ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart56e04 |
|---|---|
| Clone Library Name | barley_pub |
>HD2B_MAIZE (Q9M4U5) Histone deacetylase 2b (HD2b) (Zm-HD2b)| Length = 303 Score = 148 bits (373), Expect = 8e-36 Identities = 81/146 (55%), Positives = 93/146 (63%) Frame = +2 Query: 26 MEFWGLEVKPNQSIKVSPEDDHFLHLSQAALGEVKKDDKTTLFVKVDGGQKLAIGTLSMD 205 MEFWGLEVKP ++K P LH+SQAALGE KK D ++VKVD +KLAIGTLS+D Sbjct: 1 MEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKKSDSALMYVKVDD-KKLAIGTLSID 59 Query: 206 KFPQIQFDLVFEKEFELSHNSKTTSVFFSGYNVFQPAQGXXXXXXXXXXXXXXXXXXPII 385 K+PQIQFDLVF KEFELSH SKTTSVFFSGY V QP +G P+I Sbjct: 60 KYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQPIEG--DEMDLDSEDEEEELNIPVI 117 Query: 386 PAVAKENGKPEAKEQKKQVLIDAGSS 463 K +GK E K Q+K V A S Sbjct: 118 KENGKADGKEEQKNQEKAVAATASKS 143
>HD2C_MAIZE (Q9M4U4) Histone deacetylase 2c (HD2c) (Zm-HD2c)| Length = 300 Score = 144 bits (362), Expect = 1e-34 Identities = 82/148 (55%), Positives = 95/148 (64%) Frame = +2 Query: 26 MEFWGLEVKPNQSIKVSPEDDHFLHLSQAALGEVKKDDKTTLFVKVDGGQKLAIGTLSMD 205 MEFWGLEVKP ++K P LHLSQAALGE KK D ++VK+D QKLAIGTLS+D Sbjct: 1 MEFWGLEVKPGSTVKCEPGYGFVLHLSQAALGESKKSDNALMYVKIDD-QKLAIGTLSVD 59 Query: 206 KFPQIQFDLVFEKEFELSHNSKTTSVFFSGYNVFQPAQGXXXXXXXXXXXXXXXXXXPII 385 K P IQFDL+F+KEFELSH SKTTSVFF+GY V QP + + Sbjct: 60 KNPHIQFDLIFDKEFELSHTSKTTSVFFTGYKVEQPFEEDEMDLDSEDEDEELN-----V 114 Query: 386 PAVAKENGKPEAKEQKKQVLIDAGSSKS 469 PAV KENGK + K+QK Q A SKS Sbjct: 115 PAV-KENGKADEKKQKSQEKAVAAPSKS 141
>HD2A_MAIZE (O24591) Histone deacetylase 2a (HD2a) (Zm-HD2a) (Nucleolar histone| deacetylase HD2-p39) Length = 307 Score = 142 bits (358), Expect = 4e-34 Identities = 80/148 (54%), Positives = 93/148 (62%) Frame = +2 Query: 26 MEFWGLEVKPNQSIKVSPEDDHFLHLSQAALGEVKKDDKTTLFVKVDGGQKLAIGTLSMD 205 MEFWGLEVKP ++K P LHLSQAALGE KK D ++VK+D QKLAIGTLS+D Sbjct: 1 MEFWGLEVKPGSTVKCEPGYGFVLHLSQAALGESKKSDNALMYVKIDD-QKLAIGTLSVD 59 Query: 206 KFPQIQFDLVFEKEFELSHNSKTTSVFFSGYNVFQPAQGXXXXXXXXXXXXXXXXXXPII 385 K P IQFDL+F+KEFELSH SKTTSVFF+GY V QP + + Sbjct: 60 KNPHIQFDLIFDKEFELSHTSKTTSVFFTGYKVEQPFE------EDEMDLDSEDEDEELN 113 Query: 386 PAVAKENGKPEAKEQKKQVLIDAGSSKS 469 V KENGK + K+QK Q A SKS Sbjct: 114 VPVVKENGKADEKKQKSQEKAVAAPSKS 141
