ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart56b07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC099404.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0019D02, complete sequence Length = 154692 Score = 190 bits (96), Expect = 4e-45 Identities = 194/224 (86%), Gaps = 2/224 (0%) Strand = Plus / Plus Query: 163 ctgcgagagcgaggagttcccggccggcaggagctacgcgacgtgcgcggacctcccgac 222 ||||||| ||||| |||||||||| || |||||||||||||||||||| ||||| ||| | Sbjct: 150049 ctgcgagggcgagaagttcccggcggggaggagctacgcgacgtgcgccgacctgccggc 150108 Query: 223 cctcggcgcctcgctgcactggacctacgacgcggcgacctcgtcgctttccctggcgtt 282 |||||||| ||||||||||||||||||||| | | ||| |||| || |||||||| Sbjct: 150109 gctcggcgcgacgctgcactggacctacgacggcaaggcgtcgacgctgtcgctggcgtt 150168 Query: 283 cgcggccaagccgcccg-gcgcgagcggcgccggctgggtggcctgggggatcaacccca 341 || |||||||||||| | | ||| |||||| ||| |||||| | |||| ||||||||||| Sbjct: 150169 cgtggccaagccgccggcgagcg-gcggcggcgggtgggtgtcgtgggcgatcaacccca 150227 Query: 342 ccggcgacggcatgaagggcgcgcagacgctcgtcgccttcaag 385 |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 150228 ccggcgacggcatgaagggcgcgcaggcgctcgtcgccttcaag 150271 Score = 89.7 bits (45), Expect = 1e-14 Identities = 146/179 (81%), Gaps = 3/179 (1%) Strand = Plus / Plus Query: 398 tacgtcgtgaacacgtacaatctcaccgggtaccgcccgctcagcgcgtggtccacgccg 457 |||||||||||||||||||| ||||||||||| ||| || ||| ||| ||||| Sbjct: 150293 tacgtcgtgaacacgtacaacgtcaccgggtacaagccgttccccgccgcgtcaacgccc 150352 Query: 458 atcgcgttcgaggccgccgagctcgccgccgacgagggcgccg---acgggaaggtgcgg 514 ||||||||| | ||| |||| ||||||||||||||| |||||| ||| ||| ||||| Sbjct: 150353 atcgcgttcaacgccaccgacctcgccgccgacgagagcgccgccaccggcaagctgcgg 150412 Query: 515 ctctacggcacgctgcagctgcccaagggcatggaagctgtgaaccacatctggcaggt 573 |||||||||| |||||||||||| || ||||| | |||||||||||||||||||| Sbjct: 150413 ctctacggcaagctgcagctgccgcgcgggatggagacggtgaaccacatctggcaggt 150471
>gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBb0004A05, complete sequence Length = 157913 Score = 190 bits (96), Expect = 4e-45 Identities = 194/224 (86%), Gaps = 2/224 (0%) Strand = Plus / Plus Query: 163 ctgcgagagcgaggagttcccggccggcaggagctacgcgacgtgcgcggacctcccgac 222 ||||||| ||||| |||||||||| || |||||||||||||||||||| ||||| ||| | Sbjct: 34723 ctgcgagggcgagaagttcccggcggggaggagctacgcgacgtgcgccgacctgccggc 34782 Query: 223 cctcggcgcctcgctgcactggacctacgacgcggcgacctcgtcgctttccctggcgtt 282 |||||||| ||||||||||||||||||||| | | ||| |||| || |||||||| Sbjct: 34783 gctcggcgcgacgctgcactggacctacgacggcaaggcgtcgacgctgtcgctggcgtt 34842 Query: 283 cgcggccaagccgcccg-gcgcgagcggcgccggctgggtggcctgggggatcaacccca 341 || |||||||||||| | | ||| |||||| ||| |||||| | |||| ||||||||||| Sbjct: 34843 cgtggccaagccgccggcgagcg-gcggcggcgggtgggtgtcgtgggcgatcaacccca 34901 Query: 342 ccggcgacggcatgaagggcgcgcagacgctcgtcgccttcaag 385 |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 34902 ccggcgacggcatgaagggcgcgcaggcgctcgtcgccttcaag 34945 Score = 89.7 bits (45), Expect = 1e-14 Identities = 146/179 (81%), Gaps = 3/179 (1%) Strand = Plus / Plus Query: 398 tacgtcgtgaacacgtacaatctcaccgggtaccgcccgctcagcgcgtggtccacgccg 457 |||||||||||||||||||| ||||||||||| ||| || ||| ||| ||||| Sbjct: 34967 tacgtcgtgaacacgtacaacgtcaccgggtacaagccgttccccgccgcgtcaacgccc 35026 Query: 458 atcgcgttcgaggccgccgagctcgccgccgacgagggcgccg---acgggaaggtgcgg 514 ||||||||| | ||| |||| ||||||||||||||| |||||| ||| ||| ||||| Sbjct: 35027 atcgcgttcaacgccaccgacctcgccgccgacgagagcgccgccaccggcaagctgcgg 35086 Query: 515 ctctacggcacgctgcagctgcccaagggcatggaagctgtgaaccacatctggcaggt 573 |||||||||| |||||||||||| || ||||| | |||||||||||||||||||| Sbjct: 35087 ctctacggcaagctgcagctgccgcgcgggatggagacggtgaaccacatctggcaggt 35145 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 472 cgccgagctcgccgccgacgagggcg 497 |||||||||||||| ||||||||||| Sbjct: 104447 cgccgagctcgccggcgacgagggcg 104422
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 190 bits (96), Expect = 4e-45 Identities = 194/224 (86%), Gaps = 2/224 (0%) Strand = Plus / Plus Query: 163 ctgcgagagcgaggagttcccggccggcaggagctacgcgacgtgcgcggacctcccgac 222 ||||||| ||||| |||||||||| || |||||||||||||||||||| ||||| ||| | Sbjct: 19104764 ctgcgagggcgagaagttcccggcggggaggagctacgcgacgtgcgccgacctgccggc 19104823 Query: 223 cctcggcgcctcgctgcactggacctacgacgcggcgacctcgtcgctttccctggcgtt 282 |||||||| ||||||||||||||||||||| | | ||| |||| || |||||||| Sbjct: 19104824 gctcggcgcgacgctgcactggacctacgacggcaaggcgtcgacgctgtcgctggcgtt 19104883 Query: 283 cgcggccaagccgcccg-gcgcgagcggcgccggctgggtggcctgggggatcaacccca 341 || |||||||||||| | | ||| |||||| ||| |||||| | |||| ||||||||||| Sbjct: 19104884 cgtggccaagccgccggcgagcg-gcggcggcgggtgggtgtcgtgggcgatcaacccca 19104942 Query: 342 ccggcgacggcatgaagggcgcgcagacgctcgtcgccttcaag 385 |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 19104943 