Clone Information

BLAST Search Result

Clone Name	bart56b04
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	EXPL1_ARATH (Q9LZT4) Expansin-like 1 precursor (AtEXPL1) (At-EXP...	76	7e-14
2	EXPL3_ARATH (Q9LZT5) Expansin-like 3 precursor (AtEXPL3) (At-EXP...	73	6e-13
3	EXPL2_ARATH (Q9SVE5) Expansin-like 2 precursor (AtEXPL2) (At-EXP...	72	8e-13
4	EXPR1_ARATH (O23547) Expansin-related protein 1 precursor (AtEXP...	41	0.002
5	PSL1_HUMAN (Q8TCT7) Signal peptide peptidase-like 2B (EC 3.4.23....	39	0.013
6	EXPB2_ARATH (Q9SHY6) Putative beta-expansin 2 precursor (AtEXPB2...	38	0.022
7	EXPB3_ARATH (Q9M0I2) Beta-expansin 3 precursor (AtEXPB3) (At-EXP...	37	0.038
8	EXPA7_ARATH (Q9LN94) Alpha-expansin 7 precursor (AtEXPA7) (At-EX...	36	0.064
9	EXPB1_ARATH (Q9SKU2) Beta-expansin 1 precursor (AtEXPB1) (At-EXP...	36	0.084
10	EXPA1_ARATH (Q9C554) Alpha-expansin 1 precursor (AtEXPA1) (At-EX...	35	0.14
11	EXP18_ARATH (Q9LQ07) Alpha-expansin 18 precursor (AtEXPA18) (At-...	35	0.14
12	EXP14_ARATH (Q9FMA0) Putative alpha-expansin 14 precursor (AtEXP...	35	0.19
13	EXP13_ARATH (Q9M9P0) Alpha-expansin 13 precursor (AtEXPA13) (At-...	34	0.24
14	EXP10_ARATH (Q9LDR9) Alpha-expansin 10 precursor (AtEXPA10) (At-...	34	0.24
15	EXB1B_MAIZE (Q07154) Beta-expansin 1b (Pollen allergen Zea m 1) ...	33	0.41
16	EXPA3_ARATH (O80932) Alpha-expansin 3 precursor (AtEXPA3) (At-EX...	33	0.41
17	EXB1A_MAIZE (P58738) Beta-expansin 1a precursor (Pollen allergen...	33	0.41
18	EXPB5_ARATH (Q9M203) Putative beta-expansin 5 precursor (AtEXPB5...	33	0.41
19	EXP16_ARATH (Q9M2S9) Alpha-expansin 16 precursor (AtEXPA16) (At-...	33	0.54
20	ACROL_HUMAN (P58840) Hypothetical acrosin-like protease (EC 3.4....	33	0.54
21	CEBPE_SHEEP (O77728) CCAAT/enhancer-binding protein epsilon (C/E...	33	0.71
22	CEBPE_RAT (P56261) CCAAT/enhancer-binding protein epsilon (C/EBP...	33	0.71
23	CEBPE_MOUSE (Q6PZD9) CCAAT/enhancer-binding protein epsilon (C/E...	33	0.71
24	EXP15_ARATH (O80622) Alpha-expansin 15 precursor (AtEXPA15) (At-...	33	0.71
25	H11_GLYBA (P40263) Histone H1-I	33	0.71
26	EXPA4_ARATH (O48818) Alpha-expansin 4 precursor (AtEXPA4) (At-EX...	32	0.92
27	POLR_EPMV (P20126) RNA replicase polyprotein (EC 2.7.7.48)	32	0.92
28	H11_GLYSA (P40266) Histone H1-I	32	0.92
29	FAS2_YEAST (P19097) Fatty acid synthase alpha subunit (EC 2.3.1....	32	1.2
30	EXPA6_ARATH (Q38865) Alpha-expansin 6 precursor (AtEXPA6) (At-EX...	32	1.2
31	ZN341_HUMAN (Q9BYN7) Zinc finger protein 341	32	1.2
32	SET1A_HUMAN (O15047) Histone-lysine N-methyltransferase, H3 lysi...	32	1.6
33	EXP20_ARATH (Q9SZM1) Alpha-expansin 20 precursor (AtEXPA20) (At-...	32	1.6
34	IF2_CHRVO (Q7NY13) Translation initiation factor IF-2	31	2.1
35	SIN3A_HUMAN (Q96ST3) Paired amphipathic helix protein Sin3a (Tra...	31	2.1
36	EXPA8_ARATH (O22874) Alpha-expansin 8 precursor (AtEXPA8) (At-EX...	31	2.1
37	SPEG_HUMAN (Q15772) Striated muscle preferentially expressed pro...	31	2.7
38	RFX1_HUMAN (P22670) MHC class II regulatory factor RFX1 (RFX) (E...	31	2.7
39	EXPA2_ARATH (Q38866) Alpha-expansin 2 precursor (AtEXPA2) (At-EX...	31	2.7
40	EXPB4_ARATH (Q9SHD1) Putative beta-expansin 4 precursor (AtEXPB4...	31	2.7
41	ACRO_HUMAN (P10323) Acrosin precursor (EC 3.4.21.10) [Contains: ...	30	3.5
42	SWR1_NEUCR (Q7S133) Helicase swr-1 (EC 3.6.1.-)	30	3.5
43	CEBPE_HUMAN (Q15744) CCAAT/enhancer-binding protein epsilon (C/E...	30	3.5
44	MPAC1_CYNDA (O04701) Major pollen allergen Cyn d 1	30	3.5
45	Y2232_MYCBO (P64954) Hypothetical protein Mb2232	30	4.6
46	Y2209_MYCTU (P64953) Hypothetical protein Rv2209/MT2265	30	4.6
47	EXPA5_ARATH (Q38864) Alpha-expansin 5 precursor (AtEXPA5) (At-EX...	30	4.6
48	MUTL_ECOLI (P23367) DNA mismatch repair protein mutL	30	4.6
49	EXPA9_ARATH (Q9LZ99) Alpha-expansin 9 precursor (AtEXPA9) (At-EX...	30	6.0
50	FOXC1_MOUSE (Q61572) Forkhead box protein C1 (Forkhead-related p...	30	6.0
51	CSKI1_MOUSE (Q6P9K8) Caskin-1 (CASK-interacting protein 1)	30	6.0
52	BRD4_MOUSE (Q9ESU6) Bromodomain-containing protein 4 (Mitotic ch...	30	6.0
53	BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 prot...	30	6.0
54	PCLO_MOUSE (Q9QYX7) Protein piccolo (Aczonin) (Multidomain presy...	29	7.8
55	TF65_CHICK (P98152) Transcription factor p65 (Nuclear factor NF-...	29	7.8
56	GBX2_CHICK (O42230) Homeobox protein GBX-2 (Gastrulation and bra...	29	7.8
57	IE63_HHV11 (P10238) Transcriptional regulator IE63 (VMW63) (ICP27)	29	7.8
58	Y5541_ARATH (Q9FKP8) ZF-HD homeobox protein At5g65410	29	7.8
59	MUTL_ECOL6 (Q8FAK9) DNA mismatch repair protein mutL	29	7.8
60	MPAO1_ORYSA (Q40638) Major pollen allergen Ory s 1 precursor (Or...	29	7.8
61	MPAL1_LOLPR (P14946) Pollen allergen Lol p 1 precursor (Lol p I)...	29	7.8
62	TMPB_TREPH (P29720) Treponemal membrane protein B precursor (Ant...	29	7.8

