ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart56g03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_473215.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 525 Score = 153 bits (77), Expect = 8e-34 Identities = 98/105 (93%) Strand = Plus / Plus Query: 484 taccgccgcacgagctggcgtggcgcagccgcgccgcgtccctgtcggtgcacgaggggg 543 |||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||| Sbjct: 389 taccgccgcacgagctggcgtggcgcggccgcgcggcgtcgctgtcggtgcacgagggga 448 Query: 544 tggggaggacgctcaaggggcgcgacctcagccgcgtccgcgacg 588 | |||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 449 tcgggaggacgctcaaggggcgcgacctcagccgggtccgggacg 493 Score = 107 bits (54), Expect = 4e-20 Identities = 121/142 (85%), Gaps = 6/142 (4%) Strand = Plus / Plus Query: 105 atggccgggagtgcgaggtcggcggccgcgaagcacgcgtaccggatgttcacgccgtcc 164 ||||| ||||| |||||||||||||| ||||||||||| |||||||||||| |||||||| Sbjct: 1 atggctgggagcgcgaggtcggcggcagcgaagcacgcctaccggatgttcgcgccgtcc 60 Query: 165 cggagcgcggcggcgctgggcagccccggcag---cgcggcggacgagttcgacgagtca 221 || |||| ||||| | | ||||||| || || ||||||||||||||||||||| Sbjct: 61 aggggcgcagcggc---gaggtgccccggaagccccggggcggacgagttcgacgagtcg 117 Query: 222 gacgtgtggggctcgttcggcg 243 |||||||||||||||| ||||| Sbjct: 118 gacgtgtggggctcgtacggcg 139 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 340 ccgggtcgctgccgatgagcataccggactggcagaagatcctcggaggcgagtacaggg 399 |||| ||||||||| ||| ||||||||||||||||||||| || || | ||||||||||| Sbjct: 236 ccggctcgctgccggtgaacataccggactggcagaagattcttggggtcgagtacaggg 295 Query: 400 a 400 | Sbjct: 296 a 296
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 153 bits (77), Expect = 8e-34 Identities = 98/105 (93%) Strand = Plus / Minus Query: 484 taccgccgcacgagctggcgtggcgcagccgcgccgcgtccctgtcggtgcacgaggggg 543 |||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||| Sbjct: 26048694 taccgccgcacgagctggcgtggcgcggccgcgcggcgtcgctgtcggtgcacgagggga 26048635 Query: 544 tggggaggacgctcaaggggcgcgacctcagccgcgtccgcgacg 588 | |||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 26048634 tcgggaggacgctcaaggggcgcgacctcagccgggtccgggacg 26048590 Score = 107 bits (54), Expect = 4e-20 Identities = 121/142 (85%), Gaps = 6/142 (4%) Strand = Plus / Minus Query: 105 atggccgggagtgcgaggtcggcggccgcgaagcacgcgtaccggatgttcacgccgtcc 164 ||||| ||||| |||||||||||||| ||||||||||| |||||||||||| |||||||| Sbjct: 26049082 atggctgggagcgcgaggtcggcggcagcgaagcacgcctaccggatgttcgcgccgtcc 26049023 Query: 165 cggagcgcggcggcgctgggcagccccggcag---cgcggcggacgagttcgacgagtca 221 || |||| ||||| | | ||||||| || || ||||||||||||||||||||| Sbjct: 26049022 aggggcgcagcggc---gaggtgccccggaagccccggggcggacgagttcgacgagtcg 26048966 Query: 222 gacgtgtggggctcgttcggcg 243 |||||||||||||||| ||||| Sbjct: 26048965 gacgtgtggggctcgtacggcg 26048944 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 340 ccgggtcgctgccgatgagcataccggactggcagaagatcctcggaggcgagtacaggg 399 |||| ||||||||| ||| ||||||||||||||||||||| || || | ||||||||||| Sbjct: 26048847 ccggctcgctgccggtgaacataccggactggcagaagattcttggggtcgagtacaggg 26048788 Query: 400 a 400 | Sbjct: 26048787 a 26048787 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 420 gagctcgacggcgacgacgacgac 443 |||||||||| ||||||||||||| Sbjct: 16817781 gagctcgacgacgacgacgacgac 16817804
>dbj|AK065832.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036A08, full insert sequence Length = 1160 Score = 153 bits (77), Expect = 8e-34 Identities = 98/105 (93%) Strand = Plus / Plus Query: 484 taccgccgcacgagctggcgtggcgcagccgcgccgcgtccctgtcggtgcacgaggggg 543 |||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||| Sbjct: 613 taccgccgcacgagctggcgtggcgcggccgcgcggcgtcgctgtcggtgcacgagggga 672 Query: 544 tggggaggacgctcaaggggcgcgacctcagccgcgtccgcgacg 588 | |||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 673 tcgggaggacgctcaaggggcgcgacctcagccgggtccgggacg 717 Score = 107 bits (54), Expect = 4e-20 Identities = 121/142 (85%), Gaps = 6/142 (4%) Strand = Plus / Plus Query: 105 atggccgggagtgcgaggtcggcggccgcgaagcacgcgtaccggatgttcacgccgtcc 164 ||||| ||||| |||||||||||||| ||||||||||| |||||||||||| |||||||| Sbjct: 225 atggctgggagcgcgaggtcggcggcagcgaagcacgcctaccggatgttcgcgccgtcc 284 Query: 165 cggagcgcggcggcgctgggcagccccggcag---cgcggcggacgagttcgacgagtca 221 || |||| ||||| | | ||||||| || || ||||||||||||||||||||| Sbjct: 285 aggggcgcagcggc---gaggtgccccggaagccccggggcggacgagttcgacgagtcg 341 Query: 222 gacgtgtggggctcgttcggcg 243 |||||||||||||||| ||||| Sbjct: 342 gacgtgtggggctcgtacggcg 363 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 340 ccgggtcgctgccgatgagcataccggactggcagaagatcctcggaggcgagtacaggg 399 |||| ||||||||| ||| ||||||||||||||||||||| || || | ||||||||||| Sbjct: 460 ccggctcgctgccggtgaacataccggactggcagaagattcttggggtcgagtacaggg 519 Query: 400 a 400 | Sbjct: 520 a 520
>emb|AL662958.3|OSJN00156 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019D11, complete sequence Length = 163039 Score = 153 bits (77), Expect = 8e-34 Identities = 98/105 (93%) Strand = Plus / Minus Query: 484 taccgccgcacgagctggcgtggcgcagccgcgccgcgtccctgtcggtgcacgaggggg 543 |||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||| Sbjct: 83021 taccgccgcacgagctggcgtggcgcggccgcgcggcgtcgctgtcggtgcacgagggga 82962 Query: 544 tggggaggacgctcaaggggcgcgacctcagccgcgtccgcgacg 588 | |||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 82961 tcgggaggacgctcaaggggcgcgacctcagccgggtccgggacg 82917 Score = 107 bits (54), Expect = 4e-20 Identities = 121/142 (85%), Gaps = 6/142 (4%) Strand = Plus / Minus Query: 105 atggccgggagtgcgaggtcggcggccgcgaagcacgcgtaccggatgttcacgccgtcc 164 ||||| ||||| |||||||||||||| ||||||||||| |||||||||||| |||||||| Sbjct: 83409 atggctgggagcgcgaggtcggcggcagcgaagcacgcctaccggatgttcgcgccgtcc 83350 Query: 165 cggagcgcggcggcgctgggcagccccggcag---cgcggcggacgagttcgacgagtca 221 || |||| ||||| | | ||||||| || || ||||||||||||||||||||| Sbjct: 83349 aggggcgcagcggc---gaggtgccccggaagccccggggcggacgagttcgacgagtcg 83293 Query: 222 gacgtgtggggctcgttcggcg 243 |||||||||||||||| ||||| Sbjct: 83292 gacgtgtggggctcgtacggcg 83271 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 340 ccgggtcgctgccgatgagcataccggactggcagaagatcctcggaggcgagtacaggg 399 |||| ||||||||| ||| ||||||||||||||||||||| || || | ||||||||||| Sbjct: 83174 ccggctcgctgccggtgaacataccggactggcagaagattcttggggtcgagtacaggg 83115 Query: 400 a 400 | Sbjct: 83114 a 83114
>ref|XM_466865.1| Oryza sativa (japonica cultivar-group), mRNA Length = 968 Score = 93.7 bits (47), Expect = 6e-16 Identities = 53/55 (96%) Strand = Plus / Plus Query: 486 ccgccgcacgagctggcgtggcgcagccgcgccgcgtccctgtcggtgcacgagg 540 |||||||||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct: 528 ccgccgcacgagctggcgtggcgccgccgcgccgcgtcgctgtcggtgcacgagg 582 Score = 60.0 bits (30), Expect = 9e-06 Identities = 69/82 (84%) Strand = Plus / Plus Query: 341 cgggtcgctgccgatgagcataccggactggcagaagatcctcggaggcgagtacaggga 400 ||||||||||||| ||| ||||||||||||| |||||||| || | ||||||||||| Sbjct: 392 cgggtcgctgccggtgaacataccggactggtccaagatcctgggcgacgagtacagggg 451 Query: 401 ccactacgcaggcgagtgggag 422 ||| |||| ||||| |||||| Sbjct: 452 gcaccacgccggcgactgggag 473 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 204 gacgagttcgacgagtcagacgtgtggggctcgttcg 240 ||||||||||||||||| ||| | ||||| ||||||| Sbjct: 246 gacgagttcgacgagtcggacatctggggatcgttcg 282
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 93.7 bits (47), Expect = 6e-16 Identities = 53/55 (96%) Strand = Plus / Minus Query: 486 ccgccgcacgagctggcgtggcgcagccgcgccgcgtccctgtcggtgcacgagg 540 |||||||||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct: 25172231 ccgccgcacgagctggcgtggcgccgccgcgccgcgtcgctgtcggtgcacgagg 25172177 Score = 60.0 bits (30), Expect = 9e-06 Identities = 69/82 (84%) Strand = Plus / Minus Query: 341 cgggtcgctgccgatgagcataccggactggcagaagatcctcggaggcgagtacaggga 400 ||||||||||||| ||| ||||||||||||| |||||||| || | ||||||||||| Sbjct: 25172367 cgggtcgctgccggtgaacataccggactggtccaagatcctgggcgacgagtacagggg 25172308 Query: 401 ccactacgcaggcgagtgggag 422 ||| |||| ||||| |||||| Sbjct: 25172307 gcaccacgccggcgactgggag 25172286 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 204 gacgagttcgacgagtcagacgtgtggggctcgttcg 240 ||||||||||||||||| ||| | ||||| ||||||| Sbjct: 25172513 gacgagttcgacgagtcggacatctggggatcgttcg 25172477 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 tcgacggcgacgacgacgac 443 |||||||||||||||||||| Sbjct: 14207421 tcgacggcgacgacgacgac 14207440
>dbj|AP006168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1469H02 Length = 136602 Score = 93.7 bits (47), Expect = 6e-16 Identities = 53/55 (96%) Strand = Plus / Minus Query: 486 ccgccgcacgagctggcgtggcgcagccgcgccgcgtccctgtcggtgcacgagg 540 |||||||||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct: 72624 ccgccgcacgagctggcgtggcgccgccgcgccgcgtcgctgtcggtgcacgagg 72570 Score = 60.0 bits (30), Expect = 9e-06 Identities = 69/82 (84%) Strand = Plus / Minus Query: 341 cgggtcgctgccgatgagcataccggactggcagaagatcctcggaggcgagtacaggga 400 ||||||||||||| ||| ||||||||||||| |||||||| || | ||||||||||| Sbjct: 72760 cgggtcgctgccggtgaacataccggactggtccaagatcctgggcgacgagtacagggg 72701 Query: 401 ccactacgcaggcgagtgggag 422 ||| |||| ||||| |||||| Sbjct: 72700 gcaccacgccggcgactgggag 72679 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 204 gacgagttcgacgagtcagacgtgtggggctcgttcg 240 ||||||||||||||||| ||| | ||||| ||||||| Sbjct: 72906 gacgagttcgacgagtcggacatctggggatcgttcg 72870
>dbj|AK062480.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-G03, full insert sequence Length = 968 Score = 93.7 bits (47), Expect = 6e-16 Identities = 53/55 (96%) Strand = Plus / Plus Query: 486 ccgccgcacgagctggcgtggcgcagccgcgccgcgtccctgtcggtgcacgagg 540 |||||||||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct: 528 ccgccgcacgagctggcgtggcgccgccgcgccgcgtcgctgtcggtgcacgagg 582 Score = 60.0 bits (30), Expect = 9e-06 Identities = 69/82 (84%) Strand = Plus / Plus Query: 341 cgggtcgctgccgatgagcataccggactggcagaagatcctcggaggcgagtacaggga 400 ||||||||||||| ||| ||||||||||||| |||||||| || | ||||||||||| Sbjct: 392 cgggtcgctgccggtgaacataccggactggtccaagatcctgggcgacgagtacagggg 451 Query: 401 ccactacgcaggcgagtgggag 422 ||| |||| ||||| |||||| Sbjct: 452 gcaccacgccggcgactgggag 473 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 204 gacgagttcgacgagtcagacgtgtggggctcgttcg 240 ||||||||||||||||| ||| | ||||| ||||||| Sbjct: 246 gacgagttcgacgagtcggacatctggggatcgttcg 282
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 69.9 bits (35), Expect = 9e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 546 gggaggacgctcaaggggcgcgacctcagccgcgtccgc 584 ||||||||||||||||||||||||||| ||||||||||| Sbjct: 760048 gggaggacgctcaaggggcgcgacctccgccgcgtccgc 760086
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 69.9 bits (35), Expect = 9e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 546 gggaggacgctcaaggggcgcgacctcagccgcgtccgc 584 ||||||||||||||||||||||||||| ||||||||||| Sbjct: 760046 gggaggacgctcaaggggcgcgacctccgccgcgtccgc 760084
>gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0090O10, complete sequence Length = 162132 Score = 69.9 bits (35), Expect = 9e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 546 gggaggacgctcaaggggcgcgacctcagccgcgtccgc 584 ||||||||||||||||||||||||||| ||||||||||| Sbjct: 55593 gggaggacgctcaaggggcgcgacctccgccgcgtccgc 55631
>gb|AC121490.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0005F16, complete sequence Length = 160053 Score = 69.9 bits (35), Expect = 9e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 546 gggaggacgctcaaggggcgcgacctcagccgcgtccgc 584 ||||||||||||||||||||||||||| ||||||||||| Sbjct: 145929 gggaggacgctcaaggggcgcgacctccgccgcgtccgc 145967
>dbj|AK119700.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-D07, full insert sequence Length = 777 Score = 69.9 bits (35), Expect = 9e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 546 gggaggacgctcaaggggcgcgacctcagccgcgtccgc 584 ||||||||||||||||||||||||||| ||||||||||| Sbjct: 626 gggaggacgctcaaggggcgcgacctccgccgcgtccgc 664
>dbj|AK107900.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-F07, full insert sequence Length = 804 Score = 69.9 bits (35), Expect = 9e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 546 gggaggacgctcaaggggcgcgacctcagccgcgtccgc 584 ||||||||||||||||||||||||||| ||||||||||| Sbjct: 626 gggaggacgctcaaggggcgcgacctccgccgcgtccgc 664
>ref|NM_196479.1| Oryza sativa (japonica cultivar-group) putative prolyl 4-hydroxylase alpha subunit-like protein (OSJNBa0045B21.12), mRNA Length = 759 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 550 ggacgctcaaggggcgcgacctcagccgcgtccgcgacg 588 ||||||||||||||||||||||| ||||||| ||||||| Sbjct: 689 ggacgctcaaggggcgcgacctccgccgcgtgcgcgacg 727
>gb|AC112209.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0030I09 map C83B, complete sequence Length = 123477 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 546 gggaggacgctcaaggggcgcgacctcagccgcgtccgc 584 ||||||||||||||||||||||||||| |||||||||| Sbjct: 99265 gggaggacgctcaaggggcgcgacctccaccgcgtccgc 99227
>gb|AC027660.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone BAC nbxb0045B21, complete sequence Length = 152397 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 550 ggacgctcaaggggcgcgacctcagccgcgtccgcgacg 588 ||||||||||||||||||||||| ||||||| ||||||| Sbjct: 87839 ggacgctcaaggggcgcgacctccgccgcgtgcgcgacg 87801
