05
 Identities = 29/114 (25%), Positives = 54/114 (47%)
 Frame = +3

Query: 162 DPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQAF 341
           + + +K WY +++P    ++ +   L           E + +R+ EV ++DL G+  ++ 
Sbjct: 12  EKWKEKTWYTVESPPYLGSKEVTVALGEDP-------ESMVNRIVEVPISDLTGNFKKSN 64

Query: 342 RKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYML 503
            K   R    +G    T F G     D +R LVR+ +  I+   DVKT+D  ++
Sbjct: 65  EKALFRITGCEGTKCKTIFIGHYIGDDYIRRLVRRRKERIDIIEDVKTSDGSII 118
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>RS3A_PICTO (Q6KYU3) 30S ribosomal protein S3Ae|
          Length = 209

 Score = 46.2 bits (108), Expect = 6e-05
 Identities = 32/116 (27%), Positives = 53/116 (45%)
 Frame = +3

Query: 156 TVDPFTKKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQ 335
           T D + +K WY I AP+    R I    +S      +    +  R  EV ++D  G+  +
Sbjct: 9   TKDKWKEKTWYTIVAPSFLGEREIA---LSPAADPSL----MIGRKVEVPVSDFTGNFRK 61

Query: 336 AFRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYML 503
           +   +  R ++  GK   T F G   + D +R +VR+ +  I+  +  KT D Y L
Sbjct: 62  SSTMVIFRVKECTGKRCTTEFIGHKVSDDTIRRMVRRRKERIDIIMPSKTKDGYRL 117
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>NCAP_INBP9 (O36433) Nucleoprotein|
          Length = 560

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 21/52 (40%), Positives = 29/52 (55%)
 Frame = +1

Query: 7   SGRAQTLAPILPGVRAATLPSPSPSRTRLQPWRSARTSASRKVGREAKRKRS 162
           SG + T  PI   +R ATL  PS  RTR      A TS+   VGR+ ++K++
Sbjct: 23  SGTSGTTRPI---IRPATLAPPSNKRTRNPSPERATTSSEADVGRKTQKKQT 71
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>RS3A_NANEQ (Q74N14) 30S ribosomal protein S3Ae|
          Length = 198

 Score = 33.9 bits (76), Expect = 0.32
 Identities = 28/121 (23%), Positives = 51/121 (42%)
 Frame = +3

Query: 174 KKDWYDIKAPTLFNTRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDQAFRKIR 353
           +K W+ IKAP +FN   +G+T   +        E +  R  E+++A +  +      K  
Sbjct: 12  RKIWFTIKAPAIFNEVELGETPAYK-------PEQVIGRRVELNMALVTNNYQLQNYKGI 64

Query: 354 LRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRLFCIGFTKR 533
            +   V+G    T   G+      ++  V   +  I     +K  DN ++R+  +  T R
Sbjct: 65  FKITKVEGTTAKTELEGIKMYESIIQKWVEPGRDKITDSFVIKDKDNRLVRVKPVLITNR 124

Query: 534 R 536
           R
Sbjct: 125 R 125
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>NCAP_INBSI (P04666) Nucleoprotein|
          Length = 560

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 20/53 (37%), Positives = 29/53 (54%)
 Frame = +1

Query: 4   LSGRAQTLAPILPGVRAATLPSPSPSRTRLQPWRSARTSASRKVGREAKRKRS 162
           +SG +    PI   +R ATL  PS  RTR      A TS+   VGR+ ++K++
Sbjct: 22  ISGTSGATRPI---IRPATLAPPSNKRTRNPSPERATTSSEADVGRKTQKKQT 71
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>NCAP_INBAA (P11102) Nucleoprotein|
          Length = 560

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 20/54 (37%), Positives = 28/54 (51%)
 Frame = +1

Query: 1   TLSGRAQTLAPILPGVRAATLPSPSPSRTRLQPWRSARTSASRKVGREAKRKRS 162
           T SG +    PI   +R ATL  PS  RTR      A TS+   +GR  ++K++
Sbjct: 21  TTSGTSGATRPI---IRPATLAPPSNKRTRNPSPERATTSSEADIGRRTQKKQT 71
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>CJ006_HUMAN (Q8IX21) Protein C10orf6|
          Length = 1173

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +1

Query: 31  PILPGVRAATLPSPSPSRTRLQPWRSARTSASRKVGREAKRKRSI 165
           P  PG  ++  P  SP R  L+P  +A  +A ++      RK+SI
Sbjct: 7   PARPGFPSSPAPGSSPPRCHLRPGSTAHAAAGKRTESPGDRKQSI 51
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>CJ006_PONPY (Q5REF4) Protein C10orf6 homolog|
          Length = 1174

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +1

Query: 31  PILPGVRAATLPSPSPSRTRLQPWRSARTSASRKVGREAKRKRSI 165
           P  PG  ++  P  SP R  L+P  +A  +A ++      RK+SI
Sbjct: 7   PARPGFPSSPAPGSSPPRCHLRPGSTAHAAAGKRTESPGDRKQSI 51
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>CJ006_MOUSE (Q6P9P0) Protein C10orf6 homolog|
          Length = 1278

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +1

Query: 31  PILPGVRAATLPSPSPSRTRLQPWRSARTSASRKVGREAKRKRSI 165
           P  PG  ++  P  SP R  L+P  +A  +A ++      RK+SI
Sbjct: 7   PARPGFPSSPAPGSSPPRCHLRPGSTAPAAAGKRTESPGDRKQSI 51
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>DNAK_NITEU (O06430) Chaperone protein dnaK (Heat shock protein 70) (Heat shock|
           70 kDa protein) (HSP70)
          Length = 644

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
 Frame = -1

Query: 425 LVGGEIHTPKVCENILSLHILCTKSDL-PESLVLITLEVCQGNLKNSVLKTLRCNLGPLC 249
           LVGG+   PKV E +  +     + D+ P+  V I   +  G LK  V   L  ++ PL 
Sbjct: 339 LVGGQTRMPKVQEKVKEIFGKEPRKDVNPDEAVAIGAAIQGGVLKGDVKDVLLLDVTPLS 398

Query: 248 PGDEGLADV 222
            G E L  V
Sbjct: 399 LGIETLGGV 407
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>ARMX6_MOUSE (Q8K3A6) Protein ARMCX6|
          Length = 301

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 2/121 (1%)
 Frame = -1

Query: 398 KVCENILSLHILCTKSDLPES--LVLITLEVCQGNLKNSVLKTLRCNLGPLCPGDEGLAD 225
           +VC   L   + C KS L ++   +LI++ V    + N + K++     PL     G A+
Sbjct: 201 EVCRETL---LCCCKSFLQQAGLSLLISMTV----INNMLAKSVSDLKFPLLSKGSGCAE 253

Query: 224 VAGVEQRRRLYVIPVLLGEGIDRFLFASLPTFRDALVLADRHGCNLVREGEGEGRVAART 45
           V G+E+   L   PVL+GE +   + +S               C   R G  E  V A +
Sbjct: 254 VRGLEELMSLSEKPVLVGEALAAQMLSSFM-------------CLFTRSGSREMLVEAIS 300

Query: 44  P 42
           P
Sbjct: 301 P 301
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>AKR_CHICK (Q90655) Homeobox protein AKR (Avian knotted-related protein)|
          Length = 269

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -3

Query: 195 LCHTSPSW*RDRPFSFCFPSDLSRCACSCRPP 100
           +CHT+ +  +D PF FC P D+ +     +PP
Sbjct: 170 ICHTTVTALKDAPFHFCQPGDVGQTTDLQQPP 201
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>RFBC_MYXXA (Q50864) O-antigen biosynthesis protein rfbC|
          Length = 1275

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 11/60 (18%)
 Frame = -1

Query: 152  LFASLPT-FRDALVLADRHGCNL---------VREGEGEGRVAARTPGRMGA-RVWARPE 6
            ++A + T FR A ++  RHG            VR G+ E RVAA  PG +GA RV  RPE
Sbjct: 924  VYAGIHTIFRFADLMQRRHGVRSDFVIYDQPNVRPGDIEARVAAICPGAVGAVRVLRRPE 983
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>MET_PANTR (Q2QLF1) Hepatocyte growth factor receptor precursor (EC 2.7.10.1)|
           (HGF receptor) (Scatter factor receptor) (SF receptor)
           (HGF/SF receptor) (Met proto-oncogene tyrosine kinase)
           (c-Met)
          Length = 1390

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -1

Query: 356 KSDLPESLVLITLEVCQGNLKNSVLKTLRCNLGP 255
           K DL ++ VL+  E C   L  S + TL+C +GP
Sbjct: 595 KFDLKKTRVLLGNESCTLTLSESTMNTLKCTVGP 628
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>MET_HUMAN (P08581) Hepatocyte growth factor receptor precursor (EC 2.7.10.1)|
           (HGF receptor) (Scatter factor receptor) (SF receptor)
           (HGF/SF receptor) (Met proto-oncogene tyrosine kinase)
           (c-Met)
          Length = 1390