ccggcgacggcatgaagggcgcgcaggcgctcgtcgccttcaag 19104986 Score = 89.7 bits (45), Expect = 1e-14 Identities = 146/179 (81%), Gaps = 3/179 (1%) Strand = Plus / Plus Query: 398 tacgtcgtgaacacgtacaatctcaccgggtaccgcccgctcagcgcgtggtccacgccg 457 |||||||||||||||||||| ||||||||||| ||| || ||| ||| ||||| Sbjct: 19105008 tacgtcgtgaacacgtacaacgtcaccgggtacaagccgttccccgccgcgtcaacgccc 19105067 Query: 458 atcgcgttcgaggccgccgagctcgccgccgacgagggcgccg---acgggaaggtgcgg 514 ||||||||| | ||| |||| ||||||||||||||| |||||| ||| ||| ||||| Sbjct: 19105068 atcgcgttcaacgccaccgacctcgccgccgacgagagcgccgccaccggcaagctgcgg 19105127 Query: 515 ctctacggcacgctgcagctgcccaagggcatggaagctgtgaaccacatctggcaggt 573 |||||||||| |||||||||||| || ||||| | |||||||||||||||||||| Sbjct: 19105128 ctctacggcaagctgcagctgccgcgcgggatggagacggtgaaccacatctggcaggt 19105186 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 472 cgccgagctcgccgccgacgagggcg 497 |||||||||||||| ||||||||||| Sbjct: 19173429 cgccgagctcgccggcgacgagggcg 19173404
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 81.8 bits (41), Expect = 2e-12 Identities = 109/131 (83%), Gaps = 3/131 (2%) Strand = Plus / Minus Query: 452 acgccgatcgcgttcgaggccgccgagctcgccgccgacgagggcgccgac---gggaag 508 ||||| ||||||||| | ||| |||| ||||||||||||||| || || | |||||| Sbjct: 15360629 acgcccatcgcgttcaacgccaccgacctcgccgccgacgagagcacctccaccgggaag 15360570 Query: 509 gtgcggctctacggcacgctgcagctgcccaagggcatggaagctgtgaaccacatctgg 568 ||| |||||||||||| |||||||||||| | || ||||| | ||||||||||||||| Sbjct: 15360569 gtgtggctctacggcaagctgcagctgcctcacgggatggagacggtgaaccacatctgg 15360510 Query: 569 caggtagggtc 579 ||||| ||||| Sbjct: 15360509 caggtcgggtc 15360499 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 317 tgggtggcctgggggatcaaccccaccggcgacggcatgaagggcgc 363 |||||| | |||| |||||||||||||||||||| |||||||||||| Sbjct: 15360730 tgggtgtcgtgggcgatcaaccccaccggcgacgacatgaagggcgc 15360684 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 465 tcgaggccgccgagctcgccgccg 488 ||||| |||||||||||||||||| Sbjct: 26648188 tcgagcccgccgagctcgccgccg 26648211
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 81.8 bits (41), Expect = 2e-12 Identities = 109/131 (83%), Gaps = 3/131 (2%) Strand = Plus / Minus Query: 452 acgccgatcgcgttcgaggccgccgagctcgccgccgacgagggcgccgac---gggaag 508 ||||| ||||||||| | ||| |||| ||||||||||||||| || || | |||||| Sbjct: 15314912 acgcccatcgcgttcaacgccaccgacctcgccgccgacgagagcacctccaccgggaag 15314853 Query: 509 gtgcggctctacggcacgctgcagctgcccaagggcatggaagctgtgaaccacatctgg 568 ||| |||||||||||| |||||||||||| | || ||||| | ||||||||||||||| Sbjct: 15314852 gtgtggctctacggcaagctgcagctgcctcacgggatggagacggtgaaccacatctgg 15314793 Query: 569 caggtagggtc 579 ||||| ||||| Sbjct: 15314792 caggtcgggtc 15314782 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 317 tgggtggcctgggggatcaaccccaccggcgacggcatgaagggcgc 363 |||||| | |||| |||||||||||||||||||| |||||||||||| Sbjct: 15315013 tgggtgtcgtgggcgatcaaccccaccggcgacgacatgaagggcgc 15314967 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 465 tcgaggccgccgagctcgccgccg 488 ||||| |||||||||||||||||| Sbjct: 26576357 tcgagcccgccgagctcgccgccg 26576380
>emb|AL713928.3|CNS07YP5 Oryza sativa chromosome 12, . BAC OSJNBa0036B12 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151541 Score = 81.8 bits (41), Expect = 2e-12 Identities = 109/131 (83%), Gaps = 3/131 (2%) Strand = Plus / Minus Query: 452 acgccgatcgcgttcgaggccgccgagctcgccgccgacgagggcgccgac---gggaag 508 ||||| ||||||||| | ||| |||| ||||||||||||||| || || | |||||| Sbjct: 136022 acgcccatcgcgttcaacgccaccgacctcgccgccgacgagagcacctccaccgggaag 135963 Query: 509 gtgcggctctacggcacgctgcagctgcccaagggcatggaagctgtgaaccacatctgg 568 ||| |||||||||||| |||||||||||| | || ||||| | ||||||||||||||| Sbjct: 135962 gtgtggctctacggcaagctgcagctgcctcacgggatggagacggtgaaccacatctgg 135903 Query: 569 caggtagggtc 579 ||||| ||||| Sbjct: 135902 caggtcgggtc 135892 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 317 tgggtggcctgggggatcaaccccaccggcgacggcatgaagggcgc 363 |||||| | |||| |||||||||||||||||||| |||||||||||| Sbjct: 136123 tgggtgtcgtgggcgatcaaccccaccggcgacgacatgaagggcgc 136077
>ref|XM_483413.1| Oryza sativa (japonica cultivar-group), mRNA Length = 792 Score = 63.9 bits (32), Expect = 5e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 452 acgccgatcgcgttcgaggccgccgagctcgccgccgacgagggcgccgacgggaaggtg 511 ||||| ||||||||| |||| |||| |||||||||||||||||| || ||| ||| | Sbjct: 376 acgcccatcgcgttcccggccaccgacctcgccgccgacgagggcagcggcggcaagatc 435 Query: 512 cggctctacggcacgctgcagctgcccaaggg 543 || |||||||||| ||||||||| | |||||| Sbjct: 436 cgcctctacggcaagctgcagctccacaaggg 467 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 317 tgggtggcctgggggatcaaccccaccggcga 348 |||||||| |||||| | |||||||||||||| Sbjct: 232 tgggtggcgtgggggctgaaccccaccggcga 263
