ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart56h03 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB181482.1| Bromus inermis BiRP1 mRNA for ribosomal protein, complete cds Length = 1053 Score = 829 bits (418), Expect = 0.0 Identities = 493/518 (95%) Strand = Plus / Plus Query: 37 aggagaaggagcaggcggcgggggtgcccgaagaggagaagcacggcgacctagcccgag 96 ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||| Sbjct: 27 aggagaaggagcaggcggcggcggtgcgcgaagagaagaagcacggcgacctagcccgag 86 Query: 97 ctcgcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcat 156 || ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 87 cttgcaaccatggcgaggggtttgaagaagcatctcaagaggctcaatgccccgtctcac 146 Query: 157 tggatgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaag 216 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 147 tggatgctggacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaag 206 Query: 217 gccagggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacg 276 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 gccagggagtgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacc 266 Query: 277 taccgtgaagtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgc 336 ||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||| Sbjct: 267 taccgtgaagtgcaatctatcctgatgcagcgtcacatcatggttgatggaaaggtccga 326 Query: 337 actgacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgag 396 |||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||| Sbjct: 327 actgacaagacctaccctgctggtttcatggatatcatttccattcccaagactggtgag 386 Query: 397 aactacaggcttctgtatgacaccaagggccgcttccgccttcactctgtcagggatgag 456 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 387 aactacaggcttctgtatgacaccaagggccgcttccgcctgcactctgtcagggatgag 446 Query: 457 gatgctaagttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatccca 516 ||||| |||| |||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 447 gatgccaagtacaagctctgcaaggtcaggtctgtccagtttggccagaagggtatccca 506 Query: 517 tacctgaacacctatgatggccgcaccatccgctaccc 554 ||||| |||||| ||||||| ||||||||||||||||| Sbjct: 507 tacctcaacaccaatgatggtcgcaccatccgctaccc 544
>dbj|AK103949.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B09, full insert sequence Length = 1016 Score = 545 bits (275), Expect = e-152 Identities = 428/479 (89%) Strand = Plus / Plus Query: 76 agcacggcgacctagcccgagctcgcaaccatggctaggggtttgaagaagcatctgaag 135 |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 66 agcacggcgacctagcccgacctcgcaaccatggcaaggggtttgaagaagcatctgaag 125 Query: 136 aggctcaatgccccgtctcattggatgcttgacaagcttggtggagcttttgcccccaag 195 ||||||||||| || ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 126 aggctcaatgcgcccaagcattggatgctcgacaagcttggtggagcttttgcccccaag 185 Query: 196 ccatcatctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaac 255 ||||| ||||||||||||||| ||||||| |||||||||||||||||||| | |||||| Sbjct: 186 ccatcttctggtcctcacaagtccagggagtgcctgcctctgatcctcattatcaggaac 245 Query: 256 agactgaaatatgctctcacgtaccgtgaagtgcaatctatccttatgcagcgtcatatt 315 || || || |||||||| || |||||||| || |||||||| |||||||| ||| | Sbjct: 246 aggctcaagtatgctctgacataccgtgaggttatttctatcctcatgcagcgccatgtc 305 Query: 316 atggttgatggaaaggtccgcactgacaagacctaccctgctggtttcatggacattatt 375 |||||||||| |||||| | ||||||||||||||||| |||||||||||||| | ||| Sbjct: 306 ttggttgatggcaaggtcaggactgacaagacctacccagctggtttcatggatgtcatt 365 Query: 376 tctattcccaagactggtgagaactacaggcttctgtatgacaccaagggccgcttccgc 435 || || |||||||||||||||||||||||||||||||| ||||||||||| || |||||| Sbjct: 366 tccatccccaagactggtgagaactacaggcttctgtacgacaccaagggacgtttccgc 425 Query: 436 cttcactctgtcagggatgaggatgctaagttcaagctctgcaaggtcaggtctgtccag 495 ||||| ||||||| |||||||||||||||||||||||| |||||||| ||||||| ||| Sbjct: 426 cttcagtctgtcaaggatgaggatgctaagttcaagctttgcaaggttcggtctgtgcag 485 Query: 496 ttcggccagaagggcatcccatacctgaacacctatgatggccgcaccatccgctaccc 554 || ||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 486 tttggccagaagggaatcccctacctgaacacctatgatggtcgcaccatccgctaccc 544
>dbj|AK102423.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093E13, full insert sequence Length = 1157 Score = 545 bits (275), Expect = e-152 Identities = 428/479 (89%) Strand = Plus / Plus Query: 76 agcacggcgacctagcccgagctcgcaaccatggctaggggtttgaagaagcatctgaag 135 |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 70 agcacggcgacctagcccgacctcgcaaccatggcaaggggtttgaagaagcatctgaag 129 Query: 136 aggctcaatgccccgtctcattggatgcttgacaagcttggtggagcttttgcccccaag 195 ||||||||||| || ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 130 aggctcaatgcgcccaagcattggatgctcgacaagcttggtggagcttttgcccccaag 189 Query: 196 ccatcatctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaac 255 ||||| ||||||||||||||| ||||||| |||||||||||||||||||| | |||||| Sbjct: 190 ccatcttctggtcctcacaagtccagggagtgcctgcctctgatcctcattatcaggaac 249 Query: 256 agactgaaatatgctctcacgtaccgtgaagtgcaatctatccttatgcagcgtcatatt 315 || || || |||||||| || |||||||| || |||||||| |||||||| ||| | Sbjct: 250 aggctcaagtatgctctgacataccgtgaggttatttctatcctcatgcagcgccatgtc 309 Query: 316 atggttgatggaaaggtccgcactgacaagacctaccctgctggtttcatggacattatt 375 |||||||||| |||||| | ||||||||||||||||| |||||||||||||| | ||| Sbjct: 310 ttggttgatggcaaggtcaggactgacaagacctacccagctggtttcatggatgtcatt 369 Query: 376 tctattcccaagactggtgagaactacaggcttctgtatgacaccaagggccgcttccgc 435 || || |||||||||||||||||||||||||||||||| ||||||||||| || |||||| Sbjct: 370 tccatccccaagactggtgagaactacaggcttctgtacgacaccaagggacgtttccgc 429 Query: 436 cttcactctgtcagggatgaggatgctaagttcaagctctgcaaggtcaggtctgtccag 495 ||||| ||||||| |||||||||||||||||||||||| |||||||| ||||||| ||| Sbjct: 430 cttcagtctgtcaaggatgaggatgctaagttcaagctttgcaaggttcggtctgtgcag 489 Query: 496 ttcggccagaagggcatcccatacctgaacacctatgatggccgcaccatccgctaccc 554 || ||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 490 tttggccagaagggaatcccctacctgaacacctatgatggtcgcaccatccgctaccc 548
>dbj|AK061776.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-D06, full insert sequence Length = 1079 Score = 545 bits (275), Expect = e-152 Identities = 428/479 (89%) Strand = Plus / Plus Query: 76 agcacggcgacctagcccgagctcgcaaccatggctaggggtttgaagaagcatctgaag 135 |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 62 agcacggcgacctagcccgacctcgcaaccatggcaaggggtttgaagaagcatctgaag 121 Query: 136 aggctcaatgccccgtctcattggatgcttgacaagcttggtggagcttttgcccccaag 195 ||||||||||| || ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 122 aggctcaatgcgcccaagcattggatgctcgacaagcttggtggagcttttgcccccaag 181 Query: 196 ccatcatctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaac 255 ||||| ||||||||||||||| ||||||| |||||||||||||||||||| | |||||| Sbjct: 182 ccatcttctggtcctcacaagtccagggagtgcctgcctctgatcctcattatcaggaac 241 Query: 256 agactgaaatatgctctcacgtaccgtgaagtgcaatctatccttatgcagcgtcatatt 315 || || || |||||||| || |||||||| || |||||||| |||||||| ||| | Sbjct: 242 aggctcaagtatgctctgacataccgtgaggttatttctatcctcatgcagcgccatgtc 301 Query: 316 atggttgatggaaaggtccgcactgacaagacctaccctgctggtttcatggacattatt 375 |||||||||| |||||| | ||||||||||||||||| |||||||||||||| | ||| Sbjct: 302 ttggttgatggcaaggtcaggactgacaagacctacccagctggtttcatggatgtcatt 361 Query: 376 tctattcccaagactggtgagaactacaggcttctgtatgacaccaagggccgcttccgc 435 || || |||||||||||||||||||||||||||||||| ||||||||||| || |||||| Sbjct: 362 tccatccccaagactggtgagaactacaggcttctgtacgacaccaagggacgtttccgc 421 Query: 436 cttcactctgtcagggatgaggatgctaagttcaagctctgcaaggtcaggtctgtccag 495 ||||| ||||||| |||||||||||||||||||||||| |||||||| ||||||| ||| Sbjct: 422 cttcagtctgtcaaggatgaggatgctaagttcaagctttgcaaggttcggtctgtgcag 481 Query: 496 ttcggccagaagggcatcccatacctgaacacctatgatggccgcaccatccgctaccc 554 || ||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 482 tttggccagaagggaatcccctacctgaacacctatgatggtcgcaccatccgctaccc 540
>emb|Y15009.1|OSY15009 Oryza sativa mRNA for ribosomal protein S4 Length = 1148 Score = 502 bits (253), Expect = e-139 Identities = 406/457 (88%) Strand = Plus / Plus Query: 76 agcacggcgacctagcccgagctcgcaaccatggctaggggtttgaagaagcatctgaag 135 ||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 36 agcacggtgacctagcccgacctcgcaaccatggcaaggggtttgaagaagcatctgaag 95 Query: 136 aggctcaatgccccgtctcattggatgcttgacaagcttggtggagcttttgcccccaag 195 ||||||||||| || ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 96 aggctcaatgcgcccaagcattggatgctcgacaagcttggtggagcttttgcccccaag 155 Query: 196 ccatcatctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaac 255 ||||| ||||||||||||||| ||||||| |||||||||||||||||||| | |||||| Sbjct: 156 ccatcttctggtcctcacaagtccagggagtgcctgcctctgatcctcattatcaggaac 215 Query: 256 agactgaaatatgctctcacgtaccgtgaagtgcaatctatccttatgcagcgtcatatt 315 || || || |||||||| || |||||||| || |||||||| |||||||| ||| | Sbjct: 216 aggctcaagtatgctctgacataccgtgaggttatttctatcctcatgcagcgccatgtc 275 Query: 316 atggttgatggaaaggtccgcactgacaagacctaccctgctggtttcatggacattatt 375 |||||||||| |||||| | ||||||||||||||||| |||||||||||||| | ||| Sbjct: 276 ttggttgatggcaaggtcaggactgacaagacctacccagctggtttcatggatgtcatt 335 Query: 376 tctattcccaagactggtgagaactacaggcttctgtatgacaccaagggccgcttccgc 435 || || |||||||||||||||||||||||||||||||| ||||||||||| || |||||| Sbjct: 336 tccatccccaagactggtgagaactacaggcttctgtacgacaccaagggacgtttccgc 395 Query: 436 cttcactctgtcagggatgaggatgctaagttcaagctctgcaaggtcaggtctgtccag 495 ||||| ||||||| |||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 396 cttcagtctgtcaaggatgaggatgctaagttcaagctttgcaaggttcggtctgtccag 455 Query: 496 ttcggccagaagggcatcccatacctgaacacctatg 532 || ||||||||||| || || |||||||||||||||| Sbjct: 456 tttggccagaagggaattccctacctgaacacctatg 492
>dbj|AK061826.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-C06, full insert sequence Length = 1035 Score = 466 bits (235), Expect = e-128 Identities = 415/475 (87%) Strand = Plus / Plus Query: 80 cggcgacctagcccgagctcgcaaccatggctaggggtttgaagaagcatctgaagaggc 139 ||||||| |||| |||||||||||||||||| ||||| |||||||||||||| ||||||| Sbjct: 62 cggcgacgtagctcgagctcgcaaccatggcgaggggattgaagaagcatctcaagaggc 121 Query: 140 tcaatgccccgtctcattggatgcttgacaagcttggtggagcttttgcccccaagccat 199 ||||||| || || |||||||| |||||||| || |||||||||||||||||||||| Sbjct: 122 tcaatgcgcccaagcactggatgctcgacaagctcggcggagcttttgcccccaagccat 181 Query: 200 catctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagac 259 | ||||| ||||||||| |||||||||||||||| |||||||||||| | |||||||| Sbjct: 182 cgtctggacctcacaagtccagggaatgcctgcccctgatcctcatcatcaggaacaggt 241 Query: 260 tgaaatatgctctcacgtaccgtgaagtgcaatctatccttatgcagcgtcatattatgg 319 |||| ||||| || || |||||||| || |||||||| |||||||| ||| | ||| Sbjct: 242 tgaagtatgcgctgacataccgtgaggttatctctatcctgatgcagcggcatgtcttgg 301 Query: 320 ttgatggaaaggtccgcactgacaagacctaccctgctggtttcatggacattatttcta 379 ||||||| |||||| | |||||||||||||||||||||||||||||||| | ||||| | Sbjct: 302 ttgatgggaaggtcaggactgacaagacctaccctgctggtttcatggatgtgatttcca 361 Query: 380 ttcccaagactggtgagaactacaggcttctgtatgacaccaagggccgcttccgccttc 439 |||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 362 ttccaaagactggtgagaactacaggcttctctatgacaccaagggtcgcttccgccttc 421 Query: 440 actctgtcagggatgaggatgctaagttcaagctctgcaaggtcaggtctgtccagttcg 499 | || |||| |||||||||||| ||||||||||| ||||| || ||||||||||||| | Sbjct: 422 agtccgtcaaggatgaggatgccaagttcaagctttgcaaagttcggtctgtccagtttg 481 Query: 500 gccagaagggcatcccatacctgaacacctatgatggccgcaccatccgctaccc 554 | ||||||||||| || || ||||||||||||||||| ||||||||||||||||| Sbjct: 482 gacagaagggcattccctatctgaacacctatgatggacgcaccatccgctaccc 536
>gb|AF015522.1|AF015522 Zea mays ribsomal protein S4 (rps4) mRNA, complete cds Length = 1090 Score = 410 bits (207), Expect = e-111 Identities = 393/455 (86%) Strand = Plus / Plus Query: 100 gcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattgg 159 ||||||||||||||||| ||||||||||| |||||||||||||||| || |||||| Sbjct: 79 gcaaccatggctaggggattgaagaagcacttgaagaggctcaatgcgcccaagcattgg 138 Query: 160 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggcc 219 ||||| ||||||||||| ||||||||||| ||||||||||| ||||| ||||||||| || Sbjct: 139 atgctcgacaagcttggcggagcttttgctcccaagccatcttctggacctcacaagtcc 198 Query: 220 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtac 279 ||||| ||||| ||||||||||||||| | |||||||| || || |||||||| | ||| Sbjct: 199 agggagtgccttcctctgatcctcatcatcaggaacaggctcaagtatgctctgaactac 258 Query: 280 cgtgaagtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcact 339 ||||| || |||||||| ||||| || ||| | | |||||||| |||||| | ||| Sbjct: 259 cgtgaggtcatttctatcctgatgcaacgccatgtacttgttgatggcaaggtcaggact 318 Query: 340 gacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgagaac 399 |||||||||||||||||||| |||||||| | ||||| || |||||||| |||||| Sbjct: 319 gacaagacctaccctgctgggttcatggatgtcatttccatccccaagacaatggagaac 378 Query: 400 tacaggcttctgtatgacaccaagggccgcttccgccttcactctgtcagggatgaggat 459 |||||||| || ||||||||||||||||||||||| |||||| | |||||||||||||| Sbjct: 379 tacaggctgctttatgacaccaagggccgcttccgtcttcacccaatcagggatgaggat 438 Query: 460 gctaagttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatcccatac 519 || |||||||||||||||||||| |||||||| ||||| ||||||||||||||||| ||| Sbjct: 439 gccaagttcaagctctgcaaggtgaggtctgttcagtttggccagaagggcatcccctac 498 Query: 520 ctgaacacctatgatggccgcaccatccgctaccc 554 ||||||||||| || |||||||||||||||||||| Sbjct: 499 ctgaacacctacgacggccgcaccatccgctaccc 533
>gb|AY525608.1| Zea mays ribosomal protein S4 mRNA, complete cds Length = 1037 Score = 392 bits (198), Expect = e-106 Identities = 396/462 (85%) Strand = Plus / Plus Query: 93 cgagctcgcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtc 152 |||||| || ||||||||||| || |||||||||||| |||||||||||||||| || Sbjct: 59 cgagcttgccaccatggctagaggattgaagaagcatttgaagaggctcaatgcgcccaa 118 Query: 153 tcattggatgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctca 212 ||||||||||| ||||||||||| ||||||||||| ||||||||||| ||||| ||||| Sbjct: 119 gcattggatgctggacaagcttggcggagcttttgctcccaagccatcttctggacctca 178 Query: 213 caaggccagggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgctct 272 |||| | ||||| |||||||| |||||||||||| | |||||||| || || |||||||| Sbjct: 179 caagtctagggagtgcctgccactgatcctcatcatcaggaacaggctcaagtatgctct 238 Query: 273 cacgtaccgtgaagtgcaatctatccttatgcagcgtcatattatggttgatggaaaggt 332 || |||||||| || || ||||| ||||| || ||| | | |||||||| ||||| Sbjct: 239 tacataccgtgaggtcatttccatcctgatgcaacgccatgtacttgttgatggcaaggt 298 Query: 333 ccgcactgacaagacctaccctgctggtttcatggacattatttctattcccaagactgg 392 | | || |||||||||||||||||||| |||||||| | ||||| || |||||||| Sbjct: 299 caggacagacaagacctaccctgctgggttcatggatgtcatttccatccccaagaccaa 358 Query: 393 tgagaactacaggcttctgtatgacaccaagggccgcttccgccttcactctgtcaggga 452 ||||||||||||||| ||||| || |||||||||||||||||||||||| | ||||||| Sbjct: 359 tgagaactacaggctgctgtacgataccaagggccgcttccgccttcacccaatcaggga 418 Query: 453 tgaggatgctaagttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcat 512 ||||||||||||||||||||| |||||||| |||||||| ||||| || ||||||||||| Sbjct: 419 tgaggatgctaagttcaagctttgcaaggttaggtctgttcagtttgggcagaagggcat 478 Query: 513 cccatacctgaacacctatgatggccgcaccatccgctaccc 554 ||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 479 cccgtacctgaacacgtatgacggccgcaccatccgctaccc 520
>gb|AF013487.1|AF013487 Zea mays ribosomal protein S4 type I (rps4) mRNA, complete cds Length = 1013 Score = 392 bits (198), Expect = e-106 Identities = 396/462 (85%) Strand = Plus / Plus Query: 93 cgagctcgcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtc 152 |||||| || ||||||||||| || |||||||||||| ||||||||||||||||||| Sbjct: 61 cgagcttgccaccatggctagaggattgaagaagcatttgaagaggctcaatgcccccaa 120 Query: 153 tcattggatgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctca 212 ||||||||||| ||||||||||| ||||||||||| ||||||||||| ||||| ||||| Sbjct: 121 gcattggatgctggacaagcttggcggagcttttgctcccaagccatcttctggacctca 180 Query: 213 caaggccagggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgctct 272 |||| | ||||| |||||||| |||||||||||| | |||||||| || || |||||||| Sbjct: 181 caagtctagggagtgcctgccactgatcctcatcatcaggaacaggctcaagtatgctct 240 Query: 273 cacgtaccgtgaagtgcaatctatccttatgcagcgtcatattatggttgatggaaaggt 332 || |||||||| || || ||||| ||||| || ||| | | |||||||| ||||| Sbjct: 241 tacataccgtgaggtcatttccatcctgatgcaacgccatgtacttgttgatggcaaggt 300 Query: 333 ccgcactgacaagacctaccctgctggtttcatggacattatttctattcccaagactgg 392 | | || |||||||||||||||||||| |||||||| | ||||| || |||||||| Sbjct: 301 caggacagacaagacctaccctgctgggttcatggatgtcatttccatccccaagaccaa 360 Query: 393 tgagaactacaggcttctgtatgacaccaagggccgcttccgccttcactctgtcaggga 452 ||||||||||||||| ||||| || |||||||||||||||||||||||| | ||||||| Sbjct: 361 tgagaactacaggctgctgtacgataccaagggccgcttccgccttcacccaatcaggga 420 Query: 453 tgaggatgctaagttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcat 512 ||||||||||||||||||||| |||||||| |||||||| ||||| || ||||||||||| Sbjct: 421 tgaggatgctaagttcaagctttgcaaggttaggtctgttcagtttgggcagaagggcat 480 Query: 513 cccatacctgaacacctatgatggccgcaccatccgctaccc 554 ||| || |||||||| ||||| |||||||||||||||||||| Sbjct: 481 cccttatctgaacacgtatgacggccgcaccatccgctaccc 522
>gb|BT016261.1| Zea mays clone Contig94 mRNA sequence Length = 1116 Score = 387 bits (195), Expect = e-104 Identities = 390/455 (85%) Strand = Plus / Plus Query: 100 gcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattgg 159 ||||||||||||||||| ||||||||||| |||||||||||||||| || |||||| Sbjct: 100 gcaaccatggctaggggattgaagaagcacttgaagaggctcaatgcgcccaagcattgg 159 Query: 160 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggcc 219 ||||| ||||||||||| ||||||||||| ||||||||||| ||||| ||||||||| || Sbjct: 160 atgctcgacaagcttggcggagcttttgctcccaagccatcttctggacctcacaagtcc 219 Query: 220 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtac 279 ||||| ||||| ||||||||||||||| | |||||||| || || |||||||| | ||| Sbjct: 220 agggagtgccttcctctgatcctcatcatcaggaacaggctcaagtatgctctgaactac 279 Query: 280 cgtgaagtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcact 339 ||||| || |||||||| ||||| || ||| | | |||||||| |||||| | ||| Sbjct: 280 cgtgaggtcatttctatcctgatgcaacgccatgtacttgttgatggcaaggtcaggact 339 Query: 340 gacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgagaac 399 |||||||||||||||||||| |||||||| | ||||| || || ||||| |||||| Sbjct: 340 gacaagacctaccctgctgggttcatggatgtcatttccatccctaagacaatggagaac 399 Query: 400 tacaggcttctgtatgacaccaagggccgcttccgccttcactctgtcagggatgaggat 459 |||||||| || ||||||||||||||||||||||| |||||| | |||||||||||||| Sbjct: 400 tacaggctgctttatgacaccaagggccgcttccgtcttcacccaatcagggatgaggat 459 Query: 460 gctaagttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatcccatac 519 || |||||||||||||||||||| ||||| || ||||| ||||||||||||||||| ||| Sbjct: 460 gccaagttcaagctctgcaaggtgaggtccgttcagtttggccagaagggcatcccctac 519 Query: 520 ctgaacacctatgatggccgcaccatccgctaccc 554 ||||||||||| || ||||| |||||||||||||| Sbjct: 520 ctgaacacctacgacggccgtaccatccgctaccc 554
>ref|NM_193994.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 768 Score = 337 bits (170), Expect = 2e-89 Identities = 314/362 (86%) Strand = Plus / Plus Query: 106 atggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgctt 165 ||||| ||||| |||||||||||||| |||||||||||||| || || |||||||| Sbjct: 1 atggcgaggggattgaagaagcatctcaagaggctcaatgcgcccaagcactggatgctc 60 Query: 166 gacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccagggaa 225 |||||||| || ||||||||||||||||||||||| ||||| ||||||||| |||||||| Sbjct: 61 gacaagctcggcggagcttttgcccccaagccatcgtctggacctcacaagtccagggaa 120 Query: 226 tgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtaccgtgaa 285 |||||||| |||||||||||| | |||||||| |||| ||||| || || |||||||| Sbjct: 121 tgcctgcccctgatcctcatcatcaggaacaggttgaagtatgcgctgacataccgtgag 180 Query: 286 gtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcactgacaag 345 || |||||||| |||||||| ||| | |||||||||| |||||| | ||||||||| Sbjct: 181 gttatctctatcctgatgcagcggcatgtcttggttgatgggaaggtcaggactgacaag 240 Query: 346 acctaccctgctggtttcatggacattatttctattcccaagactggtgagaactacagg 405 ||||||||||||||||||||||| | ||||| ||||| ||||||||||||||||||||| Sbjct: 241 acctaccctgctggtttcatggatgtgatttccattccaaagactggtgagaactacagg 300 Query: 406 cttctgtatgacaccaagggccgcttccgccttcactctgtcagggatgaggatgctaag 465 ||||| |||||||||||||| |||||||||||||| || |||| |||||||||||| ||| Sbjct: 301 cttctctatgacaccaagggtcgcttccgccttcagtccgtcaaggatgaggatgccaag 360 Query: 466 tt 467 || Sbjct: 361 tt 362 Score = 73.8 bits (37), Expect = 5e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 502 cagaagggcatcccatacctgaacacctatgatggccgcaccatccgctaccc 554 ||||||||||| || || ||||||||||||||||| ||||||||||||||||| Sbjct: 367 cagaagggcattccctatctgaacacctatgatggacgcaccatccgctaccc 419
>dbj|AK071862.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123J20, full insert sequence Length = 1162 Score = 319 bits (161), Expect = 5e-84 Identities = 380/453 (83%) Strand = Plus / Plus Query: 106 atggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgctt 165 ||||| |||||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct: 99 atggcgaggggtttgaagaagcatctgaagaggctcaatgcccccagccattggatgttt 158 Query: 166 gacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccagggaa 225 ||||||||||||||||| ||||| |||||||| || |||||||| ||||| || |||| Sbjct: 159 gacaagcttggtggagcatttgcacccaagccttcttctggtccccacaaagctcgggag 218 Query: 226 tgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtaccgtgaa 285 ||| ||||| ||||||| ||||| |||||||| |||| |||||||| || |||||||| Sbjct: 219 tgcttgcctttgatccttatcctcaggaacaggttgaagtatgctctgacctaccgtgag 278 Query: 286 gtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcactgacaag 345 || || ||| | |||||||| ||| |||||||||||||||||||| | ||||||||| Sbjct: 279 gttatttccatcttgatgcagcggcatgttatggttgatggaaaggtcaggactgacaag 338 Query: 346 acctaccctgctggtttcatggacattatttctattcccaagactggtgagaactacagg 405 || || || ||||| ||||||||| || | || ||| | |||||||| ||||| | | | Sbjct: 339 acttatccggctggattcatggacgttgtgtcaattgcaaagactggggagaatttccgc 398 Query: 406 cttctgtatgacaccaagggccgcttccgccttcactctgtcagggatgaggatgctaag 465 |||||||||||||||||||| |||||||| || ||| ||| ||||||||| |||||| Sbjct: 399 cttctgtatgacaccaagggtcgcttccgtctccacagcatcaaggatgaggacgctaag 458 Query: 466 ttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatcccatacctgaac 525 |||||||||||||||||| ||||||| ||||| || |||||||| || || | ||||||| Sbjct: 459 ttcaagctctgcaaggtccggtctgtacagtttggacagaagggtattcctttcctgaac 518 Query: 526 acctatgatggccgcaccatccgctacccagac 558 ||| | || || ||||| ||||||||||||||| Sbjct: 519 accaacgacgggcgcacgatccgctacccagac 551