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -1

Query: 356 KSDLPESLVLITLEVCQGNLKNSVLKTLRCNLGP 255
           K DL ++ VL+  E C   L  S + TL+C +GP
Sbjct: 595 KFDLKKTRVLLGNESCTLTLSESTMNTLKCTVGP 628
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>NCAP_INBAC (P13884) Nucleoprotein|
          Length = 560

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +1

Query: 40  PGVRAATLPSPSPSRTRLQPWRSARTSASRKVGREAKRKRS 162
           P ++ ATL  PS  RTR      A TS+   VGR  ++K++
Sbjct: 31  PIIKPATLAPPSNKRTRNPSPERAATSSEADVGRRTQKKQT 71
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>MET_CALJA (Q2QLG5) Hepatocyte growth factor receptor precursor (EC 2.7.10.1)|
           (HGF receptor) (Scatter factor receptor) (SF receptor)
           (HGF/SF receptor) (Met proto-oncogene tyrosine kinase)
           (c-Met)
          Length = 1381

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -1

Query: 356 KSDLPESLVLITLEVCQGNLKNSVLKTLRCNLGP 255
           K DL ++ VL+  E C   L  S + TL+C +GP
Sbjct: 595 KFDLKKTRVLLGNESCTLTLSESTMNTLKCTVGP 628
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>RNPS1_XENLA (Q5XG24) RNA-binding protein with serine-rich domain 1|
          Length = 283

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +1

Query: 67  SPSPSRTRLQPWRSARTSASRKVGREAKRKRSIPSP 174
           SPSPSR R    R +R+ + +    E +RKR  PSP
Sbjct: 100 SPSPSRRRHDNRRRSRSKSKQPKRDEKERKRRSPSP 135
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>FOLD_HELPY (P56467) FolD bifunctional protein [Includes:|
           Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5);
           Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
          Length = 290

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 12/23 (52%), Positives = 18/23 (78%)
 Frame = -2

Query: 493 LSVVLTSTWASISVCHFLTSDLS 425
           LS+++ +  AS+SVCH LT D+S
Sbjct: 178 LSMLMLNAGASVSVCHILTKDIS 200
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>FOLD_HELPJ (Q9ZLQ4) FolD bifunctional protein [Includes:|
           Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5);
           Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]
          Length = 290

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 12/23 (52%), Positives = 18/23 (78%)
 Frame = -2

Query: 493 LSVVLTSTWASISVCHFLTSDLS 425
           LS+++ +  AS+SVCH LT D+S
Sbjct: 178 LSMLMLNAGASVSVCHILTKDIS 200
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>TENX_HUMAN (P22105) Tenascin-X precursor (TN-X) (Hexabrachion-like protein)|
          Length = 4289

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = -3

Query: 135 DLSRCACSCRPPWLQP 88
           DLSRC CSC P W  P
Sbjct: 150 DLSRCTCSCEPGWGGP 165
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>ZN619_HUMAN (Q8N2I2) Zinc finger protein 619|
          Length = 560

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
 Frame = -1

Query: 449 PLPYK*SKLVGGEIHTPKVCENILSLHILCTKSDLP-----ESLVLITLEVCQGNLKNSV 285
           P PY    + GG+      C+ ++S+ I  T+SD+P      S+   +L+ C G      
Sbjct: 4   PAPYAEGPIQGGDAGELCKCDFLVSISIPQTRSDIPAGARRSSMGPRSLDTCWGRGPERH 63

Query: 284 LKTLRCN 264
           +  L CN
Sbjct: 64  VHRLECN 70
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>NCAP_INBAD (P13885) Nucleoprotein|
          Length = 560

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +1

Query: 40  PGVRAATLPSPSPSRTRLQPWRSARTSASRKVGREAKRKRS 162
           P ++ ATL  PS  RTR      A TS+   VGR  ++K++
Sbjct: 31  PIIKPATLAPPSNKRTRNPSPERATTSSEAIVGRRTQKKQT 71
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>BLVR_BOVIN (Q03368) Bovine leukemia virus cell receptor precursor (BLV-R)|
           (BLVPCP1)
          Length = 843