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 63.9 bits (32), Expect = 5e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 452 acgccgatcgcgttcgaggccgccgagctcgccgccgacgagggcgccgacgggaaggtg 511 ||||| ||||||||| |||| |||| |||||||||||||||||| || ||| ||| | Sbjct: 26079765 acgcccatcgcgttcccggccaccgacctcgccgccgacgagggcagcggcggcaagatc 26079824 Query: 512 cggctctacggcacgctgcagctgcccaaggg 543 || |||||||||| ||||||||| | |||||| Sbjct: 26079825 cgcctctacggcaagctgcagctccacaaggg 26079856 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 317 tgggtggcctgggggatcaaccccaccggcga 348 |||||||| |||||| | |||||||||||||| Sbjct: 26079621 tgggtggcgtgggggctgaaccccaccggcga 26079652
>dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1191_A10 Length = 140643 Score = 63.9 bits (32), Expect = 5e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 452 acgccgatcgcgttcgaggccgccgagctcgccgccgacgagggcgccgacgggaaggtg 511 ||||| ||||||||| |||| |||| |||||||||||||||||| || ||| ||| | Sbjct: 23696 acgcccatcgcgttcccggccaccgacctcgccgccgacgagggcagcggcggcaagatc 23755 Query: 512 cggctctacggcacgctgcagctgcccaaggg 543 || |||||||||| ||||||||| | |||||| Sbjct: 23756 cgcctctacggcaagctgcagctccacaaggg 23787 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 317 tgggtggcctgggggatcaaccccaccggcga 348 |||||||| |||||| | |||||||||||||| Sbjct: 23552 tgggtggcgtgggggctgaaccccaccggcga 23583
>gb|AY108865.1| Zea mays PCO075691 mRNA sequence Length = 425 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 197 tacgcgacgtgcgcggacctcccgaccctcggcgcctcgctgcactggacctacgacgcg 256 |||||| |||||| |||||| |||| || ||||| |||||||||||||| ||||||||| Sbjct: 185 tacgcgtcgtgcgaggacctgccgaagctgggcgcgtcgctgcactggacgtacgacgcg 244
>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29 Length = 308050 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 297 ccggcgcgagcggcgccggctgg 319 ||||||||||||||||||||||| Sbjct: 8615 ccggcgcgagcggcgccggctgg 8637
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 473 gccgagctcgccgccgacgagggcgccgacg 503 ||||||| ||||||||||||| ||||||||| Sbjct: 607054 gccgagcacgccgccgacgagcgcgccgacg 607084
>dbj|D31792.1| Streptomyces griseus DNA for serine/threonine protein kinases, complete cds Length = 3866 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 475 cgagctcgccgccgacgagggcg 497 ||||||||||||||||||||||| Sbjct: 3726 cgagctcgccgccgacgagggcg 3748
>ref|NM_191805.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1467 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 479 ctcgccgccgacgagggcgccg 500 |||||||||||||||||||||| Sbjct: 325 ctcgccgccgacgagggcgccg 346
>emb|AL096815.18|HSDJ310P5 Human DNA sequence from clone RP1-310P5 on chromosome 6q22.33-24.1 Contains a novel pseudogene, complete sequence Length = 31859 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 101 cagctggccctcctgctgctgg 122 |||||||||||||||||||||| Sbjct: 3546 cagctggccctcctgctgctgg 3525
>gb|AF296242.1| Psilotum nudum clone PNN2 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 608 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 479 ctcgccgccgacgagggcgccg 500 |||||||||||||||||||||| Sbjct: 481 ctcgccgccgacgagggcgccg 460
>gb|AF296234.1| Psilotum nudum clone P2 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 606 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 479 ctcgccgccgacgagggcgccg 500 |||||||||||||||||||||| Sbjct: 479 ctcgccgccgacgagggcgccg 458
>gb|AC034299.8| Homo sapiens chromosome 18, clone RP11-500P9, complete sequence Length = 130795 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 531 agctgcccaagggcatggaagc 552 |||||||||||||||||||||| Sbjct: 2949 agctgcccaagggcatggaagc 2970
>gb|AC011059.8| Homo sapiens chromosome 18, clone RP11-11F23, complete sequence Length = 143799 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 531 agctgcccaagggcatggaagc 552 |||||||||||||||||||||| Sbjct: 134615 agctgcccaagggcatggaagc 134636
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 469 ggccgccgagctcgccgccgac 490 |||||||||||||||||||||| Sbjct: 4893870 ggccgccgagctcgccgccgac 4893849
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 479 ctcgccgccgacgagggcgccg 500 |||||||||||||||||||||| Sbjct: 30052862 ctcgccgccgacgagggcgccg 30052883
>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0690B02 Length = 153116 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 479 ctcgccgccgacgagggcgccg 500 |||||||||||||||||||||| Sbjct: 48852 ctcgccgccgacgagggcgccg 48873
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 471 ccgccgagctcgccgccgacgagggcgccg 500 ||||||||| |||||||||||| ||||||| Sbjct: 4895603 ccgccgagcacgccgccgacgatggcgccg 4895574
>dbj|AK109203.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-C05, full insert sequence Length = 621 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 472 cgccgagctcgccgccgacgagggcg 497 |||||||||||||| ||||||||||| Sbjct: 119 cgccgagctcgccggcgacgagggcg 94