>dbj|D25237.1|RICSS620B Oryza sativa SS620 mRNA for scar protein, partial cds Length = 293 Score = 274 bits (138), Expect = 3e-70 Identities = 232/262 (88%), Gaps = 1/262 (0%) Strand = Plus / Plus Query: 292 tctatccttatgcagcgtcatattatggttgatggaaaggtccgcactgacaagacctac 351 |||||||| |||||||| ||| | |||||||||| |||||| | ||||||||||||||| Sbjct: 32 tctatcctcatgcagcgccatgtcttggttgatggcaaggtcaggactgacaagacctac 91 Query: 352 cctgctggtttcatggacattatttctattcccaagactggtgagaactacaggcttctg 411 || |||||||||||||| | ||||| || |||||||||||||||||||||||||||||| Sbjct: 92 ccagctggtttcatggatgtcatttccatccccaagactggtgagaactacaggcttctg 151 Query: 412 tatgacaccaagggccgcttccgccttcactctgtcagggatgaggatgctaagttcaag 471 || ||||||||||| || ||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 152 tacgacaccaagggacgtttccgccttcagtctgtcaaggatgaggatgctaagttcaag 211 Query: 472 ctctgcaaggtcaggtctgtccagttcggccagaagggcatcccatacctgaac-accta 530 || |||||||| ||||||| ||||| ||||||||||| |||| ||||||||| || || Sbjct: 212 ctttgcaaggttcggtctgtgcagtttggccagaagggaatccgctacctgaacaactta 271 Query: 531 tgatggccgcaccatccgctac 552 |||||| ||||||||||||||| Sbjct: 272 tgatggtcgcaccatccgctac 293
>dbj|D21302.1|RICSS536 Oryza sativa SS536 mRNA for ribosomal protein S4, partial sequence Length = 347 Score = 272 bits (137), Expect = 1e-69 Identities = 223/254 (87%) Strand = Plus / Plus Query: 301 atgcagcgtcatattatggttgatggaaaggtccgcactgacaagacctaccctgctggt 360 |||||||| ||| | |||||||||| |||||| | ||||||||||||||||| |||||| Sbjct: 4 atgcagcgccatgtnttggttgatggcaaggtcaggactgacaagacctacccagctggt 63 Query: 361 ttcatggacattatttctattcccaagactggtgagaactacaggcttctgtatgacacc 420 |||||||| | ||||| || ||||||||||||||||||||||||||||| || |||||| Sbjct: 64 ttcatggatgtnatttccatccccaagactggtgagaactacaggcttctntacgacacc 123 Query: 421 aagggccgcttccgccttcactctgtcagggatgaggatgctaagttcaagctctgcaag 480 ||||| || |||| |||||| ||||||| |||||||||||||||||||||||| |||||| Sbjct: 124 aagggacgtttccnccttcagtctgtcaaggatgaggatgctaagttcaagctttgcaag 183 Query: 481 gtcaggtctgtccagttcggccagaagggcatcccatacctgaacacctatgatggccgc 540 || ||||||| ||||| |||||||||| ||||| |||||| ||||||||||||| ||| Sbjct: 184 gttcggtctgtgcagtttngccagaagggaatcccctacctgnacacctatgatggtcgc 243 Query: 541 accatccgctaccc 554 |||||||| ||||| Sbjct: 244 accatccgntaccc 257
>ref|XM_475130.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 738 Score = 260 bits (131), Expect = 4e-66 Identities = 332/399 (83%) Strand = Plus / Plus Query: 160 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggcc 219 ||||||||||||||||||||||| ||||| |||||||| || |||||||| ||||| || Sbjct: 1 atgcttgacaagcttggtggagcatttgcacccaagccttcttctggtccccacaaagct 60 Query: 220 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtac 279 |||| ||| ||||| ||||||| ||||| |||||||| |||| |||||||| || ||| Sbjct: 61 cgggagtgcttgcctttgatccttatcctcaggaacaggttgaagtatgctctgacctac 120 Query: 280 cgtgaagtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcact 339 ||||| || || ||| | |||||||| ||| |||||||||||||||||||| | ||| Sbjct: 121 cgtgaggttatttccatcttgatgcagcggcatgttatggttgatggaaaggtcaggact 180 Query: 340 gacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgagaac 399 |||||||| || || ||||| ||||||||| || | || ||| | |||||||| ||||| Sbjct: 181 gacaagacttatccggctggattcatggacgttgtgtcaattgcaaagactggggagaat 240 Query: 400 tacaggcttctgtatgacaccaagggccgcttccgccttcactctgtcagggatgaggat 459 | | | |||||||||||||||||||| |||||||| || ||| ||| ||||||||| Sbjct: 241 ttccgccttctgtatgacaccaagggtcgcttccgtctccacagcatcaaggatgaggac 300 Query: 460 gctaagttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatcccatac 519 |||||||||||||||||||||||| ||||||| ||||| || |||||||| || || | | Sbjct: 301 gctaagttcaagctctgcaaggtccggtctgtacagtttggacagaagggtattcctttc 360 Query: 520 ctgaacacctatgatggccgcaccatccgctacccagac 558 ||||||||| | || || ||||| ||||||||||||||| Sbjct: 361 ctgaacaccaacgacgggcgcacgatccgctacccagac 399
>gb|AF528526.1| Glycine max 40S ribosomal S4 protein mRNA, complete cds Length = 1054 Score = 256 bits (129), Expect = 7e-65 Identities = 372/453 (82%) Strand = Plus / Plus Query: 106 atggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgctt 165 ||||||||||| |||||||||||||| |||||||||||||| || |||||||||||| Sbjct: 98 atggctaggggattgaagaagcatctcaagaggctcaatgctcctaagcattggatgctt 157 Query: 166 gacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccagggaa 225 ||||| || ||||| || ||||| ||||| || |||||||| || ||||| | ||||| Sbjct: 158 gacaaactgggtggtgcatttgcgcccaaaccctcatctggaccacacaaatctagggag 217 Query: 226 tgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtaccgtgaa 285 ||||| || || || |||||||| | ||| | || || |||||||| || ||||||||| Sbjct: 218 tgccttcccctcatactcatcctacgaaaccggctaaagtatgctctgacttaccgtgaa 277 Query: 286 gtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcactgacaag 345 || |||| || |||||| | ||| || | ||||||||||| ||| | ||||||||| Sbjct: 278 gtcatcgctattctgatgcagagacatgttcttgttgatggaaaagtcaggactgacaag 337 Query: 346 acctaccctgctggtttcatggacattatttctattcccaagactggtgagaactacagg 405 || |||||||||||||||||||| || |||| || || || || |||||||| | | Sbjct: 338 acttaccctgctggtttcatggatgttgtttcaatcccaaaaaccaatgagaacttccgc 397 Query: 406 cttctgtatgacaccaagggccgcttccgccttcactctgtcagggatgaggatgctaag 465 || || |||||||| || ||||| ||||| || || |||||||||||||| || || ||| Sbjct: 398 ctgctctatgacactaaaggccgattccgtctccattctgtcagggatgatgaggcaaag 457 Query: 466 ttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatcccatacctgaac 525 ||||||||||||||||| ||||| || ||||| |||||||| || ||||||||||||||| Sbjct: 458 ttcaagctctgcaaggttaggtcagtgcagtttggccagaaaggtatcccatacctgaac 517 Query: 526 acctatgatggccgcaccatccgctacccagac 558 ||||||||||| ||||||||||| ||||||||| Sbjct: 518 acctatgatggtcgcaccatccgttacccagac 550
>dbj|AB232685.1| Panax ginseng mRNA for ribosomal protein S4, complete cds Length = 1105 Score = 228 bits (115), Expect = 2e-56 Identities = 373/459 (81%) Strand = Plus / Plus Query: 100 gcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattgg 159 |||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||| Sbjct: 82 gcaaccatggctagaggtttgaagaagcatttgaagaggctcaatgcccctaagcattgg 141 Query: 160 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggcc 219 ||||| || || |||||||| || ||||| |||||||| |||||||| || || || || Sbjct: 142 atgctcgataaacttggtggtgcatttgctcccaagccttcatctggaccccataaatcc 201 Query: 220 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtac 279 ||||||||||||||| |||| || || || | ||||| ||||| |||||||| || ||| Sbjct: 202 agggaatgcctgcctttgattcttattttgcgaaacaggctgaagtatgctctaacttac 261 Query: 280 cgtgaagtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcact 339 |||||||| ||||| ||| | ||||| || ||| || | |||||||| ||||| | || Sbjct: 262 cgtgaagtccaatccatcttgatgcaacgacatgttcttgttgatgggaaggttaggacg 321 Query: 340 gacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgagaac 399 || |||||||| || |||||||||||||| || | || |||||||||||| |||||| Sbjct: 322 gataagacctatccagctggtttcatggatgttgtatcaattcccaagactaatgagaat 381 Query: 400 tacaggcttctgtatgacaccaagggccgcttccgccttcactctgtcagggatgaggat 459 | | | || || |||||||| ||||| | |||||||| ||||| |||||||||||||| Sbjct: 382 ttccgtctcctctatgacacaaagggtagattccgcctacactcggtcagggatgaggag 441 Query: 460 gctaagttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatcccatac 519 || ||||| ||| | ||||| || ||||| || |||||||| ||||| ||||| || ||| Sbjct: 442 gcaaagtttaagttgtgcaaagttaggtcagttcagttcggtcagaaaggcattccgtac 501 Query: 520 ctgaacacctatgatggccgcaccatccgctacccagac 558 | || ||||||||||| || || ||||| || |||||| Sbjct: 502 atcaatacctatgatgggcgtactatccgttatccagac 540
>gb|AY085205.1| Arabidopsis thaliana clone 13813 mRNA, complete sequence Length = 1011 Score = 228 bits (115), Expect = 2e-56 Identities = 370/455 (81%) Strand = Plus / Plus Query: 100 gcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattgg 159 |||| |||||| || || |||||||||||||| ||||||||||||||||| |||||| Sbjct: 22 gcaaacatggcaagaggattgaagaagcatctaaagaggctcaatgcccctaagcattgg 81 Query: 160 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggcc 219 ||||||||||| |||||||| || || || ||||| ||||| ||||| ||||||||| | Sbjct: 82 atgcttgacaaacttggtggtgccttcgctcccaaaccatcttctggacctcacaagtcg 141 Query: 220 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtac 279 ||||| || || ||||| |||| ||| | |||||||| |||| |||||| | || ||| Sbjct: 142 agggagtgtcttcctcttgtcctgatcatcaggaacaggttgaagtatgctttgacttac 201 Query: 280 cgtgaagtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcact 339 |||||||| |||||| | ||||| | ||||| |||||||| || ||| | ||| Sbjct: 202 cgtgaagttatctctatcttgatgcaaaggcatatccaagttgatggcaaagtcaggact 261 Query: 340 gacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgagaac 399 |||||||| |||||||||||||||||||| || | || || |||||||| ||||||| Sbjct: 262 gacaagacttaccctgctggtttcatggatgttgtatccatccccaagaccaatgagaac 321 Query: 400 tacaggcttctgtatgacaccaagggccgcttccgccttcactctgtcagggatgaggat 459 | | | ||||| || ||||||||||| || ||||| || ||||| ||| ||||||||| Sbjct: 322 ttccgtcttctctacgacaccaagggacgtttccgtctccactccatcaaggatgaggaa 381 Query: 460 gctaagttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatcccatac 519 || ||||||||||| |||||||| || ||| ||||||| || |||||||| || |||||| Sbjct: 382 gcaaagttcaagctttgcaaggttagatctatccagtttggtcagaagggaattccatac 441 Query: 520 ctgaacacctatgatggccgcaccatccgctaccc 554 |||||||| |||||||| ||||||||||| ||||| Sbjct: 442 ctgaacacttatgatggtcgcaccatccgttaccc 476
>ref|NM_120791.2| Arabidopsis thaliana structural constituent of ribosome AT5G07090 transcript variant AT5G07090.1 mRNA, complete cds Length = 1088 Score = 220 bits (111), Expect = 4e-54 Identities = 369/455 (81%) Strand = Plus / Plus Query: 100 gcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattgg 159 |||| |||||| || || |||||||||||||| |||||||||||||| || |||||| Sbjct: 22 gcaaacatggcaagaggattgaagaagcatctaaagaggctcaatgctcctaagcattgg 81 Query: 160 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggcc 219 ||||||||||| |||||||| || || || ||||| ||||| ||||| ||||||||| | Sbjct: 82 atgcttgacaaacttggtggtgccttcgctcccaaaccatcttctggacctcacaagtcg 141 Query: 220 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtac 279 ||||| || || ||||| |||| ||| | |||||||| |||| |||||| | || ||| Sbjct: 142 agggagtgtcttcctcttgtcctgatcatcaggaacaggttgaagtatgctttgacttac 201 Query: 280 cgtgaagtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcact 339 |||||||| |||||| | ||||| | ||||| |||||||| || ||| | ||| Sbjct: 202 cgtgaagttatctctatcttgatgcaaaggcatatccaagttgatggcaaagtcaggact 261 Query: 340 gacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgagaac 399 |||||||| |||||||||||||||||||| || | || || |||||||| ||||||| Sbjct: 262 gacaagacttaccctgctggtttcatggatgttgtatccatccccaagaccaatgagaac 321 Query: 400 tacaggcttctgtatgacaccaagggccgcttccgccttcactctgtcagggatgaggat 459 | | | ||||| || ||||||||||| || ||||| || ||||| ||| ||||||||| Sbjct: 322 ttccgtcttctctacgacaccaagggacgtttccgtctccactccatcaaggatgaggaa 381 Query: 460 gctaagttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatcccatac 519 || ||||||||||| |||||||| || ||| ||||||| || |||||||| || |||||| Sbjct: 382 gcaaagttcaagctttgcaaggttagatctatccagtttggtcagaagggaattccatac 441 Query: 520 ctgaacacctatgatggccgcaccatccgctaccc 554 |||||||| |||||||| ||||||||||| ||||| Sbjct: 442 ctgaacacttatgatggtcgcaccatccgttaccc 476
>gb|AY050933.1| Arabidopsis thaliana putative 40S ribosomal protein S4 (At5g07090) mRNA, complete cds Length = 1059 Score = 220 bits (111), Expect = 4e-54 Identities = 369/455 (81%) Strand = Plus / Plus Query: 100 gcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattgg 159 |||| |||||| || || |||||||||||||| |||||||||||||| || |||||| Sbjct: 19 gcaaacatggcaagaggattgaagaagcatctaaagaggctcaatgctcctaagcattgg 78 Query: 160 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggcc 219 ||||||||||| |||||||| || || || ||||| ||||| ||||| ||||||||| | Sbjct: 79 atgcttgacaaacttggtggtgccttcgctcccaaaccatcttctggacctcacaagtcg 138 Query: 220 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtac 279 ||||| || || ||||| |||| ||| | |||||||| |||| |||||| | || ||| Sbjct: 139 agggagtgtcttcctcttgtcctgatcatcaggaacaggttgaagtatgctttgacttac 198 Query: 280 cgtgaagtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcact 339 |||||||| |||||| | ||||| | ||||| |||||||| || ||| | ||| Sbjct: 199 cgtgaagttatctctatcttgatgcaaaggcatatccaagttgatggcaaagtcaggact 258 Query: 340 gacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgagaac 399 |||||||| |||||||||||||||||||| || | || || |||||||| ||||||| Sbjct: 259 gacaagacttaccctgctggtttcatggatgttgtatccatccccaagaccaatgagaac 318 Query: 400 tacaggcttctgtatgacaccaagggccgcttccgccttcactctgtcagggatgaggat 459 | | | ||||| || ||||||||||| || ||||| || ||||| ||| ||||||||| Sbjct: 319 ttccgtcttctctacgacaccaagggacgtttccgtctccactccatcaaggatgaggaa 378 Query: 460 gctaagttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatcccatac 519 || ||||||||||| |||||||| || ||| ||||||| || |||||||| || |||||| Sbjct: 379 gcaaagttcaagctttgcaaggttagatctatccagtttggtcagaagggaattccatac 438 Query: 520 ctgaacacctatgatggccgcaccatccgctaccc 554 |||||||| |||||||| ||||||||||| ||||| Sbjct: 439 ctgaacacttatgatggtcgcaccatccgttaccc 473
>gb|AY070769.1| Arabidopsis thaliana AT5g07090/T28J14_30 mRNA, complete cds Length = 1008 Score = 220 bits (111), Expect = 4e-54 Identities = 369/455 (81%) Strand = Plus / Plus Query: 100 gcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattgg 159 |||| |||||| || || |||||||||||||| |||||||||||||| || |||||| Sbjct: 19 gcaaacatggcaagaggattgaagaagcatctaaagaggctcaatgctcctaagcattgg 78 Query: 160 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggcc 219 ||||||||||| |||||||| || || || ||||| ||||| ||||| ||||||||| | Sbjct: 79 atgcttgacaaacttggtggtgccttcgctcccaaaccatcttctggacctcacaagtcg 138 Query: 220 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtac 279 ||||| || || ||||| |||| ||| | |||||||| |||| |||||| | || ||| Sbjct: 139 agggagtgtcttcctcttgtcctgatcatcaggaacaggttgaagtatgctttgacttac 198 Query: 280 cgtgaagtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcact 339 |||||||| |||||| | ||||| | ||||| |||||||| || ||| | ||| Sbjct: 199 cgtgaagttatctctatcttgatgcaaaggcatatccaagttgatggcaaagtcaggact 258 Query: 340 gacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgagaac 399 |||||||| |||||||||||||||||||| || | || || |||||||| ||||||| Sbjct: 259 gacaagacttaccctgctggtttcatggatgttgtatccatccccaagaccaatgagaac 318 Query: 400 tacaggcttctgtatgacaccaagggccgcttccgccttcactctgtcagggatgaggat 459 | | | ||||| || ||||||||||| || ||||| || ||||| ||| ||||||||| Sbjct: 319 ttccgtcttctctacgacaccaagggacgtttccgtctccactccatcaaggatgaggaa 378 Query: 460 gctaagttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatcccatac 519 || ||||||||||| |||||||| || ||| ||||||| || |||||||| || |||||| Sbjct: 379 gcaaagttcaagctttgcaaggttagatctatccagtttggtcagaagggaattccatac 438 Query: 520 ctgaacacctatgatggccgcaccatccgctaccc 554 |||||||| |||||||| ||||||||||| ||||| Sbjct: 439 ctgaacacttatgatggtcgcaccatccgttaccc 473
>ref|NM_001036769.1| Arabidopsis thaliana structural constituent of ribosome AT5G07090 transcript variant AT5G07090.2 mRNA, complete cds Length = 1174 Score = 216 bits (109), Expect = 6e-53 Identities = 355/437 (81%) Strand = Plus / Plus Query: 118 ttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggt 177 |||||||||||||| |||||||||||||| || ||||||||||||||||| |||||| Sbjct: 125 ttgaagaagcatctaaagaggctcaatgctcctaagcattggatgcttgacaaacttggt 184 Query: 178 ggagcttttgcccccaagccatcatctggtcctcacaaggccagggaatgcctgcctctg 237 || || || || ||||| ||||| ||||| ||||||||| | ||||| || || ||||| Sbjct: 185 ggtgccttcgctcccaaaccatcttctggacctcacaagtcgagggagtgtcttcctctt 244 Query: 238 atcctcatcctgaggaacagactgaaatatgctctcacgtaccgtgaagtgcaatctatc 297 |||| ||| | |||||||| |||| |||||| | || ||||||||||| |||||| Sbjct: 245 gtcctgatcatcaggaacaggttgaagtatgctttgacttaccgtgaagttatctctatc 304 Query: 298 cttatgcagcgtcatattatggttgatggaaaggtccgcactgacaagacctaccctgct 357 | ||||| | ||||| |||||||| || ||| | ||||||||||| ||||||||| Sbjct: 305 ttgatgcaaaggcatatccaagttgatggcaaagtcaggactgacaagacttaccctgct 364 Query: 358 ggtttcatggacattatttctattcccaagactggtgagaactacaggcttctgtatgac 417 ||||||||||| || | || || |||||||| |||||||| | | ||||| || ||| Sbjct: 365 ggtttcatggatgttgtatccatccccaagaccaatgagaacttccgtcttctctacgac 424 Query: 418 accaagggccgcttccgccttcactctgtcagggatgaggatgctaagttcaagctctgc 477 |||||||| || ||||| || ||||| ||| ||||||||| || ||||||||||| ||| Sbjct: 425 accaagggacgtttccgtctccactccatcaaggatgaggaagcaaagttcaagctttgc 484 Query: 478 aaggtcaggtctgtccagttcggccagaagggcatcccatacctgaacacctatgatggc 537 ||||| || ||| ||||||| || |||||||| || |||||||||||||| |||||||| Sbjct: 485 aaggttagatctatccagtttggtcagaagggaattccatacctgaacacttatgatggt 544 Query: 538 cgcaccatccgctaccc 554 ||||||||||| ||||| Sbjct: 545 cgcaccatccgttaccc 561
>gb|AY079417.1| Arabidopsis thaliana putative 40S ribosomal protein S4 (At5g07090) mRNA, complete cds Length = 820 Score = 216 bits (109), Expect = 6e-53 Identities = 355/437 (81%) Strand = Plus / Plus Query: 118 ttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggt 177 |||||||||||||| |||||||||||||| || ||||||||||||||||| |||||| Sbjct: 13 ttgaagaagcatctaaagaggctcaatgctcctaagcattggatgcttgacaaacttggt 72 Query: 178 ggagcttttgcccccaagccatcatctggtcctcacaaggccagggaatgcctgcctctg 237 || || || || ||||| ||||| ||||| ||||||||| | ||||| || || ||||| Sbjct: 73 ggtgccttcgctcccaaaccatcttctggacctcacaagtcgagggagtgtcttcctctt 132 Query: 238 atcctcatcctgaggaacagactgaaatatgctctcacgtaccgtgaagtgcaatctatc 297 |||| ||| | |||||||| |||| |||||| | || ||||||||||| |||||| Sbjct: 133 gtcctgatcatcaggaacaggttgaagtatgctttgacttaccgtgaagttatctctatc 192 Query: 298 cttatgcagcgtcatattatggttgatggaaaggtccgcactgacaagacctaccctgct 357 | ||||| | ||||| |||||||| || ||| | ||||||||||| ||||||||| Sbjct: 193 ttgatgcaaaggcatatccaagttgatggcaaagtcaggactgacaagacttaccctgct 252 Query: 358 ggtttcatggacattatttctattcccaagactggtgagaactacaggcttctgtatgac 417 ||||||||||| || | || || |||||||| |||||||| | | ||||| || ||| Sbjct: 253 ggtttcatggatgttgtatccatccccaagaccaatgagaacttccgtcttctctacgac 312 Query: 418 accaagggccgcttccgccttcactctgtcagggatgaggatgctaagttcaagctctgc 477 |||||||| || ||||| || ||||| ||| ||||||||| || ||||||||||| ||| Sbjct: 313 accaagggacgtttccgtctccactccatcaaggatgaggaagcaaagttcaagctttgc 372 Query: 478 aaggtcaggtctgtccagttcggccagaagggcatcccatacctgaacacctatgatggc 537 ||||| || ||| ||||||| || |||||||| || |||||||||||||| |||||||| Sbjct: 373 aaggttagatctatccagtttggtcagaagggaattccatacctgaacacttatgatggt 432 Query: 538 cgcaccatccgctaccc 554 ||||||||||| ||||| Sbjct: 433 cgcaccatccgttaccc 449
>gb|AY093715.1| Arabidopsis thaliana AT5g07090/T28J14_30 mRNA, complete cds Length = 789 Score = 216 bits (109), Expect = 6e-53 Identities = 355/437 (81%) Strand = Plus / Plus Query: 118 ttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggt 177 |||||||||||||| |||||||||||||| || ||||||||||||||||| |||||| Sbjct: 13 ttgaagaagcatctaaagaggctcaatgctcctaagcattggatgcttgacaaacttggt 72 Query: 178 ggagcttttgcccccaagccatcatctggtcctcacaaggccagggaatgcctgcctctg 237 || || || || ||||| ||||| ||||| ||||||||| | ||||| || || ||||| Sbjct: 73 ggtgccttcgctcccaaaccatcttctggacctcacaagtcgagggagtgtcttcctctt 132 Query: 238 atcctcatcctgaggaacagactgaaatatgctctcacgtaccgtgaagtgcaatctatc 297 |||| ||| | |||||||| |||| |||||| | || ||||||||||| |||||| Sbjct: 133 gtcctgatcatcaggaacaggttgaagtatgctttgacttaccgtgaagttatctctatc 192 Query: 298 cttatgcagcgtcatattatggttgatggaaaggtccgcactgacaagacctaccctgct 357 | ||||| | ||||| |||||||| || ||| | ||||||||||| ||||||||| Sbjct: 193 ttgatgcaaaggcatatccaagttgatggcaaagtcaggactgacaagacttaccctgct 252 Query: 358 ggtttcatggacattatttctattcccaagactggtgagaactacaggcttctgtatgac 417 ||||||||||| || | || || |||||||| |||||||| | | ||||| || ||| Sbjct: 253 ggtttcatggatgttgtatccatccccaagaccaatgagaacttccgtcttctctacgac 312 Query: 418 accaagggccgcttccgccttcactctgtcagggatgaggatgctaagttcaagctctgc 477 |||||||| || ||||| || ||||| ||| ||||||||| || ||||||||||| ||| Sbjct: 313 accaagggacgtttccgtctccactccatcaaggatgaggaagcaaagttcaagctttgc 372 Query: 478 aaggtcaggtctgtccagttcggccagaagggcatcccatacctgaacacctatgatggc 537 ||||| || ||| ||||||| || |||||||| || |||||||||||||| |||||||| Sbjct: 373 aaggttagatctatccagtttggtcagaagggaattccatacctgaacacttatgatggt 432 Query: 538 cgcaccatccgctaccc 554 ||||||||||| ||||| Sbjct: 433 cgcaccatccgttaccc 449
>emb|X76651.1|STRPS4 S.tuberosum (Desiree) mRNA for ribosomal protein S4 Length = 966 Score = 212 bits (107), Expect = 9e-52 Identities = 350/431 (81%) Strand = Plus / Plus Query: 106 atggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgctt 165 |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 50 atggctagaggtttgaagaagcatctgaagaggctcaatgccccaaagcattggatgctt 109 Query: 166 gacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccagggaa 225 || || ||||||||||| ||||||||||||||||| ||||| || ||||| | ||||| Sbjct: 110 gataaacttggtggagcatttgcccccaagccatcctctgggccacacaaatcaagggag 169 Query: 226 tgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtaccgtgaa 285 ||| |||| || || | ||| || | ||||| |||| ||||||||||| ||||| || Sbjct: 170 tgcttgccattggtcattatcatgcgaaacaggttgaagtatgctctcacataccgagag 229 Query: 286 gtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcactgacaag 345 ||| || || || ||||| || || ||||||||||||| || || | || || ||| Sbjct: 230 gtgatctcaattctgatgcaacgacaagttatggttgatgggaaagttaggacagataag 289 Query: 346 acctaccctgctggtttcatggacattatttctattcccaagactggtgagaactacagg 405 || || ||||||||||||||||| | |||| ||||| |||||| |||||||| | | Sbjct: 290 acatatcctgctggtttcatggatgtcgtttcaattccgaagactaatgagaacttccgt 349 Query: 406 cttctgtatgacaccaagggccgcttccgccttcactctgtcagggatgaggatgctaag 465 || || |||||||| |||||||| ||||| |||||||| ||||||| ||||| | ||| Sbjct: 350 ctcctttatgacactaagggccgattccgtcttcactcgctcagggacgaggaatccaag 409 Query: 466 ttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatcccatacctgaac 525 || ||||| ||||||||| | ||||| ||||| || |||||||| ||||||||||||||| Sbjct: 410 tttaagctttgcaaggtccgctctgtgcagtttggtcagaaggggatcccatacctgaac 469 Query: 526 acctatgatgg 536 || || ||||| Sbjct: 470 acttacgatgg 480
