ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart56b05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY106116.1| Zea mays PCO091367 mRNA sequence Length = 842 Score = 157 bits (79), Expect = 5e-35 Identities = 118/131 (90%) Strand = Plus / Plus Query: 442 gacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctgatcaacctgcagctg 501 |||||||||||||||||||||||||||||| |||| ||||||||||||||| | ||| Sbjct: 326 gacgcgctgaagctgggcgtgtgcgccaacttgctgaacgggctgatcaacgcgaccctg 385 Query: 502 ggcacgccgccgaagaagccgtgctgcacgctgatccaggggctcgccgacctggaggcg 561 || |||||||| | || ||||||||||||||||||||||||||| || |||||||||||| Sbjct: 386 gggacgccgcccaggacgccgtgctgcacgctgatccaggggctggcggacctggaggcg 445 Query: 562 gcggtgtgcct 572 ||||||||||| Sbjct: 446 gcggtgtgcct 456 Score = 73.8 bits (37), Expect = 6e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 133 gccacgctgctggccctgaacctcctcttcttcaccttcgccgacgcctgcggctgc 189 ||||| ||||||||||| |||||||||||||| ||||||||||||| ||||||||| Sbjct: 8 gccactctgctggccctcaacctcctcttctttgccttcgccgacgcatgcggctgc 64
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 127 bits (64), Expect = 4e-26 Identities = 121/140 (86%) Strand = Plus / Plus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctgatcaac 492 |||||||||||| ||||||||||||| |||||||| |||||||| || |||||||| ||| Sbjct: 198711 tgcccgatcgacacgctgaagctgggggtgtgcgcgaacgtgctgaatgggctgataaac 198770 Query: 493 ctgcagctgggcacgccgccgaagaagccgtgctgcacgctgatccaggggctcgccgac 552 |||||||||| ||||||||| | ||||||| |||| || |||||||| ||||||||| Sbjct: 198771 gtgcagctggggacgccgccgcggcagccgtgttgcagcctcatccagggcctcgccgac 198830 Query: 553 ctggaggcggcggtgtgcct 572 || ||||| || |||||||| Sbjct: 198831 cttgaggccgccgtgtgcct 198850 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 108 catggcgaagaaggcggcggtgatcgccacgctgctggccctgaacctcctcttcttcac 167 |||||||| ||| || | ||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 198413 catggcgacgaaagctggggtgatcgccacgctcctggccctgaacctccacttcttcac 198472 Query: 168 cttcgccgacgcctgcggctgccactgcgggtcctgccctag 209 |||| ||||||| ||||||||||| ||||| || |||||||| Sbjct: 198473 cttctccgacgcgtgcggctgccagtgcggctcatgccctag 198514 Score = 97.6 bits (49), Expect = 4e-17 Identities = 49/49 (100%) Strand = Plus / Plus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 480 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189692 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 189740 Score = 89.7 bits (45), Expect = 9e-15 Identities = 48/49 (97%) Strand = Plus / Plus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 480 ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 186988 gtgcccgatcgacgcgctgaagctgagcgtgtgcgccaacgtgctcaac 187036 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 441 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 |||||||||||||||| | ||||||||||||||||| Sbjct: 33114207 cgacgcgctgaagctgcgtgtgtgcgccaacgtgct 33114172
>gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0080O10, from chromosome 3, complete sequence Length = 127917 Score = 127 bits (64), Expect = 4e-26 Identities = 121/140 (86%) Strand = Plus / Plus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctgatcaac 492 |||||||||||| ||||||||||||| |||||||| |||||||| || |||||||| ||| Sbjct: 35778 tgcccgatcgacacgctgaagctgggggtgtgcgcgaacgtgctgaatgggctgataaac 35837 Query: 493 ctgcagctgggcacgccgccgaagaagccgtgctgcacgctgatccaggggctcgccgac 552 |||||||||| ||||||||| | ||||||| |||| || |||||||| ||||||||| Sbjct: 35838 gtgcagctggggacgccgccgcggcagccgtgttgcagcctcatccagggcctcgccgac 35897 Query: 553 ctggaggcggcggtgtgcct 572 || ||||| || |||||||| Sbjct: 35898 cttgaggccgccgtgtgcct 35917 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 108 catggcgaagaaggcggcggtgatcgccacgctgctggccctgaacctcctcttcttcac 167 |||||||| ||| || | ||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 35480 catggcgacgaaagctggggtgatcgccacgctcctggccctgaacctccacttcttcac 35539 Query: 168 cttcgccgacgcctgcggctgccactgcgggtcctgccctag 209 |||| ||||||| ||||||||||| ||||| || |||||||| Sbjct: 35540 cttctccgacgcgtgcggctgccagtgcggctcatgccctag 35581 Score = 97.6 bits (49), Expect = 4e-17 Identities = 49/49 (100%) Strand = Plus / Plus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 480 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 26759 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 26807 Score = 89.7 bits (45), Expect = 9e-15 Identities = 48/49 (97%) Strand = Plus / Plus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 480 ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 24055 gtgcccgatcgacgcgctgaagctgagcgtgtgcgccaacgtgctcaac 24103
>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAb0079B22, from chromosome 3, complete sequence Length = 156933 Score = 127 bits (64), Expect = 4e-26 Identities = 121/140 (86%) Strand = Plus / Plus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctgatcaac 492 |||||||||||| ||||||||||||| |||||||| |||||||| || |||||||| ||| Sbjct: 132711 tgcccgatcgacacgctgaagctgggggtgtgcgcgaacgtgctgaatgggctgataaac 132770 Query: 493 ctgcagctgggcacgccgccgaagaagccgtgctgcacgctgatccaggggctcgccgac 552 |||||||||| ||||||||| | ||||||| |||| || |||||||| ||||||||| Sbjct: 132771 gtgcagctggggacgccgccgcggcagccgtgttgcagcctcatccagggcctcgccgac 132830 Query: 553 ctggaggcggcggtgtgcct 572 || ||||| || |||||||| Sbjct: 132831 cttgaggccgccgtgtgcct 132850 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 108 catggcgaagaaggcggcggtgatcgccacgctgctggccctgaacctcctcttcttcac 167 |||||||| ||| || | ||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 132413 catggcgacgaaagctggggtgatcgccacgctcctggccctgaacctccacttcttcac 132472 Query: 168 cttcgccgacgcctgcggctgccactgcgggtcctgccctag 209 |||| ||||||| ||||||||||| ||||| || |||||||| Sbjct: 132473 cttctccgacgcgtgcggctgccagtgcggctcatgccctag 132514 Score = 97.6 bits (49), Expect = 4e-17 Identities = 49/49 (100%) Strand = Plus / Plus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 480 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123692 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 123740 Score = 89.7 bits (45), Expect = 9e-15 Identities = 48/49 (97%) Strand = Plus / Plus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 480 ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 120988 gtgcccgatcgacgcgctgaagctgagcgtgtgcgccaacgtgctcaac 121036
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 127 bits (64), Expect = 4e-26 Identities = 121/140 (86%) Strand = Plus / Plus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctgatcaac 492 |||||||||||| ||||||||||||| |||||||| |||||||| || |||||||| ||| Sbjct: 198711 tgcccgatcgacacgctgaagctgggggtgtgcgcgaacgtgctgaatgggctgataaac 198770 Query: 493 ctgcagctgggcacgccgccgaagaagccgtgctgcacgctgatccaggggctcgccgac 552 |||||||||| ||||||||| | ||||||| |||| || |||||||| ||||||||| Sbjct: 198771 gtgcagctggggacgccgccgcggcagccgtgttgcagcctcatccagggcctcgccgac 198830 Query: 553 ctggaggcggcggtgtgcct 572 || ||||| || |||||||| Sbjct: 198831 cttgaggccgccgtgtgcct 198850 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 108 catggcgaagaaggcggcggtgatcgccacgctgctggccctgaacctcctcttcttcac 167 |||||||| ||| || | ||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 198413 catggcgacgaaagctggggtgatcgccacgctcctggccctgaacctccacttcttcac 198472 Query: 168 cttcgccgacgcctgcggctgccactgcgggtcctgccctag 209 |||| ||||||| ||||||||||| ||||| || |||||||| Sbjct: 198473 cttctccgacgcgtgcggctgccagtgcggctcatgccctag 198514 Score = 97.6 bits (49), Expect = 4e-17 Identities = 49/49 (100%) Strand = Plus / Plus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 480 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189692 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 189740 Score = 89.7 bits (45), Expect = 9e-15 Identities = 48/49 (97%) Strand = Plus / Plus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 480 ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 186988 gtgcccgatcgacgcgctgaagctgagcgtgtgcgccaacgtgctcaac 187036 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 441 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 |||||||||||||||| | ||||||||||||||||| Sbjct: 33204717 cgacgcgctgaagctgcgtgtgtgcgccaacgtgct 33204682