>dbj|AK105712.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-E11, full insert sequence Length = 1607 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 479 ctcgccgccgacgagggcgccg 500 |||||||||||||||||||||| Sbjct: 343 ctcgccgccgacgagggcgccg 364
>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11, complete sequence Length = 187956 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 469 ggccgccgagctcgccgccgac 490 |||||||||||||||||||||| Sbjct: 166278 ggccgccgagctcgccgccgac 166257
>ref|XM_470580.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1155 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 313 cggctgggtggcctgggggatcaac 337 ||||||||| ||||||||||||||| Sbjct: 210 cggctgggtcgcctgggggatcaac 234
>gb|BT017392.1| Zea mays clone EL01N0327G10.c mRNA sequence Length = 1029 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 298 cggcgcgagcggcgccggctg 318 ||||||||||||||||||||| Sbjct: 861 cggcgcgagcggcgccggctg 841
>ref|XM_361229.1| Magnaporthe grisea 70-15 hypothetical protein (MG10912.4) partial mRNA Length = 7863 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 469 ggccgccgagctcgccgccgacgag 493 |||||||| |||||||||||||||| Sbjct: 7347 ggccgccgcgctcgccgccgacgag 7371
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 ggccgccgagctcgccgccga 489 ||||||||||||||||||||| Sbjct: 3174036 ggccgccgagctcgccgccga 3174056
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 313 cggctgggtggcctgggggatcaac 337 ||||||||| ||||||||||||||| Sbjct: 4892539 cggctgggtcgcctgggggatcaac 4892563
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 525 cgctgcagctgcccaagggca 545 ||||||||||||||||||||| Sbjct: 3741317 cgctgcagctgcccaagggca 3741297
>gb|AC105731.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0064E16, complete sequence Length = 159092 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 313 cggctgggtggcctgggggatcaac 337 ||||||||| ||||||||||||||| Sbjct: 103008 cggctgggtcgcctgggggatcaac 102984
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 474 ccgagctcgccgccgacgagg 494 ||||||||||||||||||||| Sbjct: 4758907 ccgagctcgccgccgacgagg 4758887
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 466 cgaggccgccgagctcgccgccgacgagggcgccgac 502 |||||||| |||| ||||||||||||||| |||||| Sbjct: 13251077 cgaggccggcgaggccgccgccgacgagggggccgac 13251041 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 480 tcgccgccgacgagggcgccgacg 503 |||||| ||||||||||||||||| Sbjct: 17594507 tcgccggcgacgagggcgccgacg 17594530
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 313 cggctgggtggcctgggggatcaac 337 ||||||||| ||||||||||||||| Sbjct: 4891754 cggctgggtcgcctgggggatcaac 4891778
>dbj|AB189642.1| Halorhodospira halophila rnfA, nifA, nifB genes for RnfA, NifA, NifB, complete and partial cds Length = 3791 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 470 gccgccgagctcgccgccgacgagggcgc 498 |||||| ||| |||||||||||||||||| Sbjct: 1673 gccgcccagcccgccgccgacgagggcgc 1701
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 479 ctcgccgccgacgagggcgcc 499 ||||||||||||||||||||| Sbjct: 2119093 ctcgccgccgacgagggcgcc 2119073 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 cccggcgcgagcggcgccgg 315 |||||||||||||||||||| Sbjct: 8062224 cccggcgcgagcggcgccgg 8062205 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 gccgccgacgagggcgccga 501 |||||||||||||||||||| Sbjct: 7996548 gccgccgacgagggcgccga 7996529 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 cgccgacgagggcgccgacg 503 |||||||||||||||||||| Sbjct: 6620021 cgccgacgagggcgccgacg 6620002 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 471 ccgccgagctcgccgccgacgagg 494 ||||||| |||||||||||||||| Sbjct: 202683 ccgccgatctcgccgccgacgagg 202706
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 294 cgcccggcgcgagcggcgccg 314 ||||||||||||||||||||| Sbjct: 1542264 cgcccggcgcgagcggcgccg 1542244 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 469 ggccgccgagctcgccgccg 488 |||||||||||||||||||| Sbjct: 4555675 ggccgccgagctcgccgccg 4555694
>gb|AF217189.1|AF217189 Sorangium cellulosum putative transposase gene, partial cds; putative transposase gene, complete cds; epothilone biosynthesis gene cluster, complete sequence; putative membrane protein gene, complete cds Length = 58733 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 472 cgccgagctcgccgccgacga 492 ||||||||||||||||||||| Sbjct: 12384 cgccgagctcgccgccgacga 12404
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 468 aggccgccgagctcgccgccg 488 ||||||||||||||||||||| Sbjct: 4898793 aggccgccgagctcgccgccg 4898813 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 460 cgcgttcgaggccgccgagct 480 ||||||||||||||||||||| Sbjct: 125162 cgcgttcgaggccgccgagct 125142 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 cgagctcgccgccgacgagg 494 |||||||||||||||||||| Sbjct: 5901244 cgagctcgccgccgacgagg 5901225