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = -1

Query: 173 GEGIDRFLFASLPTFRDALV-LADRHGCNLVREGEGEGRVAARTPGRMGARVWAR 12
           GE +D +L  + P    AL  L       +++EG+ E R   R P R G+R W R
Sbjct: 224 GEDLDFWLSTTPPAATPALEELEVNTTVTVLKEGQEEPRERNRMPKRTGSRTWRR 278
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>RNPS1_RAT (Q6AYK1) RNA-binding protein with serine-rich domain 1|
          Length = 305

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = +1

Query: 67  SPSPSRTRLQPWRSARTSASRKVGREAKRKRSIPSP 174
           SPSPSR R    R +R+ +      E +RKR  PSP
Sbjct: 123 SPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSP 158
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>RNPS1_PONPY (Q5NVM8) RNA-binding protein with serine-rich domain 1|
          Length = 305

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = +1

Query: 67  SPSPSRTRLQPWRSARTSASRKVGREAKRKRSIPSP 174
           SPSPSR R    R +R+ +      E +RKR  PSP
Sbjct: 123 SPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSP 158
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>RNPS1_MOUSE (Q99M28) RNA-binding protein with serine-rich domain 1|
          Length = 305

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = +1

Query: 67  SPSPSRTRLQPWRSARTSASRKVGREAKRKRSIPSP 174
           SPSPSR R    R +R+ +      E +RKR  PSP
Sbjct: 123 SPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSP 158
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>RNPS1_MACFA (Q4R5N1) RNA-binding protein with serine-rich domain 1|
          Length = 305

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = +1

Query: 67  SPSPSRTRLQPWRSARTSASRKVGREAKRKRSIPSP 174
           SPSPSR R    R +R+ +      E +RKR  PSP
Sbjct: 123 SPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSP 158
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>RNPS1_HUMAN (Q15287) RNA-binding protein with serine-rich domain 1 (SR-related|
           protein LDC2)
          Length = 305

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = +1

Query: 67  SPSPSRTRLQPWRSARTSASRKVGREAKRKRSIPSP 174
           SPSPSR R    R +R+ +      E +RKR  PSP
Sbjct: 123 SPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSP 158
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>MET_OTOGA (Q2QLH6) Hepatocyte growth factor receptor precursor (EC 2.7.10.1)|
           (HGF receptor) (Scatter factor receptor) (SF receptor)
           (HGF/SF receptor) (Met proto-oncogene tyrosine kinase)
           (c-Met)
          Length = 1382

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -1

Query: 356 KSDLPESLVLITLEVCQGNLKNSVLKTLRCNLGP 255
           K DL ++ VL+  E C   L  S   TL+C +GP
Sbjct: 596 KFDLKKTRVLLGNESCTLTLSESTTNTLKCTVGP 629
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>SYI_COREF (Q8FNV0) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
           ligase) (IleRS)
          Length = 1054

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +3

Query: 165 PFTKKDWYDIKAPTLFNTRNIGKT 236
           PF  KDW+D  AP  F    IG+T
Sbjct: 568 PFENKDWFDTHAPADFIVEYIGQT 591
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>BMP2_HUMAN (P12643) Bone morphogenetic protein 2 precursor (BMP-2) (BMP-2A)|
          Length = 396

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 11/60 (18%)
 Frame = +2

Query: 95  SHGGRQEQAHLERSEGKQKEN---GRSLHQE--------GLV*HKGADVVQHPQHRQDPR 241
           +HG   E AHLE  +G  K +    RSLHQ+         L+   G D   HP H+++ R
Sbjct: 223 NHGFVVEVAHLEEKQGVSKRHVRISRSLHQDEHSWSQIRPLLVTFGHDGKGHPLHKREKR 282
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>TTUC_PSEPU (Q51945) Tartrate dehydrogenase/decarboxylase (EC 1.1.1.93) (EC|
           4.1.1.73) (TDH) (D-malate dehydrogenase
           [decarboxylating]) (EC 1.1.1.83)
          Length = 364

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 1/106 (0%)
 Frame = -1

Query: 515 AEQPEHVIVSGLNINMGLN*CLPLPYK*SKLVGGEIHTPKVCENILSLHILCTKSDL-PE 339
           AE+ E   V+    + G+   + +PY   +      H P V  +   + ILC +  L PE
Sbjct: 178 AEKRERKHVTSATKSNGM--AISMPYWDKRTEAMAAHYPHVSWDKQHIDILCARFVLQPE 235