>HD2A_SOLCH (Q6V9I6) Histone deacetylase 2a (HD2a) (ScHD2a)| Length = 269 Score = 110 bits (275), Expect = 2e-24 Identities = 61/138 (44%), Positives = 80/138 (57%), Gaps = 1/138 (0%) Frame = +2 Query: 26 MEFWGLEVKPNQSIKVSPEDDHFLHLSQAALGEVKKDDKTTLFVKVD-GGQKLAIGTLSM 202 MEFWG EVK + + V P D LHLSQA+LGE+KKD ++ + V+ G+KL +GTL+ Sbjct: 1 MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKSESVCLSVNIDGKKLVLGTLNS 60 Query: 203 DKFPQIQFDLVFEKEFELSHNSKTTSVFFSGYNVFQPAQGXXXXXXXXXXXXXXXXXXPI 382 +K PQ QFDLVF+++FELSHN K+ SV+F GY P + Sbjct: 61 EKVPQQQFDLVFDRDFELSHNLKSGSVYFFGYKATNPFEEEEDDEDDYDESDED------ 114 Query: 383 IPAVAKENGKPEAKEQKK 436 IP +GKPE KE K Sbjct: 115 IPLTLANSGKPEPKEAGK 132
>HD2B_ARATH (Q56WH4) Histone deacetylase 2b (HD-tuins protein 2)| Length = 306 Score = 102 bits (255), Expect = 4e-22 Identities = 49/91 (53%), Positives = 62/91 (68%) Frame = +2 Query: 26 MEFWGLEVKPNQSIKVSPEDDHFLHLSQAALGEVKKDDKTTLFVKVDGGQKLAIGTLSMD 205 MEFWG+ V P + KV+PE+D +H+SQA+L K ++ + GG KL IGTLS D Sbjct: 1 MEFWGVAVTPKNATKVTPEEDSLVHISQASLDCTVKSGESVVLSVTVGGAKLVIGTLSQD 60 Query: 206 KFPQIQFDLVFEKEFELSHNSKTTSVFFSGY 298 KFPQI FDLVF+KEFELSH+ +V F GY Sbjct: 61 KFPQISFDLVFDKEFELSHSGTKANVHFIGY 91
>HD2A_SOYBN (Q8LJS2) Histone deacetylase 2a (HD2a) (Nucleolar histone| deacetylase HD2-p39) Length = 295 Score = 100 bits (250), Expect = 1e-21 Identities = 58/144 (40%), Positives = 78/144 (54%), Gaps = 5/144 (3%) Frame = +2 Query: 26 MEFWGLEVKPNQSIKVSPED--DHFLHLSQAALGEVKKD---DKTTLFVKVDGGQKLAIG 190 MEFWG+EVK Q++ V P D D ++H+SQ ALGE KKD + L++KV G QK+ +G Sbjct: 1 MEFWGVEVKVGQTVTVDPMDPVDSYIHISQVALGEAKKDKPNEPVVLYLKV-GEQKIVLG 59 Query: 191 TLSMDKFPQIQFDLVFEKEFELSHNSKTTSVFFSGYNVFQPAQGXXXXXXXXXXXXXXXX 370 TLS D P + DLV + + ELSH SK+ SVFF GY V Sbjct: 60 TLSRDGIPHLSLDLVLDSDSELSHTSKSASVFFCGYKVLTGNDNASDFSDSSEEDEE--- 116 Query: 371 XXPIIPAVAKENGKPEAKEQKKQV 442 + ++NGKPE K + +V Sbjct: 117 ----LALEGQDNGKPELKAEGAKV 136
>HD2A_ARATH (Q9FVE6) Histone deacetylase 2a (HD-tuins protein 1)| Length = 245 Score = 92.0 bits (227), Expect = 7e-19 Identities = 49/93 (52%), Positives = 63/93 (67%), Gaps = 2/93 (2%) Frame = +2 Query: 26 MEFWGLEVKPNQSIKVSPEDDHFLHLSQAALGEVK--KDDKTTLFVKVDGGQKLAIGTLS 199 MEFWG+EVK + + V+PE+ +H+SQA+LGE K K + L VKV G Q L +GTLS Sbjct: 1 MEFWGIEVKSGKPVTVTPEEGILIHVSQASLGECKNKKGEFVPLHVKV-GNQNLVLGTLS 59 Query: 200 MDKFPQIQFDLVFEKEFELSHNSKTTSVFFSGY 298 + PQ+ DLVF+KEFELSH SV+F GY Sbjct: 60 TENIPQLFCDLVFDKEFELSHTWGKGSVYFVGY 92
