ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart56d06 |
|---|---|
| Clone Library Name | barley_pub |
>RL3_ASPFU (Q8NKF4) 60S ribosomal protein L3 (Allergen Asp f 23)| Length = 392 Score = 300 bits (767), Expect(2) = 7e-84 Identities = 145/176 (82%), Positives = 155/176 (88%) Frame = +3 Query: 24 MSHRKFEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGMTHVVRDL 203 MSHRK+EAPRHGSL FLPRKRAARHRGKVKSFPKDDPKKPVHLTA MGYKAGMT VVRDL Sbjct: 1 MSHRKYEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTASMGYKAGMTTVVRDL 60 Query: 204 DRPGSKMHKREVVEAVTIIETPPMVIVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 383 DRPG+KMHK+E+VEAVTIIETPP+V VGVVGY+ETPRGLRSLTTVWAEHLSDEVKRRFYK Sbjct: 61 DRPGAKMHKKEIVEAVTIIETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120 Query: 384 NWYRSXXXXXXXXXXXXXESSGQSIARELERIRKYCTVVRVLAHTQIRKTGLKQKE 551 NWY+S E +G SI RELERI+KYCTVVRVLAHTQIRKT LKQK+ Sbjct: 121 NWYKSKKKAFTKYAKKHAEENGASITRELERIKKYCTVVRVLAHTQIRKTPLKQKK 176 Score = 30.8 bits (68), Expect(2) = 7e-84 Identities = 13/14 (92%), Positives = 14/14 (100%) Frame = +1 Query: 544 KKKAHLMEIQVNGG 585 +KKAHLMEIQVNGG Sbjct: 174 QKKAHLMEIQVNGG 187
>RL3_NEUCR (P59671) 60S ribosomal protein L3| Length = 392 Score = 291 bits (744), Expect(2) = 4e-81 Identities = 138/176 (78%), Positives = 155/176 (88%) Frame = +3 Query: 24 MSHRKFEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGMTHVVRDL 203 MSHRK+EAPRHGSL +LPRKRAARHRGKVKSFPKDD KKPVHLTA MGYKAGMT +VRDL Sbjct: 1 MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDAKKPVHLTAAMGYKAGMTTIVRDL 60 Query: 204 DRPGSKMHKREVVEAVTIIETPPMVIVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 383 DRPG+K HK+EVVEAVTII+TPPM++VG+VGY+ETPRGLRSLTTVWAEHLSDEVKRRFYK Sbjct: 61 DRPGAKAHKKEVVEAVTIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120 Query: 384 NWYRSXXXXXXXXXXXXXESSGQSIARELERIRKYCTVVRVLAHTQIRKTGLKQKE 551 NWY+S +++G +I RELERI+KYCTVVRVLAHTQIRKT LKQK+ Sbjct: 121 NWYKSKKKAFTKYVKKHSDNNGAAITRELERIKKYCTVVRVLAHTQIRKTPLKQKK 176 Score = 30.4 bits (67), Expect(2) = 4e-81 Identities = 12/14 (85%), Positives = 14/14 (100%) Frame = +1 Query: 544 KKKAHLMEIQVNGG 585 +KKAHLMEIQ+NGG Sbjct: 174 QKKAHLMEIQINGG 187
>RL3B_SCHPO (P36584) 60S ribosomal protein L3-B| Length = 387 Score = 282 bits (721), Expect(2) = 2e-78 Identities = 138/175 (78%), Positives = 152/175 (86%) Frame = +3 Query: 27 SHRKFEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGMTHVVRDLD 206 SH KFE PRHGSLGFLPRKRA+R RGKVK+FPKDD KPVHLTA +GYKAGMTH+VRDLD Sbjct: 1 SHCKFEQPRHGSLGFLPRKRASRQRGKVKAFPKDDASKPVHLTAFLGYKAGMTHIVRDLD 60 Query: 207 RPGSKMHKREVVEAVTIIETPPMVIVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKN 386 RPGSKMHKRE++EAVTIIETPPMV+VGVVGYVETPRGLRSLTTVWAEHLS+EVKRRFYKN Sbjct: 61 RPGSKMHKREILEAVTIIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVKRRFYKN 120 Query: 387 WYRSXXXXXXXXXXXXXESSGQSIARELERIRKYCTVVRVLAHTQIRKTGLKQKE 551 W++S ES+ QSI RELERI+KYC+VVRVLAHTQIRKT L QK+ Sbjct: 121 WFKSKKKAFTKYAKKYAEST-QSINRELERIKKYCSVVRVLAHTQIRKTPLAQKK 174 Score = 30.8 bits (68), Expect(2) = 2e-78 Identities = 13/14 (92%), Positives = 14/14 (100%) Frame = +1 Query: 544 KKKAHLMEIQVNGG 585 +KKAHLMEIQVNGG Sbjct: 172 QKKAHLMEIQVNGG 185
>RL3A_SCHPO (P40372) 60S ribosomal protein L3-A| Length = 387 Score = 281 bits (720), Expect(2) = 2e-78 Identities = 137/175 (78%), Positives = 152/175 (86%) Frame = +3 Query: 27 SHRKFEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGMTHVVRDLD 206 SH KFE PRHGSLGFLPRKRA+R RGKVK+FPKDD KPVHLTA +GYKAGMTH+VRDLD Sbjct: 1 SHCKFEQPRHGSLGFLPRKRASRQRGKVKAFPKDDASKPVHLTAFLGYKAGMTHIVRDLD 60 Query: 207 RPGSKMHKREVVEAVTIIETPPMVIVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKN 386 RPGSKMHKRE++EAVT+IETPPMV+VGVVGYVETPRGLRSLTTVWAEHLS+EVKRRFYKN Sbjct: 61 RPGSKMHKREILEAVTVIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVKRRFYKN 120 Query: 387 WYRSXXXXXXXXXXXXXESSGQSIARELERIRKYCTVVRVLAHTQIRKTGLKQKE 551 W++S ES+ QSI RELERI+KYC+VVRVLAHTQIRKT L QK+ Sbjct: 121 WFKSKKKAFTKYAKKYAEST-QSINRELERIKKYCSVVRVLAHTQIRKTPLAQKK 174 Score = 30.8 bits (68), Expect(2) = 2e-78 Identities = 13/14 (92%), Positives = 14/14 (100%) Frame = +1 Query: 544 KKKAHLMEIQVNGG 585 +KKAHLMEIQVNGG Sbjct: 172 QKKAHLMEIQVNGG 185
>RL3_ASHGO (Q759R7) 60S ribosomal protein L3| Length = 388 Score = 263 bits (673), Expect(2) = 6e-72 Identities = 125/176 (71%), Positives = 145/176 (82%) Frame = +3 Query: 24 MSHRKFEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGMTHVVRDL 203 MSHRK+EAPRHG LGFLPRKRAA RG+VK+FPKDD KPV LT+ +GYKAGMT +VRDL Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASIRGRVKAFPKDDKSKPVALTSFLGYKAGMTTIVRDL 60 Query: 204 DRPGSKMHKREVVEAVTIIETPPMVIVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 383 DRPGSK HKRE+VEAV++++TPPMV+VGVVGY+ETPRGLRSLTTVWAEHLSDE+KRRFYK Sbjct: 61 DRPGSKFHKREIVEAVSVVDTPPMVVVGVVGYIETPRGLRSLTTVWAEHLSDEIKRRFYK 120 Query: 384 NWYRSXXXXXXXXXXXXXESSGQSIARELERIRKYCTVVRVLAHTQIRKTGLKQKE 551 NWY+S G +I REL RI+KY +VVRVLAHTQ+RKT L QK+ Sbjct: 121 NWYKSKKKAFTQVPPPSTAQDGAAIERELARIKKYASVVRVLAHTQVRKTPLVQKK 176 Score = 27.3 bits (59), Expect(2) = 6e-72 Identities = 11/14 (78%), Positives = 13/14 (92%) Frame = +1 Query: 544 KKKAHLMEIQVNGG 585 +KKAHL EIQ+NGG Sbjct: 174 QKKAHLAEIQLNGG 187
