Clone Name | bart56g09 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | PGIP1_ORYSA (Q8GT95) Polygalacturonase inhibitor 1 precursor (Po... | 43 | 2e-04 | 2 | PGIP3_PHAVU (P58823) Polygalacturonase inhibitor 3 precursor (Po... | 32 | 0.56 | 3 | PGIP2_PHAVU (P58822) Polygalacturonase inhibitor 2 precursor (Po... | 32 | 0.56 | 4 | PGIP1_PHAVU (P35334) Polygalacturonase inhibitor 1 precursor (Po... | 32 | 0.56 |
---|
>PGIP1_ORYSA (Q8GT95) Polygalacturonase inhibitor 1 precursor| (Polygalacturonase-inhibiting protein) (Floral organ regulator 1) Length = 332 Score = 43.1 bits (100), Expect = 2e-04 Identities = 18/23 (78%), Positives = 22/23 (95%) Frame = +1 Query: 187 RCPQADRQALLRVKQALGNPATL 255 RCP +D+QAL+RVKQ+LGNPATL Sbjct: 26 RCPPSDKQALMRVKQSLGNPATL 48
>PGIP3_PHAVU (P58823) Polygalacturonase inhibitor 3 precursor| (Polygalacturonase-inhibiting protein) (PGIP-2) (PGIP-3) Length = 342 Score = 31.6 bits (70), Expect = 0.56 Identities = 13/22 (59%), Positives = 17/22 (77%) Frame = +1 Query: 190 CPQADRQALLRVKQALGNPATL 255 C D+QALL++K+ LGNP TL Sbjct: 32 CNPQDKQALLQIKKDLGNPTTL 53
>PGIP2_PHAVU (P58822) Polygalacturonase inhibitor 2 precursor| (Polygalacturonase-inhibiting protein) (PGIP-2) Length = 342 Score = 31.6 bits (70), Expect = 0.56 Identities = 13/22 (59%), Positives = 17/22 (77%) Frame = +1 Query: 190 CPQADRQALLRVKQALGNPATL 255 C D+QALL++K+ LGNP TL Sbjct: 32 CNPQDKQALLQIKKDLGNPTTL 53
>PGIP1_PHAVU (P35334) Polygalacturonase inhibitor 1 precursor| (Polygalacturonase-inhibiting protein) (PGIP-1) Length = 342 Score = 31.6 bits (70), Expect = 0.56 Identities = 13/22 (59%), Positives = 17/22 (77%) Frame = +1 Query: 190 CPQADRQALLRVKQALGNPATL 255 C D+QALL++K+ LGNP TL Sbjct: 32 CNPQDKQALLQIKKDLGNPTTL 53 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.308 0.119 0.314 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 17,262,192 Number of Sequences: 219361 Number of extensions: 130735 Number of successful extensions: 255 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 250 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 255 length of database: 80,573,946 effective HSP length: 60 effective length of database: 67,412,286 effective search space used: 1617894864 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits)