ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart56c06 |
|---|---|
| Clone Library Name | barley_pub |
>STH_ARATH (Q9SID1) Salt tolerance-like protein| Length = 238 Score = 146 bits (369), Expect = 4e-35 Identities = 71/110 (64%), Positives = 75/110 (68%) Frame = +3 Query: 120 MKIQCDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDIC 299 MKIQCD LCA+CDVE+HAANKLASKHQRL LD+L K P CDIC Sbjct: 1 MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTKFPPCDIC 60 Query: 300 QEKAAFIFCVEDRALFCRDCDEPIHVPGTLPGNHQRYLATGIRVGLGPVS 449 EKAAFIFCVEDRAL CRDCDE H P T NHQR+LATGIRV L S Sbjct: 61 LEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLATGIRVALSSTS 110
>STO_ARATH (Q96288) Salt-tolerance protein| Length = 248 Score = 145 bits (365), Expect = 1e-34 Identities = 69/106 (65%), Positives = 76/106 (71%) Frame = +3 Query: 120 MKIQCDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDIC 299 MKIQCD LC +CD+EIHAANKLASKHQRL L++L K PRCDIC Sbjct: 1 MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDIC 60 Query: 300 QEKAAFIFCVEDRALFCRDCDEPIHVPGTLPGNHQRYLATGIRVGL 437 QEKAAFIFCVEDRAL CRDCDE IHV + NHQR+LATGI+V L Sbjct: 61 QEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVAL 106
>STHY_ARATH (Q9SYM2) Putative salt tolerance-like protein At1g78600| Length = 299 Score = 117 bits (294), Expect = 2e-26 Identities = 55/111 (49%), Positives = 67/111 (60%) Frame = +3 Query: 120 MKIQCDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDIC 299 MKIQC+ LC CD +IHAANKLA KHQR+PL A + +P+CDIC Sbjct: 1 MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDIC 60 Query: 300 QEKAAFIFCVEDRALFCRDCDEPIHVPGTLPGNHQRYLATGIRVGLGPVST 452 QE + F FC++DRAL CR CD IH HQR+L TGI+VGL + T Sbjct: 61 QEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDT 111
>STHX_ARATH (Q9LQZ7) Putative salt tolerance-like protein At1g75540| Length = 331 Score = 94.0 bits (232), Expect = 3e-19 Identities = 44/107 (41%), Positives = 57/107 (53%), Gaps = 3/107 (2%) Frame = +3 Query: 120 MKIQCDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPL---DALGAKLPRC 290 MKI+CD LC CD ++H ANKLASKH R L + P C Sbjct: 1 MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC 60 Query: 291 DICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLPGNHQRYLATGIRV 431 DICQ+K A +FC +DRA+ C+DCD IH H R+L TG+++ Sbjct: 61 DICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKL 107
>COL3_ARATH (Q9SK53) Zinc finger protein CONSTANS-LIKE 3| Length = 294 Score = 67.8 bits (164), Expect = 2e-11 Identities = 35/107 (32%), Positives = 47/107 (43%) Frame = +3 Query: 132 CDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDICQEKA 311 CDS LC CD +IH ANKLAS+H+R+ L C++C++ Sbjct: 8 CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWL---------CEVCEQAP 58 Query: 312 AFIFCVEDRALFCRDCDEPIHVPGTLPGNHQRYLATGIRVGLGPVST 452 A + C D A C CD IH L H+R T +GP + Sbjct: 59 AHVTCKADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAVGPAKS 105
>COL1_ARATH (O50055) Zinc finger protein CONSTANS-LIKE 1| Length = 355 Score = 64.3 bits (155), Expect = 2e-10 Identities = 31/92 (33%), Positives = 41/92 (44%) Frame = +3 Query: 132 CDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDICQEKA 311 CD+ LC+ CD ++HAAN+LAS+H+R+ + C C+ Sbjct: 12 CDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRV---------CQSCERAP 62 Query: 312 AFIFCVEDRALFCRDCDEPIHVPGTLPGNHQR 407 A FC D A C CD IH L HQR Sbjct: 63 AAFFCKADAASLCTTCDSEIHSANPLARRHQR 94 Score = 39.3 bits (90), Expect = 0.008 Identities = 17/43 (39%), Positives = 21/43 (48%) Frame = +3 Query: 132 CDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPL 260 C S LC CD EIH+AN LA +HQR+P+ Sbjct: 55 CQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPI 97
>COL4_ARATH (Q940T9) Zinc finger protein CONSTANS-LIKE 4| Length = 362 Score = 63.9 bits (154), Expect = 3e-10 Identities = 32/96 (33%), Positives = 43/96 (44%) Frame = +3 Query: 132 CDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDICQEKA 311 CDS LC CD ++HAANKLAS+H R+ + C++C++ Sbjct: 6 CDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWM---------CEVCEQAP 56 Query: 312 AFIFCVEDRALFCRDCDEPIHVPGTLPGNHQRYLAT 419 A + C D A C CD IH L H+R T Sbjct: 57 AHVTCKADAAALCVTCDRDIHSANPLARRHERVPVT 92
>COL2_ARATH (Q96502) Zinc finger protein CONSTANS-LIKE 2| Length = 347 Score = 60.8 bits (146), Expect = 3e-09 Identities = 32/105 (30%), Positives = 43/105 (40%) Frame = +3 Query: 93 QRESKKSRGMKIQCDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALG 272 + ES +S CD+ LC CD +HAAN++AS+H+R+ + Sbjct: 3 KEESNESGTWARACDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRV---- 58 Query: 273 AKLPRCDICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLPGNHQR 407 C C+ A C D A C CD IH L HQR Sbjct: 59 -----CQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQR 98 Score = 41.6 bits (96), Expect = 0.002 Identities = 19/48 (39%), Positives = 23/48 (47%) Frame = +3 Query: 132 CDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGA 275 C S LC CD EIH+AN LA +HQR+P+ L A Sbjct: 59 CQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPILPLSA 106
>CONS_ARATH (Q39057) Zinc finger protein CONSTANS| Length = 373 Score = 58.5 bits (140), Expect = 1e-08 Identities = 30/106 (28%), Positives = 46/106 (43%) Frame = +3 Query: 90 GQRESKKSRGMKIQCDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDAL 269 G E+ ++R CD+ LC CD ++H+AN++AS+H+R+ + Sbjct: 10 GSGENNRAR----PCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRV--- 62 Query: 270 GAKLPRCDICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLPGNHQR 407 C+ C+ A C D A C CD +H L HQR Sbjct: 63 ------CESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQR 102 Score = 39.3 bits (90), Expect = 0.008 Identities = 16/43 (37%), Positives = 22/43 (51%) Frame = +3 Query: 132 CDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPL 260 C+S LC CD E+H+AN LA +HQR+P+ Sbjct: 63 CESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPI 105
>COL13_ARATH (O82256) Zinc finger protein CONSTANS-LIKE 13| Length = 332 Score = 51.2 bits (121), Expect = 2e-06 Identities = 25/81 (30%), Positives = 36/81 (44%) Frame = +3 Query: 132 CDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDICQEKA 311 CD LC CD ++H AN+L +KH R L CD C E Sbjct: 13 CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLL---------CDSCNESP 63 Query: 312 AFIFCVEDRALFCRDCDEPIH 374 + +FC +R++ C++CD H Sbjct: 64 SSLFCETERSVLCQNCDWQHH 84 Score = 39.7 bits (91), Expect = 0.006 Identities = 16/42 (38%), Positives = 20/42 (47%) Frame = +3 Query: 288 CDICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLPGNHQRYL 413 CD C A ++C D A C CD+ +HV L H R L Sbjct: 13 CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSL 54
>COL15_ARATH (Q9C7E8) Zinc finger protein CONSTANS-LIKE 15| Length = 433 Score = 49.7 bits (117), Expect = 6e-06 Identities = 26/104 (25%), Positives = 40/104 (38%) Frame = +3 Query: 111 SRGMKIQCDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPRC 290 S ++ CD LC CD ++H AN L+ KH R + C Sbjct: 2 SSSERVPCDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQI---------C 52 Query: 291 DICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLPGNHQRYLATG 422 D C + + C D + C++CD +H ++ H R G Sbjct: 53 DNCGNEPVSVRCFTDNLILCQECDWDVHGSCSVSDAHVRSAVEG 96
>COL14_ARATH (O22800) Zinc finger protein CONSTANS-LIKE 14| Length = 402 Score = 49.7 bits (117), Expect = 6e-06 Identities = 23/78 (29%), Positives = 36/78 (46%) Frame = +3 Query: 189 LCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDICQEKAAFIFCVEDRALFCRDCDEP 368 LC CD +H+AN L+ KH R + CD C ++ + C D + C++CD Sbjct: 31 LCLPCDQHVHSANLLSRKHVRSQI---------CDNCSKEPVSVRCFTDNLVLCQECDWD 81 Query: 369 IHVPGTLPGNHQRYLATG 422 +H + H+R G Sbjct: 82 VHGSCSSSATHERSAVEG 99 Score = 38.5 bits (88), Expect = 0.014 Identities = 15/40 (37%), Positives = 20/40 (50%) Frame = +3 Query: 288 CDICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLPGNHQR 407 C+ C E+ A +FC D A C CD+ +H L H R Sbjct: 12 CEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVR 51
>COLX_ARATH (Q9C9F4) Putative zinc finger protein At1g68190| Length = 356 Score = 47.0 bits (110), Expect = 4e-05 Identities = 21/73 (28%), Positives = 35/73 (47%) Frame = +3 Query: 189 LCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDICQEKAAFIFCVEDRALFCRDCDEP 368 LC CD ++H+AN L+ +H R L CD C+ + + C + + C C++ Sbjct: 33 LCLTCDAKVHSANSLSGRHLRTVL---------CDSCKNQPCVVRCFDHKMFLCHGCNDK 83 Query: 369 IHVPGTLPGNHQR 407 H G+ H+R Sbjct: 84 FHGGGS--SEHRR 94 Score = 39.7 bits (91), Expect = 0.006 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = +3 Query: 288 CDICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLPGNHQR 407 C+ C+ A ++C+ D A C CD +H +L G H R Sbjct: 14 CEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLR 53
>COL5_ARATH (Q9FHH8) Zinc finger protein CONSTANS-LIKE 5| Length = 355 Score = 46.6 bits (109), Expect = 5e-05 Identities = 24/92 (26%), Positives = 37/92 (40%) Frame = +3 Query: 132 CDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDICQEKA 311 CD+ LC CD IH+ ++H+R+ + C++C++ Sbjct: 22 CDACKSVTAAVFCRVDSAFLCIACDTRIHSF----TRHERVWV---------CEVCEQAP 68 Query: 312 AFIFCVEDRALFCRDCDEPIHVPGTLPGNHQR 407 A + C D A C CD IH L H+R Sbjct: 69 AAVTCKADAAALCVSCDADIHSANPLASRHER 100 Score = 39.7 bits (91), Expect = 0.006 Identities = 14/25 (56%), Positives = 21/25 (84%) Frame = +3 Query: 189 LCARCDVEIHAANKLASKHQRLPLD 263 LC CD +IH+AN LAS+H+R+P++ Sbjct: 80 LCVSCDADIHSANPLASRHERVPVE 104 Score = 35.0 bits (79), Expect = 0.16 Identities = 15/35 (42%), Positives = 17/35 (48%) Frame = +3 Query: 270 GAKLPRCDICQEKAAFIFCVEDRALFCRDCDEPIH 374 GA CD C+ A +FC D A C CD IH Sbjct: 16 GAAARSCDACKSVTAAVFCRVDSAFLCIACDTRIH 50
>COL9_ARATH (Q9SSE5) Zinc finger protein CONSTANS-LIKE 9| Length = 372 Score = 46.2 bits (108), Expect = 7e-05 Identities = 20/58 (34%), Positives = 31/58 (53%) Frame = +3 Query: 189 LCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDICQEKAAFIFCVEDRALFCRDCD 362 LC CD +H+AN L+ +H R + C+ C + A + CVE+R C++CD Sbjct: 24 LCLSCDRSVHSANALSKRHSRTLV---------CERCNAQPATVRCVEERVSLCQNCD 72 Score = 40.4 bits (93), Expect = 0.004 Identities = 15/42 (35%), Positives = 20/42 (47%) Frame = +3 Query: 288 CDICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLPGNHQRYL 413 CD C E+ + ++C D A C CD +H L H R L Sbjct: 5 CDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTL 46
>COL12_ARATH (Q9LJ44) Putative zinc finger protein CONSTANS-LIKE 12| Length = 337 Score = 44.3 bits (103), Expect = 3e-04 Identities = 21/80 (26%), Positives = 36/80 (45%) Frame = +3 Query: 120 MKIQCDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDIC 299 M+ +CD LC CDV +H+AN L+ +H R + C+ C Sbjct: 1 MEPKCDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSLI---------CEKC 51 Query: 300 QEKAAFIFCVEDRALFCRDC 359 + A I C++++ +C+ C Sbjct: 52 FSQPAAIRCLDEKVSYCQGC 71 Score = 39.3 bits (90), Expect = 0.008 Identities = 17/44 (38%), Positives = 21/44 (47%) Frame = +3 Query: 282 PRCDICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLPGNHQRYL 413 P+CD C A I+C D A C +CD +H L H R L Sbjct: 3 PKCDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSL 46
>COL10_ARATH (Q9LUA9) Zinc finger protein CONSTANS-LIKE 10| Length = 373 Score = 43.1 bits (100), Expect = 6e-04 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 2/75 (2%) Frame = +3 Query: 189 LCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDICQEKAAFIFCVEDRALFCRDCDEP 368 LC CD +H+AN L+ +H R + C+ C + A + C ++R C++CD Sbjct: 24 LCLSCDRNVHSANALSKRHSRTLV---------CERCNAQPASVRCSDERVSLCQNCDWS 74 Query: 369 IH--VPGTLPGNHQR 407 H T +H+R Sbjct: 75 GHDGKNSTTTSHHKR 89 Score = 40.0 bits (92), Expect = 0.005 Identities = 15/42 (35%), Positives = 20/42 (47%) Frame = +3 Query: 288 CDICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLPGNHQRYL 413 CD C E+ + ++C D A C CD +H L H R L Sbjct: 5 CDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTL 46
>COL11_ARATH (O23379) Putative zinc finger protein CONSTANS-LIKE 11| Length = 330 Score = 42.4 bits (98), Expect = 0.001 Identities = 20/80 (25%), Positives = 32/80 (40%) Frame = +3 Query: 120 MKIQCDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDIC 299 M+ +CD LC CDV +H+AN L+ +H R L C+ C Sbjct: 1 MEARCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLL---------CEKC 51 Query: 300 QEKAAFIFCVEDRALFCRDC 359 + + C+ + C+ C Sbjct: 52 SLQPTAVHCMNENVSLCQGC 71 Score = 40.0 bits (92), Expect = 0.005 Identities = 17/43 (39%), Positives = 21/43 (48%) Frame = +3 Query: 285 RCDICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLPGNHQRYL 413 RCD C + A I+C D A C +CD +H L H R L Sbjct: 4 RCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSL 46
>COL16_ARATH (Q8RWD0) Zinc finger protein CONSTANS-LIKE 16| Length = 417 Score = 41.6 bits (96), Expect = 0.002 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Frame = +3 Query: 261 DALGAKLPR-CDICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLPGNHQR 407 +A+GAK R CD C ++ A +C D A C+ CD +H L H+R Sbjct: 7 NAVGAKTARACDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHER 56 Score = 32.7 bits (73), Expect = 0.79 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = +3 Query: 132 CDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPL 260 CDS LC CD +H+AN LA +H+R+ L Sbjct: 17 CDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERVRL 59
>COL8_ARATH (Q9M9B3) Putative zinc finger protein CONSTANS-LIKE 8| Length = 313 Score = 39.3 bits (90), Expect = 0.008 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%) Frame = +3 Query: 276 KLPR-CDICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLPGNHQR 407 K PR C++C K A +C D A C CDE +H + H+R Sbjct: 10 KQPRACELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHER 54 Score = 31.6 bits (70), Expect = 1.8 Identities = 12/24 (50%), Positives = 18/24 (75%) Frame = +3 Query: 189 LCARCDVEIHAANKLASKHQRLPL 260 LC CD +H+AN +A+KH+R+ L Sbjct: 34 LCHVCDESVHSANHVATKHERVCL 57