>RL3_CANGA (Q6FTJ2) 60S ribosomal protein L3| Length = 387 Score = 263 bits (673), Expect(2) = 6e-72 Identities = 128/176 (72%), Positives = 145/176 (82%) Frame = +3 Query: 24 MSHRKFEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGMTHVVRDL 203 MSHRK+EAPRHG LGFLPRKRAA RG+VKSFPKDD KPV LT+ +GYKAGMT +VRDL Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASVRGRVKSFPKDDKSKPVALTSFLGYKAGMTTIVRDL 60 Query: 204 DRPGSKMHKREVVEAVTIIETPPMVIVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 383 DRPGSK HKRE+VEAVT+++TPP+V+VGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK Sbjct: 61 DRPGSKFHKREIVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120 Query: 384 NWYRSXXXXXXXXXXXXXESSGQSIARELERIRKYCTVVRVLAHTQIRKTGLKQKE 551 NWY+S + +G I REL RI+KY TVVRVL HTQ+RKT L QK+ Sbjct: 121 NWYKSKKKAFTKYSAKYAQ-NGAEIERELARIKKYATVVRVLVHTQVRKTPLVQKK 175 Score = 27.3 bits (59), Expect(2) = 6e-72 Identities = 11/14 (78%), Positives = 13/14 (92%) Frame = +1 Query: 544 KKKAHLMEIQVNGG 585 +KKAHL EIQ+NGG Sbjct: 173 QKKAHLAEIQLNGG 186
>RL3_KLULA (Q6CJR7) 60S ribosomal protein L3| Length = 387 Score = 261 bits (668), Expect(2) = 2e-71 Identities = 127/176 (72%), Positives = 145/176 (82%) Frame = +3 Query: 24 MSHRKFEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGMTHVVRDL 203 MSHRK+EAPRHG LGFLPRKRAA RG+VKSFPKDD KPV LT+ +GYKAGM+ +VRDL Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASVRGRVKSFPKDDQTKPVALTSFLGYKAGMSTIVRDL 60 Query: 204 DRPGSKMHKREVVEAVTIIETPPMVIVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 383 DRPGSK HKREVVEAVT+++TPP+V+VGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK Sbjct: 61 DRPGSKFHKREVVEAVTVVDTPPIVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120 Query: 384 NWYRSXXXXXXXXXXXXXESSGQSIARELERIRKYCTVVRVLAHTQIRKTGLKQKE 551 NWY+S E +G + REL RI+KY +VVRVL HTQ+RKT L QK+ Sbjct: 121 NWYKSKKKAFTKYSAKYAE-NGAQVDRELARIKKYASVVRVLVHTQVRKTPLSQKK 175 Score = 27.3 bits (59), Expect(2) = 2e-71 Identities = 11/14 (78%), Positives = 13/14 (92%) Frame = +1 Query: 544 KKKAHLMEIQVNGG 585 +KKAHL EIQ+NGG Sbjct: 173 QKKAHLAEIQLNGG 186
>RL3_DEBHA (Q6BXM5) 60S ribosomal protein L3| Length = 389 Score = 259 bits (663), Expect(2) = 4e-71 Identities = 126/176 (71%), Positives = 145/176 (82%) Frame = +3 Query: 24 MSHRKFEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGMTHVVRDL 203 MSHRK+EAPRHGSLGFLPRKR+A RG+VKSFPKD KPV LTA +GYKAGMT VVRDL Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRSANIRGRVKSFPKDVKSKPVALTAFLGYKAGMTTVVRDL 60 Query: 204 DRPGSKMHKREVVEAVTIIETPPMVIVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 383 DRPGSKMHKRE+VEA T+++TPP+V+VGVVGYVETPRGLRSLTTVWAEHLS+EV+RRFYK Sbjct: 61 DRPGSKMHKREIVEAATVVDTPPLVVVGVVGYVETPRGLRSLTTVWAEHLSEEVRRRFYK 120 Query: 384 NWYRSXXXXXXXXXXXXXESSGQSIARELERIRKYCTVVRVLAHTQIRKTGLKQKE 551 NWY+S + G + REL RI+KY +VVRVLAHTQI+KT L QK+ Sbjct: 121 NWYKSKKKAFTKYSAKYAQ-DGAQVERELARIKKYASVVRVLAHTQIKKTPLAQKK 175 Score = 28.5 bits (62), Expect(2) = 4e-71 Identities = 12/14 (85%), Positives = 13/14 (92%) Frame = +1 Query: 544 KKKAHLMEIQVNGG 585 +KKAHL EIQVNGG Sbjct: 173 QKKAHLAEIQVNGG 186
>RL3_YEAST (P14126) 60S ribosomal protein L3 (YL1) (RP1) (Maintenance of| killer protein 8) (Trichodermin resistance protein) Length = 386 Score = 257 bits (656), Expect(2) = 5e-70 Identities = 126/175 (72%), Positives = 142/175 (81%) Frame = +3 Query: 27 SHRKFEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGMTHVVRDLD 206 SHRK+EAPRHG LGFLPRKRAA R +VK+FPKDD KPV LT+ +GYKAGMT +VRDLD Sbjct: 1 SHRKYEAPRHGHLGFLPRKRAASIRARVKAFPKDDRSKPVALTSFLGYKAGMTTIVRDLD 60 Query: 207 RPGSKMHKREVVEAVTIIETPPMVIVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKN 386 RPGSK HKREVVEAVT+++TPP+V+VGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKN Sbjct: 61 RPGSKFHKREVVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKN 120 Query: 387 WYRSXXXXXXXXXXXXXESSGQSIARELERIRKYCTVVRVLAHTQIRKTGLKQKE 551 WY+S + G I REL RI+KY +VVRVL HTQIRKT L QK+ Sbjct: 121 WYKSKKKAFTKYSAKYAQ-DGAGIERELARIKKYASVVRVLVHTQIRKTPLAQKK 174 Score = 27.3 bits (59), Expect(2) = 5e-70 Identities = 11/14 (78%), Positives = 13/14 (92%) Frame = +1 Query: 544 KKKAHLMEIQVNGG 585 +KKAHL EIQ+NGG Sbjct: 172 QKKAHLAEIQLNGG 185
>RL3_RAT (P21531) 60S ribosomal protein L3 (L4)| Length = 402 Score = 251 bits (642), Expect(2) = 2e-69 Identities = 115/176 (65%), Positives = 146/176 (82%), Gaps = 1/176 (0%) Frame = +3 Query: 27 SHRKFEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGMTHVVRDLD 206 SHRKF APRHGSLGFLPRKR++RHRGKVKSFPKDDP KPVHLTA +GYKAGMTH+VR++D Sbjct: 1 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVD 60 Query: 207 RPGSKMHKREVVEAVTIIETPPMVIVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKN 386 RPGSK++K+EVVEAVTI+ETPPMV+VG+VGYVETPRGLR+ TV+AEH+SDE KRRFYKN Sbjct: 61 RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKN 120 Query: 387 WYRSXXXXXXXXXXXXXESSG-QSIARELERIRKYCTVVRVLAHTQIRKTGLKQKE 551 W++S + +G + + ++ ++KYC V+R++AHTQ+R L+QK+ Sbjct: 121 WHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLPLRQKK 176 Score = 30.8 bits (68), Expect(2) = 2e-69 Identities = 13/14 (92%), Positives = 14/14 (100%) Frame = +1 Query: 544 KKKAHLMEIQVNGG 585 +KKAHLMEIQVNGG Sbjct: 174 QKKAHLMEIQVNGG 187