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 546 gggaggacgctcaaggggcgcgacctcagccgcgtccgc 584 ||||||||||||||||| ||||||||| ||||||||||| Sbjct: 2751405 gggaggacgctcaagggccgcgacctccgccgcgtccgc 2751443 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgactac 446 |||||||||||||||||||||| Sbjct: 26916037 cgacggcgacgacgacgactac 26916058 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 420 gagctcgacggcgacgacgacgac 443 |||||||||| ||||||||||||| Sbjct: 3317762 gagctcgacgacgacgacgacgac 3317739
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 546 gggaggacgctcaaggggcgcgacctcagccgcgtccgc 584 ||||||||||||||||||||||||||| |||||||||| Sbjct: 2523139 gggaggacgctcaaggggcgcgacctccaccgcgtccgc 2523177
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 550 ggacgctcaaggggcgcgacctcagccgcgtccgcgacg 588 ||||||||||||||||||||||| ||||||| ||||||| Sbjct: 13919213 ggacgctcaaggggcgcgacctccgccgcgtgcgcgacg 13919175 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 552 acgctcaaggggcgcgacctcagccgcgtccgc 584 ||||||||||| ||||||||| ||||||||||| Sbjct: 17614653 acgctcaagggccgcgacctccgccgcgtccgc 17614621 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 12250477 cgacggcgacgacgacgact 12250496
>dbj|AK072969.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023144D16, full insert sequence Length = 964 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 546 gggaggacgctcaaggggcgcgacctcagccgcgtccgc 584 ||||||||||||||||||||||||||| |||||||||| Sbjct: 552 gggaggacgctcaaggggcgcgacctccaccgcgtccgc 590
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 550 ggacgctcaaggggcgcgacctcagccgcgtccgcgacg 588 ||||||||||||||||||||||| ||||||| ||||||| Sbjct: 13926555 ggacgctcaaggggcgcgacctccgccgcgtgcgcgacg 13926517 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 552 acgctcaaggggcgcgacctcagccgcgtccgc 584 ||||||||||| ||||||||| ||||||||||| Sbjct: 17623693 acgctcaagggccgcgacctccgccgcgtccgc 17623661 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 12257817 cgacggcgacgacgacgact 12257836
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 546 gggaggacgctcaaggggcgcgacctcagccgcgtccgc 584 ||||||||||||||||||||||||||| |||||||||| Sbjct: 2532170 gggaggacgctcaaggggcgcgacctccaccgcgtccgc 2532208
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 546 gggaggacgctcaaggggcgcgacctcagccgcgtccgc 584 ||||||||||||||||| ||||||||| ||||||||||| Sbjct: 2751349 gggaggacgctcaagggccgcgacctccgccgcgtccgc 2751387 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgactac 446 |||||||||||||||||||||| Sbjct: 26844207 cgacggcgacgacgacgactac 26844228 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 420 gagctcgacggcgacgacgacgac 443 |||||||||| ||||||||||||| Sbjct: 3317707 gagctcgacgacgacgacgacgac 3317684
>emb|AL928758.3|CNS08CBV Oryza sativa chromosome 12, . BAC OSJNBb0075N21 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145539 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 546 gggaggacgctcaaggggcgcgacctcagccgcgtccgc 584 ||||||||||||||||| ||||||||| ||||||||||| Sbjct: 119042 gggaggacgctcaagggccgcgacctccgccgcgtccgc 119004
>emb|AL954632.3|CNS08CD0 Oryza sativa chromosome 12, . BAC OSJNBa0031E02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151878 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 546 gggaggacgctcaaggggcgcgacctcagccgcgtccgc 584 ||||||||||||||||| ||||||||| ||||||||||| Sbjct: 120330 gggaggacgctcaagggccgcgacctccgccgcgtccgc 120368
>ref|NM_197033.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0093B11.10), mRNA Length = 534 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 552 acgctcaaggggcgcgacctcagccgcgtccgc 584 ||||||||||| ||||||||| ||||||||||| Sbjct: 466 acgctcaagggccgcgacctccgccgcgtccgc 498
>gb|AC024594.9| Oryza sativa chromosome 10 BAC OSJNBa0093B11 genomic sequence, complete sequence Length = 178692 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 552 acgctcaaggggcgcgacctcagccgcgtccgc 584 ||||||||||| ||||||||| ||||||||||| Sbjct: 59978 acgctcaagggccgcgacctccgccgcgtccgc 60010
>gb|AY112488.1| Zea mays CL43678_1 mRNA sequence Length = 595 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 545 ggggaggacgctcaaggggcgcgacctc 572 ||||||||||||||| |||||||||||| Sbjct: 320 ggggaggacgctcaaagggcgcgacctc 293
>ref|NM_191857.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 447 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Plus Query: 545 ggggaggacgctcaaggggcgcgacctcagccgcgtccgcgac 587 |||| ||||||||||||| || |||||| ||||||| |||||| Sbjct: 369 ggggcggacgctcaagggccgggacctccgccgcgtgcgcgac 411
>gb|AC130605.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0010D04, complete sequence Length = 122599 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 418 gggagctcgacggcgacgacgacgactacag 448 ||||||||| |||||||||||||||| |||| Sbjct: 34820 gggagctcggcggcgacgacgacgacgacag 34850
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 420 gagctcgacggcgacgacgacga 442 ||||||||||||||||||||||| Sbjct: 2240479 gagctcgacggcgacgacgacga 2240457 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 tcgacggcgacgacgacgac 443 |||||||||||||||||||| Sbjct: 7023352 tcgacggcgacgacgacgac 7023333
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 418 gggagctcgacggcgacgacgacgactacag 448 ||||||||| |||||||||||||||| |||| Sbjct: 24349030 gggagctcggcggcgacgacgacgacgacag 24349060 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 422 gctcgacggcgacgacgacgac 443 |||||||||||||||||||||| Sbjct: 25527436 gctcgacggcgacgacgacgac 25527457 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 425 cgacggcgacgacgacgactacagc 449 ||||||||||||||||||| ||||| Sbjct: 28989501 cgacggcgacgacgacgacgacagc 28989477 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgactacagcaag 452 ||||||||||||||||||| || ||||| Sbjct: 29127932 cgacggcgacgacgacgacgactgcaag 29127959 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 545 ggggaggacgctcaaggggcgcgacctc 572 ||||||||||||||| ||||| |||||| Sbjct: 26161879 ggggaggacgctcaaagggcgggacctc 26161906 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 422 gctcgacggcgacgacgacgactacagc 449 |||||||| ||||||||||||| ||||| Sbjct: 22270258 gctcgacgacgacgacgacgacgacagc 22270285 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 ggagctcgacggcgacgacg 438 |||||||||||||||||||| Sbjct: 12035554 ggagctcgacggcgacgacg 12035573 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 2814162 cgacggcgacgacgacgact 2814181 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 418 gggagctcgacggcgacgacgacg 441 ||||||||||||||| |||||||| Sbjct: 2375098 gggagctcgacggcgccgacgacg 2375075
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Minus Query: 545 ggggaggacgctcaaggggcgcgacctcagccgcgtccgcgac 587 |||| ||||||||||||| || |||||| ||||||| |||||| Sbjct: 30334601 ggggcggacgctcaagggccgggacctccgccgcgtgcgcgac 30334559 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 ccgcgccggcggccggaaga 312 |||||||||||||||||||| Sbjct: 21059764 ccgcgccggcggccggaaga 21059783
>dbj|AP003343.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0042A10 Length = 146840 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Minus Query: 545 ggggaggacgctcaaggggcgcgacctcagccgcgtccgcgac 587 |||| ||||||||||||| || |||||| ||||||| |||||| Sbjct: 122920 ggggcggacgctcaagggccgggacctccgccgcgtgcgcgac 122878
>dbj|AP002899.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456A01 Length = 143710 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Minus Query: 545 ggggaggacgctcaaggggcgcgacctcagccgcgtccgcgac 587 |||| ||||||||||||| || |||||| ||||||| |||||| Sbjct: 20328 ggggcggacgctcaagggccgggacctccgccgcgtgcgcgac 20286
>dbj|AP005585.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0448B11 Length = 179858 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 420 gagctcgacggcgacgacgacga 442 ||||||||||||||||||||||| Sbjct: 102317 gagctcgacggcgacgacgacga 102295
>gb|AC132491.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0599F04, complete sequence Length = 169073 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 422 gctcgacggcgacgacgacgac 443 |||||||||||||||||||||| Sbjct: 43843 gctcgacggcgacgacgacgac 43864
>gb|AC027133.3| Oryza sativa (japonica cultivar-group) chromosome 12 clone OSJNBb0003F09, complete sequence Length = 159600 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgactac 446 |||||||||||||||||||||| Sbjct: 41004 cgacggcgacgacgacgactac 41025
>gb|AF218053.1|AF218053 Desulfovibrio gigas rubredoxin-oxygen oxidoreductase (roo) gene, complete cds Length = 1209 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 317 gctggaccatgccggcgccgtgcccg 342 ||||||||||||||||||| |||||| Sbjct: 243 gctggaccatgccggcgccctgcccg 268
>dbj|AK174458.1| Ciona intestinalis cDNA, clone:cieg010k02, full insert sequence Length = 658 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 16 atttccctcctcacaactcgca 37 |||||||||||||||||||||| Sbjct: 25 atttccctcctcacaactcgca 4
>emb|AL831803.4|CNS08CAG Oryza sativa chromosome 12, . BAC OSJNBb0016P08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 142370 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgactac 446 |||||||||||||||||||||| Sbjct: 120004 cgacggcgacgacgacgactac 120025
>gb|AC137608.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009C07, complete sequence Length = 148731 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 425 cgacggcgacgacgacgactacagc 449 ||||||||||||||||||| ||||| Sbjct: 143794 cgacggcgacgacgacgacgacagc 143770
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 502 cgtggcgcagccgcgccgcgt 522 ||||||||||||||||||||| Sbjct: 1345093 cgtggcgcagccgcgccgcgt 1345073
>ref|XM_757230.1| Ustilago maydis 521 hypothetical protein (UM06176.1) partial mRNA Length = 3240 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 419 ggagctcgacggcgacgacgacgac 443 ||||||||||| ||||||||||||| Sbjct: 2565 ggagctcgacgacgacgacgacgac 2589
>gb|AC127351.3| Mus musculus BAC clone RP23-66K20 from chromosome 5, complete sequence Length = 238781 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 ctcctccctccgccaaagacc 58 ||||||||||||||||||||| Sbjct: 35302 ctcctccctccgccaaagacc 35282
>gb|AC122365.4| Mus musculus BAC clone RP23-447A7 from chromosome 5, complete sequence Length = 195492 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 ctcctccctccgccaaagacc 58 ||||||||||||||||||||| Sbjct: 130524 ctcctccctccgccaaagacc 130504
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 502 cgtggcgcagccgcgccgcgt 522 ||||||||||||||||||||| Sbjct: 2662572 cgtggcgcagccgcgccgcgt 2662552
>gb|AE011696.1| Xanthomonas axonopodis pv. citri str. 306, section 74 of 469 of the complete genome Length = 11599 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 497 gctggcgtggcgcagccgcgc 517 ||||||||||||||||||||| Sbjct: 9675 gctggcgtggcgcagccgcgc 9695
>gb|AF104108.1| Triticum aestivum small heat shock protein Hsp23.6 mRNA, nuclear gene encoding mitochondrial protein, complete cds Length = 988 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgactacagc 449 ||||| ||||||||||||||||||| Sbjct: 220 cgacgacgacgacgacgactacagc 244
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 501 gcgtggcgcagccgcgccgcg 521 ||||||||||||||||||||| Sbjct: 1562491 gcgtggcgcagccgcgccgcg 1562471
>gb|AY026914.1| Pseudomonas putida strain P111 czrBA operon, partial sequence; ben operon and ant operon, complete sequence; and catRBCA operon, partial sequence; and unknown gene Length = 15769 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 440 cgactacagcaagctaggcgccggc 464 ||||||||||||||| ||||||||| Sbjct: 11004 cgactacagcaagctcggcgccggc 10980
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 502 cgtggcgcagccgcgccgcgt 522 ||||||||||||||||||||| Sbjct: 96529 cgtggcgcagccgcgccgcgt 96549
>gb|AE004678.1| Pseudomonas aeruginosa PAO1, section 239 of 529 of the complete genome Length = 11593 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 440 cgactacagcaagctaggcgccggc 464 ||||||||||||||| ||||||||| Sbjct: 5643 cgactacagcaagctcggcgccggc 5667
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 423 ctcgacggcgacgacgacgac 443 ||||||||||||||||||||| Sbjct: 94577 ctcgacggcgacgacgacgac 94557
>gb|AC149068.4| Mus musculus BAC clone RP23-7G19 from 18, complete sequence Length = 232071 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 425 cgacggcgacgacgacgactacagcaagc 453 ||||| ||||||||||||| ||||||||| Sbjct: 102756 cgacgacgacgacgacgacgacagcaagc 102728
>gb|AF333038.2| Streptomyces viridochromogenes Avilamycin A biosynthetic gene cluster, complete sequence Length = 59816 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 421 agctcgacggcgacgacgacg 441 ||||||||||||||||||||| Sbjct: 4599 agctcgacggcgacgacgacg 4579
>ref|XM_482276.1| Oryza sativa (japonica cultivar-group), mRNA Length = 990 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 867 cgacggcgacgacgacgact 886
>gb|BC103753.1| Homo sapiens RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse)), transcript variant 1, mRNA (cDNA clone MGC:117312 IMAGE:6182358), complete cds Length = 1614 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 85 cgacggcgacgacgacgact 104
>ref|XM_550503.1| Oryza sativa (japonica cultivar-group), mRNA Length = 561 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 192 cgacggcgacgacgacgact 173
>ref|XM_493917.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3414 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 24 cgacggcgacgacgacgact 43
>ref|XM_482535.1| Oryza sativa (japonica cultivar-group), mRNA Length = 969 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 tcgacggcgacgacgacgac 443 |||||||||||||||||||| Sbjct: 211 tcgacggcgacgacgacgac 192
>ref|XM_475998.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 936 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 425 cgacggcgacgacgacgactacagcaag 452 ||||||||||||||||||| || ||||| Sbjct: 222 cgacggcgacgacgacgacgactgcaag 195
>ref|XM_475741.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 429 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 545 ggggaggacgctcaaggggcgcgacctc 572 ||||||||||||||| ||||| |||||| Sbjct: 351 ggggaggacgctcaaagggcgggacctc 378
>ref|XM_465373.1| Oryza sativa (japonica cultivar-group), mRNA Length = 162 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 tcgacggcgacgacgacgac 443 |||||||||||||||||||| Sbjct: 140 tcgacggcgacgacgacgac 121
>ref|NM_193470.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 861 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 ccgcgccggcggccggaaga 312 |||||||||||||||||||| Sbjct: 28 ccgcgccggcggccggaaga 9
>ref|NM_186413.1| Oryza sativa (japonica cultivar-group), mRNA Length = 534 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 tcgacggcgacgacgacgac 443 |||||||||||||||||||| Sbjct: 28 tcgacggcgacgacgacgac 9
>ref|XM_476545.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2319 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 328 ccggcgccgtgcccgggtcgctgc 351 ||||||||||||| |||||||||| Sbjct: 503 ccggcgccgtgccggggtcgctgc 526
>ref|XM_472022.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 624 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 420 gagctcgacggcgacgacgacgac 443 |||||||||| ||||||||||||| Sbjct: 106 gagctcgacgacgacgacgacgac 129
>gb|AC084218.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0001A07, complete sequence Length = 164898 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 8773 cgacggcgacgacgacgact 8792
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 113 gagtgcgaggtcggcggccgcgaa 136 ||||||| |||||||||||||||| Sbjct: 431332 gagtgcgcggtcggcggccgcgaa 431355
>gb|AC111016.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1651_D06, complete sequence Length = 145323 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 422 gctcgacggcgacgacgacgactacagc 449 |||||||| ||||||||||||| ||||| Sbjct: 113523 gctcgacgacgacgacgacgacgacagc 113550
>gb|AC078839.4| Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBa0094J09, complete sequence Length = 168192 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 49633 cgacggcgacgacgacgact 49652
>ref|XM_363313.1| Magnaporthe grisea 70-15 hypothetical protein (MG01239.4) partial mRNA Length = 1077 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgactacagcaag 452 ||||| ||||||||||||| |||||||| Sbjct: 69 cgacgacgacgacgacgaccacagcaag 96
>ref|XM_416778.1| PREDICTED: Gallus gallus similar to BCL-6 corepressor long isoform (LOC418574), mRNA Length = 7545 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 gcggcgctgggcagccccgg 193 |||||||||||||||||||| Sbjct: 4718 gcggcgctgggcagccccgg 4699
>gb|AC150558.1| Drosophila melanogaster clone BACR01N08, complete sequence Length = 174139 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 30144 cgacggcgacgacgacgact 30163
>gb|AC136216.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0022J22, complete sequence Length = 142854 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgactacagcaag 452 ||||||||||||||||||| || ||||| Sbjct: 11391 cgacggcgacgacgacgacgactgcaag 11418
>ref|XM_958982.1| Neurospora crassa OR74A hypothetical protein (NCU02793.1) partial mRNA Length = 32463 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 420 gagctcgacggcgacgacgacgac 443 |||||||||| ||||||||||||| Sbjct: 14671 gagctcgacgacgacgacgacgac 14694
>gb|AC104277.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1264_A04, complete sequence Length = 133271 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 418 gggagctcgacggcgacgacgacg 441 ||||||||||||||| |||||||| Sbjct: 50698 gggagctcgacggcgccgacgacg 50675
>gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0053E05, complete sequence Length = 196284 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 545 ggggaggacgctcaaggggcgcgacctc 572 ||||||||||||||| ||||| |||||| Sbjct: 12927 ggggaggacgctcaaagggcgggacctc 12954
>ref|XM_329980.1| Neurospora crassa OR74A hypothetical protein (NCU02793.1) partial mRNA Length = 32463 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 420 gagctcgacggcgacgacgacgac 443 |||||||||| ||||||||||||| Sbjct: 14671 gagctcgacgacgacgacgacgac 14694
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 cgcccgcgccggcggccgga 309 |||||||||||||||||||| Sbjct: 2204458 cgcccgcgccggcggccgga 2204439
>gb|AC105260.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_D04, complete sequence Length = 100800 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgactacagcaag 452 ||||||||||||||||||| || ||||| Sbjct: 54156 cgacggcgacgacgacgacgactgcaag 54183
>gb|AC136523.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0018C06, complete sequence Length = 179695 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 ggagctcgacggcgacgacg 438 |||||||||||||||||||| Sbjct: 118368 ggagctcgacggcgacgacg 118387
>gb|DQ172833.1| Pseudomonas fluorescens transcriptional activator (antR) gene, partial cds; and ant operon, partial sequence Length = 4324 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 441 gactacagcaagctaggcgccggc 464 |||||||||||||| ||||||||| Sbjct: 2055 gactacagcaagctcggcgccggc 2078
>gb|AC111015.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1131_E09, complete sequence Length = 94399 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 545 ggggaggacgctcaaggggcgcgacctc 572 ||||||||||||||| ||||| |||||| Sbjct: 79219 ggggaggacgctcaaagggcgggacctc 79246
>gb|AC135000.2| Homo sapiens 3 BAC RP11-483E7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 70753 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 538 agggggtggggaggacgctcaagg 561 |||||||||||||||| ||||||| Sbjct: 16537 agggggtggggaggacactcaagg 16560
>ref|NM_016732.1| Homo sapiens RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse)) (RALY), transcript variant 1, mRNA Length = 1589 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 64 cgacggcgacgacgacgact 83
>ref|NM_007367.2| Homo sapiens RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse)) (RALY), transcript variant 2, mRNA Length = 1541 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 64 cgacggcgacgacgacgact 83
>ref|XM_499723.1| Yarrowia lipolytica CLIB122, YALI0A03399g predicted mRNA Length = 2055 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 420 gagctcgacggcgacgacgacgac 443 |||||||||| ||||||||||||| Sbjct: 1642 gagctcgacgacgacgacgacgac 1665
>ref|XM_502895.1| Yarrowia lipolytica CLIB122, YALI0D16313g predicted mRNA Length = 3642 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 420 gagctcgacggcgacgacgacgac 443 ||||| |||||||||||||||||| Sbjct: 3166 gagctggacggcgacgacgacgac 3189
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 157 cgccgtcccggagcgcggcggcgc 180 ||||||||||| |||||||||||| Sbjct: 1779617 cgccgtcccggggcgcggcggcgc 1779640 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 504 tggcgcagccgcgccgcgtc 523 |||||||||||||||||||| Sbjct: 473486 tggcgcagccgcgccgcgtc 473467
>emb|AL034549.19|HS1125A11 Human DNA sequence from clone RP5-1125A11 on chromosome 20q11.1-11.23 Contains the TPM5P gene for tropomyosin 5 pseudogene, a novel gene, the 3' end of a novel gene, the 5' end of the RALY gene for RNA binding protein (autoantigenic, hnRNP-associated with lethal yellow), a Down syndrome critical region gene 5 (DSCR5) pseudogene and two CpG islands, complete sequence Length = 155567 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 133242 cgacggcgacgacgacgact 133261
>emb|Y07706.1|SCMALREFG S.coelicolor malR, malE, malF and malG genes Length = 5010 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 507 cgcagccgcgccgcgtccct 526 |||||||||||||||||||| Sbjct: 4118 cgcagccgcgccgcgtccct 4137
>emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete genome; segment 11/16 Length = 349442 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 gcgaggtcggcggccgcgaa 136 |||||||||||||||||||| Sbjct: 27680 gcgaggtcggcggccgcgaa 27699
>emb|BX640428.1| Bordetella parapertussis strain 12822, complete genome; segment 6/14 Length = 348525 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 gcgaggtcggcggccgcgaa 136 |||||||||||||||||||| Sbjct: 207644 gcgaggtcggcggccgcgaa 207625
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 cgcccgcgccggcggccgga 309 |||||||||||||||||||| Sbjct: 2170178 cgcccgcgccggcggccgga 2170197
>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29 Length = 321250 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 507 cgcagccgcgccgcgtccct 526 |||||||||||||||||||| Sbjct: 295765 cgcagccgcgccgcgtccct 295746
>emb|AL731624.3|OSJN00266 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0091C07, complete sequence Length = 138383 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 420 gagctcgacggcgacgacgacgac 443 |||||||||| ||||||||||||| Sbjct: 68212 gagctcgacgacgacgacgacgac 68235
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 gactacagcaagctaggcgccggc 464 |||||||||||||| ||||||||| Sbjct: 885198 gactacagcaagctcggcgccggc 885175
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 504 tggcgcagccgcgccgcgtc 523 |||||||||||||||||||| Sbjct: 335307 tggcgcagccgcgccgcgtc 335326
>emb|CR625534.1| full-length cDNA clone CS0DF038YF22 of Fetal brain of Homo sapiens (human) Length = 1706 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 246 cgacggcgacgacgacgact 265
>emb|CR623780.1| full-length cDNA clone CS0DC003YF16 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1434 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 66 cgacggcgacgacgacgact 85
>emb|CR622300.1| full-length cDNA clone CS0DC003YJ22 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1433 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 66 cgacggcgacgacgacgact 85
>emb|CR620280.1| full-length cDNA clone CS0DL002YO08 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1547 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 67 cgacggcgacgacgacgact 86
>emb|CR617105.1| full-length cDNA clone CS0DI075YL22 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1501 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 67 cgacggcgacgacgacgact 86
>emb|CR615528.1| full-length cDNA clone CS0DI063YA17 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1516 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 30 cgacggcgacgacgacgact 49
>emb|CR615132.1| full-length cDNA clone CS0DI081YO16 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1553 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 67 cgacggcgacgacgacgact 86
>emb|CR614904.1| full-length cDNA clone CS0DF007YF13 of Fetal brain of Homo sapiens (human) Length = 1574 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 93 cgacggcgacgacgacgact 112
>emb|CR613686.1| full-length cDNA clone CS0DK010YB22 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1667 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 204 cgacggcgacgacgacgact 223
>emb|CR613485.1| full-length cDNA clone CS0DK005YP23 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1791 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 311 cgacggcgacgacgacgact 330
>emb|CR609461.1| full-length cDNA clone CS0DK006YE09 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1713 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 252 cgacggcgacgacgacgact 271
>emb|CR612346.1| full-length cDNA clone CS0DA008YF04 of Neuroblastoma of Homo sapiens (human) Length = 1694 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 213 cgacggcgacgacgacgact 232
>emb|CR606402.1| full-length cDNA clone CS0DI064YN17 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1501 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 20 cgacggcgacgacgacgact 39
>emb|CR604151.1| full-length cDNA clone CS0DI007YH05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1744 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 283 cgacggcgacgacgacgact 302
>emb|CR603257.1| full-length cDNA clone CS0DB001YP12 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1694 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 215 cgacggcgacgacgacgact 234
>emb|CR600862.1| full-length cDNA clone CS0DI064YP08 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1479 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 27 cgacggcgacgacgacgact 46
>emb|CR599587.1| full-length cDNA clone CS0DI033YM20 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1495 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 66 cgacggcgacgacgacgact 85
>emb|CR599150.1| full-length cDNA clone CS0DA010YJ20 of Neuroblastoma of Homo sapiens (human) Length = 1769 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 277 cgacggcgacgacgacgact 296
>emb|CR597090.1| full-length cDNA clone CS0DK010YO17 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1548 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 67 cgacggcgacgacgacgact 86
>emb|CR596751.1| full-length cDNA clone CS0DC028YL10 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1593 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 126 cgacggcgacgacgacgact 145
>emb|CR596021.1| full-length cDNA clone CS0DI057YH17 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1533 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 37 cgacggcgacgacgacgact 56
>emb|CR595464.1| full-length cDNA clone CS0DM001YD17 of Fetal liver of Homo sapiens (human) Length = 1577 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 113 cgacggcgacgacgacgact 132
>gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome Length = 2839318 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 131 cgcgaagcacgcgtaccggatgttcacg 158 ||||||||| ||||||||||| |||||| Sbjct: 2411280 cgcgaagcatgcgtaccggatcttcacg 2411253
>gb|AC161867.6| Mus musculus chromosome 8, clone RP24-281E22, complete sequence Length = 180410 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 537 gagggggtggggaggacgct 556 |||||||||||||||||||| Sbjct: 24257 gagggggtggggaggacgct 24238
>emb|CR386584.1| Gallus gallus finished cDNA, clone ChEST763a6 Length = 772 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 gagcgcggcggcgctgggca 186 |||||||||||||||||||| Sbjct: 591 gagcgcggcggcgctgggca 610
>gb|AC016779.5| Genomic sequence for Oryza sativa clone 10N6, complete sequence Length = 140234 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 53411 cgacggcgacgacgacgact 53392
>gb|AC092398.1|AC092398 Drosophila melanogaster, chromosome 2L, region 36X-36X, BAC clone BACR03G19, complete sequence Length = 165839 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 30144 cgacggcgacgacgacgact 30163
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 325 atgccggcgccgtgcccgggtcgc 348 ||||||||| |||||||||||||| Sbjct: 1300885 atgccggcgacgtgcccgggtcgc 1300908
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 tcgacggcgacgacgacgac 443 |||||||||||||||||||| Sbjct: 20924090 tcgacggcgacgacgacgac 20924071 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 19178980 cgacggcgacgacgacgact 19178999
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 425 cgacggcgacgacgacgactacag 448 ||||| |||||||||||||||||| Sbjct: 16839984 cgacgacgacgacgacgactacag 16839961 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 tcgacggcgacgacgacgac 443 |||||||||||||||||||| Sbjct: 3345643 tcgacggcgacgacgacgac 3345624 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 328 ccggcgccgtgcccgggtcgctgc 351 ||||||||||||| |||||||||| Sbjct: 1884211 ccggcgccgtgccggggtcgctgc 1884234
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 845896 cgacggcgacgacgacgact 845915
>dbj|AK222915.1| Homo sapiens mRNA for RNA binding protein (autoantigenic, hnRNP-associated with lethal yellow) long isoform variant, clone: HRC04171 Length = 1553 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 24 cgacggcgacgacgacgact 43
>dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1144D11 Length = 157943 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 ccgcgccggcggccggaaga 312 |||||||||||||||||||| Sbjct: 27309 ccgcgccggcggccggaaga 27328
>dbj|AP003372.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1014_G12 Length = 158830 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 ccgcgccggcggccggaaga 312 |||||||||||||||||||| Sbjct: 122966 ccgcgccggcggccggaaga 122985
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 gagcgggtcggttgtaccgc 489 |||||||||||||||||||| Sbjct: 2694842 gagcgggtcggttgtaccgc 2694861
>dbj|AP005839.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0044K01 Length = 160643 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 tcgacggcgacgacgacgac 443 |||||||||||||||||||| Sbjct: 94523 tcgacggcgacgacgacgac 94504
>dbj|AP003868.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1111_B08 Length = 131184 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 tcgacggcgacgacgacgac 443 |||||||||||||||||||| Sbjct: 102391 tcgacggcgacgacgacgac 102372
>dbj|AP001389.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0541H01 Length = 157519 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 129030 cgacggcgacgacgacgact 129049
>gb|AC007375.6|AC007375 Homo sapiens chromosome 14 clone RP11-463C8 containing POMT2 gene, partial cds; and unknown genes, complete sequence Length = 180331 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 ccaaatccatttccctcctc 27 |||||||||||||||||||| Sbjct: 31589 ccaaatccatttccctcctc 31570
>dbj|AP002837.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0019F11 Length = 123673 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 26791 cgacggcgacgacgacgact 26810
>dbj|AB088420.1| Pseudomonas resinovorans plasmid pCAR1, complete sequence Length = 199035 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 441 gactacagcaagctaggcgccggc 464 |||||||||||||| ||||||||| Sbjct: 27265 gactacagcaagctcggcgccggc 27288 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 gactacagcaagctaggcgccggc 464 |||||||||||||| ||||||||| Sbjct: 6731 gactacagcaagctcggcgccggc 6708
>dbj|AB047548.1| Pseudomonas resinovorans strain CA10 DNA, car gene cluster flanking region Length = 44266 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 441 gactacagcaagctaggcgccggc 464 |||||||||||||| ||||||||| Sbjct: 27287 gactacagcaagctcggcgccggc 27310 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 gactacagcaagctaggcgccggc 464 |||||||||||||| ||||||||| Sbjct: 6734 gactacagcaagctcggcgccggc 6711
>dbj|AB094786.1| Pseudomonas sp. K23 car operon (ORF14K23L, ORFU1K23L, ORF12K23L, ORF11K23L, ORF10K23L, ORF9K23L, ORF4K23L), partial and complete cds Length = 8096 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 441 gactacagcaagctaggcgccggc 464 |||||||||||||| ||||||||| Sbjct: 6072 gactacagcaagctcggcgccggc 6095
>dbj|AP004347.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0675B10 Length = 136229 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 425 cgacggcgacgacgacgactacag 448 ||||| |||||||||||||||||| Sbjct: 15738 cgacgacgacgacgacgactacag 15715
>dbj|AP004338.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0507H12 Length = 143030 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 328 ccggcgccgtgcccgggtcgctgc 351 ||||||||||||| |||||||||| Sbjct: 88790 ccggcgccgtgccggggtcgctgc 88813
>dbj|AP003806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1103_E04 Length = 111354 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 425 cgacggcgacgacgacgactacag 448 ||||| |||||||||||||||||| Sbjct: 56551 cgacgacgacgacgacgactacag 56528