>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence Length = 162241 Score = 127 bits (64), Expect = 4e-26 Identities = 121/140 (86%) Strand = Plus / Minus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctgatcaac 492 |||||||||||| ||||||||||||| |||||||| |||||||| || |||||||| ||| Sbjct: 63945 tgcccgatcgacacgctgaagctgggggtgtgcgcgaacgtgctgaatgggctgataaac 63886 Query: 493 ctgcagctgggcacgccgccgaagaagccgtgctgcacgctgatccaggggctcgccgac 552 |||||||||| ||||||||| | ||||||| |||| || |||||||| ||||||||| Sbjct: 63885 gtgcagctggggacgccgccgcggcagccgtgttgcagcctcatccagggcctcgccgac 63826 Query: 553 ctggaggcggcggtgtgcct 572 || ||||| || |||||||| Sbjct: 63825 cttgaggccgccgtgtgcct 63806 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Minus Query: 108 catggcgaagaaggcggcggtgatcgccacgctgctggccctgaacctcctcttcttcac 167 |||||||| ||| || | ||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 64243 catggcgacgaaagctggggtgatcgccacgctcctggccctgaacctccacttcttcac 64184 Query: 168 cttcgccgacgcctgcggctgccactgcgggtcctgccctag 209 |||| ||||||| ||||||||||| ||||| || |||||||| Sbjct: 64183 cttctccgacgcgtgcggctgccagtgcggctcatgccctag 64142 Score = 97.6 bits (49), Expect = 4e-17 Identities = 49/49 (100%) Strand = Plus / Minus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 480 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72962 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 72914 Score = 89.7 bits (45), Expect = 9e-15 Identities = 48/49 (97%) Strand = Plus / Minus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 480 ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 75666 gtgcccgatcgacgcgctgaagctgagcgtgtgcgccaacgtgctcaac 75618
>dbj|AK063645.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-H06, full insert sequence Length = 745 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 108 catggcgaagaaggcggcggtgatcgccacgctgctggccctgaacctcctcttcttcac 167 |||||||| ||| || | ||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 88 catggcgacgaaagctggggtgatcgccacgctcctggccctgaacctccacttcttcac 147 Query: 168 cttcgccgacgcctgcggctgccactgcgggtcctgccctag 209 |||| ||||||| ||||||||||| ||||| || |||||||| Sbjct: 148 cttctccgacgcgtgcggctgccagtgcggctcatgccctag 189
>dbj|AK063037.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-D01, full insert sequence Length = 498 Score = 97.6 bits (49), Expect = 4e-17 Identities = 49/49 (100%) Strand = Plus / Plus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 480 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 164
>dbj|AK062654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-E10, full insert sequence Length = 736 Score = 97.6 bits (49), Expect = 4e-17 Identities = 49/49 (100%) Strand = Plus / Plus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 480 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 264 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 312
>gb|AY466108.1| Oryza sativa (japonica cultivar-group) lipid transfer protein-like protein (LTP1) mRNA, complete cds Length = 772 Score = 89.7 bits (45), Expect = 9e-15 Identities = 48/49 (97%) Strand = Plus / Plus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 480 ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 282 gtgcccgatcgacgcgctgaagctgagcgtgtgcgccaacgtgctcaac 330
>dbj|AK103618.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133L09, full insert sequence Length = 780 Score = 89.7 bits (45), Expect = 9e-15 Identities = 48/49 (97%) Strand = Plus / Plus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaac 480 ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 303 gtgcccgatcgacgcgctgaagctgagcgtgtgcgccaacgtgctcaac 351
>ref|NM_197671.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.16), mRNA Length = 441 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgg 482 |||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 193 tgcccgatcgacgcgctgaagctgcgggtgtgcgccaacgtgctcaacgg 242
>gb|AC026758.8| Oryza sativa chromosome 10 BAC OSJNBa0015J15 genomic sequence, complete sequence Length = 144798 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgg 482 |||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 66285 tgcccgatcgacgcgctgaagctgcgggtgtgcgccaacgtgctcaacgg 66334 Score = 73.8 bits (37), Expect = 6e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 485 |||||||||||||| ||||||||| | |||||| ||||||||||||||||||| Sbjct: 49761 tgcccgatcgacgccctgaagctgagggtgtgcaccaacgtgctcaacgggct 49813 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 485 |||||||||||||| |||||||| | ||||| |||||||||||||||||||| Sbjct: 61915 tgcccgatcgacgccttgaagctgagggtgtgtgccaacgtgctcaacgggct 61967 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 485 ||||| |||||||| ||||||||| | |||||||||||||||||||| ||||| Sbjct: 57169 tgccccatcgacgccctgaagctgagggtgtgcgccaacgtgctcaatgggct 57221 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 485 ||||| |||||||| ||||||||| | |||||||||||||||||||| ||||| Sbjct: 53876 tgccccatcgacgccctgaagctgagggtgtgcgccaacgtgctcaatgggct 53928 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctc 477 ||||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 34026 gtgcccgcgcgacgcgctgaagctgcacgtgtgcgccaacgtgctc 34071 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 ||||||| |||||||||||||||| |||||||||||||||||| Sbjct: 27312 gtgcccgcgcgacgcgctgaagctgcacgtgtgcgccaacgtgct 27356 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 ||||||| |||||||||||||||||| | ||||||| ||||||| Sbjct: 68897 gtgcccgttcgacgcgctgaagctggcggcgtgcgccgacgtgct 68941 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 ||||||| ||||||| |||||||| | ||||||||||||||||| Sbjct: 30580 gtgcccgcgcgacgcgttgaagctgcgggtgtgcgccaacgtgct 30624
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgg 482 |||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 21139421 tgcccgatcgacgcgctgaagctgcgggtgtgcgccaacgtgctcaacgg 21139372 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctgatc 489 |||||||||||||| ||||||||| | |||||||||||| ||||||||||||||||| Sbjct: 10072477 tgcccgatcgacgccctgaagctgagggtgtgcgccaacctgctcaacgggctgatc 10072421 Score = 73.8 bits (37), Expect = 6e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 485 |||||||||||||| ||||||||| | |||||| ||||||||||||||||||| Sbjct: 21155945 tgcccgatcgacgccctgaagctgagggtgtgcaccaacgtgctcaacgggct 21155893 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 485 ||||| |||||||| ||||||||| | |||||||||||||||||||| ||||| Sbjct: 21151830 tgccccatcgacgccctgaagctgagggtgtgcgccaacgtgctcaatgggct 21151778 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 485 ||||| |||||||| ||||||||| | |||||||||||||||||||| ||||| Sbjct: 21148537 tgccccatcgacgccctgaagctgagggtgtgcgccaacgtgctcaatgggct 21148485 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 485 |||||||||||||| |||||||| | ||||| |||||||||||||||||||| Sbjct: 21143791 tgcccgatcgacgccttgaagctgagggtgtgtgccaacgtgctcaacgggct 21143739 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctc 477 ||||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 21171680 gtgcccgcgcgacgcgctgaagctgcacgtgtgcgccaacgtgctc 21171635 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctg 486 |||||||| ||||| |||||||| | |||||||||||||||||||| |||||| Sbjct: 10063521 tgcccgatggacgctttgaagctgagagtgtgcgccaacgtgctcaaggggctg 10063468 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 |||||||| ||||||||||||||||| |||||||| |||||||| Sbjct: 21267285 gtgcccgacggacgcgctgaagctgggggtgtgcgcgaacgtgct 21267329 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 ||||||| |||||||||||||||| |||||||||||||||||| Sbjct: 21178394 gtgcccgcgcgacgcgctgaagctgcacgtgtgcgccaacgtgct 21178350 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 ||||||||| |||| ||||||||| | ||||||||||||||||| Sbjct: 10055832 tgcccgatcaacgccctgaagctgagagtgtgcgccaacgtgct 10055789 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 550 gacctggaggcggcggtgtgcctgtgc 576 ||||||||||||||||||||||||||| Sbjct: 21267400 gacctggaggcggcggtgtgcctgtgc 21267426 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 449 tgaagctgggcgtgtgcgccaacgtgctcaacgggctg 486 |||||||| | ||||||||||||||||| ||||||||| Sbjct: 10048288 tgaagctgagagtgtgcgccaacgtgctaaacgggctg 10048251 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 ||||||| ||||||| |||||||| | ||||||||||||||||| Sbjct: 21175126 gtgcccgcgcgacgcgttgaagctgcgggtgtgcgccaacgtgct 21175082 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 ||||||| |||||||||||||||||| | ||||||| ||||||| Sbjct: 21136809 gtgcccgttcgacgcgctgaagctggcggcgtgcgccgacgtgct 21136765
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgg 482 |||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 21150685 tgcccgatcgacgcgctgaagctgcgggtgtgcgccaacgtgctcaacgg 21150636 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctgatc 489 |||||||||||||| ||||||||| | |||||||||||| ||||||||||||||||| Sbjct: 10078516 tgcccgatcgacgccctgaagctgagggtgtgcgccaacctgctcaacgggctgatc 10078460 Score = 73.8 bits (37), Expect = 6e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 485 |||||||||||||| ||||||||| | |||||| ||||||||||||||||||| Sbjct: 21167209 tgcccgatcgacgccctgaagctgagggtgtgcaccaacgtgctcaacgggct 21167157 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 485 ||||| |||||||| ||||||||| | |||||||||||||||||||| ||||| Sbjct: 21163094 tgccccatcgacgccctgaagctgagggtgtgcgccaacgtgctcaatgggct 21163042 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 485 ||||| |||||||| ||||||||| | |||||||||||||||||||| ||||| Sbjct: 21159801 tgccccatcgacgccctgaagctgagggtgtgcgccaacgtgctcaatgggct 21159749 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 485 |||||||||||||| |||||||| | ||||| |||||||||||||||||||| Sbjct: 21155055 tgcccgatcgacgccttgaagctgagggtgtgtgccaacgtgctcaacgggct 21155003 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctc 477 ||||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 21182944 gtgcccgcgcgacgcgctgaagctgcacgtgtgcgccaacgtgctc 21182899 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctg 486 |||||||| ||||| |||||||| | |||||||||||||||||||| |||||| Sbjct: 10069560 tgcccgatggacgctttgaagctgagagtgtgcgccaacgtgctcaaggggctg 10069507 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 |||||||| ||||||||||||||||| |||||||| |||||||| Sbjct: 21278549 gtgcccgacggacgcgctgaagctgggggtgtgcgcgaacgtgct 21278593 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 ||||||| |||||||||||||||| |||||||||||||||||| Sbjct: 21189658 gtgcccgcgcgacgcgctgaagctgcacgtgtgcgccaacgtgct 21189614 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 ||||||||| |||| ||||||||| | ||||||||||||||||| Sbjct: 10061871 tgcccgatcaacgccctgaagctgagagtgtgcgccaacgtgct 10061828 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 550 gacctggaggcggcggtgtgcctgtgc 576 ||||||||||||||||||||||||||| Sbjct: 21278664 gacctggaggcggcggtgtgcctgtgc 21278690 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 449 tgaagctgggcgtgtgcgccaacgtgctcaacgggctg 486 |||||||| | ||||||||||||||||| ||||||||| Sbjct: 10054327 tgaagctgagagtgtgcgccaacgtgctaaacgggctg 10054290 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 ||||||| ||||||| |||||||| | ||||||||||||||||| Sbjct: 21186390 gtgcccgcgcgacgcgttgaagctgcgggtgtgcgccaacgtgct 21186346 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 ||||||| |||||||||||||||||| | ||||||| ||||||| Sbjct: 21148073 gtgcccgttcgacgcgctgaagctggcggcgtgcgccgacgtgct 21148029
>gb|L27210.1|RICRCG2 Oryza sativa root-specific protein (RCg2) gene, complete cds Length = 2252 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgg 482 |||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 1849 tgcccgatcgacgcgctgaagctgcgggtgtgcgccaacgtgctcaacgg 1898
>gb|L27209.1|RICRCC2 Oryza sativa root-specific RCc2 mRNA, complete cds Length = 654 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgg 482 |||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 237 tgcccgatcgacgcgctgaagctgcgggtgtgcgccaacgtgctcaacgg 286
>ref|NM_195931.1| Oryza sativa (japonica cultivar-group) putative lipid tranfer protein (OSJNAb0078C13.15), mRNA Length = 381 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctgatc 489 |||||||||||||| ||||||||| | |||||||||||| ||||||||||||||||| Sbjct: 130 tgcccgatcgacgccctgaagctgagggtgtgcgccaacctgctcaacgggctgatc 186
>gb|AC123594.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0078C13, complete sequence Length = 146538 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctgatc 489 |||||||||||||| ||||||||| | |||||||||||| ||||||||||||||||| Sbjct: 89236 tgcccgatcgacgccctgaagctgagggtgtgcgccaacctgctcaacgggctgatc 89180 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctg 486 |||||||| ||||| |||||||| | |||||||||||||||||||| |||||| Sbjct: 80280 tgcccgatggacgctttgaagctgagagtgtgcgccaacgtgctcaaggggctg 80227 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 ||||||||| |||| ||||||||| | ||||||||||||||||| Sbjct: 72591 tgcccgatcaacgccctgaagctgagagtgtgcgccaacgtgct 72548 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 449 tgaagctgggcgtgtgcgccaacgtgctcaacgggctg 486 |||||||| | ||||||||||||||||| ||||||||| Sbjct: 65047 tgaagctgagagtgtgcgccaacgtgctaaacgggctg 65010
>dbj|AK062848.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-H12, full insert sequence Length = 662 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctgatc 489 |||||||||||||| ||||||||| | |||||||||||| ||||||||||||||||| Sbjct: 192 tgcccgatcgacgccctgaagctgagggtgtgcgccaacctgctcaacgggctgatc 248
>ref|NM_197676.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.11), mRNA Length = 411 Score = 73.8 bits (37), Expect = 6e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 485 |||||||||||||| ||||||||| | |||||| ||||||||||||||||||| Sbjct: 163 tgcccgatcgacgccctgaagctgagggtgtgcaccaacgtgctcaacgggct 215
>ref|XM_467170.1| Oryza sativa (japonica cultivar-group), mRNA Length = 833 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 441 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 |||||||||||||||||||||||||||||||||||| Sbjct: 261 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 296 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 518 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcct 572 ||||||||||| ||||| | ||||||||| |||||| ||||||||||||||||| Sbjct: 335 agccgtgctgcccgctgctggaggggctcgtcgacctcgaggcggcggtgtgcct 389
>ref|XM_473449.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 396 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 441 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 |||||||||||||||||||||||||||||||||||| Sbjct: 153 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 188 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 518 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcct 572 ||||||||||| ||||| | ||||||||| |||||| ||||||||||||||||| Sbjct: 227 agccgtgctgcccgctgctggaggggctcgtcgacctcgaggcggcggtgtgcct 281
>ref|XM_473448.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 393 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 441 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 |||||||||||||||||||||||||||||||||||| Sbjct: 153 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 188 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 518 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcct 572 ||||||||||| ||||| | ||||||||| |||||| ||||||||||| ||||| Sbjct: 227 agccgtgctgcccgctgctggaggggctcgtcgacctcgaggcggcggtatgcct 281
>gb|AY466109.1| Oryza sativa (japonica cultivar-group) lipid transfer protein-like protein (LTP2) mRNA, complete cds Length = 758 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 441 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 |||||||||||||||||||||||||||||||||||| Sbjct: 228 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 263 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 518 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcct 572 ||||||||||| ||||| | ||||||||| |||||| ||||||||||| ||||| Sbjct: 302 agccgtgctgcccgctgctggaggggctcgtcgacctcgaggcggcggtatgcct 356
>emb|AL606633.3|OSJN00060 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0010H02, complete sequence Length = 173522 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 441 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 |||||||||||||||||||||||||||||||||||| Sbjct: 147400 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 147435 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 441 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 |||||||||||||||||||||||||||||||||||| Sbjct: 144200 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 144235 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 518 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcct 572 ||||||||||| ||||| | ||||||||| |||||| ||||||||||||||||| Sbjct: 147474 agccgtgctgcccgctgctggaggggctcgtcgacctcgaggcggcggtgtgcct 147528 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 518 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcct 572 ||||||||||| ||||| | ||||||||| |||||| ||||||||||| ||||| Sbjct: 144274 agccgtgctgcccgctgctggaggggctcgtcgacctcgaggcggcggtatgcct 144328
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 441 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 |||||||||||||||||||||||||||||||||||| Sbjct: 27716774 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 27716809 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 441 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 |||||||||||||||||||||||||||||||||||| Sbjct: 27713574 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 27713609 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 518 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcct 572 ||||||||||| ||||| | ||||||||| |||||| ||||||||||||||||| Sbjct: 27716848 agccgtgctgcccgctgctggaggggctcgtcgacctcgaggcggcggtgtgcct 27716902 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 518 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcct 572 ||||||||||| ||||| | ||||||||| |||||| ||||||||||| ||||| Sbjct: 27713648 agccgtgctgcccgctgctggaggggctcgtcgacctcgaggcggcggtatgcct 27713702 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcg 466 |||||| ||||||||||| ||||| |||||||||| Sbjct: 32827379 gtgccccatcgacgcgctcaagctcggcgtgtgcg 32827345
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 441 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 |||||||||||||||||||||||||||||||||||| Sbjct: 26823741 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 26823776 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 518 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcct 572 ||||||||||| ||||| | ||||||||| |||||| ||||||||||||||||| Sbjct: 26823815 agccgtgctgcccgctgctggaggggctcgtcgacctcgaggcggcggtgtgcct 26823869
>dbj|AP004037.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1001_D02 Length = 129081 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 441 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 |||||||||||||||||||||||||||||||||||| Sbjct: 2284 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 2319 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 518 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcct 572 ||||||||||| ||||| | ||||||||| |||||| ||||||||||||||||| Sbjct: 2358 agccgtgctgcccgctgctggaggggctcgtcgacctcgaggcggcggtgtgcct 2412
>dbj|AP004883.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0516F12 Length = 146364 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 441 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 |||||||||||||||||||||||||||||||||||| Sbjct: 89794 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 89829 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 518 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcct 572 ||||||||||| ||||| | ||||||||| |||||| ||||||||||||||||| Sbjct: 89868 agccgtgctgcccgctgctggaggggctcgtcgacctcgaggcggcggtgtgcct 89922
>dbj|AK109149.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-F07, full insert sequence Length = 833 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 441 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 |||||||||||||||||||||||||||||||||||| Sbjct: 261 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 296 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 518 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcct 572 ||||||||||| ||||| | ||||||||| |||||| ||||||||||||||||| Sbjct: 335 agccgtgctgcccgctgctggaggggctcgtcgacctcgaggcggcggtgtgcct 389
>gb|L27208.1|RICRCC3 Oryza sativa root-specific RCc3 mRNA, complete cds Length = 715 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 441 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 |||||||||||||||||||||||||||||||||||| Sbjct: 186 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 221 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 518 agccgtgctgcacgctgatccaggggctcgccgacctggaggcggcggtgtgcct 572 ||||||||||| ||||| | ||||||||| |||||| ||||||||||||||||| Sbjct: 260 agccgtgctgcccgctgctggaggggctcgtcgacctcgaggcggcggtgtgcct 314
>gb|AY108363.1| Zea mays PCO069442 mRNA sequence Length = 837 Score = 67.9 bits (34), Expect = 3e-08 Identities = 34/34 (100%) Strand = Plus / Plus Query: 443 acgcgctgaagctgggcgtgtgcgccaacgtgct 476 |||||||||||||||||||||||||||||||||| Sbjct: 228 acgcgctgaagctgggcgtgtgcgccaacgtgct 261
>ref|NM_197675.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.12), mRNA Length = 396 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 485 ||||| |||||||| ||||||||| | |||||||||||||||||||| ||||| Sbjct: 148 tgccccatcgacgccctgaagctgagggtgtgcgccaacgtgctcaatgggct 200
>ref|NM_197674.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.13), mRNA Length = 396 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 485 ||||| |||||||| ||||||||| | |||||||||||||||||||| ||||| Sbjct: 148 tgccccatcgacgccctgaagctgagggtgtgcgccaacgtgctcaatgggct 200
>ref|NM_197672.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.15), mRNA Length = 429 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 485 |||||||||||||| |||||||| | ||||| |||||||||||||||||||| Sbjct: 178 tgcccgatcgacgccttgaagctgagggtgtgtgccaacgtgctcaacgggct 230
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 441 cgacgcgctgaagctgggcgtgtgcgccaacgtgctc 477 |||||||||||||||| |||||||||||||||||||| Sbjct: 24131130 cgacgcgctgaagctgcgcgtgtgcgccaacgtgctc 24131166
>dbj|AP004557.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0028A08 Length = 150818 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 441 cgacgcgctgaagctgggcgtgtgcgccaacgtgctc 477 |||||||||||||||| |||||||||||||||||||| Sbjct: 84616 cgacgcgctgaagctgcgcgtgtgcgccaacgtgctc 84652
>dbj|AK102086.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082M21, full insert sequence Length = 769 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggct 485 |||||||||||||| |||||||| | ||||| |||||||||||||||||||| Sbjct: 257 tgcccgatcgacgccttgaagctgagggtgtgtgccaacgtgctcaacgggct 309
>ref|NM_197679.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.8), mRNA Length = 402 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctc 477 ||||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 147 gtgcccgcgcgacgcgctgaagctgcacgtgtgcgccaacgtgctc 192
>ref|NM_195930.1| Oryza sativa (japonica cultivar-group) putative lipid tranfer protein (OSJNAb0078C13.14), mRNA Length = 393 Score = 60.0 bits (30), Expect = 8e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctg 486 |||||||| ||||| |||||||| | |||||||||||||||||||| |||||| Sbjct: 145 tgcccgatggacgctttgaagctgagagtgtgcgccaacgtgctcaaggggctg 198
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 441 cgacgcgctgaagctgggcgtgtgcgccaacgtgctca 478 |||||||||||||||| | ||||||||||||||||||| Sbjct: 9364 cgacgcgctgaagctgcgtgtgtgcgccaacgtgctca 9327
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 441 cgacgcgctgaagctgggcgtgtgcgccaacgtgctca 478 |||||||||||||||| | ||||||||||||||||||| Sbjct: 87252 cgacgcgctgaagctgcgtgtgtgcgccaacgtgctca 87289
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 441 cgacgcgctgaagctgggcgtgtgcgccaacgtgctca 478 |||||||||||||||| | ||||||||||||||||||| Sbjct: 11807633 cgacgcgctgaagctgcgtgtgtgcgccaacgtgctca 11807596
>dbj|AK062911.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-G07, full insert sequence Length = 757 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctc 477 ||||||| |||||||||||||||| ||||||||||||||||||| Sbjct: 234 gtgcccgcgcgacgcgctgaagctgcacgtgtgcgccaacgtgctc 279
>gb|AY108411.1| Zea mays PCO134698 mRNA sequence Length = 667 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 443 acgcgctgaagctgggcgtgtgcgccaacgtgct 476 |||||||||| ||||||||||||||||||||||| Sbjct: 271 acgcgctgaaactgggcgtgtgcgccaacgtgct 304
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 441 cgacgcgctgaagctgggcgtgtgcgccaacgtgctca 478 |||||||||||||||| | ||||||||||||||||||| Sbjct: 11886044 cgacgcgctgaagctgcgtgtgtgcgccaacgtgctca 11886007
>ref|NM_197681.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.6), mRNA Length = 399 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 ||||||| |||||||||||||||| |||||||||||||||||| Sbjct: 141 gtgcccgcgcgacgcgctgaagctgcacgtgtgcgccaacgtgct 185
>gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence, complete sequence Length = 135510 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 |||||||| ||||||||||||||||| |||||||| |||||||| Sbjct: 67074 gtgcccgacggacgcgctgaagctgggggtgtgcgcgaacgtgct 67030 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 550 gacctggaggcggcggtgtgcctgtgc 576 ||||||||||||||||||||||||||| Sbjct: 66959 gacctggaggcggcggtgtgcctgtgc 66933
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 441 cgacgcgctgaagctgggcgtgtgcgccaacgtgctc 477 |||||||||||||||| | |||||||||||||||||| Sbjct: 30578544 cgacgcgctgaagctgcgtgtgtgcgccaacgtgctc 30578508 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 gcgctgaagctgggcgtgtg 464 |||||||||||||||||||| Sbjct: 4437647 gcgctgaagctgggcgtgtg 4437666
>dbj|AP003309.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0036G09 Length = 124118 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 441 cgacgcgctgaagctgggcgtgtgcgccaacgtgctc 477 |||||||||||||||| | |||||||||||||||||| Sbjct: 61148 cgacgcgctgaagctgcgtgtgtgcgccaacgtgctc 61112
>dbj|AP003560.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1060H01 Length = 157987 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 441 cgacgcgctgaagctgggcgtgtgcgccaacgtgctc 477 |||||||||||||||| | |||||||||||||||||| Sbjct: 20821 cgacgcgctgaagctgcgtgtgtgcgccaacgtgctc 20785
>dbj|AK063684.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-E11, full insert sequence Length = 800 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 |||||||| ||||||||||||||||| |||||||| |||||||| Sbjct: 348 gtgcccgacggacgcgctgaagctgggggtgtgcgcgaacgtgct 392
>dbj|AK062381.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-B09, full insert sequence Length = 702 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 ||||||| |||||||||||||||| |||||||||||||||||| Sbjct: 210 gtgcccgcgcgacgcgctgaagctgcacgtgtgcgccaacgtgct 254
>ref|NM_185028.1| Oryza sativa (japonica cultivar-group), mRNA Length = 459 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 441 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 |||||||||||||||| | ||||||||||||||||| Sbjct: 87 cgacgcgctgaagctgcgtgtgtgcgccaacgtgct 122
>gb|AC108906.9| Oryza sativa chromosome 3 BAC OSJNBa0087C10 genomic sequence, complete sequence Length = 144487 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 441 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 |||||||||||||||| | ||||||||||||||||| Sbjct: 130348 cgacgcgctgaagctgcgtgtgtgcgccaacgtgct 130383
>gb|AC104321.7| Oryza sativa chromosome 3 BAC OSJNBa0052F07 genomic sequence, complete sequence Length = 139823 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 441 cgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 |||||||||||||||| | ||||||||||||||||| Sbjct: 9101 cgacgcgctgaagctgcgtgtgtgcgccaacgtgct 9136
>ref|NM_195926.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNAb0078C13.10), mRNA Length = 414 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 449 tgaagctgggcgtgtgcgccaacgtgctcaacgggctg 486 |||||||| | ||||||||||||||||| ||||||||| Sbjct: 182 tgaagctgagagtgtgcgccaacgtgctaaacgggctg 219
>gb|AY105972.1| Zea mays PCO122221 mRNA sequence Length = 768 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 441 cgacgcgctgaagctgggcgtgtgcgccaa 470 ||||||||| |||||||||||||||||||| Sbjct: 231 cgacgcgctcaagctgggcgtgtgcgccaa 260
>ref|XM_550375.1| Oryza sativa (japonica cultivar-group), mRNA Length = 992 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 432 gtgcccgatcgacgcgctgaagctg 456 ||||||||||||||||||||||||| Sbjct: 508 gtgcccgatcgacgcgctgaagctg 532
>ref|NM_197680.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.7), mRNA Length = 375 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 ||||||| ||||||| |||||||| | ||||||||||||||||| Sbjct: 117 gtgcccgcgcgacgcgttgaagctgcgggtgtgcgccaacgtgct 161
>ref|NM_197670.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.17), mRNA Length = 489 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 ||||||| |||||||||||||||||| | ||||||| ||||||| Sbjct: 189 gtgcccgttcgacgcgctgaagctggcggcgtgcgccgacgtgct 233
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 441 cgacgcgctgaagctgggcgtgtgcgccaacgtgctc 477 ||||||||| |||||| ||||||||||||| |||||| Sbjct: 19948991 cgacgcgctaaagctgcgcgtgtgcgccaatgtgctc 19949027 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 112 gcgaagaaggcggcggtgatcgcc 135 |||||||||||||||| ||||||| Sbjct: 25872659 gcgaagaaggcggcggcgatcgcc 25872636
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 432 gtgcccgatcgacgcgctgaagctg 456 ||||||||||||||||||||||||| Sbjct: 3455297 gtgcccgatcgacgcgctgaagctg 3455273 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 cgcctgcggctgccactgcg 196 |||||||||||||||||||| Sbjct: 9355989 cgcctgcggctgccactgcg 9355970
>dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0033B09 Length = 143545 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 432 gtgcccgatcgacgcgctgaagctg 456 ||||||||||||||||||||||||| Sbjct: 72001 gtgcccgatcgacgcgctgaagctg 71977
>dbj|AB023482.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone P0680A03 Length = 156054 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 432 gtgcccgatcgacgcgctgaagctg 456 ||||||||||||||||||||||||| Sbjct: 146851 gtgcccgatcgacgcgctgaagctg 146827
>dbj|AK107851.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-A09, full insert sequence Length = 764 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 ||||||| |||||||||||||||||| | ||||||| ||||||| Sbjct: 268 gtgcccgttcgacgcgctgaagctggcggcgtgcgccgacgtgct 312
