Clone Name | bart56b05 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | 14KD_DAUCA (P14009) 14 kDa proline-rich protein DC2.15 precursor | 75 | 1e-13 | 2 | PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein | 69 | 1e-11 | 3 | CCDP_MAIZE (Q01595) Cortical cell-delineating protein precursor ... | 62 | 2e-09 | 4 | HPSE_SOYBN (P24337) Hydrophobic seed protein (HPS) (Allergen Gly... | 40 | 0.004 | 5 | ZFNL3_ORYSA (Q5NAV3) Zinc finger CCCH type domain-containing pro... | 30 | 4.9 |
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>14KD_DAUCA (P14009) 14 kDa proline-rich protein DC2.15 precursor| Length = 137 Score = 75.1 bits (183), Expect = 1e-13 Identities = 32/49 (65%), Positives = 42/49 (85%) Frame = +1 Query: 430 RCPIDALKLGVCANVLNGLINLQLGTPPKKPCCTLIQGLADLEAAVCLC 576 +CP DALKLGVCA+VLN + N+ +G+PP PCC+L++GL +LEAAVCLC Sbjct: 53 KCPRDALKLGVCADVLNLVHNVVIGSPPTLPCCSLLEGLVNLEAAVCLC 101
>PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein| Length = 346 Score = 68.9 bits (167), Expect = 1e-11 Identities = 29/48 (60%), Positives = 37/48 (77%) Frame = +1 Query: 433 CPIDALKLGVCANVLNGLINLQLGTPPKKPCCTLIQGLADLEAAVCLC 576 CPIDALKLG C +VL GLI++ +G K+ CC L+ GL DL+AA+CLC Sbjct: 261 CPIDALKLGACVDVLGGLIHIGIGGSAKQTCCPLLGGLVDLDAAICLC 308
>CCDP_MAIZE (Q01595) Cortical cell-delineating protein precursor (Root-specific| protein ZRP3) Length = 129 Score = 61.6 bits (148), Expect = 2e-09 Identities = 30/49 (61%), Positives = 38/49 (77%) Frame = +1 Query: 430 RCPIDALKLGVCANVLNGLINLQLGTPPKKPCCTLIQGLADLEAAVCLC 576 RCPIDALKL VCA VL GL+ ++G P + CC L++GL DL+AA+CLC Sbjct: 47 RCPIDALKLKVCAKVL-GLV--KVGLPQYEQCCPLLEGLVDLDAALCLC 92
>HPSE_SOYBN (P24337) Hydrophobic seed protein (HPS) (Allergen Gly m 1)| Length = 80 Score = 40.4 bits (93), Expect = 0.004 Identities = 21/41 (51%), Positives = 24/41 (58%) Frame = +1 Query: 454 LGVCANVLNGLINLQLGTPPKKPCCTLIQGLADLEAAVCLC 576 L +C N+L G LGT CC LI GL D+EA VCLC Sbjct: 11 LSICLNILGG----SLGTVDD--CCALIGGLGDIEAIVCLC 45
>ZFNL3_ORYSA (Q5NAV3) Zinc finger CCCH type domain-containing protein ZFN-like 3| Length = 466 Score = 30.0 bits (66), Expect = 4.9 Identities = 12/28 (42%), Positives = 19/28 (67%) Frame = -2 Query: 527 QHGFFGGVPSCRLISPLSTLAHTPSFSA 444 QHGF P+C+ P+ TL+++PS S+ Sbjct: 356 QHGFCKFGPTCKFDHPMGTLSYSPSASS 383 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,893,738 Number of Sequences: 219361 Number of extensions: 430327 Number of successful extensions: 1136 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1112 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1134 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4872342800 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)