Query: 338 SLVLITLEVCQGNLKNSVLKTLRCNLGPLCPGDEGLADVAGVEQRR 201
              ++   V   NL   +L     +LGP C G  G+A  A +   R
Sbjct: 236 RFDVV---VVASNLFGDILS----DLGPACAGTIGIAPSANLNPER 274
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>MET_MOUSE (P16056) Hepatocyte growth factor receptor precursor (EC 2.7.10.1)|
           (HGF receptor) (Scatter factor receptor) (SF receptor)
           (HGF/SF receptor) (Met proto-oncogene tyrosine kinase)
           (c-Met)
          Length = 1379

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
 Frame = -1

Query: 455 CLPLPYK*----SKLVGGEIHTPKVCENILSLHILCTKSDLPESLVLITLEVCQGNLKNS 288
           CLP  YK     + L GG + T  +C           K DL ++ VL+  E C   L  S
Sbjct: 560 CLPAVYKVFPTSAPLEGGTVLT--ICGWDFGFR-KNNKFDLRKTKVLLGNESCTLTLSES 616

Query: 287 VLKTLRCNLGP 255
              TL+C +GP
Sbjct: 617 TTNTLKCTVGP 627
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>MET_PIG (Q2QLE0) Hepatocyte growth factor receptor precursor (EC 2.7.10.1)|
           (HGF receptor) (Scatter factor receptor) (SF receptor)
           (HGF/SF receptor) (Met proto-oncogene tyrosine kinase)
           (c-Met)
          Length = 1381

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -1

Query: 356 KSDLPESLVLITLEVCQGNLKNSVLKTLRCNLGP 255
           K DL ++ VL+  E C   L  S   TL+C +GP
Sbjct: 595 KFDLRKTKVLLGNESCTLTLSESTTNTLKCTVGP 628
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>RPP1_YEAST (P38786) Ribonuclease P protein subunit RPP1 (EC 3.1.26.5) (RNaseP|
           protein 1)
          Length = 293

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 6/86 (6%)
 Frame = -1

Query: 425 LVGGEIHTPKVCENILSLHILCTKSDLPESLV------LITLEVCQGNLKNSVLKTLRCN 264
           ++G    +P  C NIL +  L     LP          L +L +  G L+N   K     
Sbjct: 190 VIGSGAMSPLECRNILGVTSLIKNLGLPSDRCSKAMGDLASLVLLNGRLRNKSHKQTIVT 249

Query: 263 LGPLCPGDEGLADVAGVEQRRRLYVI 186
            G    GD+ + DV G++  + + V+
Sbjct: 250 GGGSGNGDDVVNDVQGIDDVQTIKVV 275
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>MET_RAT (P97523) Hepatocyte growth factor receptor precursor (EC 2.7.10.1)|
           (HGF receptor) (Scatter factor receptor) (SF receptor)
           (HGF/SF receptor) (Met proto-oncogene tyrosine kinase)
           (c-Met)
          Length = 1382

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -1

Query: 356 KSDLPESLVLITLEVCQGNLKNSVLKTLRCNLGP 255
           K DL ++ VL+  E C   L  S   TL+C +GP
Sbjct: 596 KFDLRKTKVLLGNESCTLTLSESTTNTLKCTVGP 629
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>OSBL3_HUMAN (Q9H4L5) Oxysterol-binding protein-related protein 3 (OSBP-related|
           protein 3) (ORP-3)
          Length = 887

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 6/54 (11%)
 Frame = +1

Query: 4   LSGRAQTLAPILPGVRAAT------LPSPSPSRTRLQPWRSARTSASRKVGREA 147
           L    QTL P+L   R A       LP+P PS + +  W   R +  + + + A
Sbjct: 491 LDNERQTLGPVLDSGREAKSRRRTCLPAPCPSSSNISLWNILRNNIGKDLSKVA 544
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>ALU6_HUMAN (P39193) Alu subfamily SP sequence contamination warning entry|
          Length = 593

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
 Frame = +1

Query: 10  GRAQTLAPILPGV---RAATLPSPSPSRTRLQPWRSARTSASRKVGREAKRKRSIPS 171
           GRA+ L P++P +    A   P    SR     WR+  ++ + K+ R   R   IP+
Sbjct: 1   GRARWLTPVIPALWEAEAGGSPEVGSSRPAXPTWRNPVSTKNTKISRAWWRMPVIPA 57


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,215,640
Number of Sequences: 219361
Number of extensions: 1575855
Number of successful extensions: 5832
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 5360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5791
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4545742239
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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