>RL3_HUMAN (P39023) 60S ribosomal protein L3 (HIV-1 TAR RNA-binding protein B)| (TARBP-B) Length = 402 Score = 251 bits (642), Expect(2) = 2e-69 Identities = 116/176 (65%), Positives = 145/176 (82%), Gaps = 1/176 (0%) Frame = +3 Query: 27 SHRKFEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGMTHVVRDLD 206 SHRKF APRHGSLGFLPRKR++RHRGKVKSFPKDDP KPVHLTA +GYKAGMTH+VR++D Sbjct: 1 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVD 60 Query: 207 RPGSKMHKREVVEAVTIIETPPMVIVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKN 386 RPGSK++K+EVVEAVTI+ETPPMV+VG+VGYVETPRGLR+ TV+AEH+SDE KRRFYKN Sbjct: 61 RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKN 120 Query: 387 WYRSXXXXXXXXXXXXXESSG-QSIARELERIRKYCTVVRVLAHTQIRKTGLKQKE 551 W++S + G + + ++ ++KYC V+RV+AHTQ+R L+QK+ Sbjct: 121 WHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKK 176 Score = 30.8 bits (68), Expect(2) = 2e-69 Identities = 13/14 (92%), Positives = 14/14 (100%) Frame = +1 Query: 544 KKKAHLMEIQVNGG 585 +KKAHLMEIQVNGG Sbjct: 174 QKKAHLMEIQVNGG 187
>RL3B_ARATH (P22738) 60S ribosomal protein L3| Length = 389 Score = 254 bits (649), Expect(2) = 3e-69 Identities = 121/177 (68%), Positives = 146/177 (82%), Gaps = 2/177 (1%) Frame = +3 Query: 27 SHRKFEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGMTHVVRDLD 206 SHRKFE PRHGSLGFLPRKRA+RHRGKVK+FPKDDP KP LT+ +GYKAGMTH+VRD++ Sbjct: 1 SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTSFLGYKAGMTHIVRDVE 60 Query: 207 RPGSKMHKREVVEAVTIIETPPMVIVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKN 386 +PGSK+HK+E EAVTIIETPPMV+VGVVGYV+TPRGLRSL TVWA+HLS+E++RRFYKN Sbjct: 61 KPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLCTVWAQHLSEELRRRFYKN 120 Query: 387 WYRSXXXXXXXXXXXXXESSG-QSIARELERIRKYCTVVRVLAHTQIRK-TGLKQKE 551 W +S G + I +LE+++KYC+V+RVLAHTQIRK GLKQK+ Sbjct: 121 WAKSKKKAFTRYSKKHETEEGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGLKQKK 177 Score = 27.7 bits (60), Expect(2) = 3e-69 Identities = 11/14 (78%), Positives = 13/14 (92%) Frame = +1 Query: 544 KKKAHLMEIQVNGG 585 +KKAHL EIQ+NGG Sbjct: 175 QKKAHLNEIQINGG 188
>RL3_BOVIN (P39872) 60S ribosomal protein L3| Length = 402 Score = 250 bits (638), Expect(2) = 7e-69 Identities = 116/176 (65%), Positives = 145/176 (82%), Gaps = 1/176 (0%) Frame = +3 Query: 27 SHRKFEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGMTHVVRDLD 206 SHRKF APRHGSLGFLPRKR++RHRGKVKSFPKDD KPVHLTA +GYKAGMTH+VR++D Sbjct: 1 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREVD 60 Query: 207 RPGSKMHKREVVEAVTIIETPPMVIVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKN 386 RPGSK++K+EVVEAVTI+ETPPMVIVG+VGYVETPRGLR+ T++AEH+SDE KRRFYKN Sbjct: 61 RPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYKN 120 Query: 387 WYRSXXXXXXXXXXXXXESSG-QSIARELERIRKYCTVVRVLAHTQIRKTGLKQKE 551 W++S ++ G + + R+ ++KYC V+RV+AHTQ+R L+QK+ Sbjct: 121 WHKSKKKAFTKYCKKWQDADGKKQLERDFSSMKKYCQVIRVIAHTQMRLLPLRQKK 176 Score = 30.4 bits (67), Expect(2) = 7e-69 Identities = 12/14 (85%), Positives = 14/14 (100%) Frame = +1 Query: 544 KKKAHLMEIQVNGG 585 +KKAHLME+QVNGG Sbjct: 174 QKKAHLMEVQVNGG 187
>RL3_MACFA (Q4R5Q0) 60S ribosomal protein L3| Length = 402 Score = 249 bits (635), Expect(2) = 1e-68 Identities = 115/176 (65%), Positives = 144/176 (81%), Gaps = 1/176 (0%) Frame = +3 Query: 27 SHRKFEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGMTHVVRDLD 206 SHRKF APRHGSLGFLPRKR++RHRGKVKSFPKDDP KPVHLTA +GYKAGMTH+VR++D Sbjct: 1 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVD 60 Query: 207 RPGSKMHKREVVEAVTIIETPPMVIVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKN 386 RPGSK++K+EVV AVTI+ETPPMV+VG+VGYVETPRGLR+ TV+AEH+SDE KRRFYKN Sbjct: 61 RPGSKVNKKEVVVAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKN 120 Query: 387 WYRSXXXXXXXXXXXXXESSG-QSIARELERIRKYCTVVRVLAHTQIRKTGLKQKE 551 W++S + G + + ++ ++KYC V+RV+AHTQ+R L+QK+ Sbjct: 121 WHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKK 176 Score = 30.8 bits (68), Expect(2) = 1e-68 Identities = 13/14 (92%), Positives = 14/14 (100%) Frame = +1 Query: 544 KKKAHLMEIQVNGG 585 +KKAHLMEIQVNGG Sbjct: 174 QKKAHLMEIQVNGG 187
>RL3_MOUSE (P27659) 60S ribosomal protein L3 (J1 protein)| Length = 402 Score = 248 bits (634), Expect(2) = 2e-68 Identities = 114/176 (64%), Positives = 145/176 (82%), Gaps = 1/176 (0%) Frame = +3 Query: 27 SHRKFEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGMTHVVRDLD 206 SHRKF APRHGSLGFLPRKR++RHRGKVKSFPKDD KPVHLTA +GYKAGMTH+VR++D Sbjct: 1 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREVD 60 Query: 207 RPGSKMHKREVVEAVTIIETPPMVIVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKN 386 RPGSK++K+EVVEAVTI+ETPPMV+VG+VGYVETPRGLR+ TV+AEH+SDE KRRFYKN Sbjct: 61 RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKN 120 Query: 387 WYRSXXXXXXXXXXXXXESSG-QSIARELERIRKYCTVVRVLAHTQIRKTGLKQKE 551 W++S + +G + + ++ ++KYC V+R++AHTQ+R L+QK+ Sbjct: 121 WHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLPLRQKK 176 Score = 30.8 bits (68), Expect(2) = 2e-68 Identities = 13/14 (92%), Positives = 14/14 (100%) Frame = +1 Query: 544 KKKAHLMEIQVNGG 585 +KKAHLMEIQVNGG Sbjct: 174 QKKAHLMEIQVNGG 187