>dbj|AK103637.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033134F12, full insert sequence Length = 1013 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 432 gtgcccgatcgacgcgctgaagctg 456 ||||||||||||||||||||||||| Sbjct: 508 gtgcccgatcgacgcgctgaagctg 532
>dbj|AK101305.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033M04, full insert sequence Length = 992 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 432 gtgcccgatcgacgcgctgaagctg 456 ||||||||||||||||||||||||| Sbjct: 508 gtgcccgatcgacgcgctgaagctg 532
>dbj|AK063090.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-A12, full insert sequence Length = 627 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 ||||||| ||||||| |||||||| | ||||||||||||||||| Sbjct: 202 gtgcccgcgcgacgcgttgaagctgcgggtgtgcgccaacgtgct 246
>dbj|AK059170.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-E12, full insert sequence Length = 1384 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 432 gtgcccgatcgacgcgctgaagctg 456 ||||||||||||||||||||||||| Sbjct: 925 gtgcccgatcgacgcgctgaagctg 949
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 441 cgacgcgctgaagctgggcgtgtgcgccaacgtgctc 477 ||||||||| |||||| ||||||||||||| |||||| Sbjct: 19875205 cgacgcgctaaagctgcgcgtgtgcgccaatgtgctc 19875241 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 112 gcgaagaaggcggcggtgatcgcc 135 |||||||||||||||| ||||||| Sbjct: 25800835 gcgaagaaggcggcggcgatcgcc 25800812
>emb|AL731888.5|CNS08C8S Oryza sativa chromosome 12, . BAC OJ1118_C12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 165433 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 441 cgacgcgctgaagctgggcgtgtgcgccaacgtgctc 477 ||||||||| |||||| ||||||||||||| |||||| Sbjct: 78269 cgacgcgctaaagctgcgcgtgtgcgccaatgtgctc 78233
>gb|BT017960.1| Zea mays clone EL01N0523B04.c mRNA sequence Length = 1282 Score = 48.1 bits (24), Expect = 0.032 Identities = 54/64 (84%) Strand = Plus / Plus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctgatcaa 491 ||||||||||||| ||||||||||| || ||||| ||||||| | |||||||||| | Sbjct: 636 gtgcccgatcgacacgctgaagctgaacgcgtgcgtggacgtgctgagcgggctgatcca 695 Query: 492 cctg 495 |||| Sbjct: 696 cctg 699
>emb|X60432.1|ZMPRP Z.mays PRP gene Length = 1402 Score = 48.1 bits (24), Expect = 0.032 Identities = 54/64 (84%) Strand = Plus / Plus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctgatcaa 491 ||||||||||||| ||||||||||| || ||||| ||||||| | |||||||||| | Sbjct: 762 gtgcccgatcgacacgctgaagctgaacgcgtgcgtggacgtgctgagcgggctgatcca 821 Query: 492 cctg 495 |||| Sbjct: 822 cctg 825
>gb|AY104687.1| Zea mays PCO121733 mRNA sequence Length = 680 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Plus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 ||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 224 tgcccgatcgacgcgctcaagctcaaggtgtgcgccaacgtgct 267
>gb|AY105001.1| Zea mays PCO123892 mRNA sequence Length = 1144 Score = 48.1 bits (24), Expect = 0.032 Identities = 54/64 (84%) Strand = Plus / Plus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgctcaacgggctgatcaa 491 ||||||||||||| ||||||||||| || ||||| ||||||| | |||||||||| | Sbjct: 423 gtgcccgatcgacacgctgaagctgaacgcgtgcgtggacgtgctgagcgggctgatcca 482 Query: 492 cctg 495 |||| Sbjct: 483 cctg 486
>gb|AF001634.1|AF001634 Zea mays physical impedance induced protein (IIG1) mRNA, complete cds Length = 677 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Plus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 ||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 237 tgcccgatcgacgcgctcaagctcaaggtgtgcgccaacgtgct 280
>ref|XM_474092.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 783 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcg 466 |||||| ||||||||||| ||||| |||||||||| Sbjct: 540 gtgccccatcgacgcgctcaagctcggcgtgtgcg 574
>dbj|AK108560.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-A10, full insert sequence Length = 719 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 460 gtgtgcgccaacgtgctcaacgggctg 486 ||||||||||||||||| ||||||||| Sbjct: 274 gtgtgcgccaacgtgctaaacgggctg 300
>dbj|AK105903.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-F11, full insert sequence Length = 1255 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcg 466 |||||| ||||||||||| ||||| |||||||||| Sbjct: 690 gtgccccatcgacgcgctcaagctcggcgtgtgcg 724
>dbj|AK105778.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-F10, full insert sequence Length = 1242 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcg 466 |||||| ||||||||||| ||||| |||||||||| Sbjct: 690 gtgccccatcgacgcgctcaagctcggcgtgtgcg 724
>dbj|AK104623.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-H11, full insert sequence Length = 1251 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcg 466 |||||| ||||||||||| ||||| |||||||||| Sbjct: 686 gtgccccatcgacgcgctcaagctcggcgtgtgcg 720
>dbj|AK071989.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094H13, full insert sequence Length = 1272 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcg 466 |||||| ||||||||||| ||||| |||||||||| Sbjct: 694 gtgccccatcgacgcgctcaagctcggcgtgtgcg 728
>dbj|AK061322.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-F03, full insert sequence Length = 1257 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcg 466 |||||| ||||||||||| ||||| |||||||||| Sbjct: 692 gtgccccatcgacgcgctcaagctcggcgtgtgcg 726
>emb|AL732331.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0413E07, complete sequence Length = 76546 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcg 466 |||||| ||||||||||| ||||| |||||||||| Sbjct: 22614 gtgccccatcgacgcgctcaagctcggcgtgtgcg 22580
>emb|AL606454.3|OSJN00009 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G05, complete sequence Length = 142556 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 432 gtgcccgatcgacgcgctgaagctgggcgtgtgcg 466 |||||| ||||||||||| ||||| |||||||||| Sbjct: 89665 gtgccccatcgacgcgctcaagctcggcgtgtgcg 89631
>ref|XM_479401.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1506 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 549 cgacctggaggcggcggtgtgc 570 |||||||||||||||||||||| Sbjct: 111 cgacctggaggcggcggtgtgc 132
>ref|XM_322391.1| Neurospora crassa OR74A hypothetical protein (NCU00306.1) partial mRNA Length = 1830 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 97 aagaagggagccatggcgaaga 118 |||||||||||||||||||||| Sbjct: 650 aagaagggagccatggcgaaga 629
>ref|XM_952684.1| Neurospora crassa OR74A hypothetical protein (NCU00306.1) partial mRNA Length = 1830 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 97 aagaagggagccatggcgaaga 118 |||||||||||||||||||||| Sbjct: 650 aagaagggagccatggcgaaga 629
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 549 cgacctggaggcggcggtgtgc 570 |||||||||||||||||||||| Sbjct: 27635189 cgacctggaggcggcggtgtgc 27635168
>dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0047B07 Length = 157797 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 549 cgacctggaggcggcggtgtgc 570 |||||||||||||||||||||| Sbjct: 92182 cgacctggaggcggcggtgtgc 92161
>dbj|AP003833.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1477_F01 Length = 158792 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 549 cgacctggaggcggcggtgtgc 570 |||||||||||||||||||||| Sbjct: 14291 cgacctggaggcggcggtgtgc 14270
>gb|AE010366.1| Methanopyrus kandleri AV19 section 65 of 157 of the complete genome Length = 11173 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 433 tgcccgatcgacgcgctgaag 453 ||||||||||||||||||||| Sbjct: 2279 tgcccgatcgacgcgctgaag 2299
>ref|XM_483067.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1470 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 453 gctgggcgtgtgcgccaacgtgctc 477 |||| |||||||||||||||||||| Sbjct: 957 gctgcgcgtgtgcgccaacgtgctc 981