>ref|NM_125228.3| Arabidopsis thaliana structural constituent of ribosome AT5G58420 mRNA, complete cds Length = 1080 Score = 210 bits (106), Expect = 4e-51 Identities = 364/450 (80%) Strand = Plus / Plus Query: 105 catggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgct 164 |||||| ||||||||||||||||||||||||||||| ||||| || ||||||||||| Sbjct: 93 catggcgaggggtttgaagaagcatctgaagaggcttaatgcgcctaagcattggatgct 152 Query: 165 tgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccaggga 224 |||||| |||||||| || |||||||| ||||| || ||||| || || ||| | ||||| Sbjct: 153 tgacaaacttggtggtgcatttgccccaaagccgtcttctggaccacataagtcaaggga 212 Query: 225 atgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtaccgtga 284 ||||| || || |||| ||| | |||||||| |||| |||||||| || |||||||| Sbjct: 213 gtgccttcccctcgtccttatcatcaggaacaggttgaagtatgctcttacctaccgtga 272 Query: 285 agtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcactgacaa 344 |||| || ||| | ||||| | ||||| |||||||| || ||| | || ||||| Sbjct: 273 agtgatttcaatcttgatgcaaaggcatatccaagttgatgggaaagtcaggacggacaa 332 Query: 345 gacctaccctgctggtttcatggacattatttctattcccaagactggtgagaactacag 404 |||||||||||||||||||||||| || | ||||| |||||||| |||||||| | | Sbjct: 333 gacctaccctgctggtttcatggatgttgtgtctatccccaagaccaatgagaacttccg 392 Query: 405 gcttctgtatgacaccaagggccgcttccgccttcactctgtcagggatgaggatgctaa 464 ||||| ||||| |||||||| || ||||| || ||||| ||| ||||||||| || || Sbjct: 393 tcttctctatgataccaagggacgtttccgtctccactccatcaaggatgaggaagcaaa 452 Query: 465 gttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatcccatacctgaa 524 |||||| || |||||||| | ||| ||||||| || ||||| ||||| || |||||||| Sbjct: 453 gttcaaactttgcaaggttcgatctatccagtttggacagaaaggcattccttacctgaa 512 Query: 525 cacctatgatggccgcaccatccgctaccc 554 ||| || ||||| ||||||||||| ||||| Sbjct: 513 cacttacgatggtcgcaccatccgttaccc 542
>gb|AF428285.1|AF428285 Arabidopsis thaliana AT5g58420/mqj2_10 mRNA, complete cds Length = 1005 Score = 210 bits (106), Expect = 4e-51 Identities = 364/450 (80%) Strand = Plus / Plus Query: 105 catggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgct 164 |||||| ||||||||||||||||||||||||||||| ||||| || ||||||||||| Sbjct: 84 catggcgaggggtttgaagaagcatctgaagaggcttaatgcgcctaagcattggatgct 143 Query: 165 tgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccaggga 224 |||||| |||||||| || |||||||| ||||| || ||||| || || ||| | ||||| Sbjct: 144 tgacaaacttggtggtgcatttgccccaaagccgtcttctggaccacataagtcaaggga 203 Query: 225 atgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtaccgtga 284 ||||| || || |||| ||| | |||||||| |||| |||||||| || |||||||| Sbjct: 204 gtgccttcccctcgtccttatcatcaggaacaggttgaagtatgctcttacctaccgtga 263 Query: 285 agtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcactgacaa 344 |||| || ||| | ||||| | ||||| |||||||| || ||| | || ||||| Sbjct: 264 agtgatttcaatcttgatgcaaaggcatatccaagttgatgggaaagtcaggacggacaa 323 Query: 345 gacctaccctgctggtttcatggacattatttctattcccaagactggtgagaactacag 404 |||||||||||||||||||||||| || | ||||| |||||||| |||||||| | | Sbjct: 324 gacctaccctgctggtttcatggatgttgtgtctatccccaagaccaatgagaacttccg 383 Query: 405 gcttctgtatgacaccaagggccgcttccgccttcactctgtcagggatgaggatgctaa 464 ||||| ||||| |||||||| || ||||| || ||||| ||| ||||||||| || || Sbjct: 384 tcttctctatgataccaagggacgtttccgtctccactccatcaaggatgaggaagcaaa 443 Query: 465 gttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatcccatacctgaa 524 |||||| || |||||||| | ||| ||||||| || ||||| ||||| || |||||||| Sbjct: 444 gttcaaactttgcaaggttcgatctatccagtttggacagaaaggcattccttacctgaa 503 Query: 525 cacctatgatggccgcaccatccgctaccc 554 ||| || ||||| ||||||||||| ||||| Sbjct: 504 cacttacgatggtcgcaccatccgttaccc 533
>gb|AY086206.1| Arabidopsis thaliana clone 22434 mRNA, complete sequence Length = 1010 Score = 210 bits (106), Expect = 4e-51 Identities = 364/450 (80%) Strand = Plus / Plus Query: 105 catggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgct 164 |||||| ||||||||||||||||||||||||||||| ||||| || ||||||||||| Sbjct: 88 catggcgaggggtttgaagaagcatctgaagaggcttaatgcgcctaagcattggatgct 147 Query: 165 tgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccaggga 224 |||||| |||||||| || |||||||| ||||| || ||||| || || ||| | ||||| Sbjct: 148 tgacaaacttggtggtgcatttgccccaaagccgtcttctggaccacataagtcaaggga 207 Query: 225 atgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtaccgtga 284 ||||| || || |||| ||| | |||||||| |||| |||||||| || |||||||| Sbjct: 208 gtgccttcccctcgtccttatcatcaggaacaggttgaagtatgctcttacctaccgtga 267 Query: 285 agtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcactgacaa 344 |||| || ||| | ||||| | ||||| |||||||| || ||| | || ||||| Sbjct: 268 agtgatttcaatcttgatgcaaaggcatatccaagttgatgggaaagtcaggacggacaa 327 Query: 345 gacctaccctgctggtttcatggacattatttctattcccaagactggtgagaactacag 404 |||||||||||||||||||||||| || | ||||| |||||||| |||||||| | | Sbjct: 328 gacctaccctgctggtttcatggatgttgtgtctatccccaagaccaatgagaacttccg 387 Query: 405 gcttctgtatgacaccaagggccgcttccgccttcactctgtcagggatgaggatgctaa 464 ||||| ||||| |||||||| || ||||| || ||||| ||| ||||||||| || || Sbjct: 388 tcttctctatgataccaagggacgtttccgtctccactccatcaaggatgaggaagcaaa 447 Query: 465 gttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatcccatacctgaa 524 |||||| || |||||||| | ||| ||||||| || ||||| ||||| || |||||||| Sbjct: 448 gttcaaactttgcaaggttcgatctatccagtttggacagaaaggcattccttacctgaa 507 Query: 525 cacctatgatggccgcaccatccgctaccc 554 ||| || ||||| ||||||||||| ||||| Sbjct: 508 cacttacgatggtcgcaccatccgttaccc 537
>emb|BX832664.1|CNS09ZT5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH87ZG07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 976 Score = 208 bits (105), Expect = 1e-50 Identities = 354/437 (81%) Strand = Plus / Plus Query: 118 ttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggt 177 |||||||||||||| |||||||||||||| || ||||||||||||||||| |||||| Sbjct: 7 ttgaagaagcatctaaagaggctcaatgctcctaagcattggatgcttgacaaacttggt 66 Query: 178 ggagcttttgcccccaagccatcatctggtcctcacaaggccagggaatgcctgcctctg 237 || || || || ||||| ||||| ||||| ||||||||| | ||||| | || ||||| Sbjct: 67 ggtgccttcgctcccaaaccatcttctggacctcacaagtcgagggagtttcttcctctt 126 Query: 238 atcctcatcctgaggaacagactgaaatatgctctcacgtaccgtgaagtgcaatctatc 297 |||| ||| | |||||||| |||| |||||| | || ||||||||||| |||||| Sbjct: 127 gtcctgatcatcaggaacaggttgaagtatgctttgacttaccgtgaagttatctctatc 186 Query: 298 cttatgcagcgtcatattatggttgatggaaaggtccgcactgacaagacctaccctgct 357 | ||||| | ||||| |||||||| || ||| | ||||||||||| ||||||||| Sbjct: 187 ttgatgcaaaggcatatccaagttgatggcaaagtcaggactgacaagacttaccctgct 246 Query: 358 ggtttcatggacattatttctattcccaagactggtgagaactacaggcttctgtatgac 417 ||||||||||| || | || || |||||||| |||||||| | | ||||| || ||| Sbjct: 247 ggtttcatggatgttgtatccatccccaagaccaatgagaacttccgtcttctctacgac 306 Query: 418 accaagggccgcttccgccttcactctgtcagggatgaggatgctaagttcaagctctgc 477 |||||||| || ||||| || ||||| ||| ||||||||| || ||||||||||| ||| Sbjct: 307 accaagggacgtttccgtctccactccatcaaggatgaggaagcaaagttcaagctttgc 366 Query: 478 aaggtcaggtctgtccagttcggccagaagggcatcccatacctgaacacctatgatggc 537 ||||| || ||| ||||||| || |||||||| || |||||||||||||| |||||||| Sbjct: 367 aaggttagatctatccagtttggtcagaagggaattccatacctgaacacttatgatggt 426 Query: 538 cgcaccatccgctaccc 554 ||||||||||| ||||| Sbjct: 427 cgcaccatccgttaccc 443
>emb|BX832452.1|CNS09ZTE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH74ZD04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 942 Score = 208 bits (105), Expect = 1e-50 Identities = 354/437 (81%) Strand = Plus / Plus Query: 118 ttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggt 177 |||||||||||||| |||||||||||||| || ||||||||||||||||| |||||| Sbjct: 11 ttgaagaagcatctaaagaggctcaatgctcctaagcattggatgcttgacaaacttggt 70 Query: 178 ggagcttttgcccccaagccatcatctggtcctcacaaggccagggaatgcctgcctctg 237 || || || || ||||| ||||| ||||| ||||||||| | ||||| | || ||||| Sbjct: 71 ggtgccttcgctcccaaaccatcttctggacctcacaagtcgagggagtttcttcctctt 130 Query: 238 atcctcatcctgaggaacagactgaaatatgctctcacgtaccgtgaagtgcaatctatc 297 |||| ||| | |||||||| |||| |||||| | || ||||||||||| |||||| Sbjct: 131 gtcctgatcatcaggaacaggttgaagtatgctttgacttaccgtgaagttatctctatc 190 Query: 298 cttatgcagcgtcatattatggttgatggaaaggtccgcactgacaagacctaccctgct 357 | ||||| | ||||| |||||||| || ||| | ||||||||||| ||||||||| Sbjct: 191 ttgatgcaaaggcatatccaagttgatggcaaagtcaggactgacaagacttaccctgct 250 Query: 358 ggtttcatggacattatttctattcccaagactggtgagaactacaggcttctgtatgac 417 ||||||||||| || | || || |||||||| |||||||| | | ||||| || ||| Sbjct: 251 ggtttcatggatgttgtatccatccccaagaccaatgagaacttccgtcttctctacgac 310 Query: 418 accaagggccgcttccgccttcactctgtcagggatgaggatgctaagttcaagctctgc 477 |||||||| || ||||| || ||||| ||| ||||||||| || ||||||||||| ||| Sbjct: 311 accaagggacgtttccgtctccactccatcaaggatgaggaagcaaagttcaagctttgc 370 Query: 478 aaggtcaggtctgtccagttcggccagaagggcatcccatacctgaacacctatgatggc 537 ||||| || ||| ||||||| || |||||||| || |||||||||||||| |||||||| Sbjct: 371 aaggttagatctatccagtttggtcagaagggaattccatacctgaacacttatgatggt 430 Query: 538 cgcaccatccgctaccc 554 ||||||||||| ||||| Sbjct: 431 cgcaccatccgttaccc 447
>emb|BX832256.1|CNS09ZVR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH61ZC05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 952 Score = 208 bits (105), Expect = 1e-50 Identities = 354/437 (81%) Strand = Plus / Plus Query: 118 ttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggt 177 |||||||||||||| |||||||||||||| || ||||||||||||||||| |||||| Sbjct: 2 ttgaagaagcatctaaagaggctcaatgctcctaagcattggatgcttgacaaacttggt 61 Query: 178 ggagcttttgcccccaagccatcatctggtcctcacaaggccagggaatgcctgcctctg 237 || || || || ||||| ||||| ||||| ||||||||| | ||||| | || ||||| Sbjct: 62 ggtgccttcgctcccaaaccatcttctggacctcacaagtcgagggagtatcttcctctt 121 Query: 238 atcctcatcctgaggaacagactgaaatatgctctcacgtaccgtgaagtgcaatctatc 297 |||| ||| | |||||||| |||| |||||| | || ||||||||||| |||||| Sbjct: 122 gtcctgatcatcaggaacaggttgaagtatgctttgacttaccgtgaagttatctctatc 181 Query: 298 cttatgcagcgtcatattatggttgatggaaaggtccgcactgacaagacctaccctgct 357 | ||||| | ||||| |||||||| || ||| | ||||||||||| ||||||||| Sbjct: 182 ttgatgcaaaggcatatccaagttgatggcaaagtcaggactgacaagacttaccctgct 241 Query: 358 ggtttcatggacattatttctattcccaagactggtgagaactacaggcttctgtatgac 417 ||||||||||| || | || || |||||||| |||||||| | | ||||| || ||| Sbjct: 242 ggtttcatggatgttgtatccatccccaagaccaatgagaacttccgtcttctctacgac 301 Query: 418 accaagggccgcttccgccttcactctgtcagggatgaggatgctaagttcaagctctgc 477 |||||||| || ||||| || ||||| ||| ||||||||| || ||||||||||| ||| Sbjct: 302 accaagggacgtttccgtctccactccatcaaggatgaggaagcaaagttcaagctttgc 361 Query: 478 aaggtcaggtctgtccagttcggccagaagggcatcccatacctgaacacctatgatggc 537 ||||| || ||| ||||||| || |||||||| || |||||||||||||| |||||||| Sbjct: 362 aaggttagatctatccagtttggtcagaagggaattccatacctgaacacttatgatggt 421 Query: 538 cgcaccatccgctaccc 554 ||||||||||| ||||| Sbjct: 422 cgcaccatccgttaccc 438
>emb|X79300.1|GHRS4E G.hirsutum (DPL 62) mRNA for ribosomal protein small subunit 4e Length = 1090 Score = 206 bits (104), Expect = 6e-50 Identities = 226/264 (85%), Gaps = 2/264 (0%) Strand = Plus / Plus Query: 106 atggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgctt 165 |||||||| || |||||||| ||| ||||||||||||||||||| |||||||||||| Sbjct: 56 atggctagagggttgaagaaacatttgaagaggctcaatgcccctaggcattggatgctt 115 Query: 166 gacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccagggaa 225 |||||||||||||| |||||||| ||||||||||||||||||||||||||| | |||||| Sbjct: 116 gacaagcttggtggtgcttttgcacccaagccatcatctggtcctcacaagtctagggaa 175 Query: 226 tgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtaccgtgaa 285 ||| |||| |||||||||| ||| | |||||| ||||||||||||| || || | ||| Sbjct: 176 tgcttgccattgatcctcattctgcgaaacagattgaaatatgctctgacctatagagaa 235 Query: 286 gtgcaat-ctatccttatgcagcgtcatattatggttgatggaaaggtccgcactgacaa 344 || || | |||| || |||||| | ||| ||||||| ||||| ||||| | ||||| || Sbjct: 236 gt-cattgctattctcatgcagaggcatgttatggtagatgggaaggttagaactgataa 294 Query: 345 gacctaccctgctggtttcatgga 368 |||||||||||||||||||||||| Sbjct: 295 gacctaccctgctggtttcatgga 318 Score = 63.9 bits (32), Expect = 5e-07 Identities = 80/96 (83%) Strand = Plus / Plus Query: 463 aagttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatcccatacctg 522 ||||| ||||| |||||||| | || ||||| || |||||||||||||| ||||||||| Sbjct: 413 aagtttaagctttgcaaggttcgatccgtccaatttggccagaagggcattccatacctg 472 Query: 523 aacacctatgatggccgcaccatccgctacccagac 558 ||||| || || || || || || |||||||||||| Sbjct: 473 aacacatacgacgggcgtactattcgctacccagac 508
>gb|DQ268839.1| Solanum tuberosum clone 130D11 40S ribosomal protein S4-like protein mRNA, complete cds Length = 1052 Score = 204 bits (103), Expect = 2e-49 Identities = 349/431 (80%) Strand = Plus / Plus Query: 106 atggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgctt 165 |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 33 atggctagaggtttgaagaagcatctgaagaggctcaatgccccaaagcattggatgctt 92 Query: 166 gacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccagggaa 225 || || ||||||||||| ||||| ||||||||||| ||||| || |||||| | ||||| Sbjct: 93 gataaacttggtggagcatttgctcccaagccatcctctgggccacacaagtcaagggag 152 Query: 226 tgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtaccgtgaa 285 ||| |||| || || | ||| || | ||||| |||| ||||||||||| ||| | || Sbjct: 153 tgcttgccattggtcattatcatgcgaaacaggttgaagtatgctctcacatacagagag 212 Query: 286 gtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcactgacaag 345 ||| || || || ||||| || || ||||||||||||| || || | || || ||| Sbjct: 213 gtgatctcaattctgatgcaacgacaagttatggttgatgggaaagttaggacagataag 272 Query: 346 acctaccctgctggtttcatggacattatttctattcccaagactggtgagaactacagg 405 || || ||||||||||||||||| | |||| ||||| |||||| |||||||| | | Sbjct: 273 acatatcctgctggtttcatggatgtcgtttcaattccgaagactaatgagaacttccgt 332 Query: 406 cttctgtatgacaccaagggccgcttccgccttcactctgtcagggatgaggatgctaag 465 || || |||||||| |||||||| ||||| |||||||| ||||||| ||||| | ||| Sbjct: 333 ctcctttatgacactaagggccgattccgtcttcactcgctcagggacgaggaatccaag 392 Query: 466 ttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatcccatacctgaac 525 || ||||| ||||||||| | ||||| ||||| || |||||||| ||||||||||||||| Sbjct: 393 tttaagctttgcaaggtccgctctgtgcagtttggtcagaaggggatcccatacctgaac 452 Query: 526 acctatgatgg 536 || || ||||| Sbjct: 453 acttacgatgg 463
>gb|AY070467.1| Arabidopsis thaliana AT5g58420/mqj2_10 mRNA, complete cds Length = 995 Score = 202 bits (102), Expect = 9e-49 Identities = 363/450 (80%) Strand = Plus / Plus Query: 105 catggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgct 164 |||||| ||||||||||||||||||||||||||||| ||||| || ||||||||||| Sbjct: 73 catggcgaggggtttgaagaagcatctgaagaggcttaatgcgcctaagcattggatgct 132 Query: 165 tgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccaggga 224 |||||| |||||||| || |||||||| ||||| || ||||| || || ||| | ||||| Sbjct: 133 tgacaaacttggtggtgcatttgccccaaagccgtcttctggaccacataagtcaaggga 192 Query: 225 atgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtaccgtga 284 ||||| || || |||| ||| | |||||||| || | |||||||| || |||||||| Sbjct: 193 gtgccttcccctcgtccttatcatcaggaacaggttggagtatgctcttacctaccgtga 252 Query: 285 agtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcactgacaa 344 |||| || ||| | ||||| | ||||| |||||||| || ||| | || ||||| Sbjct: 253 agtgatttcaatcttgatgcaaaggcatatccaagttgatgggaaagtcaggacggacaa 312 Query: 345 gacctaccctgctggtttcatggacattatttctattcccaagactggtgagaactacag 404 |||||||||||||||||||||||| || | ||||| |||||||| |||||||| | | Sbjct: 313 gacctaccctgctggtttcatggatgttgtgtctatccccaagaccaatgagaacttccg 372 Query: 405 gcttctgtatgacaccaagggccgcttccgccttcactctgtcagggatgaggatgctaa 464 ||||| ||||| |||||||| || ||||| || ||||| ||| ||||||||| || || Sbjct: 373 tcttctctatgataccaagggacgtttccgtctccactccatcaaggatgaggaagcaaa 432 Query: 465 gttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatcccatacctgaa 524 |||||| || |||||||| | ||| ||||||| || ||||| ||||| || |||||||| Sbjct: 433 gttcaaactttgcaaggttcgatctatccagtttggacagaaaggcattccttacctgaa 492 Query: 525 cacctatgatggccgcaccatccgctaccc 554 ||| || ||||| ||||||||||| ||||| Sbjct: 493 cacttacgatggtcgcaccatccgttaccc 522
>emb|BX830283.1|CNS09ZZO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB70ZD03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 988 Score = 202 bits (102), Expect = 9e-49 Identities = 363/450 (80%) Strand = Plus / Plus Query: 105 catggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgct 164 |||||| ||||||||||||||||||||||||||||| ||||| || ||||||||||| Sbjct: 64 catggcgaggggtttgaagaagcatctgaagaggcttaatgcgcctaagcattggatgct 123 Query: 165 tgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccaggga 224 |||||| |||||||| || |||||||| ||||| || ||||| || || ||| | ||||| Sbjct: 124 tgacaaacttggtggtgcatttgccccaaagccgtcttctggaccacataagtcaaggga 183 Query: 225 atgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtaccgtga 284 | ||| || || |||| ||| | |||||||| |||| |||||||| || |||||||| Sbjct: 184 gttccttcccctcgtccttatcatcaggaacaggttgaagtatgctcttacctaccgtga 243 Query: 285 agtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcactgacaa 344 |||| || ||| | ||||| | ||||| |||||||| || ||| | || ||||| Sbjct: 244 agtgatttcaatcttgatgcaaaggcatatccaagttgatgggaaagtcaggacggacaa 303 Query: 345 gacctaccctgctggtttcatggacattatttctattcccaagactggtgagaactacag 404 |||||||||||||||||||||||| || | ||||| |||||||| |||||||| | | Sbjct: 304 gacctaccctgctggtttcatggatgttgtgtctatccccaagaccaatgagaacttccg 363 Query: 405 gcttctgtatgacaccaagggccgcttccgccttcactctgtcagggatgaggatgctaa 464 ||||| ||||| |||||||| || ||||| || ||||| ||| ||||||||| || || Sbjct: 364 tcttctctatgataccaagggacgtttccgtctccactccatcaaggatgaggaagcaaa 423 Query: 465 gttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatcccatacctgaa 524 |||||| || |||||||| | ||| ||||||| || ||||| ||||| || |||||||| Sbjct: 424 gttcaaactttgcaaggttcgatctatccagtttggacagaaaggcattccttacctgaa 483 Query: 525 cacctatgatggccgcaccatccgctaccc 554 ||| || ||||| ||||||||||| ||||| Sbjct: 484 cacttacgatggtcgcaccatccgttaccc 513
>emb|BX832264.1|CNS09ZM6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH61ZG11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 997 Score = 202 bits (102), Expect = 9e-49 Identities = 363/450 (80%) Strand = Plus / Plus Query: 105 catggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgct 164 |||||| ||||||||||||||||||||||||||||| ||||| || ||||||||||| Sbjct: 73 catggcgaggggtttgaagaagcatctgaagaggcttaatgcgcctaagcattggatgct 132 Query: 165 tgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccaggga 224 |||||| |||||||| || |||||||| ||||| || ||||| || || ||| | ||||| Sbjct: 133 tgacaaacttggtggtgcatttgccccaaagccgtcttctggaccacataagtcaaggga 192 Query: 225 atgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtaccgtga 284 | ||| || || |||| ||| | |||||||| |||| |||||||| || |||||||| Sbjct: 193 gttccttcccctcgtccttatcatcaggaacaggttgaagtatgctcttacctaccgtga 252 Query: 285 agtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcactgacaa 344 |||| || ||| | ||||| | ||||| |||||||| || ||| | || ||||| Sbjct: 253 agtgatttcaatcttgatgcaaaggcatatccaagttgatgggaaagtcaggacggacaa 312 Query: 345 gacctaccctgctggtttcatggacattatttctattcccaagactggtgagaactacag 404 |||||||||||||||||||||||| || | ||||| |||||||| |||||||| | | Sbjct: 313 gacctaccctgctggtttcatggatgttgtgtctatccccaagaccaatgagaacttccg 372 Query: 405 gcttctgtatgacaccaagggccgcttccgccttcactctgtcagggatgaggatgctaa 464 ||||| ||||| |||||||| || ||||| || ||||| ||| ||||||||| || || Sbjct: 373 tcttctctatgataccaagggacgtttccgtctccactccatcaaggatgaggaagcaaa 432 Query: 465 gttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatcccatacctgaa 524 |||||| || |||||||| | ||| ||||||| || ||||| ||||| || |||||||| Sbjct: 433 gttcaaactttgcaaggttcgatctatccagtttggacagaaaggcattccttacctgaa 492 Query: 525 cacctatgatggccgcaccatccgctaccc 554 ||| || ||||| ||||||||||| ||||| Sbjct: 493 cacttacgatggtcgcaccatccgttaccc 522
>gb|BT017558.1| Zea mays clone EL01N0424H12.c mRNA sequence Length = 1145 Score = 200 bits (101), Expect = 3e-48 Identities = 146/161 (90%) Strand = Plus / Minus Query: 394 gagaactacaggcttctgtatgacaccaagggccgcttccgccttcactctgtcagggat 453 |||||||||||||| ||||| || |||||||||||||||||||||||| | |||||||| Sbjct: 680 gagaactacaggctgctgtacgataccaagggccgcttccgccttcacccaatcagggat 621 Query: 454 gaggatgctaagttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatc 513 |||||||||||||||||||| |||||||| |||||||| ||||| || |||||||||||| Sbjct: 620 gaggatgctaagttcaagctttgcaaggttaggtctgttcagtttgggcagaagggcatc 561 Query: 514 ccatacctgaacacctatgatggccgcaccatccgctaccc 554 || || |||||||| ||||| |||||||||||||||||||| Sbjct: 560 ccttatctgaacacgtatgacggccgcaccatccgctaccc 520 Score = 196 bits (99), Expect = 5e-47 Identities = 231/275 (84%) Strand = Plus / Minus Query: 93 cgagctcgcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtc 152 |||||| || ||||||||||| || |||||||||||| |||||||||||||||| || Sbjct: 1063 cgagcttgccaccatggctagaggattgaagaagcatttgaagaggctcaatgcgcccaa 1004 Query: 153 tcattggatgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctca 212 ||||||||||| ||||||||||| ||||||||||| ||||||||||| ||||| ||||| Sbjct: 1003 gcattggatgctggacaagcttggcggagcttttgctcccaagccatcttctggacctca 944 Query: 213 caaggccagggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgctct 272 |||| | ||||| |||||||| ||||||||||| | |||||||| || || |||||||| Sbjct: 943 caagtctagggagtgcctgccactgatcctcattatcaggaacaggctcaagtatgctct 884 Query: 273 cacgtaccgtgaagtgcaatctatccttatgcagcgtcatattatggttgatggaaaggt 332 || |||||||| || || ||||| ||||| || ||| | | |||||||| ||||| Sbjct: 883 tacataccgtgaggtcatttccatcctgatgcaacgccatgtacttgttgatggcaaggt 824 Query: 333 ccgcactgacaagacctaccctgctggtttcatgg 367 | | || |||||||||||||||||||||||||||| Sbjct: 823 caggacagacaagacctaccctgctggtttcatgg 789