>RL3_ORYSA (P35684) 60S ribosomal protein L3| Length = 388 Score = 244 bits (624), Expect(2) = 3e-67 Identities = 116/177 (65%), Positives = 145/177 (81%), Gaps = 2/177 (1%) Frame = +3 Query: 27 SHRKFEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGMTHVVRDLD 206 SHRKFE PRHGSLGFLPRKR++RHRGKVKSFPKDD KP HLT+ +GYKAGMTH+VR+++ Sbjct: 1 SHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVSKPCHLTSFVGYKAGMTHIVREVE 60 Query: 207 RPGSKMHKREVVEAVTIIETPPMVIVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKN 386 +PGSK+HK+E EAVTIIETPP+VIVG+V YV+TPRGLRSL +VWA+HLS+EV+RRFYKN Sbjct: 61 KPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYKN 120 Query: 387 WYRSXXXXXXXXXXXXXESSG-QSIARELERIRKYCTVVRVLAHTQIRK-TGLKQKE 551 W +S +G + I +LE+++KY ++VRV+AHTQIRK GLKQK+ Sbjct: 121 WCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASIVRVIAHTQIRKMKGLKQKK 177 Score = 30.4 bits (67), Expect(2) = 3e-67 Identities = 12/14 (85%), Positives = 14/14 (100%) Frame = +1 Query: 544 KKKAHLMEIQVNGG 585 +KKAHLMEIQ+NGG Sbjct: 175 QKKAHLMEIQINGG 188
>RL3A_ARATH (P17094) 60S ribosomal protein L3| Length = 388 Score = 243 bits (621), Expect(2) = 1e-66 Identities = 119/177 (67%), Positives = 140/177 (79%), Gaps = 2/177 (1%) Frame = +3 Query: 27 SHRKFEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGMTHVVRDLD 206 SHRKFE PRHGSLGFLPRKRA RHRGKVK+FPKDD KP TA MGYKAGMTH+VR+++ Sbjct: 1 SHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREVE 60 Query: 207 RPGSKMHKREVVEAVTIIETPPMVIVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKN 386 +PGSK+HK+E EAVTIIETP MV+VGVV YV+TPRGLRSL TVWA+HLS+EV+RRFYKN Sbjct: 61 KPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYKN 120 Query: 387 WYRSXXXXXXXXXXXXXESSG-QSIARELERIRKYCTVVRVLAHTQIRK-TGLKQKE 551 W +S G + I +LE+++KY TV+RVLAHTQIRK GLKQK+ Sbjct: 121 WAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKK 177 Score = 29.6 bits (65), Expect(2) = 1e-66 Identities = 11/14 (78%), Positives = 14/14 (100%) Frame = +1 Query: 544 KKKAHLMEIQVNGG 585 +KKAH+MEIQ+NGG Sbjct: 175 QKKAHMMEIQINGG 188
>RL3_DICDI (P34113) 60S ribosomal protein L3| Length = 397 Score = 238 bits (608), Expect(2) = 8e-65 Identities = 116/177 (65%), Positives = 137/177 (77%), Gaps = 2/177 (1%) Frame = +3 Query: 27 SHRKFEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGMTHVVRDLD 206 SHRKFEAPRHG+LGF PRKRAARH+GKVKSFPKDD + VHLTA MGYKAGMTHVVRDL+ Sbjct: 1 SHRKFEAPRHGNLGFRPRKRAARHQGKVKSFPKDDRTQKVHLTAFMGYKAGMTHVVRDLE 60 Query: 207 RPGSKMHKREVVEAVTIIETPPMVIVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKN 386 +PGSKMHK+E+VEAVTIIE PPM IVG+VGYVET +GL++ TVWA+HLSD +RR YKN Sbjct: 61 KPGSKMHKKEIVEAVTIIECPPMYIVGLVGYVETAQGLKTYKTVWAQHLSDNFRRRLYKN 120 Query: 387 WYRSXX--XXXXXXXXXXXESSGQSIARELERIRKYCTVVRVLAHTQIRKTGLKQKE 551 WY+S E +SI L+ I+K C+VVRV+AHTQ+ K L QK+ Sbjct: 121 WYKSKSKKAFTKYVKQYETEEGKKSIEASLQAIKKRCSVVRVIAHTQVHKLKLTQKK 177 Score = 28.5 bits (62), Expect(2) = 8e-65 Identities = 11/14 (78%), Positives = 14/14 (100%) Frame = +1 Query: 544 KKKAHLMEIQVNGG 585 +KKAH++EIQVNGG Sbjct: 175 QKKAHVLEIQVNGG 188
>RL3_DROME (O16797) 60S ribosomal protein L3| Length = 415 Score = 234 bits (598), Expect(2) = 1e-63 Identities = 106/176 (60%), Positives = 137/176 (77%), Gaps = 1/176 (0%) Frame = +3 Query: 27 SHRKFEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGMTHVVRDLD 206 SHRKF APRHGS+ F P+KR+ARHRGKVK+FPKDD KPVHLT +GYKAGMTH+VR+ D Sbjct: 1 SHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREAD 60 Query: 207 RPGSKMHKREVVEAVTIIETPPMVIVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKN 386 RPGSK++K+EVVEAVT++ETPPM++VG VGY+ETP GLR+L VWA+HLS+E +RRFYKN Sbjct: 61 RPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 120 Query: 387 WYRSXXXXXXXXXXXXXESSG-QSIARELERIRKYCTVVRVLAHTQIRKTGLKQKE 551 WY+S + G +SI + ++ +YC V+RV+AH+QIR +QK+ Sbjct: 121 WYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKK 176 Score = 28.5 bits (62), Expect(2) = 1e-63 Identities = 11/14 (78%), Positives = 14/14 (100%) Frame = +1 Query: 544 KKKAHLMEIQVNGG 585 +KKAH+MEIQ+NGG Sbjct: 174 QKKAHVMEIQLNGG 187
>RL3_CAEEL (P50880) 60S ribosomal protein L3| Length = 401 Score = 227 bits (579), Expect(2) = 1e-61 Identities = 101/177 (57%), Positives = 137/177 (77%), Gaps = 1/177 (0%) Frame = +3 Query: 24 MSHRKFEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGMTHVVRDL 203 MSHRKF APRHG +GF P+KR+ +RG++K+FPKDD KP+HLTA +GYKAGMTH+VRD+ Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60 Query: 204 DRPGSKMHKREVVEAVTIIETPPMVIVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 383 D+PGSK++K+EVVEAVTI+ETPPMVI GV GYV+TP+G R+LTT+WAEHLS+E +RRFY Sbjct: 61 DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYS 120 Query: 384 NWYRSXXXXXXXXXXXXXESSGQS-IARELERIRKYCTVVRVLAHTQIRKTGLKQKE 551 NW +S + G+ I + +++KYC+ +RV+AHTQ++ +QK+ Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKK 177 Score = 29.3 bits (64), Expect(2) = 1e-61 Identities = 12/14 (85%), Positives = 14/14 (100%) Frame = +1 Query: 544 KKKAHLMEIQVNGG 585 +KKAHL+EIQVNGG Sbjct: 175 QKKAHLVEIQVNGG 188
>RL3_TOXCA (P49149) 60S ribosomal protein L3| Length = 401 Score = 227 bits (578), Expect(2) = 1e-61 Identities = 102/176 (57%), Positives = 137/176 (77%), Gaps = 1/176 (0%) Frame = +3 Query: 27 SHRKFEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGMTHVVRDLD 206 SHRKF APRHGS+GF P+KR+ RHRGKVK+FPKDDP KP+HLTA + +KAGMTH+VR++D Sbjct: 1 SHRKFSAPRHGSMGFTPKKRSKRHRGKVKAFPKDDPTKPIHLTAFIAFKAGMTHIVREVD 60 Query: 207 RPGSKMHKREVVEAVTIIETPPMVIVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKN 386 +PGSK++K+EVVEAVTI E PPMVIVG+VGY++TPRG R TVWAEHLS++ + RFYKN Sbjct: 61 KPGSKVNKKEVVEAVTIFEAPPMVIVGIVGYIDTPRGPRQFKTVWAEHLSEDCRGRFYKN 120 Query: 387 WYRSXXXXXXXXXXXXXESSG-QSIARELERIRKYCTVVRVLAHTQIRKTGLKQKE 551 W+ S + G +SI +L +++KYC+ +RV+AHTQ++ ++K+ Sbjct: 121 WHTSKKKAFQKHAKKWQDEDGRKSIEADLNKMKKYCSKIRVIAHTQMKVMKHREKK 176 Score = 29.6 bits (65), Expect(2) = 1e-61 Identities = 11/14 (78%), Positives = 14/14 (100%) Frame = +1 Query: 544 KKKAHLMEIQVNGG 585 +KKAH+MEIQ+NGG Sbjct: 174 EKKAHIMEIQINGG 187
>RL3_CAEBR (Q9NBK4) 60S ribosomal protein L3| Length = 401 Score = 226 bits (575), Expect(2) = 4e-61 Identities = 100/177 (56%), Positives = 137/177 (77%), Gaps = 1/177 (0%) Frame = +3 Query: 24 MSHRKFEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGMTHVVRDL 203 MSHRKF APRHG +GF P+KR+ +RG++K+FPKDD KP+HLTA +GYKAGMTH+VRD+ Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDASKPIHLTAFLGYKAGMTHIVRDV 60 Query: 204 DRPGSKMHKREVVEAVTIIETPPMVIVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 383 D+PGSK++K+EVVEAV+IIETPPMVI GV GY++TP+G R+LTT+WAEHLS+E +RRFY Sbjct: 61 DKPGSKVNKKEVVEAVSIIETPPMVIAGVTGYIDTPQGPRALTTIWAEHLSEEARRRFYS 120 Query: 384 NWYRSXXXXXXXXXXXXXESSGQS-IARELERIRKYCTVVRVLAHTQIRKTGLKQKE 551 NW +S + G+ I + +++KYC+ +RV+AHTQ++ +QK+ Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKK 177 Score = 28.9 bits (63), Expect(2) = 4e-61 Identities = 11/14 (78%), Positives = 14/14 (100%) Frame = +1 Query: 544 KKKAHLMEIQVNGG 585 +KKAHL+EIQ+NGG Sbjct: 175 QKKAHLVEIQINGG 188
>RL3L_HUMAN (Q92901) 60S ribosomal protein L3-like| Length = 406 Score = 223 bits (568), Expect(2) = 2e-60 Identities = 102/176 (57%), Positives = 135/176 (76%), Gaps = 1/176 (0%) Frame = +3 Query: 27 SHRKFEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGMTHVVRDLD 206 SHRKF APRHG LGFLP KR+ RHRGKVK++P+DDP +PVHLTA +GYKAGMTH +R++ Sbjct: 1 SHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREVH 60 Query: 207 RPGSKMHKREVVEAVTIIETPPMVIVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKN 386 RPG K+ KRE VEAVTI+ETPP+V+VGVVGYV TPRGLRS T++AEHLSDE +RRFYK+ Sbjct: 61 RPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYKD 120 Query: 387 WYRSXXXXXXXXXXXXXESSG-QSIARELERIRKYCTVVRVLAHTQIRKTGLKQKE 551 W++S ++ G + + ++ ++KYC V+RV+ HTQ++ +QK+ Sbjct: 121 WHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKK 176 Score = 28.9 bits (63), Expect(2) = 2e-60 Identities = 11/14 (78%), Positives = 14/14 (100%) Frame = +1 Query: 544 KKKAHLMEIQVNGG 585 +KKAH+MEIQ+NGG Sbjct: 174 QKKAHIMEIQLNGG 187
>RL3L_BOVIN (Q3SZ10) 60S ribosomal protein L3-like| Length = 406 Score = 223 bits (568), Expect(2) = 3e-60 Identities = 102/176 (57%), Positives = 135/176 (76%), Gaps = 1/176 (0%) Frame = +3 Query: 27 SHRKFEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGMTHVVRDLD 206 SHRKF APRHG LGFLP KR+ RHRGKVK++P+DDP +PVHLTA +GYKAGMTH +R++ Sbjct: 1 SHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREVH 60 Query: 207 RPGSKMHKREVVEAVTIIETPPMVIVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKN 386 RPG K+ KRE VEAVTI+ETPP+V+VGVVGYV TPRGLRS T++AEHLSDE +RRFYK+ Sbjct: 61 RPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYKD 120 Query: 387 WYRSXXXXXXXXXXXXXESSG-QSIARELERIRKYCTVVRVLAHTQIRKTGLKQKE 551 W++S ++ G + + ++ ++KYC V+RV+ HTQ++ +QK+ Sbjct: 121 WHKSKKKAFTKACKRWRDADGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKK 176 Score = 28.5 bits (62), Expect(2) = 3e-60 Identities = 10/14 (71%), Positives = 14/14 (100%) Frame = +1 Query: 544 KKKAHLMEIQVNGG 585 +KKAH+ME+Q+NGG Sbjct: 174 QKKAHIMEVQLNGG 187