>HD2C_ARATH (Q9LZR5) Histone deacetylase 2c (HD-tuins protein 3)| Length = 294 Score = 90.5 bits (223), Expect = 2e-18 Identities = 48/95 (50%), Positives = 62/95 (65%), Gaps = 2/95 (2%) Frame = +2 Query: 26 MEFWGLEVKPNQSIKVSPEDDHFLHLSQAALGEVKKD--DKTTLFVKVDGGQKLAIGTLS 199 MEFWG+EVK + + + P D +H+SQ ALGE K + + L+V V G KL IGTLS Sbjct: 1 MEFWGVEVKNGKPLHLDPGLDRLVHISQVALGESKNNVTEPIQLYVTV-GSDKLLIGTLS 59 Query: 200 MDKFPQIQFDLVFEKEFELSHNSKTTSVFFSGYNV 304 +KFPQ+ ++V E+ F LSH K SVFFSGY V Sbjct: 60 HEKFPQLSTEIVLERNFALSHTWKNGSVFFSGYKV 94
>HD2D_ARATH (Q9M4T3) Histone deacetylase 2d (HD-tuins protein 4)| Length = 203 Score = 82.0 bits (201), Expect = 7e-16 Identities = 46/98 (46%), Positives = 59/98 (60%), Gaps = 4/98 (4%) Frame = +2 Query: 26 MEFWGLEVKPNQSIKVSPEDDHFLHLSQAALGE---VKKDDKTTLFVKV-DGGQKLAIGT 193 MEFWG+E+KP + KV +D +H SQ LG+ VKKD+ ++VK+ D IG Sbjct: 1 MEFWGIEIKPGKPFKVIQKDGFMVHASQVTLGDVEKVKKDETFAVYVKIGDDENGFMIGN 60 Query: 194 LSMDKFPQIQFDLVFEKEFELSHNSKTTSVFFSGYNVF 307 LS KFPQ DL EFE+SHNS T+SV+ GY F Sbjct: 61 LS-QKFPQFSIDLYLGHEFEISHNS-TSSVYLIGYRTF 96
>FKBP4_SPOFR (Q26486) 46 kDa FK506-binding nuclear protein (EC 5.2.1.8)| (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) Length = 412 Score = 35.8 bits (81), Expect = 0.056 Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 1/90 (1%) Frame = +2 Query: 32 FWGLEVKPNQSIKVSPEDDHFLHLSQAALGEVKKDDKTTLFVKVDGGQKLAIGTLSMDKF 211 FWGL ++PN+ E H+SQAA+ D+ + V G+ + TL K Sbjct: 2 FWGLIMEPNKRYTQVVEKP--FHISQAAMDISTGDNDPCQVMVVVDGKNFLVCTLQKGKI 59 Query: 212 PQIQFDLVFEKEFELSH-NSKTTSVFFSGY 298 Q+ DL F+ +S + +V +GY Sbjct: 60 IQVPLDLYFKSGDSVSFLTNGKCNVHLTGY 89
>VIT5_CAEEL (P06125) Vitellogenin 5 precursor| Length = 1603 Score = 32.7 bits (73), Expect = 0.47 Identities = 13/30 (43%), Positives = 20/30 (66%) Frame = +2 Query: 176 KLAIGTLSMDKFPQIQFDLVFEKEFELSHN 265 ++ IG L +I+FD +FEKEF+L +N Sbjct: 1023 RVTIGNLEKTDLSEIKFDKIFEKEFDLENN 1052
>VIT4_CAEEL (P18947) Vitellogenin 4 precursor| Length = 1603 Score = 32.7 bits (73), Expect = 0.47 Identities = 13/30 (43%), Positives = 20/30 (66%) Frame = +2 Query: 176 KLAIGTLSMDKFPQIQFDLVFEKEFELSHN 265 ++ IG L +I+FD +FEKEF+L +N Sbjct: 1023 RVTIGNLEKTDLSEIKFDKIFEKEFDLENN 1052
>VIT3_CAEEL (Q9N4J2) Vitellogenin 3 precursor| Length = 1603 Score = 32.7 bits (73), Expect = 0.47 Identities = 13/30 (43%), Positives = 20/30 (66%) Frame = +2 Query: 176 KLAIGTLSMDKFPQIQFDLVFEKEFELSHN 265 ++ IG L +I+FD +FEKEF+L +N Sbjct: 1023 RVTIGNLEKTDLSEIKFDKIFEKEFDLENN 1052
>VIT2_CAEEL (P05690) Vitellogenin 2 precursor| Length = 1613 Score = 32.3 bits (72), Expect = 0.62 Identities = 22/79 (27%), Positives = 37/79 (46%) Frame = +2 Query: 32 FWGLEVKPNQSIKVSPEDDHFLHLSQAALGEVKKDDKTTLFVKVDGGQKLAIGTLSMDKF 211 F GLEV +I +++L Q V+ ++ F +L +G L + Sbjct: 982 FLGLEVSTRGNILNQHTLENWLLAEQDFEVSVENKNRPAEFTA-----RLTVGQLEKTEL 1036 Query: 212 PQIQFDLVFEKEFELSHNS 268 QI+++ +FEKEFEL + Sbjct: 1037 SQIKYNKIFEKEFELEQEN 1055
>VIT1_CAEEL (P55155) Vitellogenin 1 precursor| Length = 1616 Score = 32.0 bits (71), Expect = 0.80 Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 1/88 (1%) Frame = +2 Query: 32 FWGLEVKPNQSIKVSPEDDHFLHLSQAALGEVKKDDKTTLFVKVDGGQKLAIGTLSMDKF 211 F GLEV +I +++L Q EV ++K + + +L +G L + Sbjct: 984 FLGLEVSTRGNILNQHTLENWLLAEQDF--EVSVENK---YRPAEFTARLTVGQLEKTEL 1038 Query: 212 PQIQFDLVFEKEFEL-SHNSKTTSVFFS 292 QI+++ +FEKEFEL N+++ +F+ Sbjct: 1039 SQIKYNKIFEKEFELEQENTESRREYFT 1066
>LIFR_HUMAN (P42702) Leukemia inhibitory factor receptor precursor (LIF| receptor) (LIF-R) (CD118 antigen) Length = 1097 Score = 30.8 bits (68), Expect = 1.8 Identities = 15/44 (34%), Positives = 22/44 (50%) Frame = -2 Query: 195 RVPMASFWPPSTLTNKVVLSSFLTSPRAAWERWRKWSSSGETLM 64 R +FW S +NK + SP + WR+WSS G+ L+ Sbjct: 510 RCSTETFWKWSKWSNKKQHLTTEASPSKGPDTWREWSSDGKNLI 553
>LEU2_AZOVI (P96195) 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 470 Score = 30.0 bits (66), Expect = 3.1 Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 4/39 (10%) Frame = -2 Query: 123 SPRAAWERW----RKWSSSGETLMDWLGLTSRPQNSMAT 19 SPRA+ RW WS S W G +SRP +S AT Sbjct: 369 SPRASSRRWWCRAPGWSRSRRRRRGWTGSSSRPVSSGAT 407
>LBX1_HUMAN (P52954) Transcription factor LBX1| Length = 280 Score = 30.0 bits (66), Expect = 3.1 Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 10/63 (15%) Frame = -2 Query: 159 LTNKVVLSSF----------LTSPRAAWERWRKWSSSGETLMDWLGLTSRPQNSMATDGG 10 LTN V++ F L +A E +K SG+ MD + L QNS AT GG Sbjct: 163 LTNAQVITWFQNRRAKLKRELEEMKADVESPKKLGPSGQ--MDIVALAELEQNSEATAGG 220 Query: 9 GGG 1 GGG Sbjct: 221 GGG 223