>gb|AE004970.1| Halobacterium sp. NRC-1 section 1 of 170 of the complete genome Length = 12825 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cgtcccggagcgcggcggcg 179 |||||||||||||||||||| Sbjct: 6158 cgtcccggagcgcggcggcg 6177
>dbj|AP004856.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1570_H12 Length = 129767 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 tcgacggcgacgacgacgac 443 |||||||||||||||||||| Sbjct: 107441 tcgacggcgacgacgacgac 107460
>dbj|AP004151.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1008_E02 Length = 125860 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 tcgacggcgacgacgacgac 443 |||||||||||||||||||| Sbjct: 12571 tcgacggcgacgacgacgac 12590
>dbj|AK119749.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-165-H11, full insert sequence Length = 2962 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 420 gagctcgacggcgacgacgacgac 443 |||||||||| ||||||||||||| Sbjct: 2197 gagctcgacgacgacgacgacgac 2220
>dbj|AK120817.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023015A03, full insert sequence Length = 2133 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 420 gagctcgacggcgacgacgacgac 443 |||||||||| ||||||||||||| Sbjct: 1016 gagctcgacgacgacgacgacgac 993
>dbj|AP005388.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0086F04 Length = 163579 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 101345 cgacggcgacgacgacgact 101364
>dbj|AK111455.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-183-C03, full insert sequence Length = 1686 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgactacag 448 ||||| |||||||||||||||||| Sbjct: 1456 cgacgacgacgacgacgactacag 1479
>dbj|AK110577.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-E05, full insert sequence Length = 1739 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 420 gagctcgacggcgacgacgacgac 443 |||||||||| ||||||||||||| Sbjct: 624 gagctcgacgacgacgacgacgac 647
>dbj|AK109325.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-H07, full insert sequence Length = 744 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 545 ggggaggacgctcaaggggcgcgacctc 572 ||||||||||||||| ||||| |||||| Sbjct: 396 ggggaggacgctcaaagggcgggacctc 423
>dbj|AK106741.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-B04, full insert sequence Length = 1640 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 tcgacggcgacgacgacgac 443 |||||||||||||||||||| Sbjct: 1314 tcgacggcgacgacgacgac 1333
>dbj|AK105542.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-H11, full insert sequence Length = 1340 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgactacagcaag 452 ||||||||||||||||||| || ||||| Sbjct: 980 cgacggcgacgacgacgacgactgcaag 1007
>dbj|AK103395.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033127M23, full insert sequence Length = 872 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 420 gagctcgacggcgacgacgacgac 443 |||||||||| ||||||||||||| Sbjct: 226 gagctcgacgacgacgacgacgac 249
>dbj|AK100732.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023117L05, full insert sequence Length = 4000 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 236 cgacggcgacgacgacgact 255
>dbj|AK071346.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023093D11, full insert sequence Length = 561 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 192 cgacggcgacgacgacgact 173
>dbj|AK068595.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154K05, full insert sequence Length = 1104 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 425 cgacggcgacgacgacgactacagcaag 452 ||||||||||||||||||| || ||||| Sbjct: 264 cgacggcgacgacgacgacgactgcaag 237
>gb|AF148457.1|AF148457 Homo sapiens heterogeneous nuclear ribonucleoprotein, alternate transcript (RALY) mRNA, complete cds Length = 1589 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 64 cgacggcgacgacgacgact 83
>dbj|AK059813.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-B05, full insert sequence Length = 1128 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 425 cgacggcgacgacgacgactacagcaag 452 ||||||||||||||||||| || ||||| Sbjct: 325 cgacggcgacgacgacgacgactgcaag 298
>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1714_H10 Length = 191580 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 tcgacggcgacgacgacgac 443 |||||||||||||||||||| Sbjct: 155336 tcgacggcgacgacgacgac 155317
>gb|AC108915.12| Mus musculus chromosome 8, clone RP23-444O13, complete sequence Length = 178228 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 537 gagggggtggggaggacgct 556 |||||||||||||||||||| Sbjct: 152392 gagggggtggggaggacgct 152373
>gb|AE003650.2| Drosophila melanogaster chromosome 2L, section 59 of 83 of the complete sequence Length = 273414 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 cgacggcgacgacgacgact 444 |||||||||||||||||||| Sbjct: 230338 cgacggcgacgacgacgact 230357
>emb|AL713936.4|CNS07YPH Oryza sativa chromosome 12, . BAC OJ1057_G11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 109081 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 420 gagctcgacggcgacgacgacgac 443 |||||||||| ||||||||||||| Sbjct: 108148 gagctcgacgacgacgacgacgac 108125
>emb|BX072545.2|CNS09S4O Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0046P17 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 7353 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 420 gagctcgacggcgacgacgacgac 443 |||||||||| ||||||||||||| Sbjct: 1069 gagctcgacgacgacgacgacgac 1046
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 420 gagctcgacggcgacgacgacgac 443 ||||| |||||||||||||||||| Sbjct: 2015023 gagctggacggcgacgacgacgac 2015000
>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica Length = 2303261 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 420 gagctcgacggcgacgacgacgac 443 |||||||||| ||||||||||||| Sbjct: 378717 gagctcgacgacgacgacgacgac 378694
>gb|AC105262.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1489_G03, complete sequence Length = 107870 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 418 gggagctcgacggcgacgacgacg 441 ||||||||||||||| |||||||| Sbjct: 103013 gggagctcgacggcgccgacgacg 102990 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,310,305 Number of Sequences: 3902068 Number of extensions: 3310305 Number of successful extensions: 106211 Number of sequences better than 10.0: 172 Number of HSP's better than 10.0 without gapping: 185 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 99509 Number of HSP's gapped (non-prelim): 6690 length of query: 588 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 565 effective length of database: 17,143,297,704 effective search space: 9685963202760 effective search space used: 9685963202760 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