>RL3_ENCCU (Q8SQI3) 60S ribosomal protein L3| Length = 383 Score = 137 bits (344), Expect(2) = 4e-34 Identities = 82/178 (46%), Positives = 103/178 (57%), Gaps = 4/178 (2%) Frame = +3 Query: 24 MSHRKFEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGMTHVVRDL 203 MS RKF APRHGSL F PRKR+ R +FP DD +PVHLT M YKAGMTHVVR Sbjct: 1 MSCRKFNAPRHGSLQFCPRKRSKTIRPAAGAFPADDRSQPVHLTGFMAYKAGMTHVVRTK 60 Query: 204 DRPG-SKMHKREVVEAVTIIETPPMVIVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFY 380 + +K RE+++AVT++E PPMV+ G+VGY +T GLR L V A ++SD V RR + Sbjct: 61 TQVAKNKQLSREIMDAVTVLEAPPMVVYGIVGYEKTVTGLRRLPIVTAAYVSDGVLRRMF 120 Query: 381 KNWYRSXXXXXXXXXXXXXESSGQSIARELERIRKYCTVVRVLAHTQ---IRKTGLKQ 545 N Y S ES +E I++ VRVL TQ I+ GLK+ Sbjct: 121 GNRYASKESAGQFCKGSVCES-------RVEMIKERAHCVRVLVQTQPTLIKGLGLKK 171 Score = 27.3 bits (59), Expect(2) = 4e-34 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = +1 Query: 547 KKAHLMEIQVNGG 585 KKAH+ EIQVNGG Sbjct: 170 KKAHIAEIQVNGG 182
>RL3_AERPE (Q9YFM2) 50S ribosomal protein L3P| Length = 344 Score = 95.1 bits (235), Expect = 1e-19 Identities = 59/119 (49%), Positives = 73/119 (61%), Gaps = 2/119 (1%) Frame = +3 Query: 24 MSHRKFEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGMTHVVRDL 203 M RK APR GSLGF PRKRA+R +VK +P+ D KPV L A +GY+AGMTHV Sbjct: 1 MGARKKRAPRRGSLGFSPRKRASRLVPRVKRWPEVDIGKPVPL-AFLGYRAGMTHVFMVD 59 Query: 204 DRPGSKMHKREVVEAVTIIETPPMVIVGVVGYVETP-RGLRSLTTVWAEHLSD-EVKRR 374 DRPG +E+ VTI+ETPPM + V Y P RG SL WA+ + E++RR Sbjct: 60 DRPGRPTSGKEIFVPVTIVETPPMFVAAVRLYGYDPNRGRYSLGEAWAQPPPELELQRR 118
>RL3_HALMA (P20279) 50S ribosomal protein L3P (Hmal3) (Hl1)| Length = 337 Score = 90.5 bits (223), Expect = 3e-18 Identities = 50/108 (46%), Positives = 59/108 (54%) Frame = +3 Query: 48 PRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGMTHVVRDLDRPGSKMH 227 PR GSLGF PRKR+ + S+P DD + V GYKAGMTHVV D P S Sbjct: 6 PRKGSLGFGPRKRSTSETPRFNSWPSDDGQPGVQ--GFAGYKAGMTHVVLVNDEPNSPRE 63 Query: 228 KREVVEAVTIIETPPMVIVGVVGYVETPRGLRSLTTVWAEHLSDEVKR 371 E VT+IETPPM V + Y +TP G R LT VW + E+ R Sbjct: 64 GMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDR 111
>RL3_METVA (Q9UWG2) 50S ribosomal protein L3P| Length = 334 Score = 89.7 bits (221), Expect = 5e-18 Identities = 55/172 (31%), Positives = 85/172 (49%) Frame = +3 Query: 36 KFEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGMTHVVRDLDRPG 215 K PR GSL F PRKRA + K++S+P D K V L A YKAG TH + + P Sbjct: 4 KKNRPRRGSLAFSPRKRAKKLVPKIRSWPAD---KKVGLQAFPVYKAGTTHALLVENNPK 60 Query: 216 SKMHKREVVEAVTIIETPPMVIVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKNWYR 395 S + +EV VT++ETP + + G+ Y +T +GL++LT VWA+ E+ R+ Sbjct: 61 SPNNGQEVFSPVTVLETPEITVAGIRAYGKTTKGLKALTEVWAKQQDKELGRKL------ 114 Query: 396 SXXXXXXXXXXXXXESSGQSIARELERIRKYCTVVRVLAHTQIRKTGLKQKE 551 + L+ + + +RV+ HT + TG+ +K+ Sbjct: 115 -----------TVTKKEEIKTVESLDAVLEKTVDLRVIVHTNPKTTGIPKKK 155
>RL3_ARCFU (O28354) 50S ribosomal protein L3P| Length = 331 Score = 89.4 bits (220), Expect = 7e-18 Identities = 49/113 (43%), Positives = 66/113 (58%) Frame = +3 Query: 36 KFEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGMTHVVRDLDRPG 215 K+ PR GSL F PRKRA +++++P+ D V + GYKAGMTHVV DR Sbjct: 2 KYHRPRRGSLAFSPRKRAKSIVPRIRAWPECDR---VRMQGFAGYKAGMTHVVMIDDRKN 58 Query: 216 SKMHKREVVEAVTIIETPPMVIVGVVGYVETPRGLRSLTTVWAEHLSDEVKRR 374 S + EVV VT+IETPPM + V Y +T G++ VW+ +L D + RR Sbjct: 59 SPTYGEEVVVPVTVIETPPMKVAAVRVYKKTQYGMQIAAEVWSNNLDDFLDRR 111
>RL3_METTH (O26110) 50S ribosomal protein L3P| Length = 337 Score = 89.4 bits (220), Expect = 7e-18 Identities = 62/172 (36%), Positives = 90/172 (52%), Gaps = 4/172 (2%) Frame = +3 Query: 48 PRHGSLGFLPRKRAARHRGKVKSFPK-DDPKKPVHLTAMMGYKAGMTHVVRDLDRPGSKM 224 PR GS+ F PRKRAAR +VKS+P+ D+P L A+ GYKAGMTHV+ ++ S Sbjct: 7 PRKGSVAFSPRKRAARETPRVKSWPQVDEPG----LLALAGYKAGMTHVMMVDNQKNSPT 62 Query: 225 HKREVVEAVTIIETPPMVIVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKNWYRSXX 404 EV VTI+E PP+ ++ V Y +T RGL++L V A D+++R+ Sbjct: 63 EGMEVSTPVTILEVPPLTVMAVRTYEKTSRGLKTLGEVLATETKDDLRRKL--------- 113 Query: 405 XXXXXXXXXXXESSGQSIARELERIR---KYCTVVRVLAHTQIRKTGLKQKE 551 + Q A +E+IR +Y VRV+ HT R + +K+ Sbjct: 114 -------TPPADDYDQEAA--IEKIRSNMEYVADVRVIVHTNPRLASVPKKK 156
>RL3_PYRKO (Q5JDJ0) 50S ribosomal protein L3P| Length = 346 Score = 85.5 bits (210), Expect = 1e-16 Identities = 62/176 (35%), Positives = 85/176 (48%), Gaps = 5/176 (2%) Frame = +3 Query: 36 KFEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGMTHVVRDLDRPG 215 K PR GSL + PRKRA +++S+PKD V + GYKAGMTH++ D PG Sbjct: 3 KIHRPRRGSLAYSPRKRAKSIVPRIRSWPKDSE---VRMLGFAGYKAGMTHILMIDDSPG 59 Query: 216 SKMHKREVVEAVTIIETPPMVIVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFY---KN 386 K E+ VTI+E PP+ + G+ Y + GL + T VW L V RR KN Sbjct: 60 LTKGK-EIFVPVTIVEVPPLFVYGIRAYKQGYLGLETATEVWFHDLHKNVARRIKTLPKN 118 Query: 387 WYRSXXXXXXXXXXXXXESSGQSIARELERIRKYCTV--VRVLAHTQIRKTGLKQK 548 + E + Q+ +LE + + VR+L HTQ GLK+K Sbjct: 119 Y---------------NEEAFQAKLGQLEDLVNDGEIADVRLLVHTQPWLIGLKKK 159
>RL3_HALSA (Q9HPD4) 50S ribosomal protein L3P| Length = 334 Score = 84.7 bits (208), Expect = 2e-16 Identities = 47/108 (43%), Positives = 60/108 (55%) Frame = +3 Query: 48 PRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGMTHVVRDLDRPGSKMH 227 PR GS+GF PRKRA + S+P DD + V L GYKAGMTHVV D+ + Sbjct: 6 PRKGSMGFSPRKRAESEVPRFNSWPADDGE--VGLQGFAGYKAGMTHVVLVDDKANAPTE 63 Query: 228 KREVVEAVTIIETPPMVIVGVVGYVETPRGLRSLTTVWAEHLSDEVKR 371 E VT++ETPPM V Y +TP G + LT VWA+ + + R Sbjct: 64 GMETTVPVTVVETPPMRAAAVRLYEDTPYGKKPLTEVWADDTHESLDR 111