>C8AP2_MOUSE (Q9WUF3) CASP8-associated protein 2 (FLICE-associated huge protein)| Length = 1962 Score = 30.0 bits (66), Expect = 3.1 Identities = 30/107 (28%), Positives = 43/107 (40%), Gaps = 18/107 (16%) Frame = -3 Query: 356 QTHLQNQNPSHLPGQVGKHCSQRRRRLLSWNCVTAQIPFR----------RRGRTGSEGT 207 ++H + QNP HL V KHC+ N V ++ P++ RRGR+G+ Sbjct: 197 KSHSEAQNPLHLSTGVEKHCA---------NNVWSRSPYQVGEGNSNEDNRRGRSGT--- 244 Query: 206 CP*RGSRWLASGRRRP*QTRLSCHPS*PH--------QGQPGRDGGS 90 R S+ R SC+ S P QG P + G S Sbjct: 245 ---RHSQCSRGTDRTQKDLHSSCNDSEPRDKEANSRLQGHPEKHGNS 288
>RPTN_MOUSE (P97347) Repetin| Length = 1130 Score = 29.6 bits (65), Expect = 4.0 Identities = 30/102 (29%), Positives = 41/102 (40%), Gaps = 7/102 (6%) Frame = -3 Query: 356 QTHLQNQNPSHLPGQVGK-----HCSQRRRRLLSWNCVTAQIPFRRRGRTGSEGTCP*RG 192 Q H Q + GQ G+ H Q+ R+ LS +G+ G + P G Sbjct: 643 QGHKDRQGQNTHQGQKGRQDLSSHQGQKGRQDLS----------PHQGQKGRQDQSPHLG 692 Query: 191 SRWLASGR--RRP*QTRLSCHPS*PHQGQPGRDGGSGHLQEK 72 + GR + P Q + H PHQGQ GR S H +K Sbjct: 693 QK----GRHDQSPHQGQKGRHDQSPHQGQKGRQDLSSHQGQK 730
>QUEA_PHOPR (Q6LU70) S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC| 5.-.-.-) (Queuosine biosynthesis protein queA) Length = 351 Score = 29.3 bits (64), Expect = 5.2 Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 1/81 (1%) Frame = +2 Query: 59 QSIKVSPEDDHFLHLSQAALGEVKKDDKTTLFVKVDGGQKLAIGTLSMDKFPQIQFDLVF 238 Q ++V DDH +H + + D K +GG+ +A+GT S+ D V Sbjct: 213 QPVRVDNIDDHHMHSEYVEVPQDVVDAVNA--TKANGGRIIAVGTTSVRSLESAAQDAV- 269 Query: 239 EKEFELSHNSKTTSVF-FSGY 298 +K EL T +F F GY Sbjct: 270 KKGTELVPFFGDTEIFIFPGY 290
>LBX1_MOUSE (P52955) Transcription factor LBX1| Length = 280 Score = 29.3 bits (64), Expect = 5.2 Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 10/63 (15%) Frame = -2 Query: 159 LTNKVVLSSF----------LTSPRAAWERWRKWSSSGETLMDWLGLTSRPQNSMATDGG 10 LTN V++ F L +A E +K SG+ MD + L QNS A+ GG Sbjct: 163 LTNAQVITWFQNRRAKLKRDLEEMKADVESAKKLGPSGQ--MDIVALAELEQNSEASGGG 220 Query: 9 GGG 1 GGG Sbjct: 221 GGG 223
>CR1EA_BACTX (Q57458) Pesticidal crystal protein cry1Ea (Insecticidal| delta-endotoxin CryIE(a)) (Crystaline entomocidal protoxin) (133 kDa crystal protein) Length = 1171 Score = 28.5 bits (62), Expect = 8.9 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = +2 Query: 188 GTLSMDKFPQIQFDLVFEKEFELSHNSKTTSVFFSGYN 301 G L +DK I D FE+E++L K + F+ N Sbjct: 588 GELYIDKIELILADATFEEEYDLERAQKAVNALFTSTN 625