>gb|AY143834.1| Arabidopsis thaliana At5g58420/mqj2_10 mRNA, complete cds Length = 789 Score = 200 bits (101), Expect = 3e-48 Identities = 362/449 (80%) Strand = Plus / Plus Query: 106 atggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgctt 165 ||||| ||||||||||||||||||||||||||||| ||||| || |||||||||||| Sbjct: 1 atggcgaggggtttgaagaagcatctgaagaggcttaatgcgcctaagcattggatgctt 60 Query: 166 gacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccagggaa 225 ||||| |||||||| || |||||||| ||||| || ||||| || || ||| | ||||| Sbjct: 61 gacaaacttggtggtgcatttgccccaaagccgtcttctggaccacataagtcaagggag 120 Query: 226 tgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtaccgtgaa 285 ||||| || || |||| ||| | |||||||| || | |||||||| || ||||||||| Sbjct: 121 tgccttcccctcgtccttatcatcaggaacaggttggagtatgctcttacctaccgtgaa 180 Query: 286 gtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcactgacaag 345 ||| || ||| | ||||| | ||||| |||||||| || ||| | || |||||| Sbjct: 181 gtgatttcaatcttgatgcaaaggcatatccaagttgatgggaaagtcaggacggacaag 240 Query: 346 acctaccctgctggtttcatggacattatttctattcccaagactggtgagaactacagg 405 ||||||||||||||||||||||| || | ||||| |||||||| |||||||| | | Sbjct: 241 acctaccctgctggtttcatggatgttgtgtctatccccaagaccaatgagaacttccgt 300 Query: 406 cttctgtatgacaccaagggccgcttccgccttcactctgtcagggatgaggatgctaag 465 ||||| ||||| |||||||| || ||||| || ||||| ||| ||||||||| || ||| Sbjct: 301 cttctctatgataccaagggacgtttccgtctccactccatcaaggatgaggaagcaaag 360 Query: 466 ttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatcccatacctgaac 525 ||||| || |||||||| | ||| ||||||| || ||||| ||||| || ||||||||| Sbjct: 361 ttcaaactttgcaaggttcgatctatccagtttggacagaaaggcattccttacctgaac 420 Query: 526 acctatgatggccgcaccatccgctaccc 554 || || ||||| ||||||||||| ||||| Sbjct: 421 acttacgatggtcgcaccatccgttaccc 449
>emb|BX832253.1|CNS09ZUO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH61ZB04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 945 Score = 200 bits (101), Expect = 3e-48 Identities = 353/437 (80%) Strand = Plus / Plus Query: 118 ttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggt 177 |||||||||||||| |||||||||||||| || ||||||||||||||||| |||||| Sbjct: 11 ttgaagaagcatctaaagaggctcaatgctcctaagcattggatgcttgacaaacttggt 70 Query: 178 ggagcttttgcccccaagccatcatctggtcctcacaaggccagggaatgcctgcctctg 237 || || || || ||||| ||||| ||||| ||||||||| | ||||| || || ||||| Sbjct: 71 ggtgccttcgctcccaaaccatcttctggacctcacaagtcgagggagtgtcttcctctt 130 Query: 238 atcctcatcctgaggaacagactgaaatatgctctcacgtaccgtgaagtgcaatctatc 297 |||| ||| | |||||||| |||| |||||| | || ||||||||||| |||||| Sbjct: 131 gtcctgatcatcaggaacaggttgaagtatgctttgacttaccgtgaagttatttctatc 190 Query: 298 cttatgcagcgtcatattatggttgatggaaaggtccgcactgacaagacctaccctgct 357 | ||||| | ||||| |||||||| || ||| | ||||||||||| ||||||||| Sbjct: 191 ttgatgcaaaggcatatccaagttgatggcaaagtcaggactgacaagacttaccctgct 250 Query: 358 ggtttcatggacattatttctattcccaagactggtgagaactacaggcttctgtatgac 417 ||||||||||| || | || || |||||||| |||||||| | | ||| | || ||| Sbjct: 251 ggtttcatggatgttgtatccatccccaagaccaatgagaacttccgtcttttctacgac 310 Query: 418 accaagggccgcttccgccttcactctgtcagggatgaggatgctaagttcaagctctgc 477 |||||||| || ||||| || ||||| ||| ||||||||| || ||||||||||| ||| Sbjct: 311 accaagggacgtttccgtctccactccatcaaggatgaggaagcaaagttcaagctttgc 370 Query: 478 aaggtcaggtctgtccagttcggccagaagggcatcccatacctgaacacctatgatggc 537 ||||| || ||| ||||||| || |||||||| || ||||||||||| || |||||||| Sbjct: 371 aaggttagatctatccagtttggtcagaagggaattccatacctgaaaacttatgatggt 430 Query: 538 cgcaccatccgctaccc 554 ||||||||||| ||||| Sbjct: 431 cgcaccatccgttaccc 447
>gb|AF071891.1|AF071891 Prunus armeniaca 40S ribosomal protein S4 (RPS4) mRNA, complete cds Length = 1086 Score = 200 bits (101), Expect = 3e-48 Identities = 191/221 (86%) Strand = Plus / Plus Query: 106 atggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgctt 165 |||||||| || |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 47 atggctagaggattgaagaagcatctgaagaggctcaatgccccaaagcattggatgctc 106 Query: 166 gacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccagggaa 225 ||||||||||| || |||||||| ||||||||||||||||| |||||||| | ||||| Sbjct: 107 gacaagcttgggggtgcttttgctcccaagccatcatctgggcctcacaaatctagggag 166 Query: 226 tgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtaccgtgaa 285 ||||| || ||||||||||||||||||||||| |||| ||||||||||| |||||||| Sbjct: 167 tgccttccactgatcctcatcctgaggaacaggttgaagtatgctctcacataccgtgag 226 Query: 286 gtgcaatctatccttatgcagcgtcatattatggttgatgg 326 || || || || ||||||||||||||| |||||||||| Sbjct: 227 gtcgtttccattctcatgcagcgtcatattttggttgatgg 267 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 412 tatgacaccaagggccgcttccgccttcactctgtcagggatgaggatgctaagttcaag 471 |||||||||||||| || ||||| || ||||| | || |||||||| ||||||||||| Sbjct: 341 tatgacaccaagggtcggttccggctccactcaattagagatgaggagtctaagttcaag 400 Query: 472 ctctgcaaggtcaggtctgtccagttcggccagaagggcatccc 515 || |||||||| |||| || ||||| || |||||||||||||| Sbjct: 401 ctatgcaaggttcggtcagtgcagtttgggcagaagggcatccc 444
>emb|BX832274.1|CNS09ZPH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH62ZE09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 978 Score = 196 bits (99), Expect = 5e-47 Identities = 364/451 (80%), Gaps = 1/451 (0%) Strand = Plus / Plus Query: 105 catggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgct 164 |||||| ||||||||||||||||||||||||||||| ||||| || ||||||||||| Sbjct: 93 catggcgaggggtttgaagaagcatctgaagaggcttaatgcgcctaagcattggatgct 152 Query: 165 tgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccaggga 224 |||||| |||||||| || |||||||| ||||| || ||||| || || ||| | ||||| Sbjct: 153 tgacaaacttggtggtgcatttgccccaaagccgtcttctggaccacataagtcaaggga 212 Query: 225 atgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtaccgtga 284 ||||| || || |||| ||| | |||||||| |||| |||||||| || |||||||| Sbjct: 213 gtgccttcccctcgtccttatcatcaggaacaggttgaagtatgctcttacctaccgtga 272 Query: 285 agtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcactgacaa 344 |||| || ||| | ||||| | ||||| |||||||| || ||| | || ||||| Sbjct: 273 agtgatttcaatcttgatgcaaaggcatatccaagttgatgggaaagtcaggacggacaa 332 Query: 345 gacctaccctgctggtttcatggacattatttctattcccaagactggtgagaactacag 404 |||||||||||||||||||||||| || | ||||| |||||||| |||||||| | | Sbjct: 333 gacctaccctgctggtttcatggatgttgtgtctatccccaagaccaatgagaacttccg 392 Query: 405 gcttctgtatgacaccaagggccgcttccgccttcactctgtcagggatgaggatgctaa 464 ||||| ||||| |||||||| || ||||| || ||||| ||| ||||||||| || || Sbjct: 393 tcttctctatgataccaagggacgtttccgtctccactccatcaaggatgaggaagcaaa 452 Query: 465 gttcaagctctgcaaggtcaggtctgtccagttcggccagaagggca-tcccatacctga 523 |||||| || |||||||| | ||| ||||||| || ||||| |||| | || ||||||| Sbjct: 453 gttcaaactttgcaaggttcgatctatccagtttggacagaaaggcattgccttacctga 512 Query: 524 acacctatgatggccgcaccatccgctaccc 554 |||| || ||||| ||||||||||| ||||| Sbjct: 513 acacttacgatggtcgcaccatccgttaccc 543
>gb|AY084230.1| Arabidopsis thaliana clone 10042 mRNA, complete sequence Length = 1023 Score = 188 bits (95), Expect = 1e-44 Identities = 365/455 (80%) Strand = Plus / Plus Query: 100 gcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattgg 159 |||| |||||| || ||||||||||||||| |||||||||||||||| || |||||| Sbjct: 108 gcaaacatggcaagaggtttgaagaagcatttgaagaggctcaatgctcctaagcattgg 167 Query: 160 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggcc 219 |||||||| || |||||||| || |||||||||||||| || ||||| || |||||| | Sbjct: 168 atgcttgataaacttggtggtgcctttgcccccaagccgtcttctgggccacacaagtct 227 Query: 220 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtac 279 ||||| || | || || |||| ||| | |||||||| |||| |||||||| || ||| Sbjct: 228 agggagtgtttacccttggtccttatcatcaggaacaggttgaagtatgctctgacatac 287 Query: 280 cgtgaagtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcact 339 | |||||| || ||| | ||||| | |||||| ||||||||| || || | ||| Sbjct: 288 agagaagtgatttcgatcttgatgcaaaggcatattcaggttgatgggaaagtgaggact 347 Query: 340 gacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgagaac 399 |||||||| |||||||||||||||||||| || | ||||| ||||| || ||||||| Sbjct: 348 gacaagacttaccctgctggtttcatggatgttgtgtctatccccaaaacaaatgagaac 407 Query: 400 tacaggcttctgtatgacaccaagggccgcttccgccttcactctgtcagggatgaggat 459 | | | ||| |||||||||||||||| || ||||| || ||||| ||| ||||||||| Sbjct: 408 ttccgtcttttgtatgacaccaagggacgtttccgtctccactccatcaaggatgaggag 467 Query: 460 gctaagttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatcccatac 519 |||||||||||||| ||||| || || || |||| || || |||||||| || || ||| Sbjct: 468 gctaagttcaagctttgcaaagtgagatcgatccaatttggtcagaagggtattccctac 527 Query: 520 ctgaacacctatgatggccgcaccatccgctaccc 554 ||||||| |||||||| ||||||||||| ||||| Sbjct: 528 ttgaacacatatgatggtcgcaccatccgttaccc 562
>ref|NM_127291.2| Arabidopsis thaliana structural constituent of ribosome AT2G17360 mRNA, complete cds Length = 1074 Score = 184 bits (93), Expect = 2e-43 Identities = 360/449 (80%) Strand = Plus / Plus Query: 100 gcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattgg 159 |||| |||||| || ||||||||||||||| |||||||||||||||| || |||||| Sbjct: 108 gcaaacatggcaagaggtttgaagaagcatttgaagaggctcaatgctcctaagcattgg 167 Query: 160 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggcc 219 |||||||| || |||||||| || |||||||||||||| || ||||| || |||||| | Sbjct: 168 atgcttgataaacttggtggtgcctttgcccccaagccgtcttctgggccacacaagtct 227 Query: 220 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtac 279 ||||| || | || || |||| ||| | |||||||| |||| |||||||| || ||| Sbjct: 228 agggagtgtttacccttggtccttatcatcaggaacaggttgaagtatgctctgacatac 287 Query: 280 cgtgaagtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcact 339 | |||||| || ||| | ||||| | |||||| ||||||||| || || | ||| Sbjct: 288 agagaagtgatttcgatcttgatgcaaaggcatattcaggttgatgggaaagtgaggact 347 Query: 340 gacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgagaac 399 |||||||| |||||||||||||||||||| || | ||||| ||||| || ||||||| Sbjct: 348 gacaagacttaccctgctggtttcatggatgttgtgtctatccccaaaacaaatgagaac 407 Query: 400 tacaggcttctgtatgacaccaagggccgcttccgccttcactctgtcagggatgaggat 459 | | | ||| |||||||||||||||| || ||||| || ||||| ||| ||||||||| Sbjct: 408 ttccgtcttttgtatgacaccaagggacgtttccgtctccactccatcaaggatgaggag 467 Query: 460 gctaagttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatcccatac 519 |||||||||||||| ||||| || || || |||| || || |||||||| || || ||| Sbjct: 468 gctaagttcaagctttgcaaagtgagatcgatccaatttggtcagaagggtattccctac 527 Query: 520 ctgaacacctatgatggccgcaccatccg 548 ||||||| |||||||| ||||||||||| Sbjct: 528 ttgaacacatatgatggtcgcaccatccg 556
>gb|AY035131.1| Arabidopsis thaliana putative ribosomal protein S4 (At2g17360) mRNA, complete cds Length = 1032 Score = 184 bits (93), Expect = 2e-43 Identities = 360/449 (80%) Strand = Plus / Plus Query: 100 gcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattgg 159 |||| |||||| || ||||||||||||||| |||||||||||||||| || |||||| Sbjct: 67 gcaaacatggcaagaggtttgaagaagcatttgaagaggctcaatgctcctaagcattgg 126 Query: 160 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggcc 219 |||||||| || |||||||| || |||||||||||||| || ||||| || |||||| | Sbjct: 127 atgcttgataaacttggtggtgcctttgcccccaagccgtcttctgggccacacaagtct 186 Query: 220 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtac 279 ||||| || | || || |||| ||| | |||||||| |||| |||||||| || ||| Sbjct: 187 agggagtgtttacccttggtccttatcatcaggaacaggttgaagtatgctctgacatac 246 Query: 280 cgtgaagtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcact 339 | |||||| || ||| | ||||| | |||||| ||||||||| || || | ||| Sbjct: 247 agagaagtgatttcgatcttgatgcaaaggcatattcaggttgatgggaaagtgaggact 306 Query: 340 gacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgagaac 399 |||||||| |||||||||||||||||||| || | ||||| ||||| || ||||||| Sbjct: 307 gacaagacttaccctgctggtttcatggatgttgtgtctatccccaaaacaaatgagaac 366 Query: 400 tacaggcttctgtatgacaccaagggccgcttccgccttcactctgtcagggatgaggat 459 | | | ||| |||||||||||||||| || ||||| || ||||| ||| ||||||||| Sbjct: 367 ttccgtcttttgtatgacaccaagggacgtttccgtctccactccatcaaggatgaggag 426 Query: 460 gctaagttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatcccatac 519 |||||||||||||| ||||| || || || |||| || || |||||||| || || ||| Sbjct: 427 gctaagttcaagctttgcaaagtgagatcgatccaatttggtcagaagggtattccctac 486 Query: 520 ctgaacacctatgatggccgcaccatccg 548 ||||||| |||||||| ||||||||||| Sbjct: 487 ttgaacacatatgatggtcgcaccatccg 515
>gb|AF370469.1|AF370469 Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 1034 Score = 184 bits (93), Expect = 2e-43 Identities = 360/449 (80%) Strand = Plus / Plus Query: 100 gcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattgg 159 |||| |||||| || ||||||||||||||| |||||||||||||||| || |||||| Sbjct: 68 gcaaacatggcaagaggtttgaagaagcatttgaagaggctcaatgctcctaagcattgg 127 Query: 160 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggcc 219 |||||||| || |||||||| || |||||||||||||| || ||||| || |||||| | Sbjct: 128 atgcttgataaacttggtggtgcctttgcccccaagccgtcttctgggccacacaagtct 187 Query: 220 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtac 279 ||||| || | || || |||| ||| | |||||||| |||| |||||||| || ||| Sbjct: 188 agggagtgtttacccttggtccttatcatcaggaacaggttgaagtatgctctgacatac 247 Query: 280 cgtgaagtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcact 339 | |||||| || ||| | ||||| | |||||| ||||||||| || || | ||| Sbjct: 248 agagaagtgatttcgatcttgatgcaaaggcatattcaggttgatgggaaagtgaggact 307 Query: 340 gacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgagaac 399 |||||||| |||||||||||||||||||| || | ||||| ||||| || ||||||| Sbjct: 308 gacaagacttaccctgctggtttcatggatgttgtgtctatccccaaaacaaatgagaac 367 Query: 400 tacaggcttctgtatgacaccaagggccgcttccgccttcactctgtcagggatgaggat 459 | | | ||| |||||||||||||||| || ||||| || ||||| ||| ||||||||| Sbjct: 368 ttccgtcttttgtatgacaccaagggacgtttccgtctccactccatcaaggatgaggag 427 Query: 460 gctaagttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatcccatac 519 |||||||||||||| ||||| || || || |||| || || |||||||| || || ||| Sbjct: 428 gctaagttcaagctttgcaaagtgagatcgatccaatttggtcagaagggtattccctac 487 Query: 520 ctgaacacctatgatggccgcaccatccg 548 ||||||| |||||||| ||||||||||| Sbjct: 488 ttgaacacatatgatggtcgcaccatccg 516
>emb|BX818868.1|CNS0A8UP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB21ZB04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1007 Score = 184 bits (93), Expect = 2e-43 Identities = 360/449 (80%) Strand = Plus / Plus Query: 100 gcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattgg 159 |||| |||||| || ||||||||||||||| |||||||||||||||| || |||||| Sbjct: 60 gcaaacatggcaagaggtttgaagaagcatttgaagaggctcaatgctcctaagcattgg 119 Query: 160 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggcc 219 |||||||| || |||||||| || |||||||||||||| || ||||| || |||||| | Sbjct: 120 atgcttgataaacttggtggtgcctttgcccccaagccgtcttctgggccacacaagtct 179 Query: 220 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtac 279 ||||| || | || || |||| ||| | |||||||| |||| |||||||| || ||| Sbjct: 180 agggagtgtttacccttggtccttatcatcaggaacaggttgaagtatgctctgacatac 239 Query: 280 cgtgaagtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcact 339 | |||||| || ||| | ||||| | |||||| ||||||||| || || | ||| Sbjct: 240 agagaagtgatttcgatcttgatgcaaaggcatattcaggttgatgggaaagtgaggact 299 Query: 340 gacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgagaac 399 |||||||| |||||||||||||||||||| || | ||||| ||||| || ||||||| Sbjct: 300 gacaagacttaccctgctggtttcatggatgttgtgtctatccccaaaacaaatgagaac 359 Query: 400 tacaggcttctgtatgacaccaagggccgcttccgccttcactctgtcagggatgaggat 459 | | | ||| |||||||||||||||| || ||||| || ||||| ||| ||||||||| Sbjct: 360 ttccgtcttttgtatgacaccaagggacgtttccgtctccactccatcaaggatgaggag 419 Query: 460 gctaagttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatcccatac 519 |||||||||||||| ||||| || || || |||| || || |||||||| || || ||| Sbjct: 420 gctaagttcaagctttgcaaagtgagatcgatccaatttggtcagaagggtattccctac 479 Query: 520 ctgaacacctatgatggccgcaccatccg 548 ||||||| |||||||| ||||||||||| Sbjct: 480 ttgaacacatatgatggtcgcaccatccg 508
>gb|AY062983.1| Arabidopsis thaliana putative ribosomal protein S4 (At2g17360) mRNA, complete cds Length = 817 Score = 180 bits (91), Expect = 3e-42 Identities = 355/443 (80%) Strand = Plus / Plus Query: 106 atggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgctt 165 ||||| || ||||||||||||||| |||||||||||||||| || |||||||||||| Sbjct: 1 atggcaagaggtttgaagaagcatttgaagaggctcaatgctcctaagcattggatgctt 60 Query: 166 gacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccagggaa 225 || || |||||||| || |||||||||||||| || ||||| || |||||| | ||||| Sbjct: 61 gataaacttggtggtgcctttgcccccaagccgtcttctgggccacacaagtctagggag 120 Query: 226 tgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtaccgtgaa 285 || | || || |||| ||| | |||||||| |||| |||||||| || ||| | ||| Sbjct: 121 tgtttacccttggtccttatcatcaggaacaggttgaagtatgctctgacatacagagaa 180 Query: 286 gtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcactgacaag 345 ||| || ||| | ||||| | |||||| ||||||||| || || | ||||||||| Sbjct: 181 gtgatttcgatcttgatgcaaaggcatattcaggttgatgggaaagtgaggactgacaag 240 Query: 346 acctaccctgctggtttcatggacattatttctattcccaagactggtgagaactacagg 405 || |||||||||||||||||||| || | ||||| ||||| || |||||||| | | Sbjct: 241 acttaccctgctggtttcatggatgttgtgtctatccccaaaacaaatgagaacttccgt 300 Query: 406 cttctgtatgacaccaagggccgcttccgccttcactctgtcagggatgaggatgctaag 465 ||| |||||||||||||||| || ||||| || ||||| ||| ||||||||| |||||| Sbjct: 301 cttttgtatgacaccaagggacgtttccgtctccactccatcaaggatgaggaggctaag 360 Query: 466 ttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatcccatacctgaac 525 |||||||| ||||| || || || |||| || || |||||||| || || ||| ||||| Sbjct: 361 ttcaagctttgcaaagtgagatcgatccaatttggtcagaagggtattccctacttgaac 420 Query: 526 acctatgatggccgcaccatccg 548 || |||||||| ||||||||||| Sbjct: 421 acatatgatggtcgcaccatccg 443
>gb|AY064625.1| Arabidopsis thaliana unknown protein mRNA, complete cds Length = 813 Score = 180 bits (91), Expect = 3e-42 Identities = 355/443 (80%) Strand = Plus / Plus Query: 106 atggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgctt 165 ||||| || ||||||||||||||| |||||||||||||||| || |||||||||||| Sbjct: 1 atggcaagaggtttgaagaagcatttgaagaggctcaatgctcctaagcattggatgctt 60 Query: 166 gacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccagggaa 225 || || |||||||| || |||||||||||||| || ||||| || |||||| | ||||| Sbjct: 61 gataaacttggtggtgcctttgcccccaagccgtcttctgggccacacaagtctagggag 120 Query: 226 tgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtaccgtgaa 285 || | || || |||| ||| | |||||||| |||| |||||||| || ||| | ||| Sbjct: 121 tgtttacccttggtccttatcatcaggaacaggttgaagtatgctctgacatacagagaa 180 Query: 286 gtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcactgacaag 345 ||| || ||| | ||||| | |||||| ||||||||| || || | ||||||||| Sbjct: 181 gtgatttcgatcttgatgcaaaggcatattcaggttgatgggaaagtgaggactgacaag 240 Query: 346 acctaccctgctggtttcatggacattatttctattcccaagactggtgagaactacagg 405 || |||||||||||||||||||| || | ||||| ||||| || |||||||| | | Sbjct: 241 acttaccctgctggtttcatggatgttgtgtctatccccaaaacaaatgagaacttccgt 300 Query: 406 cttctgtatgacaccaagggccgcttccgccttcactctgtcagggatgaggatgctaag 465 ||| |||||||||||||||| || ||||| || ||||| ||| ||||||||| |||||| Sbjct: 301 cttttgtatgacaccaagggacgtttccgtctccactccatcaaggatgaggaggctaag 360 Query: 466 ttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatcccatacctgaac 525 |||||||| ||||| || || || |||| || || |||||||| || || ||| ||||| Sbjct: 361 ttcaagctttgcaaagtgagatcgatccaatttggtcagaagggtattccctacttgaac 420 Query: 526 acctatgatggccgcaccatccg 548 || |||||||| ||||||||||| Sbjct: 421 acatatgatggtcgcaccatccg 443
>emb|BX820506.1|CNS0A8QA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH41ZE09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1000 Score = 168 bits (85), Expect = 1e-38 Identities = 358/449 (79%) Strand = Plus / Plus Query: 100 gcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattgg 159 |||| |||||| || ||||||||||||||| |||||||||||||||| || |||||| Sbjct: 53 gcaaacatggcaagaggtttgaagaagcatttgaagaggctcaatgctcctaagcattgg 112 Query: 160 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggcc 219 |||||||| || |||||||| || |||||||||||||| || ||||| || |||||| | Sbjct: 113 atgcttgataaacttggtggtgcctttgcccccaagccgtcttctgggccacacaagtct 172 Query: 220 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtac 279 ||||| || | || || |||| ||| | |||||||| |||| |||||||| || ||| Sbjct: 173 agggagtgtttacccttggtccttatcatcaggaacaggttgaagtatgctctgacatac 232 Query: 280 cgtgaagtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcact 339 | |||||| || ||| | ||||| | |||||| ||||||||| || || | ||| Sbjct: 233 agagaagtgatttcgatcttgatgcaaaggcatattcaggttgatgggaaagtgaggact 292 Query: 340 gacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgagaac 399 |||||||| |||||||||||||||||||| || | ||||| ||||| | ||||||| Sbjct: 293 gacaagacttaccctgctggtttcatggatgttgtgtctatccccaaaaaaaatgagaac 352 Query: 400 tacaggcttctgtatgacaccaagggccgcttccgccttcactctgtcagggatgaggat 459 | | | ||| |||||||||||||||| || ||||| || ||||| ||| ||||||||| Sbjct: 353 ttccgtcttttgtatgacaccaagggacgtttccgtctccactccatcaaggatgaggag 412 Query: 460 gctaagttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatcccatac 519 |||||||||||||| ||||| || || || |||| || || |||||||| || || ||| Sbjct: 413 gctaagttcaagctttgcaaagtgagatcgatccaatttggtcagaagggtattccctac 472 Query: 520 ctgaacacctatgatggccgcaccatccg 548 ||||||| ||| |||| ||||||||||| Sbjct: 473 ttgaacacatattatggtcgcaccatccg 501