>RL3_METKA (Q8TY90) 50S ribosomal protein L3P| Length = 361 Score = 84.0 bits (206), Expect = 3e-16 Identities = 42/100 (42%), Positives = 57/100 (57%) Frame = +3 Query: 48 PRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGMTHVVRDLDRPGSKMH 227 PR GSL F PRKRA+R +++S+P ++ V + GYKAGMTH + D P S Sbjct: 12 PRRGSLAFSPRKRASRPVPRIRSWPDEER---VRVQGFAGYKAGMTHAIMIDDWPNSPTE 68 Query: 228 KREVVEAVTIIETPPMVIVGVVGYVETPRGLRSLTTVWAE 347 E+ VTI++ PPM + + Y TP G R +T WAE Sbjct: 69 GEEISVPVTILDAPPMYVAAIRAYAPTPDGYRCVTEAWAE 108
>RL3_METJA (P54014) 50S ribosomal protein L3P| Length = 335 Score = 83.6 bits (205), Expect = 4e-16 Identities = 56/169 (33%), Positives = 83/169 (49%), Gaps = 1/169 (0%) Frame = +3 Query: 48 PRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGMTHVVRDLDRPGSKMH 227 PR GSL F PRKRA R +++S+P++D V L A YKAGM+H D P S Sbjct: 8 PRRGSLAFSPRKRAKRPVPRIRSWPEEDT---VRLQAFPVYKAGMSHAFIKEDNPKSPNA 64 Query: 228 KREVVEAVTIIETPPMVIVGVVGYVETPRG-LRSLTTVWAEHLSDEVKRRFYKNWYRSXX 404 +EV +TI+E PP+ + + Y R L +LT VWA++L E++R+ Sbjct: 65 GQEVFTPITILEAPPINVCAIRVYGRNERNYLTTLTEVWADNLDKELERKI--------- 115 Query: 405 XXXXXXXXXXXESSGQSIARELERIRKYCTVVRVLAHTQIRKTGLKQKE 551 + + +LE ++ VRVL HT + T L +K+ Sbjct: 116 --------KLPKKEDRKTVEDLEALKDKIEDVRVLVHTNPKLTCLPKKK 156
>RL3_SULTO (Q975I1) 50S ribosomal protein L3P| Length = 343 Score = 79.0 bits (193), Expect = 1e-14 Identities = 43/116 (37%), Positives = 65/116 (56%), Gaps = 1/116 (0%) Frame = +3 Query: 24 MSHRKFEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGMTHVVRDL 203 M HRK +PR GS G PRKRA+ +S+P +P L +GYK GM+H+ Sbjct: 1 MGHRKLASPRRGSAGVRPRKRASEILPTPRSWPTIQSNEP-KLLGFVGYKVGMSHIFMID 59 Query: 204 DRPGSKMHKREVVEAVTIIETPPMVIVGVVGYVETPRG-LRSLTTVWAEHLSDEVK 368 D+P S + +E+ V++IETPP++ + + YV P+G +LT W + D +K Sbjct: 60 DKPTSPNYGKEIYVPVSVIETPPVIPLAIRAYVMGPKGEPTTLTEYWGDISEDLLK 115
>RL3_METAC (Q8TRU7) 50S ribosomal protein L3P| Length = 337 Score = 78.2 bits (191), Expect = 2e-14 Identities = 43/111 (38%), Positives = 61/111 (54%), Gaps = 2/111 (1%) Frame = +3 Query: 48 PRHGSLGFLPRKRAARHRGKVKSFPK--DDPKKPVHLTAMMGYKAGMTHVVRDLDRPGSK 221 P+ GSL F PRKRA H + +++P+ +PK L + GYK GMTHV+ D S Sbjct: 7 PKRGSLAFSPRKRAKSHIPRFRAWPEATGEPK----LQSFAGYKVGMTHVIMVDDTKNSL 62 Query: 222 MHKREVVEAVTIIETPPMVIVGVVGYVETPRGLRSLTTVWAEHLSDEVKRR 374 E+ VT+IETP + + + Y E G +++ VWA L E+KRR Sbjct: 63 TQGMEISVPVTVIETPAIRVAAIRAYAEDSTGEKAIAEVWAADLDPELKRR 113
>RL3_METMA (Q8PV50) 50S ribosomal protein L3P| Length = 337 Score = 76.6 bits (187), Expect = 5e-14 Identities = 43/111 (38%), Positives = 60/111 (54%), Gaps = 2/111 (1%) Frame = +3 Query: 48 PRHGSLGFLPRKRAARHRGKVKSFPK--DDPKKPVHLTAMMGYKAGMTHVVRDLDRPGSK 221 P+ GSL F PRKRA H + +++P+ +PK L + GYK GMTHV+ D S Sbjct: 7 PKRGSLAFSPRKRAKSHIPRFRAWPEATGEPK----LQSFAGYKVGMTHVIMVDDIKNSL 62 Query: 222 MHKREVVEAVTIIETPPMVIVGVVGYVETPRGLRSLTTVWAEHLSDEVKRR 374 E+ VT+IETP + + V Y E G +++ WA L E+KRR Sbjct: 63 TQGMEISVPVTVIETPAIRVAAVRAYTEDSTGEKAIAEAWAADLDSELKRR 113
>RL3_PYRAE (Q8ZW52) 50S ribosomal protein L3P| Length = 338 Score = 76.3 bits (186), Expect = 6e-14 Identities = 44/108 (40%), Positives = 62/108 (57%), Gaps = 2/108 (1%) Frame = +3 Query: 36 KFEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGMTHVVRDLDRPG 215 K PR GS+G PRKRAA +V+++P+ + KP L YKAGM H V DRP Sbjct: 4 KINRPRRGSMGVYPRKRAADIVPRVRTWPEVNLGKPA-LLGFAAYKAGMLHAVVVDDRPT 62 Query: 216 SKMHKREVVEAVTIIETPPMVIVGVVGYVETPRG--LRSLTTVWAEHL 353 S ++ +EVV+AVT+++ PP+ + G Y P R++ VWA L Sbjct: 63 SPLYGKEVVKAVTVLDAPPLYVWGFRLYTLDPTNGYKRAVAEVWASEL 110
>RL3_SULAC (Q4JB40) 50S ribosomal protein L3P| Length = 342 Score = 75.9 bits (185), Expect = 8e-14 Identities = 45/116 (38%), Positives = 64/116 (55%), Gaps = 1/116 (0%) Frame = +3 Query: 24 MSHRKFEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGMTHVVRDL 203 M HRK +PR GS G PRKRA K++P + K+P L +GYKAGMTHV Sbjct: 1 MGHRKLSSPRRGSAGLRPRKRADEILPTPKNWPLVNLKEP-KLLGFIGYKAGMTHVYMID 59 Query: 204 DRPGSKMHKREVVEAVTIIETPPMVIVGVVGY-VETPRGLRSLTTVWAEHLSDEVK 368 D+P S + +EV VTI+E+PP++ + + Y +++ L L WA +K Sbjct: 60 DKPTSPNYGKEVYTPVTIVESPPILGLALRAYHIDSKGELSVLVDYWANFEEGSLK 115
>RL3_PYRFU (Q8TZZ8) 50S ribosomal protein L3P| Length = 365 Score = 74.3 bits (181), Expect = 2e-13 Identities = 43/101 (42%), Positives = 58/101 (57%) Frame = +3 Query: 36 KFEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGMTHVVRDLDRPG 215 K PR GSLGF PRKRA +++S+PK+ V + GYKAGMTH++ D PG Sbjct: 3 KVHRPRRGSLGFSPRKRAKSIVPRIRSWPKE---TEVRMLGFAGYKAGMTHILMIDDEPG 59 Query: 216 SKMHKREVVEAVTIIETPPMVIVGVVGYVETPRGLRSLTTV 338 + +E+ VTIIETPP+ + G+ Y GL + T V Sbjct: 60 -LTNGKEIFMPVTIIETPPLRVFGIRAYRMGYLGLETATEV 99
>RL3_PYRAB (Q9V1T5) 50S ribosomal protein L3P| Length = 361 Score = 73.6 bits (179), Expect = 4e-13 Identities = 42/101 (41%), Positives = 58/101 (57%) Frame = +3 Query: 36 KFEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGMTHVVRDLDRPG 215 K PR GSL F PRKRA +++S+PK+ V + GYKAGMTH++ D PG Sbjct: 3 KVHRPRRGSLAFSPRKRAKSIVPRIRSWPKE---TEVRMLGFAGYKAGMTHILMIDDEPG 59 Query: 216 SKMHKREVVEAVTIIETPPMVIVGVVGYVETPRGLRSLTTV 338 + +E+ VTIIETPP+ + G+ Y + GL + T V Sbjct: 60 -LTNGKEIFMPVTIIETPPLRVFGIRAYRQGYLGLETATEV 99