>FKB39_DROME (P54397) 39 kDa FK506-binding nuclear protein (EC 5.2.1.8)| (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) Length = 357 Score = 28.5 bits (62), Expect = 8.9 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 1/90 (1%) Frame = +2 Query: 32 FWGLEVKPNQSIKVSPEDDHFLHLSQAALGEVKKDDKTTLFVKVDGGQKLAIGTLSMDKF 211 FWGL +KP + K S H+S AL K + L++ + Q+ + T++ Sbjct: 4 FWGLNMKPER--KYSQTIIKSFHISGVAL---DKGQEAKLYLAAE-KQEYIVATVT-KAI 56 Query: 212 PQIQFDLVFEK-EFELSHNSKTTSVFFSGY 298 PQ+ DL F K + + + + SV GY Sbjct: 57 PQVALDLNFSKGDRIMFYTAGDASVSLLGY 86
>LIFR_RAT (O70535) Leukemia inhibitory factor receptor precursor (LIF| receptor) (LIF-R) (CD118 antigen) Length = 1093 Score = 28.5 bits (62), Expect = 8.9 Identities = 13/44 (29%), Positives = 22/44 (50%) Frame = -2 Query: 195 RVPMASFWPPSTLTNKVVLSSFLTSPRAAWERWRKWSSSGETLM 64 R +FW S +N+ + +P + WR+WSS G+ L+ Sbjct: 506 RCSSETFWKWSKWSNEKRYLTTEATPSKGPDTWREWSSDGKNLI 549
>TILS_ANASP (Q8YYB8) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)| (tRNA(Ile)-lysidine synthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) Length = 342 Score = 28.5 bits (62), Expect = 8.9 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = +3 Query: 21 LPWSSGASRLSLTSPSRFLLKMTTSSISPRLPLVRSRRMTRQ 146 + W G LS +SPS LL++ + + PL RR+ RQ Sbjct: 246 MEWEVGEEFLSSSSPSSLLLRL-NRQVLQKAPLALQRRVMRQ 286
>GP108_RAT (Q6P6V6) Protein GPR108 precursor| Length = 577 Score = 28.5 bits (62), Expect = 8.9 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Frame = +2 Query: 74 SPEDDHFLHLSQAALGEVKKDDKTTLFVKVDGGQKLAIG-TLSMDKFPQIQ 223 +P+D+H +H S + VK+D +V G + L G S D PQ Q Sbjct: 162 TPKDNHVIHPSPKKMSAVKEDQAKLTVPQVSGDKALPAGHRHSSDGQPQSQ 212
>PTG3C_BACSU (P20166) PTS system glucose-specific EIICBA component (EIICBA-Glc)| (EII-Glc/EIII-Glc) [Includes: Glucose permease IIC component (PTS system glucose-specific EIIC component); Glucose-specific phosphotransferase enzyme IIB component (EC 2.7.1.6 Length = 699 Score = 28.5 bits (62), Expect = 8.9 Identities = 12/42 (28%), Positives = 22/42 (52%) Frame = +2 Query: 107 QAALGEVKKDDKTTLFVKVDGGQKLAIGTLSMDKFPQIQFDL 232 ++A GE+ + D+ ++ G +L GT K+P + F L Sbjct: 254 KSAAGEIIRGDQRIFMAQIKDGVQLTAGTFMTGKYPFMMFGL 295 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,520,671 Number of Sequences: 219361 Number of extensions: 1322580 Number of successful extensions: 4561 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 4311 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4534 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
