ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart56c06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009289.1| Triticum aestivum clone wlm0.pk0023.h3:fis, full insert mRNA sequence Length = 1225 Score = 787 bits (397), Expect = 0.0 Identities = 463/481 (96%), Gaps = 3/481 (0%) Strand = Plus / Plus Query: 50 cttatctcttctccggctcaagcctagcaaa-gcgctctccggccagcgagaaagcaaga 108 |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 8 cttatctcttctccggctca-gcctagcaaaagcgctctccggccagcgagaaagcaaga 66 Query: 109 aaagcagaggcatgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgt 168 | || ||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 67 ag-gcggaggcatgaagatccagtgcgactcgtgcggcgtcgcggcggccacggtggtgt 125 Query: 169 gctgcgcggacgaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaaca 228 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 126 gctgcgcggacgaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgctaaca 185 Query: 229 agctcgccagcaagcaccagaggctcccgctcgacgcgctcggcgccaagctcccgcgct 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 186 agctcgccagcaagcaccagaggctcccgctcgacgcgctcggcgccaagctcccgcgct 245 Query: 289 gcgacatctgccaggagaaggccgccttcatcttctgcgtcgaggacagggcgctcttct 348 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 246 gcgacatctgccaggagaaggccgccttcatcttctgcgtcgaggaccgggcgctcttct 305 Query: 349 gccgcgactgcgacgagcccatccacgtcccaggcacgctccccgggaaccaccagcgct 408 ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 306 gccgcgactgcgacgagcccatccacgtccccggcacgctctccgggaaccaccagcgct 365 Query: 409 acctcgccaccggcatccgcgtcggcctcggccccgtctccacctgcgccgccggggacc 468 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 366 acctcgccaccggcatccgcgtcggcctcggccccgtctccgcctgcgccgccggggacc 425 Query: 469 acggcgcaagccacgacgccgaccaccacgccccgccaaaggtcgcctgcgaccaccagc 528 ||||||| ||||||||||||||||||||||||||| |||||| ||||||| | ||||| Sbjct: 426 acggcgccgcccacgacgccgaccaccacgccccgcccaaggtctcctgcgagccccagc 485 Query: 529 c 529 | Sbjct: 486 c 486 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 535 cccagcccgccgccagcgctcagcaggttccctcgccgccgcagttcctgc 585 |||||||||||||| |||| |||||||| |||||||||||||||||||||| Sbjct: 480 cccagcccgccgcccgcgcgcagcaggtcccctcgccgccgcagttcctgc 530
>dbj|AB001883.1| Oryza sativa (japonica cultivar-group) mRNA for zinc finger protein, complete cds, clone:E10707 Length = 987 Score = 432 bits (218), Expect = e-118 Identities = 295/320 (92%), Gaps = 3/320 (0%) Strand = Plus / Plus Query: 117 ggcatgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcg 176 ||||||| ||||||||||||| |||||| || |||||||||||||||||||||||||||| Sbjct: 20 ggcatgaggatccagtgcgacgcgtgcgaggccgcggcggccacggtggtgtgctgcgcg 79 Query: 177 gacgaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgcc 236 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 80 gacgaggcggcgctgtgcgcgcgctgcgacgtcgagatccacgccgccaacaagctcgcc 139 Query: 237 agcaagcaccagaggctcccgctcgacgc---gctcggcgccaagctcccgcgctgcgac 293 |||||||||||| | |||||||||||||| |||| |||| ||||||||||||||| Sbjct: 140 agcaagcaccagcgcctcccgctcgacgccgcgctccccgccgccctcccgcgctgcgac 199 Query: 294 atctgccaggagaaggccgccttcatcttctgcgtcgaggacagggcgctcttctgccgc 353 |||||||||||||||| || |||||||||||||| ||||||||||||||||||||||| Sbjct: 200 gtctgccaggagaaggcggcgttcatcttctgcgtggaggacagggcgctcttctgccgg 259 Query: 354 gactgcgacgagcccatccacgtcccaggcacgctccccgggaaccaccagcgctacctc 413 |||||||||||||||||||||||||| || |||||| |||| |||||||||||||||||| Sbjct: 260 gactgcgacgagcccatccacgtcccggggacgctctccggcaaccaccagcgctacctc 319 Query: 414 gccaccggcatccgcgtcgg 433 ||||||||||||||||||| Sbjct: 320 accaccggcatccgcgtcgg 339
>ref|XM_473004.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 774 Score = 426 bits (215), Expect = e-116 Identities = 292/317 (92%), Gaps = 3/317 (0%) Strand = Plus / Plus Query: 120 atgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcggac 179 |||| ||||||||||||| |||||| || ||||||||||||||||||||||||||||||| Sbjct: 1 atgaggatccagtgcgacgcgtgcgaggccgcggcggccacggtggtgtgctgcgcggac 60 Query: 180 gaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgccagc 239 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 61 gaggcggcgctgtgcgcgcgctgcgacgtcgagatccacgccgccaacaagctcgccagc 120 Query: 240 aagcaccagaggctcccgctcgacgc---gctcggcgccaagctcccgcgctgcgacatc 296 ||||||||| | |||||||||||||| |||| |||| ||||||||||||||| || Sbjct: 121 aagcaccagcgcctcccgctcgacgccgcgctccccgccgccctcccgcgctgcgacgtc 180 Query: 297 tgccaggagaaggccgccttcatcttctgcgtcgaggacagggcgctcttctgccgcgac 356 |||||||||||||| || |||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 181 tgccaggagaaggcggcgttcatcttctgcgtggaggacagggcgctcttctgccgggac 240 Query: 357 tgcgacgagcccatccacgtcccaggcacgctccccgggaaccaccagcgctacctcgcc 416 ||||||||||||||||||||||| || |||||| |||| |||||||||||||||||| || Sbjct: 241 tgcgacgagcccatccacgtcccggggacgctctccggcaaccaccagcgctacctcacc 300 Query: 417 accggcatccgcgtcgg 433 ||||||||||||||||| Sbjct: 301 accggcatccgcgtcgg 317
>gb|AY109441.1| Zea mays CL359_1 mRNA sequence Length = 1551 Score = 404 bits (204), Expect = e-109 Identities = 289/316 (91%), Gaps = 1/316 (0%) Strand = Plus / Plus Query: 119 catgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcgga 178 ||||||||||||||||||| |||||| || |||||| ||||| |||||||||||||| || Sbjct: 93 catgaagatccagtgcgacgcgtgcgagggcgcggctgccaccgtggtgtgctgcgccga 152 Query: 179 cgaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgccag 238 |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 153 cgaggccgcgctgtgcgcgcgctgcgacgtcgagatccacgccgccaacaagctcgccag 212 Query: 239 caagcaccagaggctcccgctcgacgcgctcggcgccaagctcccgcgctgcgacatctg 298 |||||||||| | ||||||||||| || ||| ||||| ||||||||||||||| |||| Sbjct: 213 caagcaccagcgcctcccgctcgaggctctctccgccagcctcccgcgctgcgacgtctg 272 Query: 299 ccaggagaaggccgccttcatcttctgcgtcgaggacagggcgctcttctgccgcgactg 358 ||||||||| || || |||||||||||||| |||||| |||||||||||||||| ||||| Sbjct: 273 ccaggagaaagcggcgttcatcttctgcgtggaggaccgggcgctcttctgccgggactg 332 Query: 359 cgacgagcccatccacgtcccaggcacgctccccgggaaccaccagcgctacctcgccac 418 ||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||| Sbjct: 333 cgacgagcccatccacgtcccgggcacgctctccgggaacca-cagcgctacctcgccac 391 Query: 419 cggcatccgcgtcggc 434 || ||||||||||||| Sbjct: 392 cgacatccgcgtcggc 407 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 557 gcaggttccctcgccgccgcagttcctgc 585 |||||| |||||||||||||||||||||| Sbjct: 506 gcaggtgccctcgccgccgcagttcctgc 534
>ref|XM_466630.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1065 Score = 347 bits (175), Expect = 3e-92 Identities = 280/315 (88%) Strand = Plus / Plus Query: 120 atgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcggac 179 |||||||||||||||||| |||||| | ||||||||| |||||||||||||||||||| Sbjct: 125 atgaagatccagtgcgacgcgtgcgagagcgcggcggcggcggtggtgtgctgcgcggac 184 Query: 180 gaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgccagc 239 |||||||||||||||||| |||||||||||| | ||||| || |||||||| ||| | Sbjct: 185 gaggcggcgctgtgcgcggcgtgcgacgtggaggtgcacgcggcgaacaagctggccggg 244 Query: 240 aagcaccagaggctcccgctcgacgcgctcggcgccaagctcccgcgctgcgacatctgc 299 ||||||||| |||| ||||| || |||||| || | |||||||||||||||| | ||| Sbjct: 245 aagcaccagcggctgccgctggaggcgctctcggcgaggctcccgcgctgcgacgtgtgc 304 Query: 300 caggagaaggccgccttcatcttctgcgtcgaggacagggcgctcttctgccgcgactgc 359 ||||||||||| || |||||||||||||| |||||| | ||||||||||||||||||||| Sbjct: 305 caggagaaggcggcgttcatcttctgcgtggaggaccgcgcgctcttctgccgcgactgc 364 Query: 360 gacgagcccatccacgtcccaggcacgctccccgggaaccaccagcgctacctcgccacc 419 |||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||| Sbjct: 365 gacgagcccatccacgtccccggcacgctctccggcaaccaccagcgctacctcgccacc 424 Query: 420 ggcatccgcgtcggc 434 ||||||||||||||| Sbjct: 425 ggcatccgcgtcggc 439
>ref|XM_506858.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1058_F07.25 mRNA Length = 1078 Score = 347 bits (175), Expect = 3e-92 Identities = 280/315 (88%) Strand = Plus / Plus Query: 120 atgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcggac 179 |||||||||||||||||| |||||| | ||||||||| |||||||||||||||||||| Sbjct: 125 atgaagatccagtgcgacgcgtgcgagagcgcggcggcggcggtggtgtgctgcgcggac 184 Query: 180 gaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgccagc 239 |||||||||||||||||| |||||||||||| | ||||| || |||||||| ||| | Sbjct: 185 gaggcggcgctgtgcgcggcgtgcgacgtggaggtgcacgcggcgaacaagctggccggg 244 Query: 240 aagcaccagaggctcccgctcgacgcgctcggcgccaagctcccgcgctgcgacatctgc 299 ||||||||| |||| ||||| || |||||| || | |||||||||||||||| | ||| Sbjct: 245 aagcaccagcggctgccgctggaggcgctctcggcgaggctcccgcgctgcgacgtgtgc 304 Query: 300 caggagaaggccgccttcatcttctgcgtcgaggacagggcgctcttctgccgcgactgc 359 ||||||||||| || |||||||||||||| |||||| | ||||||||||||||||||||| Sbjct: 305 caggagaaggcggcgttcatcttctgcgtggaggaccgcgcgctcttctgccgcgactgc 364 Query: 360 gacgagcccatccacgtcccaggcacgctccccgggaaccaccagcgctacctcgccacc 419 |||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||| Sbjct: 365 gacgagcccatccacgtccccggcacgctctccggcaaccaccagcgctacctcgccacc 424 Query: 420 ggcatccgcgtcggc 434 ||||||||||||||| Sbjct: 425 ggcatccgcgtcggc 439
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 347 bits (175), Expect = 3e-92 Identities = 280/315 (88%) Strand = Plus / Plus Query: 120 atgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcggac 179 |||||||||||||||||| |||||| | ||||||||| |||||||||||||||||||| Sbjct: 23778769 atgaagatccagtgcgacgcgtgcgagagcgcggcggcggcggtggtgtgctgcgcggac 23778828 Query: 180 gaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgccagc 239 |||||||||||||||||| |||||||||||| | ||||| || |||||||| ||| | Sbjct: 23778829 gaggcggcgctgtgcgcggcgtgcgacgtggaggtgcacgcggcgaacaagctggccggg 23778888 Query: 240 aagcaccagaggctcccgctcgacgcgctcggcgccaagctcccgcgctgcgacatctgc 299 ||||||||| |||| ||||| || |||||| || | |||||||||||||||| | ||| Sbjct: 23778889 aagcaccagcggctgccgctggaggcgctctcggcgaggctcccgcgctgcgacgtgtgc 23778948 Query: 300 caggagaaggccgccttcatcttctgcgtcgaggacagggcgctcttctgccgcgactgc 359 ||||||||||| || |||||||||||||| |||||| | ||||||||||||||||||||| Sbjct: 23778949 caggagaaggcggcgttcatcttctgcgtggaggaccgcgcgctcttctgccgcgactgc 23779008 Query: 360 gacgagcccatccacgtcccaggcacgctccccgggaaccaccagcgctacctcgccacc 419 |||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||| Sbjct: 23779009 gacgagcccatccacgtccccggcacgctctccggcaaccaccagcgctacctcgccacc 23779068 Query: 420 ggcatccgcgtcggc 434 ||||||||||||||| Sbjct: 23779069 ggcatccgcgtcggc 23779083
>dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0030C08 Length = 163423 Score = 347 bits (175), Expect = 3e-92 Identities = 280/315 (88%) Strand = Plus / Plus Query: 120 atgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcggac 179 |||||||||||||||||| |||||| | ||||||||| |||||||||||||||||||| Sbjct: 435 atgaagatccagtgcgacgcgtgcgagagcgcggcggcggcggtggtgtgctgcgcggac 494 Query: 180 gaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgccagc 239 |||||||||||||||||| |||||||||||| | ||||| || |||||||| ||| | Sbjct: 495 gaggcggcgctgtgcgcggcgtgcgacgtggaggtgcacgcggcgaacaagctggccggg 554 Query: 240 aagcaccagaggctcccgctcgacgcgctcggcgccaagctcccgcgctgcgacatctgc 299 ||||||||| |||| ||||| || |||||| || | |||||||||||||||| | ||| Sbjct: 555 aagcaccagcggctgccgctggaggcgctctcggcgaggctcccgcgctgcgacgtgtgc 614 Query: 300 caggagaaggccgccttcatcttctgcgtcgaggacagggcgctcttctgccgcgactgc 359 ||||||||||| || |||||||||||||| |||||| | ||||||||||||||||||||| Sbjct: 615 caggagaaggcggcgttcatcttctgcgtggaggaccgcgcgctcttctgccgcgactgc 674 Query: 360 gacgagcccatccacgtcccaggcacgctccccgggaaccaccagcgctacctcgccacc 419 |||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||| Sbjct: 675 gacgagcccatccacgtccccggcacgctctccggcaaccaccagcgctacctcgccacc 734 Query: 420 ggcatccgcgtcggc 434 ||||||||||||||| Sbjct: 735 ggcatccgcgtcggc 749
>dbj|AP004111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1058_F07 Length = 95841 Score = 347 bits (175), Expect = 3e-92 Identities = 280/315 (88%) Strand = Plus / Plus Query: 120 atgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcggac 179 |||||||||||||||||| |||||| | ||||||||| |||||||||||||||||||| Sbjct: 89353 atgaagatccagtgcgacgcgtgcgagagcgcggcggcggcggtggtgtgctgcgcggac 89412 Query: 180 gaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgccagc 239 |||||||||||||||||| |||||||||||| | ||||| || |||||||| ||| | Sbjct: 89413 gaggcggcgctgtgcgcggcgtgcgacgtggaggtgcacgcggcgaacaagctggccggg 89472 Query: 240 aagcaccagaggctcccgctcgacgcgctcggcgccaagctcccgcgctgcgacatctgc 299 ||||||||| |||| ||||| || |||||| || | |||||||||||||||| | ||| Sbjct: 89473 aagcaccagcggctgccgctggaggcgctctcggcgaggctcccgcgctgcgacgtgtgc 89532 Query: 300 caggagaaggccgccttcatcttctgcgtcgaggacagggcgctcttctgccgcgactgc 359 ||||||||||| || |||||||||||||| |||||| | ||||||||||||||||||||| Sbjct: 89533 caggagaaggcggcgttcatcttctgcgtggaggaccgcgcgctcttctgccgcgactgc 89592 Query: 360 gacgagcccatccacgtcccaggcacgctccccgggaaccaccagcgctacctcgccacc 419 |||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||| Sbjct: 89593 gacgagcccatccacgtccccggcacgctctccggcaaccaccagcgctacctcgccacc 89652 Query: 420 ggcatccgcgtcggc 434 ||||||||||||||| Sbjct: 89653 ggcatccgcgtcggc 89667
>dbj|AK104293.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-G06, full insert sequence Length = 1065 Score = 347 bits (175), Expect = 3e-92 Identities = 280/315 (88%) Strand = Plus / Plus Query: 120 atgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcggac 179 |||||||||||||||||| |||||| | ||||||||| |||||||||||||||||||| Sbjct: 125 atgaagatccagtgcgacgcgtgcgagagcgcggcggcggcggtggtgtgctgcgcggac 184 Query: 180 gaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgccagc 239 |||||||||||||||||| |||||||||||| | ||||| || |||||||| ||| | Sbjct: 185 gaggcggcgctgtgcgcggcgtgcgacgtggaggtgcacgcggcgaacaagctggccggg 244 Query: 240 aagcaccagaggctcccgctcgacgcgctcggcgccaagctcccgcgctgcgacatctgc 299 ||||||||| |||| ||||| || |||||| || | |||||||||||||||| | ||| Sbjct: 245 aagcaccagcggctgccgctggaggcgctctcggcgaggctcccgcgctgcgacgtgtgc 304 Query: 300 caggagaaggccgccttcatcttctgcgtcgaggacagggcgctcttctgccgcgactgc 359 ||||||||||| || |||||||||||||| |||||| | ||||||||||||||||||||| Sbjct: 305 caggagaaggcggcgttcatcttctgcgtggaggaccgcgcgctcttctgccgcgactgc 364 Query: 360 gacgagcccatccacgtcccaggcacgctccccgggaaccaccagcgctacctcgccacc 419 |||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||| Sbjct: 365 gacgagcccatccacgtccccggcacgctctccggcaaccaccagcgctacctcgccacc 424 Query: 420 ggcatccgcgtcggc 434 ||||||||||||||| Sbjct: 425 ggcatccgcgtcggc 439