>RL3_PYRHO (O59418) 50S ribosomal protein L3P| Length = 362 Score = 70.9 bits (172), Expect = 3e-12 Identities = 40/97 (41%), Positives = 56/97 (57%) Frame = +3 Query: 36 KFEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGMTHVVRDLDRPG 215 K PR GSL F PRKRA +++S+PK+ V + GYKAGMTH++ D PG Sbjct: 3 KIHRPRKGSLAFSPRKRAKSIVPRIRSWPKE---TEVRMLGFAGYKAGMTHILMIDDEPG 59 Query: 216 SKMHKREVVEAVTIIETPPMVIVGVVGYVETPRGLRS 326 + +E+ VTIIETPP+ + G+ Y + GL + Sbjct: 60 -LTNGKEIFMPVTIIETPPLRVFGIRAYRQGYLGLET 95
>RL3_SULSO (Q9UXA8) 50S ribosomal protein L3P| Length = 351 Score = 68.9 bits (167), Expect = 1e-11 Identities = 36/104 (34%), Positives = 58/104 (55%) Frame = +3 Query: 24 MSHRKFEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGMTHVVRDL 203 M HRK +PR GS G PRKR++ +++P+ + + P L +GYK GMTHV Sbjct: 1 MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQINSQNP-KLLGFVGYKVGMTHVFMID 59 Query: 204 DRPGSKMHKREVVEAVTIIETPPMVIVGVVGYVETPRGLRSLTT 335 D P S + +E+ VT++E PP++ + + Y +G ++ T Sbjct: 60 DWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAIDGKGEPNVIT 103
>RL3_NANEQ (P60458) 50S ribosomal protein L3P| Length = 321 Score = 68.6 bits (166), Expect = 1e-11 Identities = 37/113 (32%), Positives = 63/113 (55%) Frame = +3 Query: 45 APRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGMTHVVRDLDRPGSKM 224 APR GS+GF PRKRA+R ++K++PK + KP+ A YK GMTH + ++ Sbjct: 8 APRRGSMGFWPRKRASRIYPRIKTWPKIEEIKPL---AFAAYKVGMTHTILNI------- 57 Query: 225 HKREVVEAVTIIETPPMVIVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 383 + V VT++E P ++++G Y + L+ +++++ L V R+ K Sbjct: 58 NGERVFTPVTVLEAPELLVIGAKAYKKENGALKEISSLYFNDLPQYVFRKIPK 110
>RL3_THEAC (Q9HIQ9) 50S ribosomal protein L3P| Length = 331 Score = 57.0 bits (136), Expect = 4e-08 Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 1/109 (0%) Frame = +3 Query: 51 RHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGMTHVVRDLDRPGSKMHK 230 R GS+ + PR RA K++S+P + K V + G+K GMTHV R S Sbjct: 8 RRGSMAYYPRVRAKSVDPKIRSWP--EIKGEVKVQGFAGFKVGMTHVEMIDYRKKSVTAG 65 Query: 231 REVVEAVTIIETPPMVIVGVVGYVETPRG-LRSLTTVWAEHLSDEVKRR 374 + ++ VT++E PP+ +VG Y E G L + WA+ L E+ R+ Sbjct: 66 QPILVPVTVVEVPPLDVVGYRLYDEDAEGNLVVVFEAWAKDLDKEIFRK 114
>RL3_THEVO (Q97BX7) 50S ribosomal protein L3P| Length = 331 Score = 54.7 bits (130), Expect = 2e-07 Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 1/109 (0%) Frame = +3 Query: 51 RHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGMTHVVRDLDRPGSKMHK 230 R GS+ + PR RA +++S+P + PV + G+K GMTHV R S Sbjct: 8 RRGSMAYYPRVRAKSIEPRIRSWP--EISGPVKVQGFAGFKVGMTHVEMVDYRKTSVTAG 65 Query: 231 REVVEAVTIIETPPMVIVGVVGYVETPRG-LRSLTTVWAEHLSDEVKRR 374 + + VT+IE PP+ ++G+ Y E G + + W ++L E+ ++ Sbjct: 66 QPIFVPVTVIEVPPLDVIGIRLYDEDEEGNMVVVYEKWTQNLDKELFKK 114
>MRCKG_HUMAN (Q6DT37) Serine/threonine-protein kinase MRCK gamma (EC 2.7.11.1)| (CDC42-binding protein kinase gamma) (Myotonic dystrophy kinase-related CDC42-binding kinase gamma) (Myotonic dystrophy protein kinase-like alpha) (MRCK gamma) (DMPK-like gamma Length = 1551 Score = 34.3 bits (77), Expect = 0.27 Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Frame = +3 Query: 462 RELERIRKYCTVVRVLAHTQIR-KTGLKQKEGPPYGDPGQ 578 RELE++RK +R +R K L Q +GPP G PGQ Sbjct: 444 RELEQLRKEVQTLRDRLPEMLRDKASLSQTDGPPAGSPGQ 483
>IF2G_METMA (Q8PZA0) Translation initiation factor 2 gamma subunit| (eIF-2-gamma) (aIF2-gamma) Length = 431 Score = 29.6 bits (65), Expect = 6.7 Identities = 15/36 (41%), Positives = 25/36 (69%), Gaps = 2/36 (5%) Frame = +3 Query: 270 PMVIVGVVGYVETPRG--LRSLTTVWAEHLSDEVKR 371 P V +G+VG+V+ + +R+L+ VW + S+EVKR Sbjct: 27 PCVNIGMVGHVDHGKTTLVRALSGVWTDTHSEEVKR 62
>TULP1_HUMAN (O00294) Tubby-related protein 1 (Tubby-like protein 1)| Length = 542 Score = 29.3 bits (64), Expect = 8.7 Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 1/89 (1%) Frame = +3 Query: 6 PSKGSRMSHRKFEAPRHGS-LGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAMMGYKAGM 182 P+ R+ ++ EAP G PRK A RG+ + P DP + +A Sbjct: 35 PAPAQRLRKKRTEAPESPCPTGSKPRKPGAGRRGRPREEPSPDPAQA---------RAPQ 85 Query: 183 THVVRDLDRPGSKMHKREVVEAVTIIETP 269 T R L P +K KR+ E + P Sbjct: 86 TVYARFLRDPEAK--KRDPRETFLVARAP 112
>PRD13_HUMAN (Q9H4Q3) PR domain zinc finger protein 13 (PR domain-containing| protein 13) Length = 717 Score = 29.3 bits (64), Expect = 8.7 Identities = 12/29 (41%), Positives = 14/29 (48%) Frame = +2 Query: 236 GCRGRHHHRDSSYGHRRCCRLRRDPPWSP 322 G G HHH + + H C L DPP P Sbjct: 358 GGAGHHHHHHAHHHHHPKCLLAGDPPPPP 386 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,700,107 Number of Sequences: 219361 Number of extensions: 1451053 Number of successful extensions: 4647 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 4435 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4592 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5044307840 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