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 161 bits (81), Expect = 3e-36 Identities = 156/181 (86%) Strand = Plus / Minus Query: 187 gcccccaagccatcatctggtcctcacaaggccagggaatgcctgcctctgatcctcatc 246 |||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 318017 gcccccaagccatcttctggtcctcacaagtccagggagtgcctgcctctgatcctcatt 317958 Query: 247 ctgaggaacagactgaaatatgctctcacgtaccgtgaagtgcaatctatccttatgcag 306 | |||||||| || || |||||||| || |||||||| || |||||||| |||||| Sbjct: 317957 atcaggaacaggctcaagtatgctctgacataccgtgaggttatttctatcctcatgcag 317898 Query: 307 cgtcatattatggttgatggaaaggtccgcactgacaagacctaccctgctggtttcatg 366 || ||| | |||||||||| |||||| | ||||||||||||||||| |||||||||||| Sbjct: 317897 cgccatgtcttggttgatggcaaggtcaggactgacaagacctacccagctggtttcatg 317838 Query: 367 g 367 | Sbjct: 317837 g 317837 Score = 129 bits (65), Expect = 1e-26 Identities = 86/93 (92%) Strand = Plus / Minus Query: 373 atttctattcccaagactggtgagaactacaggcttctgtatgacaccaagggccgcttc 432 ||||| || |||||||||||||||||||||||||||||||| ||||||||||| || ||| Sbjct: 317739 atttccatccccaagactggtgagaactacaggcttctgtacgacaccaagggacgtttc 317680 Query: 433 cgccttcactctgtcagggatgaggatgctaag 465 |||||||| ||||||| |||||||||||||||| Sbjct: 317679 cgccttcagtctgtcaaggatgaggatgctaag 317647 Score = 117 bits (59), Expect = 4e-23 Identities = 83/91 (91%) Strand = Plus / Minus Query: 464 agttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatcccatacctga 523 |||||||||| |||||||| ||||||| ||||| ||||||||||| ||||| ||||||| Sbjct: 317399 agttcaagctttgcaaggttcggtctgtgcagtttggccagaagggaatcccctacctga 317340 Query: 524 acacctatgatggccgcaccatccgctaccc 554 ||||||||||||| ||||||||||||||||| Sbjct: 317339 acacctatgatggtcgcaccatccgctaccc 317309 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Minus Query: 112 aggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaag 171 ||||||||||||||||||||||||||||||||||| || ||||||||||| |||||| Sbjct: 318196 aggggtttgaagaagcatctgaagaggctcaatgcgcccaagcattggatgctcgacaag 318137 Query: 172 cttggtggagcttttg 187 |||||||||||||||| Sbjct: 318136 cttggtggagcttttg 318121 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 76 agcacggcgacctagcccgagctcgcaaccatgg 109 |||||||||||||||||||| ||||||||||||| Sbjct: 319055 agcacggcgacctagcccgacctcgcaaccatgg 319022
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 161 bits (81), Expect = 3e-36 Identities = 156/181 (86%) Strand = Plus / Plus Query: 187 gcccccaagccatcatctggtcctcacaaggccagggaatgcctgcctctgatcctcatc 246 |||||||||||||| ||||| ||||||||| |||||||||||||||| |||||||||||| Sbjct: 14497061 gcccccaagccatcgtctggacctcacaagtccagggaatgcctgcccctgatcctcatc 14497120 Query: 247 ctgaggaacagactgaaatatgctctcacgtaccgtgaagtgcaatctatccttatgcag 306 | |||||||| |||| ||||| || || |||||||| || |||||||| |||||| Sbjct: 14497121 atcaggaacaggttgaagtatgcgctgacataccgtgaggttatctctatcctgatgcag 14497180 Query: 307 cgtcatattatggttgatggaaaggtccgcactgacaagacctaccctgctggtttcatg 366 || ||| | |||||||||| |||||| | |||||||||||||||||||||||||||||| Sbjct: 14497181 cggcatgtcttggttgatgggaaggtcaggactgacaagacctaccctgctggtttcatg 14497240 Query: 367 g 367 | Sbjct: 14497241 g 14497241 Score = 121 bits (61), Expect = 3e-24 Identities = 82/89 (92%) Strand = Plus / Plus Query: 373 atttctattcccaagactggtgagaactacaggcttctgtatgacaccaagggccgcttc 432 ||||| ||||| |||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct: 14497353 atttccattccaaagactggtgagaactacaggcttctctatgacaccaagggtcgcttc 14497412 Query: 433 cgccttcactctgtcagggatgaggatgc 461 |||||||| || |||| |||||||||||| Sbjct: 14497413 cgccttcagtccgtcaaggatgaggatgc 14497441 Score = 101 bits (51), Expect = 2e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 464 agttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatcccatacctga 523 |||||||||| ||||| || ||||||||||||| || ||||||||||| || || |||| Sbjct: 14497540 agttcaagctttgcaaagttcggtctgtccagtttggacagaagggcattccctatctga 14497599 Query: 524 acacctatgatggccgcaccatccgctaccc 554 ||||||||||||| ||||||||||||||||| Sbjct: 14497600 acacctatgatggacgcaccatccgctaccc 14497630 Score = 63.9 bits (32), Expect = 5e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 112 aggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaag 171 ||||| |||||||||||||| |||||||||||||| || || |||||||| |||||| Sbjct: 14496878 aggggattgaagaagcatctcaagaggctcaatgcgcccaagcactggatgctcgacaag 14496937 Query: 172 cttggtggagcttttg 187 || || |||||||||| Sbjct: 14496938 ctcggcggagcttttg 14496953 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 80 cggcgacctagcccgagctcgcaaccatgg 109 ||||||| |||| ||||||||||||||||| Sbjct: 14496272 cggcgacgtagctcgagctcgcaaccatgg 14496301
>dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1359_D06 Length = 146805 Score = 161 bits (81), Expect = 3e-36 Identities = 156/181 (86%) Strand = Plus / Minus Query: 187 gcccccaagccatcatctggtcctcacaaggccagggaatgcctgcctctgatcctcatc 246 |||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 46801 gcccccaagccatcttctggtcctcacaagtccagggagtgcctgcctctgatcctcatt 46742 Query: 247 ctgaggaacagactgaaatatgctctcacgtaccgtgaagtgcaatctatccttatgcag 306 | |||||||| || || |||||||| || |||||||| || |||||||| |||||| Sbjct: 46741 atcaggaacaggctcaagtatgctctgacataccgtgaggttatttctatcctcatgcag 46682 Query: 307 cgtcatattatggttgatggaaaggtccgcactgacaagacctaccctgctggtttcatg 366 || ||| | |||||||||| |||||| | ||||||||||||||||| |||||||||||| Sbjct: 46681 cgccatgtcttggttgatggcaaggtcaggactgacaagacctacccagctggtttcatg 46622 Query: 367 g 367 | Sbjct: 46621 g 46621 Score = 129 bits (65), Expect = 1e-26 Identities = 86/93 (92%) Strand = Plus / Minus Query: 373 atttctattcccaagactggtgagaactacaggcttctgtatgacaccaagggccgcttc 432 ||||| || |||||||||||||||||||||||||||||||| ||||||||||| || ||| Sbjct: 46523 atttccatccccaagactggtgagaactacaggcttctgtacgacaccaagggacgtttc 46464 Query: 433 cgccttcactctgtcagggatgaggatgctaag 465 |||||||| ||||||| |||||||||||||||| Sbjct: 46463 cgccttcagtctgtcaaggatgaggatgctaag 46431 Score = 117 bits (59), Expect = 4e-23 Identities = 83/91 (91%) Strand = Plus / Minus Query: 464 agttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatcccatacctga 523 |||||||||| |||||||| ||||||| ||||| ||||||||||| ||||| ||||||| Sbjct: 46183 agttcaagctttgcaaggttcggtctgtgcagtttggccagaagggaatcccctacctga 46124 Query: 524 acacctatgatggccgcaccatccgctaccc 554 ||||||||||||| ||||||||||||||||| Sbjct: 46123 acacctatgatggtcgcaccatccgctaccc 46093 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Minus Query: 112 aggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaag 171 ||||||||||||||||||||||||||||||||||| || ||||||||||| |||||| Sbjct: 46980 aggggtttgaagaagcatctgaagaggctcaatgcgcccaagcattggatgctcgacaag 46921 Query: 172 cttggtggagcttttg 187 |||||||||||||||| Sbjct: 46920 cttggtggagcttttg 46905 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 76 agcacggcgacctagcccgagctcgcaaccatgg 109 |||||||||||||||||||| ||||||||||||| Sbjct: 47839 agcacggcgacctagcccgacctcgcaaccatgg 47806
>dbj|AP003275.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0514H03 Length = 167230 Score = 161 bits (81), Expect = 3e-36 Identities = 156/181 (86%) Strand = Plus / Plus Query: 187 gcccccaagccatcatctggtcctcacaaggccagggaatgcctgcctctgatcctcatc 246 |||||||||||||| ||||| ||||||||| |||||||||||||||| |||||||||||| Sbjct: 56374 gcccccaagccatcgtctggacctcacaagtccagggaatgcctgcccctgatcctcatc 56433 Query: 247 ctgaggaacagactgaaatatgctctcacgtaccgtgaagtgcaatctatccttatgcag 306 | |||||||| |||| ||||| || || |||||||| || |||||||| |||||| Sbjct: 56434 atcaggaacaggttgaagtatgcgctgacataccgtgaggttatctctatcctgatgcag 56493 Query: 307 cgtcatattatggttgatggaaaggtccgcactgacaagacctaccctgctggtttcatg 366 || ||| | |||||||||| |||||| | |||||||||||||||||||||||||||||| Sbjct: 56494 cggcatgtcttggttgatgggaaggtcaggactgacaagacctaccctgctggtttcatg 56553 Query: 367 g 367 | Sbjct: 56554 g 56554 Score = 121 bits (61), Expect = 3e-24 Identities = 82/89 (92%) Strand = Plus / Plus Query: 373 atttctattcccaagactggtgagaactacaggcttctgtatgacaccaagggccgcttc 432 ||||| ||||| |||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct: 56666 atttccattccaaagactggtgagaactacaggcttctctatgacaccaagggtcgcttc 56725 Query: 433 cgccttcactctgtcagggatgaggatgc 461 |||||||| || |||| |||||||||||| Sbjct: 56726 cgccttcagtccgtcaaggatgaggatgc 56754 Score = 101 bits (51), Expect = 2e-18 Identities = 81/91 (89%) Strand = Plus / Plus Query: 464 agttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatcccatacctga 523 |||||||||| ||||| || ||||||||||||| || ||||||||||| || || |||| Sbjct: 56853 agttcaagctttgcaaagttcggtctgtccagtttggacagaagggcattccctatctga 56912 Query: 524 acacctatgatggccgcaccatccgctaccc 554 ||||||||||||| ||||||||||||||||| Sbjct: 56913 acacctatgatggacgcaccatccgctaccc 56943 Score = 63.9 bits (32), Expect = 5e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 112 aggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaag 171 ||||| |||||||||||||| |||||||||||||| || || |||||||| |||||| Sbjct: 56191 aggggattgaagaagcatctcaagaggctcaatgcgcccaagcactggatgctcgacaag 56250 Query: 172 cttggtggagcttttg 187 || || |||||||||| Sbjct: 56251 ctcggcggagcttttg 56266 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 80 cggcgacctagcccgagctcgcaaccatgg 109 ||||||| |||| ||||||||||||||||| Sbjct: 55585 cggcgacgtagctcgagctcgcaaccatgg 55614
>emb|BX830139.1|CNS09ZZ0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB61ZG04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 737 Score = 135 bits (68), Expect = 2e-28 Identities = 194/236 (82%) Strand = Plus / Plus Query: 319 gttgatggaaaggtccgcactgacaagacctaccctgctggtttcatggacattatttct 378 |||||||| || ||| | || ||||||||||||||||||||||||||||| || | ||| Sbjct: 27 gttgatgggaaagtcaggacggacaagacctaccctgctggtttcatggatgttgtgtct 86 Query: 379 attcccaagactggtgagaactacaggcttctgtatgacaccaagggccgcttccgcctt 438 || |||||||| |||||||| | | ||||| ||||| |||||||| || ||||| || Sbjct: 87 atccccaagaccaatgagaacttccgtcttctctatgataccaagggacgtttccgtctc 146 Query: 439 cactctgtcagggatgaggatgctaagttcaagctctgcaaggtcaggtctgtccagttc 498 ||||| ||| ||||||||| || |||||||| || |||||||| | ||| ||||||| Sbjct: 147 cactccatcaaggatgaggaagcaaagttcaaactttgcaaggttcgatctatccagttt 206 Query: 499 ggccagaagggcatcccatacctgaacacctatgatggccgcaccatccgctaccc 554 || ||||| ||||| || ||||||||||| || ||||| ||||||||||| ||||| Sbjct: 207 ggacagaaaggcattccttacctgaacacttacgatggtcgcaccatccgttaccc 262
>gb|BT014201.1| Lycopersicon esculentum clone 133378R, mRNA sequence Length = 1292 Score = 129 bits (65), Expect = 1e-26 Identities = 344/437 (78%) Strand = Plus / Plus Query: 118 ttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggt 177 |||||||| ||| | |||||||||||||| || |||||||||||||| || || || Sbjct: 93 ttgaagaaacatttaaagaggctcaatgcgcctaagcattggatgcttgataaactcgga 152 Query: 178 ggagcttttgcccccaagccatcatctggtcctcacaaggccagggaatgcctgcctctg 237 || |||||||| |||||||| || |||||||| || || | |||||||| |||| || Sbjct: 153 ggtgcttttgctcccaagccttcttctggtccacataaatcaagggaatgtttgccattg 212 Query: 238 atcctcatcctgaggaacagactgaaatatgctctcacgtaccgtgaagtgcaatctatc 297 | | |||||||||||||| |||||||||| | ||||||||||| || |||||| Sbjct: 213 gttattatcctgaggaacaggttgaaatatgcgttgacgtaccgtgaggtcatttctatc 272 Query: 298 cttatgcagcgtcatattatggttgatggaaaggtccgcactgacaagacctaccctgct 357 | ||||| || || ||||||||||||| || || | || | ||||| ||||||||| Sbjct: 273 ttgatgcaacgccaagttatggttgatgggaaagttagaacaggtaagacttaccctgct 332 Query: 358 ggtttcatggacattatttctattcccaagactggtgagaactacaggcttctgtatgac 417 |||||||||||| || || ||||||| ||||| ||||| || | | ||||| |||||| Sbjct: 333 ggtttcatggacgttgttactattccaaagacgaatgagagcttccgacttctttatgac 392 Query: 418 accaagggccgcttccgccttcactctgtcagggatgaggatgctaagttcaagctctgc 477 || ||||| || ||||| || ||||| |||| |||||||| || |||||||| || ||| Sbjct: 393 actaagggtcggttccgtctacactcactcagagatgaggaagccaagttcaaactttgc 452 Query: 478 aaggtcaggtctgtccagttcggccagaagggcatcccatacctgaacacctatgatggc 537 ||||| | || || ||||| || |||||||| |||||||| || ||||| |||||||| Sbjct: 453 aaggttcgatcagtgcagtttggacagaagggtatcccatatctcaacacgtatgatgga 512 Query: 538 cgcaccatccgctaccc 554 | || ||||||||||| Sbjct: 513 agaacaatccgctaccc 529
>emb|BX833645.1|CNS0A1VP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL68ZB07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 984 Score = 115 bits (58), Expect = 2e-22 Identities = 307/390 (78%) Strand = Plus / Plus Query: 165 tgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaaggccaggga 224 |||||| |||||||| || || || ||||| ||||| ||||| ||||||||| | ||||| Sbjct: 58 tgacaaacttggtggtgccttcgctcccaaaccatcttctggacctcacaagtcgaggga 117 Query: 225 atgcctgcctctgatcctcatcctgaggaacagactgaaatatgctctcacgtaccgtga 284 || || ||||| |||| ||| | |||||||| |||| |||||| | || |||||||| Sbjct: 118 gtgtcttcctcttgtcctgatcatcaggaacaggttgaagtatgctttgacttaccgtga 177 Query: 285 agtgcaatctatccttatgcagcgtcatattatggttgatggaaaggtccgcactgacaa 344 ||| |||||| | ||||| | ||||| |||||||| || ||| | |||||||| Sbjct: 178 agttatctctatcttgatgcaaaggcatatccaagttgatggcaaagtcaggactgacaa 237 Query: 345 gacctaccctgctggtttcatggacattatttctattcccaagactggtgagaactacag 404 ||| |||||||||||||||||||| | | || | |||||||| |||||||| | | Sbjct: 238 gacttaccctgctggtttcatggatgtagtatccaaccccaagaccaatgagaacttccg 297 Query: 405 gcttctgtatgacaccaagggccgcttccgccttcactctgtcagggatgaggatgctaa 464 ||||| || ||||||||||| || ||||| | ||| | ||| ||||||||| || || Sbjct: 298 tcttctctacgacaccaagggacgtttccgtcaccaccccatcaaggatgaggaagcaaa 357 Query: 465 gttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatcccatacctgaa 524 ||||||||| |||||||| || | ||||||| || |||||||| |||||||||||||| Sbjct: 358 gttcaagctttgcaaggttagaaccatccagtttggtcagaagggaatcccatacctgaa 417 Query: 525 cacctatgatggccgcaccatccgctaccc 554 ||| ||||| || ||||||| ||| ||||| Sbjct: 418 cacttatgacggtcgcaccaaccgttaccc 447
>gb|AC104279.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1393_A07, complete sequence Length = 159932 Score = 111 bits (56), Expect = 2e-21 Identities = 71/76 (93%) Strand = Plus / Plus Query: 112 aggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaag 171 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 79426 aggggtttgaagaagcatctgaagaggctcaatgcccccagccattggatgcttgacaag 79485 Query: 172 cttggtggagcttttg 187 ||||||||||| |||| Sbjct: 79486 cttggtggagcatttg 79501 Score = 99.6 bits (50), Expect = 9e-18 Identities = 146/178 (82%) Strand = Plus / Plus Query: 190 cccaagccatcatctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctg 249 |||||||| || |||||||| ||||| || |||| ||| ||||| ||||||| ||||| Sbjct: 79760 cccaagccttcttctggtccccacaaagctcgggagtgcttgcctttgatccttatcctc 79819 Query: 250 aggaacagactgaaatatgctctcacgtaccgtgaagtgcaatctatccttatgcagcgt 309 |||||||| |||| |||||||| || |||||||| || || ||| | |||||||| Sbjct: 79820 aggaacaggttgaagtatgctctgacctaccgtgaggttatttccatcttgatgcagcgg 79879 Query: 310 catattatggttgatggaaaggtccgcactgacaagacctaccctgctggtttcatgg 367 ||| |||||||||||||||||||| | ||||||||||| || || ||||| ||||||| Sbjct: 79880 catgttatggttgatggaaaggtcaggactgacaagacttatccggctggattcatgg 79937 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 464 agttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatcccatacctga 523 |||||||||||||||||||| ||||||| ||||| || |||||||| || || | ||||| Sbjct: 80630 agttcaagctctgcaaggtccggtctgtacagtttggacagaagggtattcctttcctga 80689 Query: 524 acacctatgatggccgcaccatccgctacccagac 558 ||||| | || || ||||| ||||||||||||||| Sbjct: 80690 acaccaacgacgggcgcacgatccgctacccagac 80724 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 385 aagactggtgagaactacaggcttctgtatgacaccaagggccgcttccg 434 |||||||| ||||| | | | |||||||||||||||||||| |||||||| Sbjct: 80045 aagactggggagaatttccgccttctgtatgacaccaagggtcgcttccg 80094
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 111 bits (56), Expect = 2e-21 Identities = 71/76 (93%) Strand = Plus / Plus Query: 112 aggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaag 171 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 17549621 aggggtttgaagaagcatctgaagaggctcaatgcccccagccattggatgcttgacaag 17549680 Query: 172 cttggtggagcttttg 187 ||||||||||| |||| Sbjct: 17549681 cttggtggagcatttg 17549696 Score = 99.6 bits (50), Expect = 9e-18 Identities = 146/178 (82%) Strand = Plus / Plus Query: 190 cccaagccatcatctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctg 249 |||||||| || |||||||| ||||| || |||| ||| ||||| ||||||| ||||| Sbjct: 17549955 cccaagccttcttctggtccccacaaagctcgggagtgcttgcctttgatccttatcctc 17550014 Query: 250 aggaacagactgaaatatgctctcacgtaccgtgaagtgcaatctatccttatgcagcgt 309 |||||||| |||| |||||||| || |||||||| || || ||| | |||||||| Sbjct: 17550015 aggaacaggttgaagtatgctctgacctaccgtgaggttatttccatcttgatgcagcgg 17550074 Query: 310 catattatggttgatggaaaggtccgcactgacaagacctaccctgctggtttcatgg 367 ||| |||||||||||||||||||| | ||||||||||| || || ||||| ||||||| Sbjct: 17550075 catgttatggttgatggaaaggtcaggactgacaagacttatccggctggattcatgg 17550132 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 464 agttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatcccatacctga 523 |||||||||||||||||||| ||||||| ||||| || |||||||| || || | ||||| Sbjct: 17550825 agttcaagctctgcaaggtccggtctgtacagtttggacagaagggtattcctttcctga 17550884 Query: 524 acacctatgatggccgcaccatccgctacccagac 558 ||||| | || || ||||| ||||||||||||||| Sbjct: 17550885 acaccaacgacgggcgcacgatccgctacccagac 17550919 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 385 aagactggtgagaactacaggcttctgtatgacaccaagggccgcttccg 434 |||||||| ||||| | | | |||||||||||||||||||| |||||||| Sbjct: 17550240 aagactggggagaatttccgccttctgtatgacaccaagggtcgcttccg 17550289
>emb|BX818793.1|CNS0A8YY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB13ZG07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 966 Score = 105 bits (53), Expect = 2e-19 Identities = 174/213 (81%), Gaps = 1/213 (0%) Strand = Plus / Plus Query: 337 actgacaagacctaccctgctggtttcatggacattatttctattcccaagactgg-tga 395 ||||||||||| |||||||||||||||||||| || ||||||| ||||| || ||| Sbjct: 295 actgacaagacttaccctgctggtttcatggatgttgtttctatgcccaaaacaaaatga 354 Query: 396 gaactacaggcttctgtatgacaccaagggccgcttccgccttcactctgtcagggatga 455 ||||| | | ||| ||||||| |||||||| || ||||| || ||||| ||| |||||| Sbjct: 355 gaacttccgtcttttgtatgagaccaagggacgtttccgtctccactccatcaaggatga 414 Query: 456 ggatgctaagttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatccc 515 ||| |||||||||||||| ||||| || || || |||| || || |||||||| || || Sbjct: 415 ggaggctaagttcaagctttgcaaagtgagatcgatccaatttggtcagaagggtattcc 474 Query: 516 atacctgaacacctatgatggccgcaccatccg 548 ||| ||||||| ||| |||| ||||||||||| Sbjct: 475 ctacttgaacacatatcatggtcgcaccatccg 507 Score = 97.6 bits (49), Expect = 4e-17 Identities = 100/117 (85%) Strand = Plus / Plus Query: 100 gcaaccatggctaggggtttgaagaagcatctgaagaggctcaatgccccgtctcattgg 159 |||| |||||| || ||||||||||||||| |||||||||||||||| || |||||| Sbjct: 57 gcaaacatggcaagaggtttgaagaagcatttgaagaggctcaatgctcctaagcattgg 116 Query: 160 atgcttgacaagcttggtggagcttttgcccccaagccatcatctggtcctcacaag 216 |||||||| || |||||||| || |||||||||||||| || ||||| || |||||| Sbjct: 117 atgcttgataaacttggtggtgcctttgcccccaagccgtcttctgggccacacaag 173
>emb|BX831856.1|CNS09ZNQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH34ZE09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 934 Score = 99.6 bits (50), Expect = 9e-18 Identities = 176/218 (80%) Strand = Plus / Plus Query: 337 actgacaagacctaccctgctggtttcatggacattatttctattcccaagactggtgag 396 ||||| ||||| |||||||||||||||||||| || | || || |||||||| | || Sbjct: 230 actgagaagacttaccctgctggtttcatggatgttgtatccatccccaagaccaatcag 289 Query: 397 aactacaggcttctgtatgacaccaagggccgcttccgccttcactctgtcagggatgag 456 ||| | | ||| | || ||||||||||| || ||||| || |||| ||| ||||||| Sbjct: 290 cacttccgtcttttctacgacaccaagggacgtttccgtctcaactccatcaaggatgag 349 Query: 457 gatgctaagttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatccca 516 || || ||||||||||| ||||||| || ||| ||||||| || |||||||| || ||| Sbjct: 350 gaagcaaagttcaagcttcgcaaggttagatctatccagtttggtcagaagggaatgcca 409 Query: 517 tacctgaacacctatgatggccgcaccatccgctaccc 554 |||||| |||| |||||||| ||||||||||| ||||| Sbjct: 410 tacctgcacacttatgatggtcgcaccatccgttaccc 447 Score = 79.8 bits (40), Expect = 9e-12 Identities = 82/96 (85%) Strand = Plus / Plus Query: 121 aagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggtgga 180 |||||||||||||||||||||||||| || | ||||||||||||||| |||||||| Sbjct: 14 aagaagcatctgaagaggctcaatgctcctgagcgttggatgcttgacaaacttggtggt 73 Query: 181 gcttttgcccccaagccatcatctggtcctcacaag 216 || || || ||||| ||||| ||||| ||||||||| Sbjct: 74 gccttcgctcccaaaccatcttctggacctcacaag 109
>emb|AL163652.1|ATT28J14 Arabidopsis thaliana DNA chromosome 5, BAC clone T28J14 (ESSA project) Length = 104607 Score = 93.7 bits (47), Expect = 6e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 464 agttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatcccatacctga 523 |||||||||| |||||||| || ||| ||||||| || |||||||| || |||||||||| Sbjct: 7628 agttcaagctttgcaaggttagatctatccagtttggtcagaagggaattccatacctga 7687 Query: 524 acacctatgatggccgcaccatccgctaccc 554 |||| |||||||| ||||||||||| ||||| Sbjct: 7688 acacttatgatggtcgcaccatccgttaccc 7718 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 118 ttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggt 177 |||||||||||||| |||||||||||||| || ||||||||||||||||| |||||| Sbjct: 6994 ttgaagaagcatctaaagaggctcaatgctcctaagcattggatgcttgacaaacttggt 7053 Query: 178 gg 179 || Sbjct: 7054 gg 7055 Score = 60.0 bits (30), Expect = 8e-06 Identities = 141/178 (79%) Strand = Plus / Plus Query: 190 cccaagccatcatctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctg 249 ||||| ||||| ||||| ||||||||| | ||||| || || ||||| |||| ||| | Sbjct: 7174 cccaaaccatcttctggacctcacaagtcgagggagtgtcttcctcttgtcctgatcatc 7233 Query: 250 aggaacagactgaaatatgctctcacgtaccgtgaagtgcaatctatccttatgcagcgt 309 |||||||| |||| |||||| | || ||||||||||| |||||| | ||||| | Sbjct: 7234 aggaacaggttgaagtatgctttgacttaccgtgaagttatctctatcttgatgcaaagg 7293 Query: 310 catattatggttgatggaaaggtccgcactgacaagacctaccctgctggtttcatgg 367 ||||| |||||||| || ||| | ||||||||||| ||||||||||||||||||| Sbjct: 7294 catatccaagttgatggcaaagtcaggactgacaagacttaccctgctggtttcatgg 7351