>dbj|AP005449.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0427E01 Length = 146395 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 466 cgaggccgccgagctcgccgccgacgagggcgccgac 502 |||||||| |||| ||||||||||||||| |||||| Sbjct: 12887 cgaggccggcgaggccgccgccgacgagggggccgac 12851
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0012F14 Length = 168629 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 466 cgaggccgccgagctcgccgccgacgagggcgccgac 502 |||||||| |||| ||||||||||||||| |||||| Sbjct: 168265 cgaggccggcgaggccgccgccgacgagggggccgac 168229
>ref|XM_312045.2| Anopheles gambiae str. PEST ENSANGP00000016859 (ENSANGG00000014370), partial mRNA Length = 744 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 ggccgccgagctcgccgccga 489 ||||||||||||||||||||| Sbjct: 649 ggccgccgagctcgccgccga 629
>ref|XM_308314.2| Anopheles gambiae str. PEST ENSANGP00000009384 (ENSANGG00000007024), partial mRNA Length = 17172 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 529 gcagctgcccaagggcatgga 549 ||||||||||||||||||||| Sbjct: 10311 gcagctgcccaagggcatgga 10331
>dbj|AK104464.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C06, full insert sequence Length = 1194 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 466 cgaggccgccgagctcgccgccgacgagggcgccgac 502 |||||||| |||| ||||||||||||||| |||||| Sbjct: 777 cgaggccggcgaggccgccgccgacgagggggccgac 741
>dbj|AK104413.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-B05, full insert sequence Length = 1496 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 313 cggctgggtggcctgggggatcaac 337 ||||||||| ||||||||||||||| Sbjct: 286 cggctgggtcgcctgggggatcaac 310
>dbj|AK104377.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-G09, full insert sequence Length = 1196 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 466 cgaggccgccgagctcgccgccgacgagggcgccgac 502 |||||||| |||| ||||||||||||||| |||||| Sbjct: 779 cgaggccggcgaggccgccgccgacgagggggccgac 743
>dbj|AK104270.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-F03, full insert sequence Length = 1214 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 466 cgaggccgccgagctcgccgccgacgagggcgccgac 502 |||||||| |||| ||||||||||||||| |||||| Sbjct: 779 cgaggccggcgaggccgccgccgacgagggggccgac 743
>dbj|AK104041.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-H11, full insert sequence Length = 1530 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 313 cggctgggtggcctgggggatcaac 337 ||||||||| ||||||||||||||| Sbjct: 320 cggctgggtcgcctgggggatcaac 344
>dbj|AK100193.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036J06, full insert sequence Length = 1074 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 466 cgaggccgccgagctcgccgccgacgagggcgccgac 502 |||||||| |||| ||||||||||||||| |||||| Sbjct: 657 cgaggccggcgaggccgccgccgacgagggggccgac 621
>dbj|AK099616.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050J20, full insert sequence Length = 1197 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 466 cgaggccgccgagctcgccgccgacgagggcgccgac 502 |||||||| |||| ||||||||||||||| |||||| Sbjct: 780 cgaggccggcgaggccgccgccgacgagggggccgac 744
>dbj|AK099141.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055A02, full insert sequence Length = 1195 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 466 cgaggccgccgagctcgccgccgacgagggcgccgac 502 |||||||| |||| ||||||||||||||| |||||| Sbjct: 778 cgaggccggcgaggccgccgccgacgagggggccgac 742
>dbj|AK099015.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116H02, full insert sequence Length = 1202 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 466 cgaggccgccgagctcgccgccgacgagggcgccgac 502 |||||||| |||| ||||||||||||||| |||||| Sbjct: 780 cgaggccggcgaggccgccgccgacgagggggccgac 744
>dbj|AK073531.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044F19, full insert sequence Length = 1220 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 466 cgaggccgccgagctcgccgccgacgagggcgccgac 502 |||||||| |||| ||||||||||||||| |||||| Sbjct: 778 cgaggccggcgaggccgccgccgacgagggggccgac 742
>dbj|AK070149.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042P18, full insert sequence Length = 1534 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 313 cggctgggtggcctgggggatcaac 337 ||||||||| ||||||||||||||| Sbjct: 318 cggctgggtcgcctgggggatcaac 342
>dbj|AK061389.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-B12, full insert sequence Length = 1105 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 313 cggctgggtggcctgggggatcaac 337 ||||||||| ||||||||||||||| Sbjct: 320 cggctgggtcgcctgggggatcaac 344
>ref|XM_464476.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1272 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 ccgccgagctcgccgccgac 490 |||||||||||||||||||| Sbjct: 668 ccgccgagctcgccgccgac 687
>gb|AC138196.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0032M21 map C83B, complete sequence Length = 48636 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 cgccgagctcgccgccgacg 491 |||||||||||||||||||| Sbjct: 5533 cgccgagctcgccgccgacg 5552
>gb|AC116949.11| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0040B10 map R2918, complete sequence Length = 149132 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 cgccgagctcgccgccgacg 491 |||||||||||||||||||| Sbjct: 124528 cgccgagctcgccgccgacg 124547
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 ccggcgcgagcggcgccggc 316 |||||||||||||||||||| Sbjct: 1811480 ccggcgcgagcggcgccggc 1811461
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 cgccgagctcgccgccgacg 491 |||||||||||||||||||| Sbjct: 524277 cgccgagctcgccgccgacg 524258
>ref|XM_362158.1| Magnaporthe grisea 70-15 predicted protein (MG04603.4) partial cds Length = 936 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 ccctcctgctgctggcagcg 127 |||||||||||||||||||| Sbjct: 23 ccctcctgctgctggcagcg 42
>gb|BC046391.2| Homo sapiens involucrin, mRNA (cDNA clone MGC:25201 IMAGE:4749952), complete cds Length = 2138 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 ctccagctggccctcctgctgctg 121 ||||||||| |||||||||||||| Sbjct: 721 ctccagctgcccctcctgctgctg 698
>gb|AC091395.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-288L22, complete sequence Length = 163323 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 ctggccctcctgctgctggc 123 |||||||||||||||||||| Sbjct: 80293 ctggccctcctgctgctggc 80312
>ref|NM_012285.1| Homo sapiens potassium voltage-gated channel, subfamily H (eag-related), member 4 (KCNH4), mRNA Length = 3920 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 305 agcggcgccggctgggtggcctggggga 332 ||||| ||| |||||||||||||||||| Sbjct: 3099 agcggagcctgctgggtggcctggggga 3072
>ref|XM_752666.1| Ustilago maydis 521 hypothetical protein (UM01612.1) partial mRNA Length = 5604 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 483 ccgccgacgagggcgccgacggga 506 ||||||| |||||||||||||||| Sbjct: 3775 ccgccgatgagggcgccgacggga 3798
>ref|XM_753745.1| Ustilago maydis 521 hypothetical protein (UM02691.1) partial mRNA Length = 3126 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 gccgccgacgagggcgccga 501 |||||||||||||||||||| Sbjct: 1333 gccgccgacgagggcgccga 1352
>ref|XM_754572.1| Ustilago maydis 521 hypothetical protein (UM03518.1) partial mRNA Length = 3621 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 tacgacgcggcgacctcgtc 267 |||||||||||||||||||| Sbjct: 2542 tacgacgcggcgacctcgtc 2523
>emb|AJ245406.1|DME245406 Drosophila melanogaster partial kettin gene Length = 37107 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 530 cagctgcccaagggcatgga 549 |||||||||||||||||||| Sbjct: 14635 cagctgcccaagggcatgga 14654
>gb|AC166057.2| Mus musculus BAC clone RP23-385D11 from chromosome 14, complete sequence Length = 198165 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 557 aaccacatctggcaggtagg 576 |||||||||||||||||||| Sbjct: 191717 aaccacatctggcaggtagg 191698
>emb|AL162596.30| Human DNA sequence from clone RP1-13P20 on chromosome 1q21.1-21.3 Contains the SPRL2A gene for small proline rich-like (epidermal differentiation complex) 2A, the LEP1 gene for late envelope protein 1, a novel gene, the MCSP gene for mitochondrial capsule selenoprotein and the IVL gene for involucrin, complete sequence Length = 116067 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 ctccagctggccctcctgctgctg 121 ||||||||| |||||||||||||| Sbjct: 100919 ctccagctgcccctcctgctgctg 100896
>emb|Y14206.1|SCY14206 Streptomyces coelicolor A3(2) mreB, mreC, mreD, pbp, sfr genes and ORF Length = 7585 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 cgccgacgagggcgccgacg 503 |||||||||||||||||||| Sbjct: 2790 cgccgacgagggcgccgacg 2771
>emb|X56434.1|STTONB S.typhimurium tonB gene and P14 gene, partial cds Length = 950 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 acctcgtcgctttccctggc 279 |||||||||||||||||||| Sbjct: 135 acctcgtcgctttccctggc 154
>gb|AE008777.1| Salmonella typhimurium LT2, section 81 of 220 of the complete genome Length = 20653 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 acctcgtcgctttccctggc 279 |||||||||||||||||||| Sbjct: 6693 acctcgtcgctttccctggc 6674
>emb|BX842577.1| Mycobacterium tuberculosis H37Rv complete genome; segment 6/13 Length = 347496 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 ccggcgcgagcggcgccggc 316 |||||||||||||||||||| Sbjct: 89316 ccggcgcgagcggcgccggc 89297
>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16 Length = 345012 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 476 gagctcgccgccgacgagggcgcc 499 ||||||||||||||||||| |||| Sbjct: 44822 gagctcgccgccgacgaggccgcc 44799
>emb|BX248339.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 6/14 Length = 300050 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 ccggcgcgagcggcgccggc 316 |||||||||||||||||||| Sbjct: 191939 ccggcgcgagcggcgccggc 191920
>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29 Length = 310550 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 484 cgccgacgagggcgccgacg 503 |||||||||||||||||||| Sbjct: 109355 cgccgacgagggcgccgacg 109374
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29 Length = 300800 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 gccgccgacgagggcgccga 501 |||||||||||||||||||| Sbjct: 220224 gccgccgacgagggcgccga 220243
>emb|AJ579894.1|PSP579894 Pseudomonas sp. Y2 paa2 gene cluster for phenylacetate degradation Length = 21562 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 tggcagcgtcaccggcggcaatgc 143 |||||||||||||| ||||||||| Sbjct: 7419 tggcagcgtcaccgccggcaatgc 7442
>emb|AJ271740.1|DME271740 Drosophila melanogaster D-Titin gene, exons 1-37 Length = 70398 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 530 cagctgcccaagggcatgga 549 |||||||||||||||||||| Sbjct: 16390 cagctgcccaagggcatgga 16409
>gb|AC010034.7| Drosophila melanogaster 3L BAC RP98-4A21 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 154234 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 cagctgcccaagggcatgga 549 |||||||||||||||||||| Sbjct: 2358 cagctgcccaagggcatgga 2339
>gb|AC091222.3| Drosophila melanogaster 3L BAC RP98-11G24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 144056 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 cagctgcccaagggcatgga 549 |||||||||||||||||||| Sbjct: 76334 cagctgcccaagggcatgga 76315
>ref|NM_005547.2| Homo sapiens involucrin (IVL), mRNA Length = 2165 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 ctccagctggccctcctgctgctg 121 ||||||||| |||||||||||||| Sbjct: 778 ctccagctgcccctcctgctgctg 755
>dbj|AB084449.1| Methylobacillus sp. KY4400 aldehyde oxidase gene cluster (aoms, aomm, aoml, aom4, aom5), complete cds Length = 6060 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 115 gctgctggcagcgtcaccggcggcaatg 142 |||||||||||| |||||||||||||| Sbjct: 4480 gctgctggcagcaacaccggcggcaatg 4453
>ref|NM_144448.2| Drosophila melanogaster sallimus CG1915-RC, transcript variant C (sls), mRNA Length = 54815 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 530 cagctgcccaagggcatgga 549 |||||||||||||||||||| Sbjct: 10897 cagctgcccaagggcatgga 10916
>ref|NM_079937.2| Drosophila melanogaster sallimus CG1915-RA, transcript variant A (sls), mRNA Length = 15272 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 530 cagctgcccaagggcatgga 549 |||||||||||||||||||| Sbjct: 10897 cagctgcccaagggcatgga 10916
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 465 tcgaggccgccgagctcgccgccg 488 |||||||||||||||||| ||||| Sbjct: 4229057 tcgaggccgccgagctcgacgccg 4229034 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 466 cgaggccgccgagctcgccgccga 489 |||||||||||||||| ||||||| Sbjct: 897149 cgaggccgccgagctctccgccga 897172
>tpg|BK000146.1| TPA: TPA_exp: Drosophila melanogaster TITIN mRNA, complete cds Length = 53712 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 530 cagctgcccaagggcatgga 549 |||||||||||||||||||| Sbjct: 15418 cagctgcccaagggcatgga 15437
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 cgccgagctcgccgccgacg 491 |||||||||||||||||||| Sbjct: 2472431 cgccgagctcgccgccgacg 2472450
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 ccgccgagctcgccgccgac 490 |||||||||||||||||||| Sbjct: 5452423 ccgccgagctcgccgccgac 5452404
>dbj|AB164392.1| Ralstonia solanacearum gene for PabB, complete cds Length = 1881 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 470 gccgccgagctcgccgccgacgag 493 ||||||| |||||||||||||||| Sbjct: 694 gccgccgcgctcgccgccgacgag 717
>gb|AC009491.3|AC009491 Homo sapiens BAC clone RP11-418M8 from Y, complete sequence Length = 140934 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 ggccctcctgctgctggcag 125 |||||||||||||||||||| Sbjct: 77480 ggccctcctgctgctggcag 77461
>gb|AC099811.7| Homo sapiens chromosome 17, clone RP11-358B23, complete sequence Length = 174902 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 305 agcggcgccggctgggtggcctggggga 332 ||||| ||| |||||||||||||||||| Sbjct: 32069 agcggagcctgctgggtggcctggggga 32096
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 acctcgtcgctttccctggc 279 |||||||||||||||||||| Sbjct: 1210369 acctcgtcgctttccctggc 1210388
>dbj|AP004191.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1524_D08 Length = 143046 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 ccgccgagctcgccgccgac 490 |||||||||||||||||||| Sbjct: 106004 ccgccgagctcgccgccgac 105985
>dbj|AP003527.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0564B04 Length = 64684 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 480 tcgccgccgacgagggcgccgacg 503 |||||| ||||||||||||||||| Sbjct: 20855 tcgccggcgacgagggcgccgacg 20878