>gb|AE012420.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 328 of 460 of the complete genome Length = 13708 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 121 gcggcggtgatcgccacgctg 141 ||||||||||||||||||||| Sbjct: 4736 gcggcggtgatcgccacgctg 4716
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 409 ggcggatcaggcgggctcgcg 429 ||||||||||||||||||||| Sbjct: 441672 ggcggatcaggcgggctcgcg 441652
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 gcggcggtgatcgccacgctg 141 ||||||||||||||||||||| Sbjct: 1332296 gcggcggtgatcgccacgctg 1332316 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 ctgcggctgccactgcgggt 199 |||||||||||||||||||| Sbjct: 2379043 ctgcggctgccactgcgggt 2379024
>gb|AE004719.1| Pseudomonas aeruginosa PAO1, section 280 of 529 of the complete genome Length = 10145 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 545 tcgccgacctggaggcggcgg 565 ||||||||||||||||||||| Sbjct: 2006 tcgccgacctggaggcggcgg 1986
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 502 ggcacgccgccgaagaagccg 522 ||||||||||||||||||||| Sbjct: 4086842 ggcacgccgccgaagaagccg 4086862
>gb|AC158193.2| Selaginella moellendorffii clone JGIASXY-5P19, complete sequence Length = 29585 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 398 gcggtggcggtggcggatcaggcgg 422 ||||||||||||||||||| ||||| Sbjct: 16501 gcggtggcggtggcggatccggcgg 16477
>ref|NM_185799.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 375 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 cgcctgcggctgccactgcg 196 |||||||||||||||||||| Sbjct: 366 cgcctgcggctgccactgcg 347
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 gcggcggtgatcgccacgct 140 |||||||||||||||||||| Sbjct: 929082 gcggcggtgatcgccacgct 929063
>gb|AC167702.2| Reniera sp. JGI-2005 clone JGIBAYC-9C21, complete sequence Length = 38590 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 ctcctcttcttcaccttcgc 173 |||||||||||||||||||| Sbjct: 4961 ctcctcttcttcaccttcgc 4980
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 111 ggcgaagaaggcggcggtgatcgc 134 ||||||||||||||||| |||||| Sbjct: 3344404 ggcgaagaaggcggcggcgatcgc 3344381
>ref|XM_416189.1| PREDICTED: Gallus gallus similar to Histone H1.10 (Methylated DNA binding protein-2-H1) (MDBP-2-H1) (LOC417948), mRNA Length = 697 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 100 aagggagccatggcgaagaaggcggcgg 127 |||| ||||| ||||||||||||||||| Sbjct: 659 aaggcagccaaggcgaagaaggcggcgg 686
>ref|XM_590970.2| PREDICTED: Bos taurus similar to ryanodine receptor 1 (skeletal) (LOC513307), partial mRNA Length = 6741 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 151 aacctcctcttcttcaccttcgcc 174 |||||||||||||||| ||||||| Sbjct: 5703 aacctcctcttcttcagcttcgcc 5680
>gb|AY548452.1| Fremyella diplosiphon clone 3106E11 putative two component hybrid sensor regulator gene, partial cds; and putative two component hybrid sensor kinase, TorS-like protein, and RsbS-like protein genes, complete cds Length = 5596 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 gcctgcggctgccactgcgg 197 |||||||||||||||||||| Sbjct: 4321 gcctgcggctgccactgcgg 4302
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 ggtggcggtggcggatcagg 419 |||||||||||||||||||| Sbjct: 1766490 ggtggcggtggcggatcagg 1766509
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 111 ggcgaagaaggcggcggtgatcgc 134 ||||||||||||||||| |||||| Sbjct: 642232 ggcgaagaaggcggcggcgatcgc 642255
>gb|AC127683.10| Mus musculus BAC clone RP24-171F12 from chromosome 7, complete sequence Length = 158570 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 aggaagaagggagccatggc 113 |||||||||||||||||||| Sbjct: 157196 aggaagaagggagccatggc 157215
>gb|AC121855.3| Mus musculus BAC clone RP24-97C18 from chromosome 6, complete sequence Length = 192062 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 tctagcttggtaggaagaagggag 106 ||||||||||| |||||||||||| Sbjct: 35735 tctagcttggtgggaagaagggag 35758
>gb|AC127299.3| Mus musculus BAC clone RP23-264I11 from 7, complete sequence Length = 160602 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 aggaagaagggagccatggc 113 |||||||||||||||||||| Sbjct: 138008 aggaagaagggagccatggc 137989
>emb|CR722992.2|CNS0GKT2 Tetraodon nigroviridis full-length cDNA Length = 495 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 aggaagaagggagccatggcgaag 117 |||||||||| ||||||||||||| Sbjct: 45 aggaagaaggaagccatggcgaag 22
>emb|CR722982.2|CNS0GKSS Tetraodon nigroviridis full-length cDNA Length = 495 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 aggaagaagggagccatggcgaag 117 |||||||||| ||||||||||||| Sbjct: 45 aggaagaaggaagccatggcgaag 22
>emb|CR714375.2|CNS0GE5V Tetraodon nigroviridis full-length cDNA Length = 495 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 aggaagaagggagccatggcgaag 117 |||||||||| ||||||||||||| Sbjct: 45 aggaagaaggaagccatggcgaag 22
>emb|CR713600.2|CNS0GDKC Tetraodon nigroviridis full-length cDNA Length = 495 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 aggaagaagggagccatggcgaag 117 |||||||||| ||||||||||||| Sbjct: 45 aggaagaaggaagccatggcgaag 22
>emb|CR705446.2|CNS0G79U Tetraodon nigroviridis full-length cDNA Length = 495 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 aggaagaagggagccatggcgaag 117 |||||||||| ||||||||||||| Sbjct: 45 aggaagaaggaagccatggcgaag 22
>emb|CR704705.2|CNS0G6P9 Tetraodon nigroviridis full-length cDNA Length = 496 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 aggaagaagggagccatggcgaag 117 |||||||||| ||||||||||||| Sbjct: 45 aggaagaaggaagccatggcgaag 22
>emb|CR699498.2|CNS0G2OM Tetraodon nigroviridis full-length cDNA Length = 495 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 aggaagaagggagccatggcgaag 117 |||||||||| ||||||||||||| Sbjct: 45 aggaagaaggaagccatggcgaag 22
>emb|CR689042.2|CNS0FUM6 Tetraodon nigroviridis full-length cDNA Length = 495 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 aggaagaagggagccatggcgaag 117 |||||||||| ||||||||||||| Sbjct: 45 aggaagaaggaagccatggcgaag 22
>emb|CR685219.2|CNS0FRNZ Tetraodon nigroviridis full-length cDNA Length = 495 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 aggaagaagggagccatggcgaag 117 |||||||||| ||||||||||||| Sbjct: 45 aggaagaaggaagccatggcgaag 22
>emb|CR679206.2|CNS0FN0Y Tetraodon nigroviridis full-length cDNA Length = 495 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 aggaagaagggagccatggcgaag 117 |||||||||| ||||||||||||| Sbjct: 45 aggaagaaggaagccatggcgaag 22
>emb|CR668108.2|CNS0FEHE Tetraodon nigroviridis full-length cDNA Length = 495 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 aggaagaagggagccatggcgaag 117 |||||||||| ||||||||||||| Sbjct: 45 aggaagaaggaagccatggcgaag 22
>emb|CR652978.2|CNS0F2T4 Tetraodon nigroviridis full-length cDNA Length = 495 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 aggaagaagggagccatggcgaag 117 |||||||||| ||||||||||||| Sbjct: 45 aggaagaaggaagccatggcgaag 22
>emb|CR650750.2|CNS0F138 Tetraodon nigroviridis full-length cDNA Length = 495 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 aggaagaagggagccatggcgaag 117 |||||||||| ||||||||||||| Sbjct: 45 aggaagaaggaagccatggcgaag 22
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 491 acctgcagctgggcacgccg 510 |||||||||||||||||||| Sbjct: 4912700 acctgcagctgggcacgccg 4912681 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 ggtgatcgccacgctgctgg 145 |||||||||||||||||||| Sbjct: 2625787 ggtgatcgccacgctgctgg 2625806
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 gcacgccgccgaagaagccg 522 |||||||||||||||||||| Sbjct: 2355359 gcacgccgccgaagaagccg 2355340
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 tggcgaagaaggcggcggtg 129 |||||||||||||||||||| Sbjct: 4051888 tggcgaagaaggcggcggtg 4051869