>dbj|AK061044.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-E01, full insert sequence Length = 1078 Score = 347 bits (175), Expect = 3e-92 Identities = 280/315 (88%) Strand = Plus / Plus Query: 120 atgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcggac 179 |||||||||||||||||| |||||| | ||||||||| |||||||||||||||||||| Sbjct: 125 atgaagatccagtgcgacgcgtgcgagagcgcggcggcggcggtggtgtgctgcgcggac 184 Query: 180 gaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgccagc 239 |||||||||||||||||| |||||||||||| | ||||| || |||||||| ||| | Sbjct: 185 gaggcggcgctgtgcgcggcgtgcgacgtggaggtgcacgcggcgaacaagctggccggg 244 Query: 240 aagcaccagaggctcccgctcgacgcgctcggcgccaagctcccgcgctgcgacatctgc 299 ||||||||| |||| ||||| || |||||| || | |||||||||||||||| | ||| Sbjct: 245 aagcaccagcggctgccgctggaggcgctctcggcgaggctcccgcgctgcgacgtgtgc 304 Query: 300 caggagaaggccgccttcatcttctgcgtcgaggacagggcgctcttctgccgcgactgc 359 ||||||||||| || |||||||||||||| |||||| | ||||||||||||||||||||| Sbjct: 305 caggagaaggcggcgttcatcttctgcgtggaggaccgcgcgctcttctgccgcgactgc 364 Query: 360 gacgagcccatccacgtcccaggcacgctccccgggaaccaccagcgctacctcgccacc 419 |||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||| Sbjct: 365 gacgagcccatccacgtccccggcacgctctccggcaaccaccagcgctacctcgccacc 424 Query: 420 ggcatccgcgtcggc 434 ||||||||||||||| Sbjct: 425 ggcatccgcgtcggc 439
>dbj|AB001885.1| Oryza sativa (japonica cultivar-group) mRNA for zinc finger protein, complete cds, clone:R1577 Length = 1197 Score = 347 bits (175), Expect = 3e-92 Identities = 280/315 (88%) Strand = Plus / Plus Query: 120 atgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcggac 179 |||||||||||||||||| |||||| | ||||||||| |||||||||||||||||||| Sbjct: 120 atgaagatccagtgcgacgcgtgcgagagcgcggcggcggcggtggtgtgctgcgcggac 179 Query: 180 gaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgccagc 239 |||||||||||||||||| |||||||||||| | ||||| || |||||||| ||| | Sbjct: 180 gaggcggcgctgtgcgcggcgtgcgacgtggaggtgcacgcggcgaacaagctggccggg 239 Query: 240 aagcaccagaggctcccgctcgacgcgctcggcgccaagctcccgcgctgcgacatctgc 299 ||||||||| |||| ||||| || |||||| || | |||||||||||||||| | ||| Sbjct: 240 aagcaccagcggctgccgctggaggcgctctcggcgaggctcccgcgctgcgacgtgtgc 299 Query: 300 caggagaaggccgccttcatcttctgcgtcgaggacagggcgctcttctgccgcgactgc 359 ||||||||||| || |||||||||||||| |||||| | ||||||||||||||||||||| Sbjct: 300 caggagaaggcggcgttcatcttctgcgtggaggaccgcgcgctcttctgccgcgactgc 359 Query: 360 gacgagcccatccacgtcccaggcacgctccccgggaaccaccagcgctacctcgccacc 419 |||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||| Sbjct: 360 gacgagcccatccacgtccccggcacgctctccggcaaccaccagcgctacctcgccacc 419 Query: 420 ggcatccgcgtcggc 434 ||||||||||||||| Sbjct: 420 ggcatccgcgtcggc 434
>emb|AL662938.3|OSJN00138 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ990528_30, complete sequence Length = 88547 Score = 246 bits (124), Expect = 7e-62 Identities = 174/190 (91%), Gaps = 3/190 (1%) Strand = Plus / Minus Query: 117 ggcatgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcg 176 ||||||| ||||||||||||| |||||| || |||||||||||||||||||||||||||| Sbjct: 79597 ggcatgaggatccagtgcgacgcgtgcgaggccgcggcggccacggtggtgtgctgcgcg 79538 Query: 177 gacgaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgcc 236 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 79537 gacgaggcggcgctgtgcgcgcgctgcgacgtcgagatccacgccgccaacaagctcgcc 79478 Query: 237 agcaagcaccagaggctcccgctcgacgc---gctcggcgccaagctcccgcgctgcgac 293 |||||||||||| | |||||||||||||| |||| |||| ||||||||||||||| Sbjct: 79477 agcaagcaccagcgcctcccgctcgacgccgcgctccccgccgccctcccgcgctgcgac 79418 Query: 294 atctgccagg 303 ||||||||| Sbjct: 79417 gtctgccagg 79408 Score = 194 bits (98), Expect = 2e-46 Identities = 125/134 (93%) Strand = Plus / Minus Query: 300 caggagaaggccgccttcatcttctgcgtcgaggacagggcgctcttctgccgcgactgc 359 ||||||||||| || |||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 79282 caggagaaggcggcgttcatcttctgcgtggaggacagggcgctcttctgccgggactgc 79223 Query: 360 gacgagcccatccacgtcccaggcacgctccccgggaaccaccagcgctacctcgccacc 419 |||||||||||||||||||| || |||||| |||| |||||||||||||||||| ||||| Sbjct: 79222 gacgagcccatccacgtcccggggacgctctccggcaaccaccagcgctacctcaccacc 79163 Query: 420 ggcatccgcgtcgg 433 |||||||||||||| Sbjct: 79162 ggcatccgcgtcgg 79149
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 246 bits (124), Expect = 7e-62 Identities = 174/190 (91%), Gaps = 3/190 (1%) Strand = Plus / Minus Query: 117 ggcatgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcg 176 ||||||| ||||||||||||| |||||| || |||||||||||||||||||||||||||| Sbjct: 24624452 ggcatgaggatccagtgcgacgcgtgcgaggccgcggcggccacggtggtgtgctgcgcg 24624393 Query: 177 gacgaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgcc 236 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 24624392 gacgaggcggcgctgtgcgcgcgctgcgacgtcgagatccacgccgccaacaagctcgcc 24624333 Query: 237 agcaagcaccagaggctcccgctcgacgc---gctcggcgccaagctcccgcgctgcgac 293 |||||||||||| | |||||||||||||| |||| |||| ||||||||||||||| Sbjct: 24624332 agcaagcaccagcgcctcccgctcgacgccgcgctccccgccgccctcccgcgctgcgac 24624273 Query: 294 atctgccagg 303 ||||||||| Sbjct: 24624272 gtctgccagg 24624263 Score = 194 bits (98), Expect = 2e-46 Identities = 125/134 (93%) Strand = Plus / Minus Query: 300 caggagaaggccgccttcatcttctgcgtcgaggacagggcgctcttctgccgcgactgc 359 ||||||||||| || |||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 24624137 caggagaaggcggcgttcatcttctgcgtggaggacagggcgctcttctgccgggactgc 24624078 Query: 360 gacgagcccatccacgtcccaggcacgctccccgggaaccaccagcgctacctcgccacc 419 |||||||||||||||||||| || |||||| |||| |||||||||||||||||| ||||| Sbjct: 24624077 gacgagcccatccacgtcccggggacgctctccggcaaccaccagcgctacctcaccacc 24624018 Query: 420 ggcatccgcgtcgg 433 |||||||||||||| Sbjct: 24624017 ggcatccgcgtcgg 24624004
>emb|AL512542.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0522A01, complete sequence Length = 97077 Score = 246 bits (124), Expect = 7e-62 Identities = 174/190 (91%), Gaps = 3/190 (1%) Strand = Plus / Minus Query: 117 ggcatgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcg 176 ||||||| ||||||||||||| |||||| || |||||||||||||||||||||||||||| Sbjct: 63246 ggcatgaggatccagtgcgacgcgtgcgaggccgcggcggccacggtggtgtgctgcgcg 63187 Query: 177 gacgaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgcc 236 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 63186 gacgaggcggcgctgtgcgcgcgctgcgacgtcgagatccacgccgccaacaagctcgcc 63127 Query: 237 agcaagcaccagaggctcccgctcgacgc---gctcggcgccaagctcccgcgctgcgac 293 |||||||||||| | |||||||||||||| |||| |||| ||||||||||||||| Sbjct: 63126 agcaagcaccagcgcctcccgctcgacgccgcgctctccgccgccctcccgcgctgcgac 63067 Query: 294 atctgccagg 303 ||||||||| Sbjct: 63066 gtctgccagg 63057 Score = 202 bits (102), Expect = 9e-49 Identities = 126/134 (94%) Strand = Plus / Minus Query: 300 caggagaaggccgccttcatcttctgcgtcgaggacagggcgctcttctgccgcgactgc 359 ||||||||||| || |||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 62928 caggagaaggcggcgttcatcttctgcgtggaggacagggcgctcttctgccgggactgc 62869 Query: 360 gacgagcccatccacgtcccaggcacgctccccgggaaccaccagcgctacctcgccacc 419 |||||||||||||||||||| || |||||| |||| |||||||||||||||||||||||| Sbjct: 62868 gacgagcccatccacgtcccggggacgctctccggcaaccaccagcgctacctcgccacc 62809 Query: 420 ggcatccgcgtcgg 433 |||||||||||||| Sbjct: 62808 ggcatccgcgtcgg 62795
>emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0091E11, complete sequence Length = 133856 Score = 246 bits (124), Expect = 7e-62 Identities = 174/190 (91%), Gaps = 3/190 (1%) Strand = Plus / Minus Query: 117 ggcatgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcg 176 ||||||| ||||||||||||| |||||| || |||||||||||||||||||||||||||| Sbjct: 13975 ggcatgaggatccagtgcgacgcgtgcgaggccgcggcggccacggtggtgtgctgcgcg 13916 Query: 177 gacgaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgcc 236 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 13915 gacgaggcggcgctgtgcgcgcgctgcgacgtcgagatccacgccgccaacaagctcgcc 13856 Query: 237 agcaagcaccagaggctcccgctcgacgc---gctcggcgccaagctcccgcgctgcgac 293 |||||||||||| | |||||||||||||| |||| |||| ||||||||||||||| Sbjct: 13855 agcaagcaccagcgcctcccgctcgacgccgcgctccccgccgccctcccgcgctgcgac 13796 Query: 294 atctgccagg 303 ||||||||| Sbjct: 13795 gtctgccagg 13786 Score = 194 bits (98), Expect = 2e-46 Identities = 125/134 (93%) Strand = Plus / Minus Query: 300 caggagaaggccgccttcatcttctgcgtcgaggacagggcgctcttctgccgcgactgc 359 ||||||||||| || |||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 13660 caggagaaggcggcgttcatcttctgcgtggaggacagggcgctcttctgccgggactgc 13601 Query: 360 gacgagcccatccacgtcccaggcacgctccccgggaaccaccagcgctacctcgccacc 419 |||||||||||||||||||| || |||||| |||| |||||||||||||||||| ||||| Sbjct: 13600 gacgagcccatccacgtcccggggacgctctccggcaaccaccagcgctacctcaccacc 13541 Query: 420 ggcatccgcgtcgg 433 |||||||||||||| Sbjct: 13540 ggcatccgcgtcgg 13527
>dbj|AK061664.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-E12, full insert sequence Length = 765 Score = 147 bits (74), Expect = 5e-32 Identities = 92/98 (93%) Strand = Plus / Plus Query: 336 agggcgctcttctgccgcgactgcgacgagcccatccacgtcccaggcacgctccccggg 395 ||||||||||||||||| |||||||||||||||||||||||||| || |||||| |||| Sbjct: 1 agggcgctcttctgccgggactgcgacgagcccatccacgtcccggggacgctctccggc 60 Query: 396 aaccaccagcgctacctcgccaccggcatccgcgtcgg 433 |||||||||||||||||| ||||||||||||||||||| Sbjct: 61 aaccaccagcgctacctcaccaccggcatccgcgtcgg 98
>ref|XM_550653.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1339 Score = 81.8 bits (41), Expect = 2e-12 Identities = 107/129 (82%) Strand = Plus / Plus Query: 120 atgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcggac 179 ||||||||||||||| || ||||||| | |||| ||| |||| |||||||||| ||| Sbjct: 63 atgaagatccagtgcaacgcgtgcggcgcggcggaggcgcgggtgctgtgctgcgccgac 122 Query: 180 gaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgccagc 239 ||||| ||||| ||| || ||||||| |||| | ||||||||||||||||||||| | Sbjct: 123 gaggcagcgctctgcacggcgtgcgacgaggaggtgcacgccgccaacaagctcgccggg 182 Query: 240 aagcaccag 248 ||||||||| Sbjct: 183 aagcaccag 191
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 81.8 bits (41), Expect = 2e-12 Identities = 107/129 (82%) Strand = Plus / Plus Query: 120 atgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcggac 179 ||||||||||||||| || ||||||| | |||| ||| |||| |||||||||| ||| Sbjct: 2694546 atgaagatccagtgcaacgcgtgcggcgcggcggaggcgcgggtgctgtgctgcgccgac 2694605 Query: 180 gaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgccagc 239 ||||| ||||| ||| || ||||||| |||| | ||||||||||||||||||||| | Sbjct: 2694606 gaggcagcgctctgcacggcgtgcgacgaggaggtgcacgccgccaacaagctcgccggg 2694665 Query: 240 aagcaccag 248 ||||||||| Sbjct: 2694666 aagcaccag 2694674 Score = 44.1 bits (22), Expect = 0.51 Identities = 46/54 (85%) Strand = Plus / Plus Query: 321 ttctgcgtcgaggacagggcgctcttctgccgcgactgcgacgagcccatccac 374 ||||||||||||||| | || || | ||| |||||||||||||||||||||| Sbjct: 29680610 ttctgcgtcgaggaccgcgccatcctgtgcgccgactgcgacgagcccatccac 29680663
>dbj|AP004806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710H01 Length = 187107 Score = 81.8 bits (41), Expect = 2e-12 Identities = 107/129 (82%) Strand = Plus / Plus Query: 120 atgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcggac 179 ||||||||||||||| || ||||||| | |||| ||| |||| |||||||||| ||| Sbjct: 149887 atgaagatccagtgcaacgcgtgcggcgcggcggaggcgcgggtgctgtgctgcgccgac 149946 Query: 180 gaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgccagc 239 ||||| ||||| ||| || ||||||| |||| | ||||||||||||||||||||| | Sbjct: 149947 gaggcagcgctctgcacggcgtgcgacgaggaggtgcacgccgccaacaagctcgccggg 150006 Query: 240 aagcaccag 248 ||||||||| Sbjct: 150007 aagcaccag 150015
>dbj|AP006554.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0529C07 Length = 174011 Score = 81.8 bits (41), Expect = 2e-12 Identities = 107/129 (82%) Strand = Plus / Plus Query: 120 atgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcggac 179 ||||||||||||||| || ||||||| | |||| ||| |||| |||||||||| ||| Sbjct: 106293 atgaagatccagtgcaacgcgtgcggcgcggcggaggcgcgggtgctgtgctgcgccgac 106352 Query: 180 gaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgccagc 239 ||||| ||||| ||| || ||||||| |||| | ||||||||||||||||||||| | Sbjct: 106353 gaggcagcgctctgcacggcgtgcgacgaggaggtgcacgccgccaacaagctcgccggg 106412 Query: 240 aagcaccag 248 ||||||||| Sbjct: 106413 aagcaccag 106421
>dbj|AK104083.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-D01, full insert sequence Length = 1339 Score = 81.8 bits (41), Expect = 2e-12 Identities = 107/129 (82%) Strand = Plus / Plus Query: 120 atgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcggac 179 ||||||||||||||| || ||||||| | |||| ||| |||| |||||||||| ||| Sbjct: 63 atgaagatccagtgcaacgcgtgcggcgcggcggaggcgcgggtgctgtgctgcgccgac 122 Query: 180 gaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgccagc 239 ||||| ||||| ||| || ||||||| |||| | ||||||||||||||||||||| | Sbjct: 123 gaggcagcgctctgcacggcgtgcgacgaggaggtgcacgccgccaacaagctcgccggg 182 Query: 240 aagcaccag 248 ||||||||| Sbjct: 183 aagcaccag 191
>dbj|AK072231.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001E21, full insert sequence Length = 1450 Score = 81.8 bits (41), Expect = 2e-12 Identities = 107/129 (82%) Strand = Plus / Plus Query: 120 atgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcggac 179 ||||||||||||||| || ||||||| | |||| ||| |||| |||||||||| ||| Sbjct: 96 atgaagatccagtgcaacgcgtgcggcgcggcggaggcgcgggtgctgtgctgcgccgac 155 Query: 180 gaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgccagc 239 ||||| ||||| ||| || ||||||| |||| | ||||||||||||||||||||| | Sbjct: 156 gaggcagcgctctgcacggcgtgcgacgaggaggtgcacgccgccaacaagctcgccggg 215 Query: 240 aagcaccag 248 ||||||||| Sbjct: 216 aagcaccag 224
>dbj|AB001886.1| Oryza sativa (japonica cultivar-group) mRNA for zinc finger protein, complete cds, clone:R2931 Length = 1418 Score = 81.8 bits (41), Expect = 2e-12 Identities = 107/129 (82%) Strand = Plus / Plus Query: 120 atgaagatccagtgcgactcgtgcggggtcgcggcggccacggtggtgtgctgcgcggac 179 ||||||||||||||| || ||||||| | |||| ||| |||| |||||||||| ||| Sbjct: 71 atgaagatccagtgcaacgcgtgcggcgcggcggaggcgcgggtgctgtgctgcgccgac 130 Query: 180 gaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaacaagctcgccagc 239 ||||| ||||| ||| || ||||||| |||| | ||||||||||||||||||||| | Sbjct: 131 gaggcagcgctctgcacggcgtgcgacgaggaggtgcacgccgccaacaagctcgccggg 190 Query: 240 aagcaccag 248 ||||||||| Sbjct: 191 aagcaccag 199
>gb|AC135920.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0015G13, complete sequence Length = 143966 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 168 tgctgcgcggacgaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaac 227 |||||||| |||||||| || |||||||||||||||||| || ||||||||||||||| Sbjct: 134852 tgctgcgccgacgaggccgccctgtgcgcgcgctgcgaccgcgacatccacgccgccaac 134911
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 168 tgctgcgcggacgaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaac 227 |||||||| |||||||| || |||||||||||||||||| || ||||||||||||||| Sbjct: 6433113 tgctgcgccgacgaggccgccctgtgcgcgcgctgcgaccgcgacatccacgccgccaac 6433172 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 181 aggcggcgctgtgcgcgcgctgcgacgtggag 212 ||||||||||| |||||||| ||||||||||| Sbjct: 28784766 aggcggcgctgggcgcgcgcggcgacgtggag 28784797 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ctgcgacatctgccaggaga 306 |||||||||||||||||||| Sbjct: 23342735 ctgcgacatctgccaggaga 23342716
>dbj|AK106865.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-C11, full insert sequence Length = 2055 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 168 tgctgcgcggacgaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaac 227 |||||||| |||||||| || |||||||||||||||||| || ||||||||||||||| Sbjct: 281 tgctgcgccgacgaggccgccctgtgcgcgcgctgcgaccgcgacatccacgccgccaac 340
>gb|AY330229.1| Triticum aestivum biotype Am4 wheat powder tolerance-related protein gene, complete cds Length = 917 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 340 cgctcttctgccgcgactgcgacgagcccatccacgtcc 378 |||||||||||||| |||||||||| |||||||||||| Sbjct: 355 cgctcttctgccgctactgcgacgactccatccacgtcc 317
>ref|NM_188312.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1074 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 319 tcttctgcgtcgaggacagggcgctcttctgccgcgactgcgacg 363 ||||||||||||||||| | || ||| ||||||||| |||||||| Sbjct: 215 tcttctgcgtcgaggaccgcgccctcctctgccgcgcctgcgacg 259 Score = 48.1 bits (24), Expect = 0.033 Identities = 66/80 (82%) Strand = Plus / Plus Query: 168 tgctgcgcggacgaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaac 227 |||||||| ||||| || || || ||||||||||||||| | | |||||||||||||| Sbjct: 49 tgctgcgccgacgacgccgccctctgcgcgcgctgcgacctccacgtccacgccgccaac 108 Query: 228 aagctcgccagcaagcacca 247 |||||| |||||||||| Sbjct: 109 cgcctcgccggcaagcacca 128
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 319 tcttctgcgtcgaggacagggcgctcttctgccgcgactgcgacg 363 ||||||||||||||||| | || ||| ||||||||| |||||||| Sbjct: 5639041 tcttctgcgtcgaggaccgcgccctcctctgccgcgcctgcgacg 5639085 Score = 48.1 bits (24), Expect = 0.033 Identities = 66/80 (82%) Strand = Plus / Plus Query: 168 tgctgcgcggacgaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaac 227 |||||||| ||||| || || || ||||||||||||||| | | |||||||||||||| Sbjct: 5638875 tgctgcgccgacgacgccgccctctgcgcgcgctgcgacctccacgtccacgccgccaac 5638934 Query: 228 aagctcgccagcaagcacca 247 |||||| |||||||||| Sbjct: 5638935 cgcctcgccggcaagcacca 5638954
>dbj|AP003105.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489A05 Length = 158815 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 319 tcttctgcgtcgaggacagggcgctcttctgccgcgactgcgacg 363 ||||||||||||||||| | || ||| ||||||||| |||||||| Sbjct: 104514 tcttctgcgtcgaggaccgcgccctcctctgccgcgcctgcgacg 104558 Score = 48.1 bits (24), Expect = 0.033 Identities = 66/80 (82%) Strand = Plus / Plus Query: 168 tgctgcgcggacgaggcggcgctgtgcgcgcgctgcgacgtggagatccacgccgccaac 227 |||||||| ||||| || || || ||||||||||||||| | | |||||||||||||| Sbjct: 104348 tgctgcgccgacgacgccgccctctgcgcgcgctgcgacctccacgtccacgccgccaac 104407 Query: 228 aagctcgccagcaagcacca 247 |||||| |||||||||| Sbjct: 104408 cgcctcgccggcaagcacca 104427
>dbj|AK067820.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013117D12, full insert sequence Length = 793 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 287 ctgcgacatctgccaggagaaggccgccttcatcttctgcgtcgaggac 335 |||||||||||||||||||||| | | || | |||||||| |||||||| Sbjct: 259 ctgcgacatctgccaggagaagacgggctacttcttctgcctcgaggac 307
>ref|XM_475953.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1329 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 181 aggcggcgctgtgcgcgcgctgcgacgtggag 212 ||||||||||| |||||||| ||||||||||| Sbjct: 899 aggcggcgctgggcgcgcgcggcgacgtggag 930
>gb|AC098573.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1651_G11, complete sequence Length = 112796 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 181 aggcggcgctgtgcgcgcgctgcgacgtggag 212 ||||||||||| |||||||| ||||||||||| Sbjct: 103479 aggcggcgctgggcgcgcgcggcgacgtggag 103510
>dbj|AK105906.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-G02, full insert sequence Length = 1482 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 181 aggcggcgctgtgcgcgcgctgcgacgtggag 212 ||||||||||| |||||||| ||||||||||| Sbjct: 933 aggcggcgctgggcgcgcgcggcgacgtggag 964
>dbj|AP004513.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT01O22, TM0043a, complete sequence Length = 54726 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 213 atccacgccgccaacaagctcgcc 236 |||||||||||||||||||||||| Sbjct: 29438 atccacgccgccaacaagctcgcc 29461
>gb|AC134929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0035N21, complete sequence Length = 128331 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Minus Query: 181 aggcggcgctgtgcgcgcgctgcgacgtggag 212 ||||||||||| |||||||| ||||||||||| Sbjct: 88701 aggcggcgctgggcgcgcgcggcgacgtggag 88670
>ref|NM_100484.3| Arabidopsis thaliana STO (SALT TOLERANCE); transcription factor/ zinc ion binding AT1G06040 (STO) transcript variant AT1G06040.1 mRNA, complete cds Length = 1227 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 201 tgcgacgtggagatccacgccgccaacaagctcgccagcaagcacca 247 |||||| | ||||| |||||||| ||||| ||||| ||||||||||| Sbjct: 313 tgcgacatcgagattcacgccgctaacaaactcgctagcaagcacca 359
>ref|NM_179267.2| Arabidopsis thaliana STO (SALT TOLERANCE); transcription factor/ zinc ion binding AT1G06040 (STO) transcript variant AT1G06040.2 mRNA, complete cds Length = 1309 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 201 tgcgacgtggagatccacgccgccaacaagctcgccagcaagcacca 247 |||||| | ||||| |||||||| ||||| ||||| ||||||||||| Sbjct: 313 tgcgacatcgagattcacgccgctaacaaactcgctagcaagcacca 359
>ref|XM_467034.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1199 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 282 ccgcgctgcgacatctgccaggagaag 308 |||| |||||||||||||||||||||| Sbjct: 358 ccgctctgcgacatctgccaggagaag 384
>gb|AY330230.1| Triticum aestivum biotype Brock wheat powder tolerance-related protein gene, complete cds Length = 917 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 340 cgctcttctgccgcgactgcgacgagcccatccacgtcc 378 |||||||||||||| || ||||||| |||||||||||| Sbjct: 355 cgctcttctgccgctaccgcgacgactccatccacgtcc 317
>gb|AY079377.1| Arabidopsis thaliana putative salt-tolerance protein (At1g06040) mRNA, complete cds Length = 778 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 201 tgcgacgtggagatccacgccgccaacaagctcgccagcaagcacca 247 |||||| | ||||| |||||||| ||||| ||||| ||||||||||| Sbjct: 82 tgcgacatcgagattcacgccgctaacaaactcgctagcaagcacca 128
>gb|AY045794.1| Arabidopsis thaliana putative salt-tolerance protein (At1g06040) mRNA, complete cds Length = 1116 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 201 tgcgacgtggagatccacgccgccaacaagctcgccagcaagcacca 247 |||||| | ||||| |||||||| ||||| ||||| ||||||||||| Sbjct: 272 tgcgacatcgagattcacgccgctaacaaactcgctagcaagcacca 318
>emb|X95572.1|ATSTO A.thaliana mRNA for salt-tolerance protein Length = 1033 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 201 tgcgacgtggagatccacgccgccaacaagctcgccagcaagcacca 247 |||||| | ||||| |||||||| ||||| ||||| ||||||||||| Sbjct: 203 tgcgacatcgagattcacgccgctaacaaactcgctagcaagcacca 249
>gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, genomic sequence Length = 103866 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 340 cgctcttctgccgcgactgcgacgagcccatccacgtcc 378 |||||||||||||| |||||||||| ||||||| |||| Sbjct: 33755 cgctcttctgccgctactgcgacgactccatccatgtcc 33717
>emb|BX817822.1|CNS0AEFO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL43ZF03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 978 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 201 tgcgacgtggagatccacgccgccaacaagctcgccagcaagcacca 247 |||||| | ||||| |||||||| ||||| ||||| ||||||||||| Sbjct: 105 tgcgacatcgagattcacgccgctaacaaactcgctagcaagcacca 151
>emb|BX816034.1|CNS0AD7C Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH24ZA08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1041 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 201 tgcgacgtggagatccacgccgccaacaagctcgccagcaagcacca 247 |||||| | ||||| |||||||| ||||| ||||| ||||||||||| Sbjct: 212 tgcgacatcgagattcacgccgctaacaaactcgctagcaagcacca 258
>emb|BX815485.1|CNS0ACZA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS65ZG02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1076 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 201 tgcgacgtggagatccacgccgccaacaagctcgccagcaagcacca 247 |||||| | ||||| |||||||| ||||| ||||| ||||||||||| Sbjct: 262 tgcgacatcgagattcacgccgctaacaaactcgctagcaagcacca 308
>emb|BX814784.1|CNS0AAR4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB94ZA09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1080 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 201 tgcgacgtggagatccacgccgccaacaagctcgccagcaagcacca 247 |||||| | ||||| |||||||| ||||| ||||| ||||||||||| Sbjct: 289 tgcgacatcgagattcacgccgctaacaaactcgctagcaagcacca 335
>gb|AC024174.2|T21E18 Sequence of BAC T21E18 from Arabidopsis thaliana chromosome 1, complete sequence Length = 74316 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 201 tgcgacgtggagatccacgccgccaacaagctcgccagcaagcacca 247 |||||| | ||||| |||||||| ||||| ||||| ||||||||||| Sbjct: 28725 tgcgacatcgagattcacgccgctaacaaactcgctagcaagcacca 28679
>dbj|AK071507.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023090D24, full insert sequence Length = 1200 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 282 ccgcgctgcgacatctgccaggagaag 308 |||| |||||||||||||||||||||| Sbjct: 358 ccgctctgcgacatctgccaggagaag 384
>ref|NM_128695.2| Arabidopsis thaliana STH; transcription factor/ zinc ion binding AT2G31380 (STH) mRNA, complete cds Length = 1369 Score = 44.1 bits (22), Expect = 0.51 Identities = 46/54 (85%) Strand = Plus / Plus Query: 287 ctgcgacatctgccaggagaaggccgccttcatcttctgcgtcgaggacagggc 340 |||||||||||||| |||||||| || ||||| ||||| || ||||| ||||| Sbjct: 365 ctgcgacatctgccttgagaaggcagctttcatattctgtgtagaggatagggc 418
>gb|BT000798.1| Arabidopsis thaliana At2g31380 mRNA sequence Length = 1083 Score = 44.1 bits (22), Expect = 0.51 Identities = 46/54 (85%) Strand = Plus / Plus Query: 287 ctgcgacatctgccaggagaaggccgccttcatcttctgcgtcgaggacagggc 340 |||||||||||||| |||||||| || ||||| ||||| || ||||| ||||| Sbjct: 352 ctgcgacatctgccttgagaaggcagctttcatattctgtgtagaggatagggc 405
>gb|AY063097.1| Arabidopsis thaliana putative CONSTANS B-box zinc finger protein (At2g31380) mRNA, complete cds Length = 747 Score = 44.1 bits (22), Expect = 0.51 Identities = 46/54 (85%) Strand = Plus / Plus Query: 287 ctgcgacatctgccaggagaaggccgccttcatcttctgcgtcgaggacagggc 340 |||||||||||||| |||||||| || ||||| ||||| || ||||| ||||| Sbjct: 168 ctgcgacatctgccttgagaaggcagctttcatattctgtgtagaggatagggc 221
>gb|AF370311.1| Arabidopsis thaliana putative CONSTANS B-box zinc finger protein (At2g31380) mRNA, complete cds Length = 990 Score = 44.1 bits (22), Expect = 0.51 Identities = 46/54 (85%) Strand = Plus / Plus Query: 287 ctgcgacatctgccaggagaaggccgccttcatcttctgcgtcgaggacagggc 340 |||||||||||||| |||||||| || ||||| ||||| || ||||| ||||| Sbjct: 365 ctgcgacatctgccttgagaaggcagctttcatattctgtgtagaggatagggc 418
>emb|AJ585192.1| Streptomyces resistomycificus remA-R gene cluster Length = 16662 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 252 ctcccgctcgacgcgctcggcg 273 |||||||||||||||||||||| Sbjct: 12743 ctcccgctcgacgcgctcggcg 12764
>gb|AF325077.1|AF325077 Arabidopsis thaliana putative CONSTANS-like B-box zinc finger protein (At2g31380) mRNA, complete cds Length = 717 Score = 44.1 bits (22), Expect = 0.51 Identities = 46/54 (85%) Strand = Plus / Plus Query: 287 ctgcgacatctgccaggagaaggccgccttcatcttctgcgtcgaggacagggc 340 |||||||||||||| |||||||| || ||||| ||||| || ||||| ||||| Sbjct: 168 ctgcgacatctgccttgagaaggcagctttcatattctgtgtagaggatagggc 221
>gb|AF323666.1|AF323666 Arabidopsis thaliana B-box zinc finger protein STH mRNA, complete cds Length = 965 Score = 44.1 bits (22), Expect = 0.51 Identities = 46/54 (85%) Strand = Plus / Plus Query: 287 ctgcgacatctgccaggagaaggccgccttcatcttctgcgtcgaggacagggc 340 |||||||||||||| |||||||| || ||||| ||||| || ||||| ||||| Sbjct: 248 ctgcgacatctgccttgagaaggcagctttcatattctgtgtagaggatagggc 301
>dbj|AP005463.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0712G01 Length = 87056 Score = 44.1 bits (22), Expect = 0.51 Identities = 46/54 (85%) Strand = Plus / Plus Query: 321 ttctgcgtcgaggacagggcgctcttctgccgcgactgcgacgagcccatccac 374 ||||||||||||||| | || || | ||| |||||||||||||||||||||| Sbjct: 53724 ttctgcgtcgaggaccgcgccatcctgtgcgccgactgcgacgagcccatccac 53777
>dbj|AP004329.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1663_H12 Length = 125422 Score = 44.1 bits (22), Expect = 0.51 Identities = 46/54 (85%) Strand = Plus / Plus Query: 321 ttctgcgtcgaggacagggcgctcttctgccgcgactgcgacgagcccatccac 374 ||||||||||||||| | || || | ||| |||||||||||||||||||||| Sbjct: 124195 ttctgcgtcgaggaccgcgccatcctgtgcgccgactgcgacgagcccatccac 124248
>dbj|AK105957.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-D08, full insert sequence Length = 1380 Score = 44.1 bits (22), Expect = 0.51 Identities = 46/54 (85%) Strand = Plus / Plus Query: 321 ttctgcgtcgaggacagggcgctcttctgccgcgactgcgacgagcccatccac 374 ||||||||||||||| | || || | ||| |||||||||||||||||||||| Sbjct: 409 ttctgcgtcgaggaccgcgccatcctgtgcgccgactgcgacgagcccatccac 462
>gb|AF052585.1|AF052585 Malus domestica cultivar Fuji CONSTANS-like protein 2 (Col2) mRNA, complete cds Length = 1233 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 211 agatccacgccgccaacaagctcgcc 236 |||||||||| ||||||||||||||| Sbjct: 149 agatccacgcggccaacaagctcgcc 174
>dbj|AB001884.1| Oryza sativa (japonica cultivar-group) mRNA for zinc finger protein, complete cds, clone:R1479 Length = 1223 Score = 44.1 bits (22), Expect = 0.51 Identities = 46/54 (85%) Strand = Plus / Plus Query: 321 ttctgcgtcgaggacagggcgctcttctgccgcgactgcgacgagcccatccac 374 ||||||||||||||| | || || | ||| |||||||||||||||||||||| Sbjct: 252 ttctgcgtcgaggaccgcgccatcctgtgcgccgactgcgacgagcccatccac 305
>gb|DQ234265.1| Glycine max salt-tolerance protein mRNA, complete cds Length = 1353 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 aacaagctcgccagcaagcaccagaggct 253 |||||||| || ||||||||||||||||| Sbjct: 378 aacaagcttgcaagcaagcaccagaggct 406
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 250 ggctcccgctcgacgcgctcggcgc 274 ||||| ||||||||||||||||||| Sbjct: 1997289 ggctcgcgctcgacgcgctcggcgc 1997265 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 cgctcgacgcgctcggcgcc 275 |||||||||||||||||||| Sbjct: 2279922 cgctcgacgcgctcggcgcc 2279941
>gb|AC161371.4| Mus musculus BAC clone RP23-402N3 from chromosome 9, complete sequence Length = 203708 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 106 agaaaagcagaggcatgaagatcca 130 ||||| ||||||||||||||||||| Sbjct: 195178 agaaatgcagaggcatgaagatcca 195202
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 250 ggctcccgctcgacgcgctcggcgc 274 ||||| ||||||||||||||||||| Sbjct: 2379478 ggctcgcgctcgacgcgctcggcgc 2379502 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 cgctcgacgcgctcggcgcc 275 |||||||||||||||||||| Sbjct: 2094785 cgctcgacgcgctcggcgcc 2094766
>gb|AC163712.3| Gallus gallus BAC clone CH261-29M9 from chromosome ul, complete sequence Length = 236367 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 520 accaccagccgccggcccagcccgccgcc 548 ||||||| || |||||||||||||||||| Sbjct: 118496 accaccaccccccggcccagcccgccgcc 118468
>gb|AE005809.1| Caulobacter crescentus CB15 section 135 of 359 of the complete genome Length = 10696 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 481 acgacgccgaccaccacgccc 501 ||||||||||||||||||||| Sbjct: 593 acgacgccgaccaccacgccc 573
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 528 ccgccggcccagcccgccgcc 548 ||||||||||||||||||||| Sbjct: 4950785 ccgccggcccagcccgccgcc 4950765
>dbj|AK132453.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732419E23 product:unclassifiable, full insert sequence Length = 2993 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 gcgacatctgccaggagaagg 309 ||||||||||||||||||||| Sbjct: 2600 gcgacatctgccaggagaagg 2620
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 143 cggggtcgcggcggccacggt 163 ||||||||||||||||||||| Sbjct: 1276236 cggggtcgcggcggccacggt 1276256
>dbj|AK069785.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031H02, full insert sequence Length = 1705 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 184 cggcgctgtgcgcgcgctgcgacgtggag 212 |||||||| |||||||| ||||||||||| Sbjct: 972 cggcgctgggcgcgcgcggcgacgtggag 1000
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 516 tgcgaccaccagccgccggcc 536 ||||||||||||||||||||| Sbjct: 2544468 tgcgaccaccagccgccggcc 2544488
>gb|AC123702.11| Mus musculus chromosome 19, clone RP23-341D12, complete sequence Length = 154959 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 289 gcgacatctgccaggagaagg 309 ||||||||||||||||||||| Sbjct: 36698 gcgacatctgccaggagaagg 36678
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 426 cgcgtcggcctcggccccgtc 446 ||||||||||||||||||||| Sbjct: 1806749 cgcgtcggcctcggccccgtc 1806729
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 tctccacctgcgccgccggg 464 |||||||||||||||||||| Sbjct: 1365733 tctccacctgcgccgccggg 1365752
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 cgctcgacgcgctcggcgcc 275 |||||||||||||||||||| Sbjct: 1225470 cgctcgacgcgctcggcgcc 1225451
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 353 cgactgcgacgagcccatccacgt 376 ||||||||||||| |||||||||| Sbjct: 2860184 cgactgcgacgagaccatccacgt 2860207
>gb|AC144737.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0018K15, complete sequence Length = 168519 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 ctgcgacatctgccaggaga 306 |||||||||||||||||||| Sbjct: 28271 ctgcgacatctgccaggaga 28252
>gb|AC145378.2| Pan troglodytes BAC clone RP43-56P12 from 7, complete sequence Length = 186835 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 gaaagcaagaaaagcagagg 118 |||||||||||||||||||| Sbjct: 63199 gaaagcaagaaaagcagagg 63180
>emb|AL591792.1|SME591792 Sinorhizobium meliloti 1021 complete chromosome; segment 11/12 Length = 333800 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 255 ccgctcgacgcgctcggcgccaag 278 ||||||||||||||||||| |||| Sbjct: 205277 ccgctcgacgcgctcggcgtcaag 205300
>ref|XM_547850.2| PREDICTED: Canis familiaris similar to sphingosine-1-phosphatase (LOC490728), mRNA Length = 1440 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 gaccaccagccgccggccca 538 |||||||||||||||||||| Sbjct: 507 gaccaccagccgccggccca 488
>gb|AC003073.2| Homo sapiens PAC clone RP4-531J23 from 7, complete sequence Length = 26347 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 gaaagcaagaaaagcagagg 118 |||||||||||||||||||| Sbjct: 17712 gaaagcaagaaaagcagagg 17693
>gb|AC101883.6| Mus musculus chromosome 1, clone RP23-402F17, complete sequence Length = 191721 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 gagaaagcaagaaaagcaga 116 |||||||||||||||||||| Sbjct: 143537 gagaaagcaagaaaagcaga 143518
>gb|AC145783.1| Pan troglodytes BAC clone RP43-27O9 from 7, complete sequence Length = 175651 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 gaaagcaagaaaagcagagg 118 |||||||||||||||||||| Sbjct: 32043 gaaagcaagaaaagcagagg 32024
>gb|AY330485.1| Saccharopolyspora erythraea amino acid permease gene, partial cds; transport protein, helix-turn-helix regulator (pkeRI), P450 monooxygenase (pkePI), P450 monooxygenase (pkePII), P450 monooxygenase (pkePIII), type I PKS (pkeAI), type I PKS (pkeAII), and type I PKS (pkeAIII) genes, complete cds; pkeAIV gene, complete sequence; type I PKS, monooxygenases, transporter, ketoacyl-ACP synthase (typeII), acyl carrier protien, amino transferase, and DNA-binding protein genes, complete cds; and unknown genes Length = 68451 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 ccgctcgacgcgctcggcgc 274 |||||||||||||||||||| Sbjct: 52593 ccgctcgacgcgctcggcgc 52612
>emb|AL954342.10| Human DNA sequence from clone RP11-343L13 on chromosome 1 Contains part of the KCNN3 gene for potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3, complete sequence Length = 28342 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 cccgcctccctttcttcctc 41 |||||||||||||||||||| Sbjct: 23185 cccgcctccctttcttcctc 23166
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 451 cctgcgccgccggggaccacggcg 474 ||||||||||||| |||||||||| Sbjct: 1504771 cctgcgccgccggtgaccacggcg 1504748
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 gcacgctccccgggaaccaccagc 405 |||| ||||||||||||||||||| Sbjct: 2117779 gcaccctccccgggaaccaccagc 2117756
>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16 Length = 345012 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 421 gcatccgcgtcggcctcggccccg 444 ||||| |||||||||||||||||| Sbjct: 328960 gcatcagcgtcggcctcggccccg 328983
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 353 cgactgcgacgagcccatccacgt 376 ||||||||||||| |||||||||| Sbjct: 1038667 cgactgcgacgagaccatccacgt 1038690
>emb|BX569689.1| Synechococcus sp. WH8102 complete genome; segment 1/7 Length = 348764 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 gctgcgacatctgccaggag 305 |||||||||||||||||||| Sbjct: 9554 gctgcgacatctgccaggag 9535
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 411 ctcgccaccggcatccgcgtcggc 434 |||||| ||||||||||||||||| Sbjct: 1511597 ctcgccgccggcatccgcgtcggc 1511620
>emb|CR749769.6| Zebrafish DNA sequence from clone DKEY-215J3 in linkage group 17, complete sequence Length = 170993 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 cccatccacgtcccaggcacgctc 389 ||||| |||||||||||||||||| Sbjct: 3999 cccattcacgtcccaggcacgctc 4022
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 caccggcatccgcgtcggcc 435 |||||||||||||||||||| Sbjct: 3016914 caccggcatccgcgtcggcc 3016933
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 454 gcgccgccggggaccacggcgcaa 477 |||||||||| ||||||||||||| Sbjct: 4060735 gcgccgccggtgaccacggcgcaa 4060712
>dbj|AB222675.1| Uncultured bacterium gene for chitinase, partial cds, clone:RCC92 Length = 400 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gctcgacgcgctcggcgcca 276 |||||||||||||||||||| Sbjct: 85 gctcgacgcgctcggcgcca 104
>gb|AE011675.1| Xanthomonas axonopodis pv. citri str. 306, section 53 of 469 of the complete genome Length = 10189 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 cgcgctcggcgccaagctcc 282 |||||||||||||||||||| Sbjct: 2262 cgcgctcggcgccaagctcc 2243
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 565 cctcgccgccgcagttcctg 584 |||||||||||||||||||| Sbjct: 3896523 cctcgccgccgcagttcctg 3896504
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 409 acctcgccaccggcatccgcgtcg 432 |||||||||||||| ||||||||| Sbjct: 4353123 acctcgccaccggcgtccgcgtcg 4353100
>gb|AF336797.2|AF336797 Homo sapiens small-conductance calcium-activated potassium channel (KCNN3) gene, complete cds Length = 163217 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 cccgcctccctttcttcctc 41 |||||||||||||||||||| Sbjct: 89917 cccgcctccctttcttcctc 89936
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 353 cgactgcgacgagcccatccacgt 376 ||||||||||||| |||||||||| Sbjct: 632471 cgactgcgacgagaccatccacgt 632494
>gb|AC154310.2| Mus musculus BAC clone RP23-358E14 from chromosome 13, complete sequence Length = 176209 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 gagaaagcaagaaaagcaga 116 |||||||||||||||||||| Sbjct: 85794 gagaaagcaagaaaagcaga 85813
>gb|AY830922.1| Pisum sativum CONSTANS-LIKE b (COLb) mRNA, complete cds Length = 1275 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 213 atccacgccgccaacaagctcgcc 236 ||||||||||||||||| |||||| Sbjct: 158 atccacgccgccaacaaactcgcc 181
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 cacgacgccgaccaccacgc 499 |||||||||||||||||||| Sbjct: 3000206 cacgacgccgaccaccacgc 3000187
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 cgccaacaagctcgccagca 240 |||||||||||||||||||| Sbjct: 4466425 cgccaacaagctcgccagca 4466444
>emb|AJ250131.1|ASP250131 Nostoc sp. PCC 7120 hepB gene Length = 1506 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 cgccaacaagctcgccagca 240 |||||||||||||||||||| Sbjct: 923 cgccaacaagctcgccagca 942
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 cggcatccgcgtcggcctcg 438 |||||||||||||||||||| Sbjct: 1244825 cggcatccgcgtcggcctcg 1244806
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 cgctcgacgcgctcggcgcc 275 |||||||||||||||||||| Sbjct: 2748569 cgctcgacgcgctcggcgcc 2748550
>gb|AC174763.1| Gasterosteus aculeatus clone VMRC28-119C03, complete sequence Length = 138567 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 agaaagcaagaaaagcagag 117 |||||||||||||||||||| Sbjct: 39889 agaaagcaagaaaagcagag 39908
>emb|CT009728.8| Mouse DNA sequence from clone RP23-57I20 on chromosome 13, complete sequence Length = 202072 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 gagaaagcaagaaaagcaga 116 |||||||||||||||||||| Sbjct: 12109 gagaaagcaagaaaagcaga 12090
>dbj|AP003071.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-554A11, complete sequence Length = 191898 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 aagctcgccagcaagcacca 247 |||||||||||||||||||| Sbjct: 90260 aagctcgccagcaagcacca 90241
>gb|U68035.1|ASU68035 Anabaena sp. strain PCC 7120 HepB (hepB) gene, complete cds Length = 2256 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 cgccaacaagctcgccagca 240 |||||||||||||||||||| Sbjct: 1538 cgccaacaagctcgccagca 1557
>dbj|D14520.1|HUMBTEB2 Human mRNA for GC-Box binding protein BTEB2, complete cds Length = 1301 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 530 gccggcccagcccgccgcca 549 |||||||||||||||||||| Sbjct: 53 gccggcccagcccgccgcca 72 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,410,908 Number of Sequences: 3902068 Number of extensions: 4410908 Number of successful extensions: 109117 Number of sequences better than 10.0: 115 Number of HSP's better than 10.0 without gapping: 118 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 104405 Number of HSP's gapped (non-prelim): 4683 length of query: 585 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 562 effective length of database: 17,143,297,704 effective search space: 9634533309648 effective search space used: 9634533309648 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
