Clone Name | bart56h02 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | RCEL_RHOSH (P0C0Y8) Reaction center protein L chain (Photosynthe... | 30 | 6.7 | 2 | RCEL_RHOS4 (Q3J1A5) Reaction center protein L chain (Photosynthe... | 30 | 6.7 |
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>RCEL_RHOSH (P0C0Y8) Reaction center protein L chain (Photosynthetic reaction| center L subunit) Length = 281 Score = 29.6 bits (65), Expect = 6.7 Identities = 6/10 (60%), Positives = 9/10 (90%) Frame = -3 Query: 577 WWRWWKRMPW 548 WW+WW ++PW Sbjct: 262 WWQWWVKLPW 271
>RCEL_RHOS4 (Q3J1A5) Reaction center protein L chain (Photosynthetic reaction| center L subunit) Length = 281 Score = 29.6 bits (65), Expect = 6.7 Identities = 6/10 (60%), Positives = 9/10 (90%) Frame = -3 Query: 577 WWRWWKRMPW 548 WW+WW ++PW Sbjct: 262 WWQWWVKLPW 271 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,837,623 Number of Sequences: 219361 Number of extensions: 783454 Number of successful extensions: 2780 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2609 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2778 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5101629520 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)