>emb|BX824247.1|CNS0A6X1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH32ZH05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1168 Score = 93.7 bits (47), Expect = 6e-16 Identities = 80/91 (87%) Strand = Plus / Minus Query: 464 agttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatcccatacctga 523 |||||||||| |||||||| || ||| ||||||| || |||||||| || |||||||||| Sbjct: 622 agttcaagctttgcaaggttagatctatccagtttggtcagaagggaattccatacctga 563 Query: 524 acacctatgatggccgcaccatccgctaccc 554 |||| |||||||| ||||||||||| ||||| Sbjct: 562 acacttatgatggtcgcaccatccgttaccc 532 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 319 gttgatggaaaggtccgcactgacaagacctaccctgctggtttcatgg 367 |||||||| || ||| | ||||||||||| ||||||||||||||||||| Sbjct: 947 gttgatggcaaagtcaggactgacaagacttaccctgctggtttcatgg 899
>dbj|AB010697.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MOJ9 Length = 86380 Score = 93.7 bits (47), Expect = 6e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 464 agttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatcccatacctga 523 |||||||||| |||||||| || ||| ||||||| || |||||||| || |||||||||| Sbjct: 82351 agttcaagctttgcaaggttagatctatccagtttggtcagaagggaattccatacctga 82410 Query: 524 acacctatgatggccgcaccatccgctaccc 554 |||| |||||||| ||||||||||| ||||| Sbjct: 82411 acacttatgatggtcgcaccatccgttaccc 82441 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 118 ttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagcttggt 177 |||||||||||||| |||||||||||||| || ||||||||||||||||| |||||| Sbjct: 81717 ttgaagaagcatctaaagaggctcaatgctcctaagcattggatgcttgacaaacttggt 81776 Query: 178 gg 179 || Sbjct: 81777 gg 81778 Score = 60.0 bits (30), Expect = 8e-06 Identities = 141/178 (79%) Strand = Plus / Plus Query: 190 cccaagccatcatctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctg 249 ||||| ||||| ||||| ||||||||| | ||||| || || ||||| |||| ||| | Sbjct: 81897 cccaaaccatcttctggacctcacaagtcgagggagtgtcttcctcttgtcctgatcatc 81956 Query: 250 aggaacagactgaaatatgctctcacgtaccgtgaagtgcaatctatccttatgcagcgt 309 |||||||| |||| |||||| | || ||||||||||| |||||| | ||||| | Sbjct: 81957 aggaacaggttgaagtatgctttgacttaccgtgaagttatctctatcttgatgcaaagg 82016 Query: 310 catattatggttgatggaaaggtccgcactgacaagacctaccctgctggtttcatgg 367 ||||| |||||||| || ||| | ||||||||||| ||||||||||||||||||| Sbjct: 82017 catatccaagttgatggcaaagtcaggactgacaagacttaccctgctggtttcatgg 82074
>dbj|AB025632.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQJ2 Length = 51440 Score = 79.8 bits (40), Expect = 9e-12 Identities = 115/140 (82%) Strand = Plus / Plus Query: 319 gttgatggaaaggtccgcactgacaagacctaccctgctggtttcatggacattatttct 378 |||||||| || ||| | || ||||||||||||||||||||||||||||| || | ||| Sbjct: 6260 gttgatgggaaagtcaggacggacaagacctaccctgctggtttcatggatgttgtgtct 6319 Query: 379 attcccaagactggtgagaactacaggcttctgtatgacaccaagggccgcttccgcctt 438 || |||||||| |||||||| | | ||||| ||||| |||||||| || ||||| || Sbjct: 6320 atccccaagaccaatgagaacttccgtcttctctatgataccaagggacgtttccgtctc 6379 Query: 439 cactctgtcagggatgagga 458 ||||| ||| ||||||||| Sbjct: 6380 cactccatcaaggatgagga 6399 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 112 aggggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaag 171 ||||||||||||||||||||||||||||| ||||| || ||||||||||||||||| Sbjct: 5950 aggggtttgaagaagcatctgaagaggcttaatgcgcctaagcattggatgcttgacaaa 6009 Query: 172 cttggtgg 179 |||||||| Sbjct: 6010 cttggtgg 6017 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 464 agttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatcccatacctga 523 ||||||| || |||||||| | ||| ||||||| || ||||| ||||| || ||||||| Sbjct: 6504 agttcaaactttgcaaggttcgatctatccagtttggacagaaaggcattccttacctga 6563 Query: 524 acacctatgatggccgcaccatccgctaccc 554 |||| || ||||| ||||||||||| ||||| Sbjct: 6564 acacttacgatggtcgcaccatccgttaccc 6594
>gb|AC146554.5| Medicago truncatula clone mth2-9l7, complete sequence Length = 135334 Score = 73.8 bits (37), Expect = 5e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 187 gcccccaagccatcatctggtcctcacaaggccagggaatgcctgcctctgatcctcatc 246 ||||| ||||| |||||||| || ||||| | ||||| ||||| ||| ||||||| ||| Sbjct: 11566 gccccaaagccgtcatctggaccacacaaatctagggagtgccttcctttgatccttatc 11507 Query: 247 ctgaggaacagactgaaatatgctctcac 275 ||||||||||||| |||||||||||||| Sbjct: 11506 ttgaggaacagactaaaatatgctctcac 11478 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 115 ggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagctt 174 ||||||||||| ||| ||||| |||||||||| || |||||||||||||| |||||| Sbjct: 11737 ggtttgaagaaacatttgaagcggctcaatgctccaaaacattggatgcttgataagctt 11678 Query: 175 ggtgg 179 ||||| Sbjct: 11677 ggtgg 11673 Score = 48.1 bits (24), Expect = 0.031 Identities = 72/88 (81%) Strand = Plus / Minus Query: 464 agttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatcccatacctga 523 |||| ||||| |||||||| | ||||| ||||| || ||||| || || || || |||| Sbjct: 10980 agtttaagctttgcaaggtacgatctgttcagtttggtcagaaagggataccctatctga 10921 Query: 524 acacctatgatggccgcaccatccgcta 551 ||||||||||||| || || |||||||| Sbjct: 10920 acacctatgatgggcgtacaatccgcta 10893 Score = 40.1 bits (20), Expect = 7.6 Identities = 65/80 (81%) Strand = Plus / Minus Query: 376 tctattcccaagactggtgagaactacaggcttctgtatgacaccaagggccgcttccgc 435 |||||||||||||| ||| |||| | | ||||| |||||||| || || || ||||| Sbjct: 11199 tctattcccaagaccaatgaaaacttccgtcttctctatgacacaaaaggtcgattccgt 11140 Query: 436 cttcactctgtcagggatga 455 || |||||||| |||||||| Sbjct: 11139 ctccactctgtaagggatga 11120
>gb|AC126779.19| Medicago truncatula clone mth2-34m14, complete sequence Length = 128856 Score = 73.8 bits (37), Expect = 5e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 502 cagaagggcatcccatacctgaacacctatgatggccgcaccatccgctaccc 554 ||||| || |||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 83342 cagaaaggtatcccatacctgaacacctatgatggtcgcactatccgctaccc 83394 Score = 73.8 bits (37), Expect = 5e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 115 ggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagctt 174 ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| | Sbjct: 82054 ggtttgaagaagcatttgaagaggctcaatgcccccaagcattggatgcttgacaaattg 82113 Query: 175 ggtggagcttttg 187 ||||| ||||||| Sbjct: 82114 ggtggtgcttttg 82126 Score = 50.1 bits (25), Expect = 0.008 Identities = 73/89 (82%) Strand = Plus / Plus Query: 199 tcatctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacaga 258 |||||||| || |||||| |||||||||| || || || || || ||| || | |||||| Sbjct: 82227 tcatctggaccacacaagtccagggaatgtctcccactcattctgatcttgcgaaacaga 82286 Query: 259 ctgaaatatgctctcacgtaccgtgaagt 287 |||| |||||||| || ||||||||||| Sbjct: 82287 ttgaagtatgctctaacataccgtgaagt 82315 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 409 ctgtatgacaccaagggccgcttccgccttcactctgtcagggatga 455 |||||||||||||||||||| ||||| || || || ||||| ||||| Sbjct: 82893 ctgtatgacaccaagggccgtttccgtctccattcagtcagagatga 82939
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 295 atccttatgcagcgtcatattatggttgatggaaaggtccgcactgacaagacctaccct 354 ||||| |||||||||||| ||| |||||| || |||||| | ||||||| |||||||| Sbjct: 23697 atcctaatgcagcgtcatgttaaggttgacggtaaggtcagaactgacactacctaccca 23638 Query: 355 gctggtttcatgga 368 |||||||||||||| Sbjct: 23637 gctggtttcatgga 23624
>ref|NM_209058.1| Eremothecium gossypii ADL391Cp (ADL391C), mRNA Length = 786 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 295 atccttatgcagcgtcatattatggttgatggaaaggtccgcactgacaagacctaccct 354 ||||| |||||||||||| ||| |||||| || |||||| | ||||||| |||||||| Sbjct: 190 atcctaatgcagcgtcatgttaaggttgacggtaaggtcagaactgacactacctaccca 249 Query: 355 gctggtttcatgga 368 |||||||||||||| Sbjct: 250 gctggtttcatgga 263
>gb|AC002329.2|AC002329 Arabidopsis thaliana chromosome II section 100 of 255 of the complete sequence. Sequence from clones T23A1, F5J6, MJB20 Length = 76170 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 115 ggtttgaagaagcatctgaagaggctcaatgccccgtctcattggatgcttgacaagctt 174 ||||||||||||||| |||||||||||||||| || |||||||||||||| || ||| Sbjct: 47817 ggtttgaagaagcatttgaagaggctcaatgctcctaagcattggatgcttgataaactt 47876 Query: 175 ggtgg 179 ||||| Sbjct: 47877 ggtgg 47881 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 337 actgacaagacctaccctgctggtttcatgg 367 ||||||||||| ||||||||||||||||||| Sbjct: 48122 actgacaagacttaccctgctggtttcatgg 48152 Score = 50.1 bits (25), Expect = 0.008 Identities = 70/85 (82%) Strand = Plus / Plus Query: 464 agttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatcccatacctga 523 |||||||||| ||||| || || || |||| || || |||||||| || || ||| ||| Sbjct: 48528 agttcaagctttgcaaagtgagatcgatccaatttggtcagaagggtattccctacttga 48587 Query: 524 acacctatgatggccgcaccatccg 548 |||| |||||||| ||||||||||| Sbjct: 48588 acacatatgatggtcgcaccatccg 48612 Score = 50.1 bits (25), Expect = 0.008 Identities = 61/73 (83%) Strand = Plus / Plus Query: 393 tgagaactacaggcttctgtatgacaccaagggccgcttccgccttcactctgtcaggga 452 |||||||| | | ||| |||||||||||||||| || ||||| || ||||| ||| ||| Sbjct: 48293 tgagaacttccgtcttttgtatgacaccaagggacgtttccgtctccactccatcaagga 48352 Query: 453 tgaggatgctaag 465 |||||| |||||| Sbjct: 48353 tgaggaggctaag 48365
>emb|AL583828.4| Human DNA sequence from clone RP11-501I19 on chromosome 6 Contains a novel gene (ortholog of human ADG-90), the 5' end of a novel gene (FLJ20330), a novel gene, a ribosomal protein s4x (Rps4x) pseudogene and three CpG islands, complete sequence Length = 124659 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 322 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 368 ||||| |||||||| |||||||| |||||||||||||| |||||||| Sbjct: 77167 gatggcaaggtccgaactgacaaaacctaccctgctggattcatgga 77213
>emb|BX829418.1|CNS09ZZ4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB12ZD07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 566 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 464 agttcaagctctgcaaggtcaggtctgtccagttcggccagaagggcatcccatacctga 523 ||||||| || |||||||| | ||| ||||||| || ||||| ||||| || ||||||| Sbjct: 1 agttcaaactttgcaaggttcgatctatccagtttggacagaaaggcattccttacctga 60 Query: 524 acacctatgatggccgcaccatccgctaccc 554 |||| || ||||| ||||||||||| ||||| Sbjct: 61 acacttacgatggtcgcaccatccgttaccc 91
>gb|AC010305.3|AC010305 Homo sapiens chromosome 16 clone CTB-45A8, complete sequence Length = 121575 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 322 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 368 ||||| |||||||| |||||||| |||||||||||||| |||||||| Sbjct: 38935 gatggcaaggtccgaactgacaaaacctaccctgctggattcatgga 38889
>ref|XM_986316.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X isoform (LOC229746), mRNA Length = 908 Score = 60.0 bits (30), Expect = 8e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 203 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 262 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 126 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 185 Query: 263 aatatg 268 |||||| Sbjct: 186 aatatg 191
>ref|XM_124146.6| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X isoform (LOC229746), mRNA Length = 908 Score = 60.0 bits (30), Expect = 8e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 203 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 262 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 126 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 185 Query: 263 aatatg 268 |||||| Sbjct: 186 aatatg 191
>gb|AC131731.4| Mus musculus BAC clone RP23-117K10 from 3, complete sequence Length = 200232 Score = 60.0 bits (30), Expect = 8e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 203 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 262 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 17770 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 17829 Query: 263 aatatg 268 |||||| Sbjct: 17830 aatatg 17835
>gb|AC140323.3| Mus musculus BAC clone RP24-325G15 from 3, complete sequence Length = 182942 Score = 60.0 bits (30), Expect = 8e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 203 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 262 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 175838 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 175897 Query: 263 aatatg 268 |||||| Sbjct: 175898 aatatg 175903
>gb|AY769318.1| Bombyx mori ribosomal protein S4 (RpS4) mRNA, complete cds Length = 908 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 530 atgatggccgcaccatccgctacccagac 558 ||||||||||||||||||||||||||||| Sbjct: 493 atgatggccgcaccatccgctacccagac 521
>ref|XM_657306.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4794.2), mRNA Length = 720 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 328 aaggtccgcactgacaagacctaccctgctggtttcatgga 368 ||||||||||||||| |||||||||||| ||||||||||| Sbjct: 157 aaggtccgcactgacccgacctaccctgccggtttcatgga 197
>ref|XM_536580.2| PREDICTED: Canis familiaris ribosomal protein S4, transcript variant 1 (RPS4), mRNA Length = 865 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 300 tatgcagcgtcatattatggttgatggaaaggtccgcactgacaagacctaccctgctgg 359 |||||||||| ||||| | ||||||| |||||||| ||||| | |||||||||||||| Sbjct: 206 tatgcagcgttttattaagattgatggcaaggtccgaactgatatcacctaccctgctgg 265 Query: 360 tttcatgga 368 ||| ||||| Sbjct: 266 ttttatgga 274
>ref|XM_844428.1| PREDICTED: Canis familiaris ribosomal protein S4, transcript variant 2 (RPS4), mRNA Length = 1129 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 300 tatgcagcgtcatattatggttgatggaaaggtccgcactgacaagacctaccctgctgg 359 |||||||||| ||||| | ||||||| |||||||| ||||| | |||||||||||||| Sbjct: 470 tatgcagcgttttattaagattgatggcaaggtccgaactgatatcacctaccctgctgg 529 Query: 360 tttcatgga 368 ||| ||||| Sbjct: 530 ttttatgga 538
>ref|XM_537399.2| PREDICTED: Canis familiaris similar to 40S ribosomal protein S4, X isoform (LOC480276), mRNA Length = 854 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 300 tatgcagcgtcatattatggttgatggaaaggtccgcactgacaagacctaccctgctgg 359 |||||||||| ||||| | ||||||| |||||||| ||||| | |||||||||||||| Sbjct: 214 tatgcagcgttttattaagattgatggcaaggtccgaactgatataacctaccctgctgg 273 Query: 360 tttcatgga 368 ||| ||||| Sbjct: 274 ttttatgga 282
>gb|U22232.1|FCU22232 Felis domesticus ribosomal protein S4 mRNA, partial cds Length = 853 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 300 tatgcagcgtcatattatggttgatggaaaggtccgcactgacaagacctaccctgctgg 359 |||||||||| ||||| | ||||||| |||||||| ||||| | |||||||||||||| Sbjct: 192 tatgcagcgttttattaagattgatggcaaggtccgaactgatataacctaccctgctgg 251 Query: 360 tttcatgga 368 ||| ||||| Sbjct: 252 ttttatgga 260
>dbj|D50108.1| Canis familiaris mRNA for ribosomal protein S4, partial cds Length = 581 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 300 tatgcagcgtcatattatggttgatggaaaggtccgcactgacaagacctaccctgctgg 359 |||||||||| ||||| | ||||||| |||||||| ||||| | |||||||||||||| Sbjct: 138 tatgcagcgttttattaagattgatggcaaggtccgaactgatatcacctaccctgctgg 197 Query: 360 tttcatgga 368 ||| ||||| Sbjct: 198 ttttatgga 206
>dbj|D50106.1| Felis catus mRNA for ribosomal protein S4, partial cds Length = 581 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 300 tatgcagcgtcatattatggttgatggaaaggtccgcactgacaagacctaccctgctgg 359 |||||||||| ||||| | ||||||| |||||||| ||||| | |||||||||||||| Sbjct: 138 tatgcagcgttttattaagattgatggcaaggtccgaactgatataacctaccctgctgg 197 Query: 360 tttcatgga 368 ||| ||||| Sbjct: 198 ttttatgga 206
>gb|BC106152.1| Mus musculus ribosomal protein S4, X-linked, mRNA (cDNA clone MGC:118104 IMAGE:3669367), complete cds Length = 917 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 203 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 262 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 105 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 164 Query: 263 aatatgc 269 | ||||| Sbjct: 165 agtatgc 171
>gb|BC009100.1| Mus musculus ribosomal protein S4, X-linked, mRNA (cDNA clone MGC:6575 IMAGE:3482299), complete cds Length = 925 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 203 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 262 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 129 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 188 Query: 263 aatatgc 269 | ||||| Sbjct: 189 agtatgc 195
>ref|NM_009094.1| Mus musculus ribosomal protein S4, X-linked (Rps4x), mRNA Length = 885 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 203 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 262 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 104 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 163 Query: 263 aatatgc 269 | ||||| Sbjct: 164 agtatgc 170
>ref|XR_002810.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X isoform (LOC670119), mRNA Length = 962 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 203 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 262 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 115 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 174 Query: 263 aatatgc 269 | ||||| Sbjct: 175 agtatgc 181
>ref|XR_004627.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X isoform (LOC674228), mRNA Length = 959 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 203 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 262 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 115 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 174 Query: 263 aatatgc 269 | ||||| Sbjct: 175 agtatgc 181
>ref|XR_002019.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X isoform (LOC667398), mRNA Length = 962 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 203 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 262 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 115 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 174 Query: 263 aatatgc 269 | ||||| Sbjct: 175 agtatgc 181
>ref|XM_001004419.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X isoform, transcript variant 2 (LOC668668), mRNA Length = 876 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 203 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 262 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 110 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 169 Query: 263 aatatgc 269 | ||||| Sbjct: 170 agtatgc 176
>ref|XM_001004416.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X isoform, transcript variant 1 (LOC668668), mRNA Length = 829 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 203 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 262 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 123 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 182 Query: 263 aatatgc 269 | ||||| Sbjct: 183 agtatgc 189
>ref|XM_916606.2| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X isoform, transcript variant 1 (LOC637070), mRNA Length = 888 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 203 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 262 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 123 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 182 Query: 263 aatatgc 269 | ||||| Sbjct: 183 agtatgc 189
>gb|AC122379.4| Mus musculus BAC clone RP23-476A7 from chromosome 13, complete sequence Length = 171737 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 203 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 262 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 23328 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 23387 Query: 263 aatatgc 269 | ||||| Sbjct: 23388 agtatgc 23394
>gb|AC102561.4| Mus musculus chromosome 7, clone RP23-201O19, complete sequence Length = 195549 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 203 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 262 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 117114 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 117055 Query: 263 aatatgc 269 | ||||| Sbjct: 117054 agtatgc 117048
>emb|AL133396.2| Human DNA sequence from clone RP5-1068H6 on chromosome 20p12.1-13 Contains part of a ribosomal protein S4 pseudogene, the PRNP gene for prion protein (p27-30) (Creutzfeld-Jakob disease, Gerstmann-Strausler-Scheinker syndrome, fatal familial insomnia), the PRND gene for prion protein 2 (dublet), a novel gene, an isopentenyl-diphosphate delta isomerase 1 (IDI1) pseudogene and two CpG islands, complete sequence Length = 148497 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 322 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 368 ||||| |||||||||||||| | |||||||||||||| |||||||| Sbjct: 396 gatggcaaggtccgcactgatataacctaccctgctggattcatgga 350
>gb|AF402812.1| Ictalurus punctatus 40S ribosomal protein S4 mRNA, complete cds Length = 861 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 322 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 368 ||||| |||||||||||||||| |||||||||||||| || ||||| Sbjct: 225 gatggcaaggtccgcactgacatcacctaccctgctggatttatgga 271
>dbj|AK135369.1| Mus musculus 12 days embryo female mullerian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6820407G10 product:ribosomal protein S4, X-linked, full insert sequence Length = 907 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 203 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 262 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 125 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 184 Query: 263 aatatgc 269 | ||||| Sbjct: 185 agtatgc 191