>emb|AL136362.10| Human DNA sequence from clone RP13-136L2 on chromosome X Contains a eukaryotic translation initiation factor 4A, isoform 1 (EIF4A1) pseudogene, complete sequence Length = 135240 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 cagagtgagctctgtctaaa 46 |||||||||||||||||||| Sbjct: 35715 cagagtgagctctgtctaaa 35734
>emb|Z12103.1|ZMDELINM Z.mays mRNA that delineates a novel subset of cortical cells Length = 594 Score = 40.1 bits (20), Expect = 7.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 ||||||||||||||||| ||||| ||||||||||| ||||| Sbjct: 162 tgcccgatcgacgcgctcaagctcaaggtgtgcgccaaagtgct 205
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 544 ctcgccgacctggaggcggcggtg 567 |||||||||||| ||||||||||| Sbjct: 2831885 ctcgccgacctgaaggcggcggtg 2831908
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 111 ggcgaagaaggcggcggtgatcgc 134 ||||||||||||||||| |||||| Sbjct: 450825 ggcgaagaaggcggcggcgatcgc 450848
>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29 Length = 290850 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 ccttcgccgacgcctgcggc 186 |||||||||||||||||||| Sbjct: 290253 ccttcgccgacgcctgcggc 290234
>gb|AC087341.4| Homo sapiens chromosome 8, clone RP11-381I15, complete sequence Length = 177835 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 57 gcacagcagctagtgagaggcagg 80 |||||||||| ||||||||||||| Sbjct: 51184 gcacagcagcaagtgagaggcagg 51207
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 437 cgatcgacgcgctgaagctgggcg 460 |||||| ||||||||||||||||| Sbjct: 562027 cgatcgccgcgctgaagctgggcg 562004
>gb|AE005912.1| Caulobacter crescentus CB15 section 238 of 359 of the complete genome Length = 10452 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 521 cgtgctgcacgctgatccaggggctcgccgac 552 ||||| ||||||||||||||| ||||| |||| Sbjct: 8282 cgtgcggcacgctgatccaggcgctcgtcgac 8313
>gb|AE012321.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 229 of 460 of the complete genome Length = 10029 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 ctgcggctgccactgcgggt 199 |||||||||||||||||||| Sbjct: 5534 ctgcggctgccactgcgggt 5553
>gb|DQ427901.1| Sorghum propinquum locus pHER1A01 genomic sequence Length = 389 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 510 gccgaagaagccgtgctgca 529 |||||||||||||||||||| Sbjct: 165 gccgaagaagccgtgctgca 184
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 gctgatccaggggctcgccg 550 |||||||||||||||||||| Sbjct: 2550034 gctgatccaggggctcgccg 2550053
>gb|AY027524.1| Frankia sp. CpI1 plasmid pFQ12, complete plasmid sequence Length = 22437 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 cgccgacctggaggcggcgg 565 |||||||||||||||||||| Sbjct: 2545 cgccgacctggaggcggcgg 2564
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 7.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 510 gccgaagaagccgtgctgcacgctgatc 537 |||||||||||||||| ||||||||||| Sbjct: 265990 gccgaagaagccgtgc-gcacgctgatc 265964
>dbj|AP002484.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0489A01 Length = 137174 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 gcgctgaagctgggcgtgtg 464 |||||||||||||||||||| Sbjct: 97729 gcgctgaagctgggcgtgtg 97748
>gb|AE004903.1| Pseudomonas aeruginosa PAO1, section 464 of 529 of the complete genome Length = 12460 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 cgtgctgcacgctgatccag 540 |||||||||||||||||||| Sbjct: 1487 cgtgctgcacgctgatccag 1506
>gb|AC010685.3|AC010685 Homo sapiens BAC clone RP11-465A8 from Y, complete sequence Length = 160302 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 cagagtgagctctgtctaaa 46 |||||||||||||||||||| Sbjct: 142114 cagagtgagctctgtctaaa 142133
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 cgtgctcaacgggctgatca 490 |||||||||||||||||||| Sbjct: 613048 cgtgctcaacgggctgatca 613067
>dbj|AP005813.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0676F10 Length = 142510 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 cgcctgcggctgccactgcg 196 |||||||||||||||||||| Sbjct: 123330 cgcctgcggctgccactgcg 123311
>dbj|AP003044.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0038C05 Length = 152941 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 cgcctgcggctgccactgcg 196 |||||||||||||||||||| Sbjct: 84399 cgcctgcggctgccactgcg 84380
>gb|AY105236.1| Zea mays PCO121732 mRNA sequence Length = 763 Score = 40.1 bits (20), Expect = 7.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 433 tgcccgatcgacgcgctgaagctgggcgtgtgcgccaacgtgct 476 ||||||||||||||||| || || ||||||||||||||||| Sbjct: 230 tgcccgatcgacgcgctcaaactcaaggtgtgcgccaacgtgct 273
>gb|AF106002.1|AF106002 Pseudomonas putida strain GM73 toluene tolerance protein Ttg2A (ttg2A), toluene tolerance protein Ttg2B (ttg2B), toluene tolerance protein Ttg2C (ttg2C), toluene tolerance protein Ttg2D (ttg2D), toluene tolerance protein Ttg2E (ttg2E), toluene tolerance protein Ttg2F (ttg2F), and UDP-N-acetylglucosamine enolpyruvyl transferase homolog (ttg2G) genes, complete cds Length = 5661 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 gtgctcaacgggctgatcaa 491 |||||||||||||||||||| Sbjct: 1954 gtgctcaacgggctgatcaa 1973
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 437 cgatcgacgcgctgaagctgggcg 460 |||||| ||||||||||||||||| Sbjct: 574146 cgatcgccgcgctgaagctgggcg 574123
>dbj|AP005887.2| Homo sapiens genomic DNA, chromosome 8q24, clone: KB1252A6, complete sequence Length = 149431 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 57 gcacagcagctagtgagaggcagg 80 |||||||||| ||||||||||||| Sbjct: 116607 gcacagcagcaagtgagaggcagg 116630
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 120 ggcggcggtgatcgccacgctgctggcc 147 ||||||| || ||||||||||||||||| Sbjct: 227339 ggcggcgctgttcgccacgctgctggcc 227366
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 cgacgcgctgaagctgggcg 460 |||||||||||||||||||| Sbjct: 2187376 cgacgcgctgaagctgggcg 2187357
>emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa0018C20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 137492 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 112 gcgaagaaggcggcggtgatcgcc 135 |||||||||||||||| ||||||| Sbjct: 94110 gcgaagaaggcggcggcgatcgcc 94087
>gb|M17018.1|CHKH1LH Chicken H1 histone gene lambda-H1.10 (.10 H1), complete cds and promoters Length = 1497 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 100 aagggagccatggcgaagaaggcggcgg 127 |||| ||||| ||||||||||||||||| Sbjct: 872 aaggcagccaaggcgaagaaggcggcgg 899
>gb|M81772.1|ERWBGPA Erwinia chrysanthemi putative antiterminator (argG) gene, complete cds; beta-glucoside permease (arbF) gene, complete cds; phospho- beta-glucosidase (arbB) gene, complete cds; unidentified open reading frame, 5' end Length = 5065 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 120 ggcggcggtgatcgccacgctgctggcc 147 |||||||||||||| ||||||| ||||| Sbjct: 2642 ggcggcggtgatcggcacgctgttggcc 2669
>dbj|D86074.1| Pinctada fucata mRNA for insoluble protein, complete cds Length = 3331 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 ggcggtggcggatcaggcgg 422 |||||||||||||||||||| Sbjct: 2156 ggcggtggcggatcaggcgg 2175 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,993,174 Number of Sequences: 3902068 Number of extensions: 2993174 Number of successful extensions: 78698 Number of sequences better than 10.0: 158 Number of HSP's better than 10.0 without gapping: 162 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 74747 Number of HSP's gapped (non-prelim): 3963 length of query: 576 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 553 effective length of database: 17,143,297,704 effective search space: 9480243630312 effective search space used: 9480243630312 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