>dbj|AK120599.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149F09, full insert sequence Length = 1879 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 480 tcgccgccgacgagggcgccgacg 503 |||||| ||||||||||||||||| Sbjct: 596 tcgccggcgacgagggcgccgacg 619
>dbj|AK107061.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-E01, full insert sequence Length = 1996 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 cgccgagctcgccgccgacg 491 |||||||||||||||||||| Sbjct: 1348 cgccgagctcgccgccgacg 1367
>dbj|AK103578.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132P14, full insert sequence Length = 2166 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 480 tcgccgccgacgagggcgccgacg 503 |||||| ||||||||||||||||| Sbjct: 568 tcgccggcgacgagggcgccgacg 591
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 470 gccgccgagctcgccgccgacgag 493 ||||||| |||||||||||||||| Sbjct: 2836000 gccgccgcgctcgccgccgacgag 2835977
>gb|AE003473.3| Drosophila melanogaster chromosome 3L, section 7 of 83 of the complete sequence Length = 315108 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 cagctgcccaagggcatgga 549 |||||||||||||||||||| Sbjct: 258297 cagctgcccaagggcatgga 258278
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 acctcgtcgctttccctggc 279 |||||||||||||||||||| Sbjct: 1845099 acctcgtcgctttccctggc 1845080
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 ccgcccgctcagcgcgtggt 449 |||||||||||||||||||| Sbjct: 2243087 ccgcccgctcagcgcgtggt 2243068
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 cgccgagctcgccgccgacg 491 |||||||||||||||||||| Sbjct: 2480167 cgccgagctcgccgccgacg 2480186
>emb|AL731891.2|CNS08C8V Oryza sativa chromosome 12, . BAC OJ1374_A04 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 101173 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 465 tcgaggccgccgagctcgccgccg 488 ||||| |||||||||||||||||| Sbjct: 67058 tcgagcccgccgagctcgccgccg 67081
>emb|AL591782.1|SME591782 Sinorhizobium meliloti 1021 complete chromosome; segment 1/12 Length = 260050 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 ccaccggcgacggcatgaag 358 |||||||||||||||||||| Sbjct: 17260 ccaccggcgacggcatgaag 17279
>emb|AL928567.6| Mouse DNA sequence from clone RP23-296K20 on chromosome 11, complete sequence Length = 111073 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 gccctcctgctgctggcagc 126 |||||||||||||||||||| Sbjct: 25362 gccctcctgctgctggcagc 25381
>gb|M13903.1|HUMINV2 Human involucrin gene, exon 2 Length = 2108 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 ctccagctggccctcctgctgctg 121 ||||||||| |||||||||||||| Sbjct: 731 ctccagctgcccctcctgctgctg 708
>gb|M21864.1|LEMINVOL Lemur (ring-tailed) involucrin gene, complete cds Length = 1380 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 ttctccagctggccctcctgctgc 119 ||||||||||| |||||||||||| Sbjct: 1244 ttctccagctgtccctcctgctgc 1221
>gb|M17917.1|HUMIR3EB1 Human DNA with homology to EBV IR3 repeat, segment 1, clone Hu2 Length = 1400 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 ctccagctggccctcctgctgctg 121 ||||||||| |||||||||||||| Sbjct: 1134 ctccagctgcccctcctgctgctg 1111
>gb|AC170595.2| Mus musculus BAC clone RP23-444B8 from chromosome 14, complete sequence Length = 195329 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 557 aaccacatctggcaggtagg 576 |||||||||||||||||||| Sbjct: 153187 aaccacatctggcaggtagg 153206
>dbj|AB026845.2| Drosophila melanogaster mRNA for kettin, complete cds Length = 15244 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 530 cagctgcccaagggcatgga 549 |||||||||||||||||||| Sbjct: 10869 cagctgcccaagggcatgga 10888
>dbj|AB022698.1| Homo sapiens mRNA for BEC2, complete cds Length = 3920 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 305 agcggcgccggctgggtggcctggggga 332 ||||| ||| |||||||||||||||||| Sbjct: 3099 agcggagcctgctgggtggcctggggga 3072
>dbj|D87924.1| Actinomadura hibisca polyketide synthase genes for pradimicin, complete cds Length = 8168 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 471 ccgccgagctcgccgccgacgagggcgccgac 502 |||||||| |||||||||||| ||||||||| Sbjct: 3930 ccgccgagatcgccgccgacgtcggcgccgac 3961 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,727,537 Number of Sequences: 3902068 Number of extensions: 3727537 Number of successful extensions: 89630 Number of sequences better than 10.0: 116 Number of HSP's better than 10.0 without gapping: 121 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 84409 Number of HSP's gapped (non-prelim): 5212 length of query: 584 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 561 effective length of database: 17,143,297,704 effective search space: 9617390011944 effective search space used: 9617390011944 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