>dbj|AK153211.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830127J02 product:ribosomal protein S4, X-linked, full insert sequence Length = 897 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 203 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 262 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 116 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 175 Query: 263 aatatgc 269 | ||||| Sbjct: 176 agtatgc 182
>dbj|AK010921.1| Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:2510006L12 product:RIBOSOMAL PROTEIN S4X homolog [Cercopithecus aethiops], full insert sequence Length = 903 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 203 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 262 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 122 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 181 Query: 263 aatatgc 269 | ||||| Sbjct: 182 agtatgc 188
>dbj|AK010676.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410045N08 product:RIBOSOMAL PROTEIN S4X homolog [Cercopithecus aethiops], full insert sequence Length = 898 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 203 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 262 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 122 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 181 Query: 263 aatatgc 269 | ||||| Sbjct: 182 agtatgc 188
>dbj|AK010624.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410030O13 product:ribosomal protein S4, X-linked, full insert sequence Length = 906 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 203 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 262 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 125 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 184 Query: 263 aatatgc 269 | ||||| Sbjct: 185 agtatgc 191
>dbj|AK088410.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430016A18 product:RIBOSOMAL PROTEIN S4X homolog [Cercopithecus aethiops], full insert sequence Length = 898 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 203 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 262 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 122 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 181 Query: 263 aatatgc 269 | ||||| Sbjct: 182 agtatgc 188
>dbj|AK002445.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610010B10 product:ribosomal protein S4, X-linked, full insert sequence Length = 903 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 203 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 262 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 122 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 181 Query: 263 aatatgc 269 | ||||| Sbjct: 182 agtatgc 188
>dbj|AK012429.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700054P13 product:RIBOSOMAL PROTEIN S4X homolog [Cercopithecus aethiops], full insert sequence Length = 902 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 203 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 262 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 122 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 181 Query: 263 aatatgc 269 | ||||| Sbjct: 182 agtatgc 188
>ref|NG_000950.1| Homo sapiens ribosomal protein S4-like 2 (RPS4L2) pseudogene on chromosome 20 Length = 712 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 322 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 368 ||||| |||||||||||||| | |||||||||||||| |||||||| Sbjct: 317 gatggcaaggtccgcactgatataacctaccctgctggattcatgga 363
>dbj|AK014210.1| Mus musculus 13 days embryo head cDNA, RIKEN full-length enriched library, clone:3110053C10 product:ribosomal protein S4, X-linked, full insert sequence Length = 901 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 203 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 262 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 120 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 179 Query: 263 aatatgc 269 | ||||| Sbjct: 180 agtatgc 186
>gb|AC027653.3| Mus musculus strain C57BL6/J chromosome 5 clone RP23-166J14, complete sequence Length = 174990 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 203 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 262 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 83378 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 83319 Query: 263 aatatgc 269 | ||||| Sbjct: 83318 agtatgc 83312
>gb|AC124744.3| Mus musculus BAC clone RP23-223E16 from 13, complete sequence Length = 199767 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 203 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 262 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 16416 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 16357 Query: 263 aatatgc 269 | ||||| Sbjct: 16356 agtatgc 16350
>gb|BC089349.1| Mus musculus cDNA clone MGC:102174 IMAGE:6819603, complete cds Length = 909 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 203 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 262 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 107 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 166 Query: 263 aatatgc 269 | ||||| Sbjct: 167 agtatgc 173
>dbj|D11087.1|HAMRPS4 Mesocricetus sp. RPS4 mRNA for ribosomal protein S4, complete cds Length = 970 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 203 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 262 |||| ||||||||| |||||||| |||||||||||| | |||||||||||||||| | Sbjct: 119 ctggccctcacaagctgagggaatgtctgcctctgatcattttcctgaggaacagactta 178 Query: 263 aatatgc 269 | ||||| Sbjct: 179 agtatgc 185 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 tatgacaccaagggccgctt 431 |||||||||||||||||||| Sbjct: 328 tatgacaccaagggccgctt 347
>emb|AL954850.12| Mouse DNA sequence from clone RP23-331B22 on chromosome X, complete sequence Length = 146713 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 203 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 262 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 7666 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 7607 Query: 263 aatatgc 269 | ||||| Sbjct: 7606 agtatgc 7600
>gb|BC089348.1| Mus musculus cDNA clone IMAGE:5709768, containing frame-shift errors Length = 919 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 203 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 262 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 107 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 166 Query: 263 aatatgc 269 | ||||| Sbjct: 167 agtatgc 173
>gb|M73436.1|MUSRSP4 Mouse ribosomal protein S4 (Rps4) mRNA, complete CDS Length = 885 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 203 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 262 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 104 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagactta 163 Query: 263 aatatgc 269 | ||||| Sbjct: 164 agtatgc 170
>gb|BC086560.1| Rattus norvegicus ribosomal protein S4, X-linked, mRNA (cDNA clone MGC:105788 IMAGE:7303578), complete cds Length = 915 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 220 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgc 269 ||||||||||||||||||||| | |||| ||||||||||| || ||||| Sbjct: 115 agggaatgcctgcctctgatcattttcctaaggaacagacttaagtatgc 164
>ref|XR_004017.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X isoform (LOC434180), mRNA Length = 892 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 203 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagact 260 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||||| Sbjct: 124 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacagact 181
>ref|XM_749829.1| Aspergillus fumigatus Af293 cytosolic small ribosomal subunit S4 (Afu3g06840) partial mRNA Length = 786 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 328 aaggtccgcactgacaagacctaccctgctggtttcatggac 369 ||||||||||||||| |||||||| ||||||||||||||| Sbjct: 223 aaggtccgcactgaccctacctaccccgctggtttcatggac 264
>emb|BX832133.1|CNS09ZP1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH53ZH10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 537 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 493 cagttcggccagaagggcatcccatacctgaacacctatgatggccgcaccatccgctac 552 ||||| || ||||| ||||| || ||||||||||| || ||||| ||||||||||| ||| Sbjct: 1 cagtttggacagaaaggcattccttacctgaacacttacgatggtcgcaccatccgttac 60 Query: 553 cc 554 || Sbjct: 61 cc 62
>ref|NM_001007600.1| Rattus norvegicus ribosomal protein S4, X-linked (Rps4x), mRNA Length = 915 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 220 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgc 269 ||||||||||||||||||||| | |||| ||||||||||| || ||||| Sbjct: 115 agggaatgcctgcctctgatcattttcctaaggaacagacttaagtatgc 164
>emb|X14210.1|RNRPS4 Rat mRNA for ribosomal protein S4 Length = 907 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 220 agggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgc 269 ||||||||||||||||||||| | |||| ||||||||||| || ||||| Sbjct: 136 agggaatgcctgcctctgatcattttcctaaggaacagacttaagtatgc 185
>ref|XM_509549.1| PREDICTED: Pan troglodytes similar to 40S ribosomal protein S4, X isoform (LOC452446), mRNA Length = 535 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 320 ttgatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 368 ||||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 146 ttgatggcaaggtccgaactgatataacctaccctgctgggttcatgga 194
>ref|XM_865957.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S4, X isoform (LOC614449), mRNA Length = 828 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 320 ttgatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 368 ||||||| || ||||||||||| | ||||||||||||||||| ||||| Sbjct: 226 ttgatggcaaagtccgcactgatataacctaccctgctggttttatgga 274
>gb|AY389948.1| Protopterus dolloi ribosomal protein S4 mRNA, partial cds Length = 715 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 320 ttgatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 368 ||||||| ||||||||||| |||| ||||| ||| ||||||||||||| Sbjct: 186 ttgatggtaaggtccgcaccgacatcacctatccttctggtttcatgga 234
>gb|AC024780.1| Caenorhabditis elegans cosmid Y43B11AR, complete sequence Length = 15768 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 466 ttcaagctctgcaaggtcaggtctgtcc 493 ||||||||||||||||||| |||||||| Sbjct: 13581 ttcaagctctgcaaggtcaagtctgtcc 13554 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 538 cgcaccatccgctacccagac 558 ||||||||||||||||||||| Sbjct: 13509 cgcaccatccgctacccagac 13489
>ref|XR_003920.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X isoform (LOC635803), mRNA Length = 788 Score = 48.1 bits (24), Expect = 0.031 Identities = 45/52 (86%) Strand = Plus / Plus Query: 221 gggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgctct 272 |||||||||||||| ||||| | |||| ||||||||||| || |||||||| Sbjct: 116 gggaatgcctgcctatgatcattttcctaaggaacagacttaagtatgctct 167
>ref|XR_002186.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X isoform (LOC635803), mRNA Length = 788 Score = 48.1 bits (24), Expect = 0.031 Identities = 45/52 (86%) Strand = Plus / Plus Query: 221 gggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgctct 272 |||||||||||||| ||||| | |||| ||||||||||| || |||||||| Sbjct: 116 gggaatgcctgcctatgatcattttcctaaggaacagacttaagtatgctct 167
>ref|XM_446360.1| Candida glabrata CBS138, CAGL0F09031g partial mRNA Length = 786 Score = 48.1 bits (24), Expect = 0.031 Identities = 57/68 (83%) Strand = Plus / Plus Query: 301 atgcagcgtcatattatggttgatggaaaggtccgcactgacaagacctaccctgctggt 360 ||||| |||||| ||| |||||| || |||||| | |||||| |||||||| |||||| Sbjct: 196 atgcaacgtcatgttaaggttgacggtaaggtcagaactgacgctacctacccagctggt 255 Query: 361 ttcatgga 368 |||||||| Sbjct: 256 ttcatgga 263
>emb|CR380952.1| Candida glabrata strain CBS138 chromosome F complete sequence Length = 927101 Score = 48.1 bits (24), Expect = 0.031 Identities = 57/68 (83%) Strand = Plus / Minus Query: 301 atgcagcgtcatattatggttgatggaaaggtccgcactgacaagacctaccctgctggt 360 ||||| |||||| ||| |||||| || |||||| | |||||| |||||||| |||||| Sbjct: 886108 atgcaacgtcatgttaaggttgacggtaaggtcagaactgacgctacctacccagctggt 886049 Query: 361 ttcatgga 368 |||||||| Sbjct: 886048 ttcatgga 886041
>emb|CR609307.1| full-length cDNA clone CS0DH003YG13 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 798 Score = 48.1 bits (24), Expect = 0.031 Identities = 48/56 (85%) Strand = Plus / Plus Query: 313 attatggttgatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 368 |||| ||||||||| ||||| || ||||| | |||||||||||||| |||||||| Sbjct: 203 attaaggttgatggcaaggtacgaactgatataacctaccctgctggattcatgga 258
>gb|AC008925.4| Homo sapiens chromosome 5 clone CTD-2284O10, complete sequence Length = 131990 Score = 48.1 bits (24), Expect = 0.031 Identities = 48/56 (85%) Strand = Plus / Plus Query: 313 attatggttgatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 368 |||| ||||||||| ||||| || ||||| | |||||||||||||| |||||||| Sbjct: 49760 attaaggttgatggcaaggtacgaactgatataacctaccctgctggattcatgga 49815
>ref|NM_068702.2| Caenorhabditis elegans Ribosomal Protein, Small subunit family member (rps-4) (rps-4) mRNA, complete cds Length = 845 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 466 ttcaagctctgcaaggtcaggtctgtcc 493 ||||||||||||||||||| |||||||| Sbjct: 381 ttcaagctctgcaaggtcaagtctgtcc 408 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 538 cgcaccatccgctacccagac 558 ||||||||||||||||||||| Sbjct: 453 cgcaccatccgctacccagac 473
>gb|AC137755.5| Mus musculus chromosome 1, clone RP24-279G1, complete sequence Length = 153471 Score = 48.1 bits (24), Expect = 0.031 Identities = 48/56 (85%) Strand = Plus / Minus Query: 203 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacaga 258 |||||||||||||| ||||||||| ||||||||||| | |||| ||||||||| Sbjct: 31001 ctggtcctcacaagctgagggaatgcttgcctctgatcattttcctaaggaacaga 30946
>emb|BX539316.6| Mouse DNA sequence from clone RP24-216F23 on chromosome 7, complete sequence Length = 178673 Score = 48.1 bits (24), Expect = 0.031 Identities = 45/52 (86%) Strand = Plus / Plus Query: 221 gggaatgcctgcctctgatcctcatcctgaggaacagactgaaatatgctct 272 |||||||||||||| ||||| | |||| ||||||||||| || |||||||| Sbjct: 66672 gggaatgcctgcctatgatcattttcctaaggaacagacttaagtatgctct 66723
>emb|AL627393.13| Mouse DNA sequence from clone RP23-154M2 on chromosome 4, complete sequence Length = 78456 Score = 48.1 bits (24), Expect = 0.031 Identities = 48/56 (85%) Strand = Plus / Minus Query: 203 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacaga 258 |||||||||||||| ||||||||||||||||| ||| | |||| ||||||||| Sbjct: 2094 ctggtcctcacaagctgagggaatgcctgcctctcatcattttcctaaggaacaga 2039
>ref|XM_521131.1| PREDICTED: Pan troglodytes similar to 40S ribosomal protein S4, X isoform (LOC465710), mRNA Length = 863 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 322 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 368 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 226 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 272 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 530 atgatggccgcaccatccgctaccc 554 |||||| |||||||||||||||||| Sbjct: 434 atgatgcccgcaccatccgctaccc 458
>gb|BC000472.2| Homo sapiens ribosomal protein S4, X-linked, mRNA (cDNA clone MGC:8636 IMAGE:2961540), complete cds Length = 889 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 322 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 368 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 225 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 271 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 530 atgatggccgcaccatccgctaccc 554 |||||| |||||||||||||||||| Sbjct: 433 atgatgcccgcaccatccgctaccc 457
>gb|BC007308.1| Homo sapiens ribosomal protein S4, X-linked, mRNA (cDNA clone IMAGE:3352599), partial cds Length = 822 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 322 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 368 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 157 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 203 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 530 atgatggccgcaccatccgctaccc 554 |||||| |||||||||||||||||| Sbjct: 365 atgatgcccgcaccatccgctaccc 389
>ref|XR_002591.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X isoform (LOC546380), mRNA Length = 917 Score = 46.1 bits (23), Expect = 0.12 Identities = 56/67 (83%) Strand = Plus / Plus Query: 203 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 262 |||||||||||||| |||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 125 ctggtcctcacaagctgagggaatgcctgcctcccatcattttcctaaggaacagactta 184 Query: 263 aatatgc 269 | ||||| Sbjct: 185 agtatgc 191
>ref|XR_002550.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X isoform (LOC225134), mRNA Length = 936 Score = 46.1 bits (23), Expect = 0.12 Identities = 56/67 (83%) Strand = Plus / Plus Query: 203 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 262 |||||||||||||| |||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 121 ctggtcctcacaagctgagggaatgcctgcctcccatcattttcctaaggaacagactta 180 Query: 263 aatatgc 269 | ||||| Sbjct: 181 agtatgc 187
>ref|XR_003977.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S4, X isoform (LOC672743), mRNA Length = 928 Score = 46.1 bits (23), Expect = 0.12 Identities = 56/67 (83%) Strand = Plus / Plus Query: 203 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 262 |||||||||||||| |||||||||| |||||| ||| | |||| ||||||||||| | Sbjct: 98 ctggtcctcacaagctgagggaatgcccgcctctcatcattttcctaaggaacagactta 157 Query: 263 aatatgc 269 | ||||| Sbjct: 158 agtatgc 164
>gb|BC000236.1| Homo sapiens translin-associated factor X, mRNA (cDNA clone IMAGE:3351964), **** WARNING: chimeric clone **** Length = 2323 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 322 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 368 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 1642 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 1688 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 530 atgatggccgcaccatccgctaccc 554 |||||| |||||||||||||||||| Sbjct: 1850 atgatgcccgcaccatccgctaccc 1874
>ref|NM_001007.3| Homo sapiens ribosomal protein S4, X-linked (RPS4X), mRNA Length = 977 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 322 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 368 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 313 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 359 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 530 atgatggccgcaccatccgctaccc 554 |||||| |||||||||||||||||| Sbjct: 521 atgatgcccgcaccatccgctaccc 545
>gb|BC100904.1| Homo sapiens ribosomal protein S4, X-linked, mRNA (cDNA clone MGC:119099 IMAGE:40003601), complete cds Length = 792 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 322 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 368 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 217 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 263 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 530 atgatggccgcaccatccgctaccc 554 |||||| |||||||||||||||||| Sbjct: 425 atgatgcccgcaccatccgctaccc 449
>gb|BC100903.1| Homo sapiens ribosomal protein S4, X-linked, mRNA (cDNA clone MGC:119098 IMAGE:40003600), complete cds Length = 792 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 322 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 368 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 217 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 263 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 530 atgatggccgcaccatccgctaccc 554 |||||| |||||||||||||||||| Sbjct: 425 atgatgcccgcaccatccgctaccc 449
>emb|CR601794.1| full-length cDNA clone CS0DI031YB06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 858 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 322 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 368 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 215 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 261 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 530 atgatggccgcaccatccgctaccc 554 |||||| |||||||||||||||||| Sbjct: 423 atgatgcccgcaccatccgctaccc 447
>emb|CR623958.1| full-length cDNA clone CS0DE004YB10 of Placenta of Homo sapiens (human) Length = 1896 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 322 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 368 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 215 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 261 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 530 atgatggccgcaccatccgctaccc 554 |||||| |||||||||||||||||| Sbjct: 1503 atgatgcccgcaccatccgctaccc 1527
>emb|CR620411.1| full-length cDNA clone CS0DE011YG15 of Placenta of Homo sapiens (human) Length = 1386 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 322 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 368 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 215 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 261 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 530 atgatggccgcaccatccgctaccc 554 |||||| |||||||||||||||||| Sbjct: 423 atgatgcccgcaccatccgctaccc 447
>dbj|AK097914.1| Homo sapiens cDNA FLJ40595 fis, clone THYMU2010705, highly similar to 40S RIBOSOMAL PROTEIN S4, X ISOFORM Length = 2747 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 322 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 368 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 2114 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 2160 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 530 atgatggccgcaccatccgctaccc 554 |||||| |||||||||||||||||| Sbjct: 2322 atgatgcccgcaccatccgctaccc 2346
>emb|CR597791.1| full-length cDNA clone CS0DI068YM24 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 848 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 322 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 368 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 215 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 261 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 530 atgatggccgcaccatccgctaccc 554 |||||| |||||||||||||||||| Sbjct: 423 atgatgcccgcaccatccgctaccc 447