>COL6_ARATH (Q8LG76) Zinc finger protein CONSTANS-LIKE 6| Length = 406 Score = 38.5 bits (88), Expect = 0.014 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Frame = +3 Query: 264 ALGAKLPR-CDICQEKAAFIFCVEDRALFCRDCDEPIHVPGTLPGNHQR 407 A+G K R CD C ++ A +C D A C CD +H L H+R Sbjct: 8 AVGGKTARACDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHER 56 Score = 34.3 bits (77), Expect = 0.27 Identities = 16/48 (33%), Positives = 22/48 (45%) Frame = +3 Query: 132 CDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGA 275 CDS LC CD +H+AN LA +H+R+ L + A Sbjct: 17 CDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERVRLKSASA 64
>ARD1_CAEEL (Q09654) Putative GTP-binding protein ard-1 homolog| Length = 539 Score = 37.4 bits (85), Expect = 0.032 Identities = 24/89 (26%), Positives = 32/89 (35%), Gaps = 5/89 (5%) Frame = +3 Query: 108 KSRGMKIQCDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPR 287 K R + ++CD LC RC H+ N L SKH+R+PL L Sbjct: 100 KERLLNLECDEDSEHVAVIYCTVCDSNLCERCSESTHSTNVL-SKHRRIPLTEKPPPLVH 158 Query: 288 CDICQEKAAFIFCVE-----DRALFCRDC 359 C + C E + L C C Sbjct: 159 CRLHSSYVVEFVCKELSCDTESPLMCMMC 187
>ZFYV1_HUMAN (Q9HBF4) Zinc finger FYVE domain-containing protein 1 (Double| FYVE-containing protein 1) (Tandem FYVE fingers-1) (SR3) Length = 777 Score = 34.3 bits (77), Expect = 0.27 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 9/73 (12%) Frame = +3 Query: 192 CARCDVEIHAANKLASKHQRLPLDALGAKLPRCDICQEKAAFIFCVEDRAL--------- 344 C RC+ E+H +L + H+R+ L +P CD+C+ + + V RA+ Sbjct: 42 CLRCEEELHRQERLRN-HERIRLKP--GHVPYCDLCKGLSGHLPGVRQRAIVRCQTCKIN 98 Query: 345 FCRDCDEPIHVPG 383 C +C + H G Sbjct: 99 LCLECQKRTHSGG 111
>COL7_ARATH (Q9C9A9) Putative zinc finger protein CONSTANS-LIKE 7| Length = 392 Score = 34.3 bits (77), Expect = 0.27 Identities = 13/26 (50%), Positives = 18/26 (69%) Frame = +3 Query: 189 LCARCDVEIHAANKLASKHQRLPLDA 266 LC CD IH+AN LA +H+R+ L + Sbjct: 42 LCQSCDASIHSANHLAKRHERVRLQS 67 Score = 34.3 bits (77), Expect = 0.27 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Frame = +3 Query: 288 CDICQEKA-AFIFCVEDRALFCRDCDEPIHVPGTLPGNHQR 407 CD C +++ A +C D A C+ CD IH L H+R Sbjct: 22 CDACMKRSRASWYCPADDAFLCQSCDASIHSANHLAKRHER 62
>ZFYV1_MOUSE (Q810J8) Zinc finger FYVE domain-containing protein 1| Length = 777 Score = 33.1 bits (74), Expect = 0.60 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 9/73 (12%) Frame = +3 Query: 192 CARCDVEIHAANKLASKHQRLPLDALGAKLPRCDICQ---------EKAAFIFCVEDRAL 344 C RC+ E+H +L + H+R+ L A +P CD C+ + A + C + Sbjct: 42 CLRCEEELHRQERLRN-HERIRLKA--GHVPYCDPCKGPNGHSPGVRQRAAVRCQTCKIN 98 Query: 345 FCRDCDEPIHVPG 383 C +C + H G Sbjct: 99 LCLECQKRTHSGG 111
>ARD1_HUMAN (P36406) GTP-binding protein ARD-1 (ADP-ribosylation factor domain| protein 1) (Tripartite motif protein 23) (RING finger protein 46) Length = 574 Score = 32.3 bits (72), Expect = 1.0 Identities = 23/84 (27%), Positives = 31/84 (36%), Gaps = 4/84 (4%) Frame = +3 Query: 126 IQCDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDICQE 305 I+CD LC+ C H+ LA KH+R+PL + C Q Sbjct: 125 IRCDEDEAHLASVYCTVCATHLCSECSQVTHSTKTLA-KHRRVPLADKPHEKTMCSQHQV 183 Query: 306 KAAFIFCVED----RALFCRDCDE 365 A C+E+ L C C E Sbjct: 184 HAIEFVCLEEGCQTSPLMCCVCKE 207
