>GLGB_NOCFA (Q5Z0W8) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen|
           branching enzyme) (BE)
           (1,4-alpha-D-glucan:1,4-alpha-D-glucan
           6-glucosyl-transferase)
          Length = 744

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
 Frame = +3

Query: 342 GSLPMSIPDWQKILGGEYRDHY--AGEWE--LDGDDDDYSKLGAGCRSGSVVPPHELAWR 509
           GS    + ++   L GEYR     AGEW   L+ D  DY   G+G  +  VV   E+ W 
Sbjct: 664 GSTVACVFNFSGALHGEYRVGLPIAGEWTEILNTDAADYG--GSGVGNYGVVRTEEIPWH 721

Query: 510 SRAASLSV 533
            R  S +V
Sbjct: 722 GRPVSATV 729

>NODO_RHILV (P15728) Nodulation protein O|
          Length = 284

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 24/82 (29%), Positives = 35/82 (42%)
 Frame = +3

Query: 330 GAVPGSLPMSIPDWQKILGGEYRDHYAGEWELDGDDDDYSKLGAGCRSGSVVPPHELAWR 509
           G+  GS     P+   I GG+  D     W   G+ DD  K G G  S +  P H++ W 
Sbjct: 5   GSDNGSFIKGSPENDIIDGGKKND-----WIDAGNGDDRIKAGDGQDSITAGPGHDIVWA 59

Query: 510 SRAASLSVHEGVGRTLKGRDLS 575
            + + + +H   G  L   D S
Sbjct: 60  GKGSDV-IHADGGDDLLYSDAS 80

>TYSY_STRT2 (Q5M5B3) Thymidylate synthase (EC 2.1.1.45) (TS) (TSase)|
          Length = 286

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +3

Query: 378 ILGGEYRDHYAGEWELDG-DDDDYSKLGAGCRSGSVVPPHEL 500
           +L  +Y  HY  +WE++G   ++  K   G R G+VV  H++
Sbjct: 84  VLEDKYNVHYWNDWEVEGVPANNGDKRSIGQRYGAVVKKHDI 125

>TYSY_STRT1 (Q5M0S7) Thymidylate synthase (EC 2.1.1.45) (TS) (TSase)|
          Length = 286

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +3

Query: 378 ILGGEYRDHYAGEWELDG-DDDDYSKLGAGCRSGSVVPPHEL 500
           +L  +Y  HY  +WE++G   ++  K   G R G+VV  H++
Sbjct: 84  VLEDKYNVHYWNDWEVEGVPANNGDKRSIGQRYGAVVKKHDI 125


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,155,099
Number of Sequences: 219361
Number of extensions: 1031350
Number of successful extensions: 3411
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3407
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5101629520
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)