>emb|CR595707.1| full-length cDNA clone CL0BB017ZH01 of Neuroblastoma of Homo sapiens (human) Length = 858 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 322 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 368 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 215 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 261 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 530 atgatggccgcaccatccgctaccc 554 |||||| |||||||||||||||||| Sbjct: 423 atgatgcccgcaccatccgctaccc 447
>emb|CR456735.1| Homo sapiens full open reading frame cDNA clone RZPDo834G036D for gene RPS4X, ribosomal protein S4, X-linked; complete cds, incl. stopcodon Length = 792 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 322 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 368 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 217 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 263 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 530 atgatggccgcaccatccgctaccc 554 |||||| |||||||||||||||||| Sbjct: 425 atgatgcccgcaccatccgctaccc 449
>dbj|AK222479.1| Homo sapiens mRNA for ribosomal protein S4, X-linked X isoform variant, clone: adKA01615 Length = 900 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 322 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 368 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 242 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 288 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 530 atgatggccgcaccatccgctaccc 554 |||||| |||||||||||||||||| Sbjct: 450 atgatgcccgcaccatccgctaccc 474
>emb|AL929051.24| Mouse DNA sequence from clone RP23-418P21 on chromosome 2, complete sequence Length = 148072 Score = 46.1 bits (23), Expect = 0.12 Identities = 56/67 (83%) Strand = Plus / Minus Query: 203 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 262 |||||||||||||| |||||||||| |||||| ||| | |||| ||||||||||| | Sbjct: 62374 ctggtcctcacaagctgagggaatgcccgcctctcatcattttcctaaggaacagactta 62315 Query: 263 aatatgc 269 | ||||| Sbjct: 62314 agtatgc 62308
>gb|BC071662.1| Homo sapiens ribosomal protein S4, X-linked, mRNA (cDNA clone MGC:87857 IMAGE:5505465), complete cds Length = 905 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 322 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 368 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 254 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 300 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 530 atgatggccgcaccatccgctaccc 554 |||||| |||||||||||||||||| Sbjct: 462 atgatgcccgcaccatccgctaccc 486
>gb|AC148013.3| Mus musculus BAC clone RP23-134C2 from 18, complete sequence Length = 192504 Score = 46.1 bits (23), Expect = 0.12 Identities = 56/67 (83%) Strand = Plus / Minus Query: 203 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 262 |||||||||||||| |||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 102468 ctggtcctcacaagctgagggaatgcctgcctcccatcattttcctaaggaacagactta 102409 Query: 263 aatatgc 269 | ||||| Sbjct: 102408 agtatgc 102402
>gb|M58458.1|HUMRPS4X Human ribosomal protein S4 (RPS4X) isoform mRNA, complete cds Length = 888 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 322 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 368 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 252 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 298 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 530 atgatggccgcaccatccgctaccc 554 |||||| |||||||||||||||||| Sbjct: 460 atgatgcccgcaccatccgctaccc 484
>gb|M22146.1|HUMSCAR Human scar protein mRNA, complete cds Length = 864 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 322 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 368 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 222 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 268 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 530 atgatggccgcaccatccgctaccc 554 |||||| |||||||||||||||||| Sbjct: 430 atgatgcccgcaccatccgctaccc 454
>dbj|AB024285.1| Macaca fuscata mRNA for ribosomal protein S4X (RPS4X), complete cds Length = 853 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 322 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 368 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 217 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 263 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 530 atgatggccgcaccatccgctaccc 554 |||||| |||||||||||||||||| Sbjct: 425 atgatgcccgcaccatccgctaccc 449
>dbj|D50104.1| Macaca fuscata mRNA for ribosomal protein S4, partial cds Length = 581 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 322 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 368 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 160 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 206 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 530 atgatggccgcaccatccgctaccc 554 |||||| |||||||||||||||||| Sbjct: 368 atgatgcccgcaccatccgctaccc 392
>dbj|AB015610.1| Chlorocebus aethiops mRNA for ribosomal protein S4X, complete cds Length = 878 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 322 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgga 368 ||||| |||||||| ||||| | |||||||||||||| |||||||| Sbjct: 240 gatggcaaggtccgaactgatataacctaccctgctggattcatgga 286 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 530 atgatggccgcaccatccgctaccc 554 |||||| |||||||||||||||||| Sbjct: 448 atgatgcccgcaccatccgctaccc 472
>emb|AL731648.6| Mouse DNA sequence from clone RP23-35I10 on chromosome X, complete sequence Length = 119995 Score = 46.1 bits (23), Expect = 0.12 Identities = 56/67 (83%) Strand = Plus / Minus Query: 203 ctggtcctcacaaggccagggaatgcctgcctctgatcctcatcctgaggaacagactga 262 |||||||||||||| |||||||||||||||| ||| | |||| ||||||||||| | Sbjct: 90006 ctggtcctcacaagctgagggaatgcctgcctcccatcattttcctaaggaacagactta 89947 Query: 263 aatatgc 269 | ||||| Sbjct: 89946 agtatgc 89940
>gb|AY190741.1| Pagrus major 40S ribosomal protein S4 mRNA, partial cds Length = 703 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 459 ccgcaccatccgctacccagac 480
>emb|CR712301.2|CNS0GCK9 Tetraodon nigroviridis full-length cDNA Length = 868 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 451 ccgcaccatccgctacccagac 472
>emb|CR720218.2|CNS0GIO0 Tetraodon nigroviridis full-length cDNA Length = 845 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 426 ccgcaccatccgctacccagac 447
>emb|CR720216.2|CNS0GINY Tetraodon nigroviridis full-length cDNA Length = 847 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 430 ccgcaccatccgctacccagac 451
>emb|CR722715.2|CNS0GKLD Tetraodon nigroviridis full-length cDNA Length = 848 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 431 ccgcaccatccgctacccagac 452
>emb|CR721883.2|CNS0GJY9 Tetraodon nigroviridis full-length cDNA Length = 869 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 452 ccgcaccatccgctacccagac 473
>emb|CR720853.2|CNS0GJ5N Tetraodon nigroviridis full-length cDNA Length = 756 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 338 ccgcaccatccgctacccagac 359
>emb|CR720472.2|CNS0GIV2 Tetraodon nigroviridis full-length cDNA Length = 842 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 430 ccgcaccatccgctacccagac 451
>emb|CR719441.2|CNS0GI2F Tetraodon nigroviridis full-length cDNA Length = 848 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 431 ccgcaccatccgctacccagac 452
>emb|CR719306.2|CNS0GHYO Tetraodon nigroviridis full-length cDNA Length = 847 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 430 ccgcaccatccgctacccagac 451
>emb|CR717405.2|CNS0GGHV Tetraodon nigroviridis full-length cDNA Length = 869 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 452 ccgcaccatccgctacccagac 473
>emb|CR717315.2|CNS0GGFD Tetraodon nigroviridis full-length cDNA Length = 587 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 430 ccgcaccatccgctacccagac 451
>emb|CR716926.2|CNS0GG4N Tetraodon nigroviridis full-length cDNA Length = 574 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 417 ccgcaccatccgctacccagac 438
>emb|CR711409.2|CNS0GBVH Tetraodon nigroviridis full-length cDNA Length = 610 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 453 ccgcaccatccgctacccagac 474
>emb|CR714124.2|CNS0GDYW Tetraodon nigroviridis full-length cDNA Length = 610 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 453 ccgcaccatccgctacccagac 474
>emb|CR714283.2|CNS0GE3B Tetraodon nigroviridis full-length cDNA Length = 610 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 453 ccgcaccatccgctacccagac 474
>emb|CR712945.2|CNS0GD25 Tetraodon nigroviridis full-length cDNA Length = 847 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 430 ccgcaccatccgctacccagac 451
>emb|CR713157.2|CNS0GD81 Tetraodon nigroviridis full-length cDNA Length = 847 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 430 ccgcaccatccgctacccagac 451
>emb|CR710675.2|CNS0GBB3 Tetraodon nigroviridis full-length cDNA Length = 870 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 453 ccgcaccatccgctacccagac 474
>emb|CR710088.2|CNS0GAUS Tetraodon nigroviridis full-length cDNA Length = 847 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 430 ccgcaccatccgctacccagac 451
>emb|CR708708.2|CNS0G9SG Tetraodon nigroviridis full-length cDNA Length = 610 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 453 ccgcaccatccgctacccagac 474
>emb|CR707417.2|CNS0G8SL Tetraodon nigroviridis full-length cDNA Length = 920 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 506 ccgcaccatccgctacccagac 527
>emb|CR706939.2|CNS0G8FB Tetraodon nigroviridis full-length cDNA Length = 847 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 430 ccgcaccatccgctacccagac 451
>emb|CR704562.2|CNS0G6LA Tetraodon nigroviridis full-length cDNA Length = 868 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 452 ccgcaccatccgctacccagac 473
>emb|CR704014.2|CNS0G662 Tetraodon nigroviridis full-length cDNA Length = 847 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 430 ccgcaccatccgctacccagac 451
>emb|CR703820.2|CNS0G60O Tetraodon nigroviridis full-length cDNA Length = 847 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 430 ccgcaccatccgctacccagac 451
>emb|CR703584.2|CNS0G5U4 Tetraodon nigroviridis full-length cDNA Length = 847 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 430 ccgcaccatccgctacccagac 451
>emb|CR703489.2|CNS0G5RH Tetraodon nigroviridis full-length cDNA Length = 870 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 453 ccgcaccatccgctacccagac 474
>emb|CR702840.2|CNS0G59G Tetraodon nigroviridis full-length cDNA Length = 870 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 453 ccgcaccatccgctacccagac 474
>emb|CR702635.2|CNS0G53R Tetraodon nigroviridis full-length cDNA Length = 871 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 454 ccgcaccatccgctacccagac 475
>emb|CR702209.2|CNS0G4RX Tetraodon nigroviridis full-length cDNA Length = 870 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 453 ccgcaccatccgctacccagac 474
>emb|CR702145.2|CNS0G4Q5 Tetraodon nigroviridis full-length cDNA Length = 868 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 451 ccgcaccatccgctacccagac 472
>emb|CR700232.2|CNS0G390 Tetraodon nigroviridis full-length cDNA Length = 842 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 430 ccgcaccatccgctacccagac 451
>emb|CR697958.2|CNS0G1HU Tetraodon nigroviridis full-length cDNA Length = 870 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 453 ccgcaccatccgctacccagac 474
>emb|CR697195.2|CNS0G0WN Tetraodon nigroviridis full-length cDNA Length = 871 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 454 ccgcaccatccgctacccagac 475
>emb|CR697018.2|CNS0G0RQ Tetraodon nigroviridis full-length cDNA Length = 828 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 429 ccgcaccatccgctacccagac 450
>emb|CR696565.2|CNS0G0F5 Tetraodon nigroviridis full-length cDNA Length = 846 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 430 ccgcaccatccgctacccagac 451
>emb|CR696312.2|CNS0G084 Tetraodon nigroviridis full-length cDNA Length = 847 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 430 ccgcaccatccgctacccagac 451
>emb|CR694977.2|CNS0FZ71 Tetraodon nigroviridis full-length cDNA Length = 871 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 453 ccgcaccatccgctacccagac 474
>emb|CR694101.2|CNS0FYIP Tetraodon nigroviridis full-length cDNA Length = 847 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 430 ccgcaccatccgctacccagac 451
>emb|CR693396.2|CNS0FXZ4 Tetraodon nigroviridis full-length cDNA Length = 869 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 452 ccgcaccatccgctacccagac 473
>emb|CR691738.2|CNS0FWP2 Tetraodon nigroviridis full-length cDNA Length = 870 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 453 ccgcaccatccgctacccagac 474
>emb|CR688407.2|CNS0FU4J Tetraodon nigroviridis full-length cDNA Length = 848 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 430 ccgcaccatccgctacccagac 451
>emb|CR689769.2|CNS0FV6D Tetraodon nigroviridis full-length cDNA Length = 871 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 454 ccgcaccatccgctacccagac 475
>emb|CR687727.2|CNS0FTLN Tetraodon nigroviridis full-length cDNA Length = 870 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 453 ccgcaccatccgctacccagac 474
>emb|CR686869.2|CNS0FSXT Tetraodon nigroviridis full-length cDNA Length = 868 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 451 ccgcaccatccgctacccagac 472
>emb|CR685258.2|CNS0FRP2 Tetraodon nigroviridis full-length cDNA Length = 847 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 454 ccgcaccatccgctacccagac 475
>emb|CR685076.2|CNS0FRK0 Tetraodon nigroviridis full-length cDNA Length = 847 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 430 ccgcaccatccgctacccagac 451
>emb|CR684709.2|CNS0FR9T Tetraodon nigroviridis full-length cDNA Length = 869 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 452 ccgcaccatccgctacccagac 473
>emb|CR684226.2|CNS0FQWE Tetraodon nigroviridis full-length cDNA Length = 872 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 454 ccgcaccatccgctacccagac 475
>emb|CR683325.2|CNS0FQ7D Tetraodon nigroviridis full-length cDNA Length = 868 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 452 ccgcaccatccgctacccagac 473
>emb|CR682942.2|CNS0FPWQ Tetraodon nigroviridis full-length cDNA Length = 763 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 346 ccgcaccatccgctacccagac 367
>emb|CR682258.2|CNS0FPDQ Tetraodon nigroviridis full-length cDNA Length = 869 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 452 ccgcaccatccgctacccagac 473
>emb|CR681455.2|CNS0FORF Tetraodon nigroviridis full-length cDNA Length = 610 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 453 ccgcaccatccgctacccagac 474
>emb|CR681050.2|CNS0FOG6 Tetraodon nigroviridis full-length cDNA Length = 847 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 430 ccgcaccatccgctacccagac 451
>emb|CR680145.2|CNS0FNR1 Tetraodon nigroviridis full-length cDNA Length = 871 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 454 ccgcaccatccgctacccagac 475
>emb|CR676429.2|CNS0FKW9 Tetraodon nigroviridis full-length cDNA Length = 609 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 452 ccgcaccatccgctacccagac 473
>emb|CR675710.2|CNS0FKCK Tetraodon nigroviridis full-length cDNA Length = 835 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 431 ccgcaccatccgctacccagac 452
>emb|CR673595.2|CNS0FIPT Tetraodon nigroviridis full-length cDNA Length = 847 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 430 ccgcaccatccgctacccagac 451
>emb|CR671087.2|CNS0FGS5 Tetraodon nigroviridis full-length cDNA Length = 871 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 454 ccgcaccatccgctacccagac 475
>emb|CR670866.2|CNS0FGM0 Tetraodon nigroviridis full-length cDNA Length = 847 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 430 ccgcaccatccgctacccagac 451
>emb|CR669893.2|CNS0FFUZ Tetraodon nigroviridis full-length cDNA Length = 871 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 454 ccgcaccatccgctacccagac 475
>emb|CR669083.2|CNS0FF8H Tetraodon nigroviridis full-length cDNA Length = 831 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 431 ccgcaccatccgctacccagac 452
>emb|CR663251.2|CNS0FAQH Tetraodon nigroviridis full-length cDNA Length = 871 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 454 ccgcaccatccgctacccagac 475
>emb|CR659804.2|CNS0F82Q Tetraodon nigroviridis full-length cDNA Length = 871 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 454 ccgcaccatccgctacccagac 475
>emb|CR659262.2|CNS0F7NO Tetraodon nigroviridis full-length cDNA Length = 872 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 454 ccgcaccatccgctacccagac 475
>emb|CR658566.2|CNS0F74C Tetraodon nigroviridis full-length cDNA Length = 870 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 453 ccgcaccatccgctacccagac 474
>emb|CR657212.2|CNS0F62Q Tetraodon nigroviridis full-length cDNA Length = 847 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 430 ccgcaccatccgctacccagac 451
>emb|CR656191.2|CNS0F5AD Tetraodon nigroviridis full-length cDNA Length = 869 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 452 ccgcaccatccgctacccagac 473
>emb|CR655155.2|CNS0F4HL Tetraodon nigroviridis full-length cDNA Length = 610 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 453 ccgcaccatccgctacccagac 474
>emb|CR654105.2|CNS0F3OF Tetraodon nigroviridis full-length cDNA Length = 610 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 453 ccgcaccatccgctacccagac 474
>emb|CR652992.2|CNS0F2TI Tetraodon nigroviridis full-length cDNA Length = 871 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 454 ccgcaccatccgctacccagac 475
>emb|CR651314.2|CNS0F1IW Tetraodon nigroviridis full-length cDNA Length = 609 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 452 ccgcaccatccgctacccagac 473
>emb|CR647718.2|CNS0EYR0 Tetraodon nigroviridis full-length cDNA Length = 847 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 430 ccgcaccatccgctacccagac 451
>emb|CR646899.2|CNS0EY49 Tetraodon nigroviridis full-length cDNA Length = 870 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 453 ccgcaccatccgctacccagac 474
>emb|CR645541.2|CNS0EX2J Tetraodon nigroviridis full-length cDNA Length = 862 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 452 ccgcaccatccgctacccagac 473
>emb|CR644913.2|CNS0EWL3 Tetraodon nigroviridis full-length cDNA Length = 609 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 452 ccgcaccatccgctacccagac 473
>emb|CR642563.2|CNS0EURT Tetraodon nigroviridis full-length cDNA Length = 870 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 453 ccgcaccatccgctacccagac 474
>emb|CR642362.2|CNS0EUM8 Tetraodon nigroviridis full-length cDNA Length = 870 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 453 ccgcaccatccgctacccagac 474
>emb|CR641651.2|CNS0EU2H Tetraodon nigroviridis full-length cDNA Length = 870 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 453 ccgcaccatccgctacccagac 474
>emb|CR641329.2|CNS0ETTJ Tetraodon nigroviridis full-length cDNA Length = 870 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 453 ccgcaccatccgctacccagac 474
>emb|CR641017.2|CNS0ETKV Tetraodon nigroviridis full-length cDNA Length = 870 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 453 ccgcaccatccgctacccagac 474
>emb|CR639635.2|CNS0ESIH Tetraodon nigroviridis full-length cDNA Length = 847 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 430 ccgcaccatccgctacccagac 451
>emb|CR638530.2|CNS0ERNS Tetraodon nigroviridis full-length cDNA Length = 870 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 453 ccgcaccatccgctacccagac 474
>emb|CR637949.2|CNS0ER7N Tetraodon nigroviridis full-length cDNA Length = 870 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 453 ccgcaccatccgctacccagac 474
>emb|CR636021.2|CNS0EPQ3 Tetraodon nigroviridis full-length cDNA Length = 869 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 452 ccgcaccatccgctacccagac 473
>emb|CR634987.2|CNS0EOXD Tetraodon nigroviridis full-length cDNA Length = 871 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 453 ccgcaccatccgctacccagac 474
>emb|CR634338.2|CNS0EOFC Tetraodon nigroviridis full-length cDNA Length = 871 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 537 ccgcaccatccgctacccagac 558 |||||||||||||||||||||| Sbjct: 454 ccgcaccatccgctacccagac 475
>emb|AL135749.3|HSN14 Homo sapiens chromosome X sequence from BAC CEPHB197N14 region PHKA1-DXS227 map Xq13, complete sequence Length = 156655 Score = 44.1 bits (22), Expect = 0.48 Identities = 40/46 (86%) Strand = Plus / Minus Query: 322 gatggaaaggtccgcactgacaagacctaccctgctggtttcatgg 367 ||||| |||||||| ||||| | |||||||||||||| ||||||| Sbjct: 89478 gatggcaaggtccgaactgatataacctaccctgctggattcatgg 89433 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 530 atgatggccgcaccatccgctaccc 554 |||||| |||||||||||||||||| Sbjct: 87797 atgatgcccgcaccatccgctaccc 87773 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,230,116 Number of Sequences: 3902068 Number of extensions: 5230116 Number of successful extensions: 95506 Number of sequences better than 10.0: 328 Number of HSP's better than 10.0 without gapping: 328 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 94260 Number of HSP's gapped (non-prelim): 1146 length of query: 558 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 535 effective length of database: 17,143,297,704 effective search space: 9171664271640 effective search space used: 9171664271640 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