>YS85_CAEEL (Q09623) Hypothetical RING finger protein ZK945.5 in chromosome II| Length = 250 Score = 32.0 bits (71), Expect = 1.3 Identities = 21/95 (22%), Positives = 32/95 (33%), Gaps = 6/95 (6%) Frame = +3 Query: 93 QRESKKSRGMKIQCDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALG 272 ++ KK R CD LC C IH+ + LA +++ Sbjct: 93 EKNEKKERNKNGVCDENTNHHASNYCETCDADLCEECWTWIHSISTLAHHEKKM------ 146 Query: 273 AKLPRCDICQEKAAFIFCVEDRA------LFCRDC 359 P C K+ + C+ DR L C +C Sbjct: 147 ISTPDCQFHPGKSISLVCMRDRCKKRQNRLMCSEC 181
>ARD1_RAT (P36407) GTP-binding protein ARD-1 (ADP-ribosylation factor domain| protein 1) (Tripartite motif protein 23) (Fragment) Length = 554 Score = 31.6 bits (70), Expect = 1.8 Identities = 23/84 (27%), Positives = 31/84 (36%), Gaps = 4/84 (4%) Frame = +3 Query: 126 IQCDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDICQE 305 I+CD LC+ C H+ LA KH+R+PL + C Q Sbjct: 105 IRCDEDEAHVASVYCTVCATHLCSECSQVTHSTKTLA-KHRRVPLADKPHEKTMCCQHQV 163 Query: 306 KAAFIFCVEDRA----LFCRDCDE 365 A C+E+ L C C E Sbjct: 164 HAIEFVCLEEACQTSPLMCCVCKE 187
>ARD1_MOUSE (Q8BGX0) GTP-binding protein ARD-1 (ADP-ribosylation factor domain| protein 1) (Tripartite motif protein 23) Length = 574 Score = 30.4 bits (67), Expect = 3.9 Identities = 23/84 (27%), Positives = 31/84 (36%), Gaps = 4/84 (4%) Frame = +3 Query: 126 IQCDSXXXXXXXXXXXXXXXXLCARCDVEIHAANKLASKHQRLPLDALGAKLPRCDICQE 305 I+CD LC+ C H+ LA KH+R+PL + C Q Sbjct: 125 IRCDEDEAHVASVYCTVCATHLCSDCSQVTHSTKTLA-KHRRVPLADKPHEKTMCCQHQV 183 Query: 306 KAAFIFCVED----RALFCRDCDE 365 A C+E+ L C C E Sbjct: 184 HAIEFVCLEEGCQTSPLMCCVCKE 207
>METE_SALTY (Q9L6N1) 5-methyltetrahydropteroyltriglutamate--homocysteine| methyltransferase (EC 2.1.1.14) (Methionine synthase, vitamin-B12 independent isozyme) (Cobalamin-independent methionine synthase) Length = 753 Score = 30.0 bits (66), Expect = 5.1 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 7/63 (11%) Frame = +3 Query: 213 IHAANKLASKHQRLPLDAL-------GAKLPRCDICQEKAAFIFCVEDRALFCRDCDEPI 371 IH + +A HQRLP+D L G + R D+ ++ A V RAL+ + Sbjct: 266 IHGKDDVAELHQRLPVDWLLSAGLINGRNVWRADLTEKYAQINAIVGKRALWVASSCSLL 325 Query: 372 HVP 380 H P Sbjct: 326 HSP 328
>TRI46_MOUSE (Q7TNM2) Tripartite motif protein 46 (Tripartite, fibronectin| type-III and C-terminal SPRY motif protein) Length = 759 Score = 29.6 bits (65), Expect = 6.7 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 2/46 (4%) Frame = +3 Query: 288 CDICQEKA--AFIFCVEDRALFCRDCDEPIHVPGTLPGNHQRYLAT 419 C +C+ A C E RA FC +C + H GT H+ L T Sbjct: 172 CQLCKPPPLEATKGCTECRATFCNECFKLFHPWGTQKAQHEPTLPT 217
>TRI46_HUMAN (Q7Z4K8) Tripartite motif protein 46 (Tripartite, fibronectin| type-III and C-terminal SPRY motif protein) Length = 759 Score = 29.6 bits (65), Expect = 6.7 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 2/46 (4%) Frame = +3 Query: 288 CDICQEKA--AFIFCVEDRALFCRDCDEPIHVPGTLPGNHQRYLAT 419 C +C+ A C E RA FC +C + H GT H+ L T Sbjct: 172 CQLCKPPPLEATKGCTECRATFCNECFKLFHPWGTQKAQHEPTLPT 217 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.130 0.377 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 36,349,912 Number of Sequences: 219361 Number of extensions: 511095 Number of successful extensions: 1726 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 1643 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1696 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5044307840 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