>EXPL1_ARATH (Q9LZT4) Expansin-like 1 precursor (AtEXPL1) (At-EXPL1)|
           (Ath-ExpBeta-2.1)
          Length = 265

 Score = 75.9 bits (185), Expect = 7e-14
 Identities = 33/69 (47%), Positives = 43/69 (62%)
 Frame = +3

Query: 207 SACDRCARHSKAAFYTSSLTLAAGSCGYGTAAASFNXXXXXXXXXXXXXXXVGCGACFQV 386
           +ACDRC   SKAA+++S+  L++G+C YG+ A SF                 GCGACFQV
Sbjct: 19  NACDRCLHRSKAAYFSSASALSSGACAYGSMATSFFAGHIAAAIPSIYKDGAGCGACFQV 78

Query: 387 RCKDKKLCS 413
           RCK+ KLCS
Sbjct: 79  RCKNPKLCS 87

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>EXPL3_ARATH (Q9LZT5) Expansin-like 3 precursor (AtEXPL3) (At-EXPL3)|
           (Ath-ExpBeta-2.3)
          Length = 263

 Score = 72.8 bits (177), Expect = 6e-13
 Identities = 31/69 (44%), Positives = 42/69 (60%)
 Frame = +3

Query: 207 SACDRCARHSKAAFYTSSLTLAAGSCGYGTAAASFNXXXXXXXXXXXXXXXVGCGACFQV 386
           +ACDRC   SKA++++S+  L++G+C YG  A SF                 GCGACFQV
Sbjct: 19  NACDRCLHRSKASYFSSASALSSGACAYGPMATSFFAGHIAAAIPSIYKDGAGCGACFQV 78

Query: 387 RCKDKKLCS 413
           RCK+ KLC+
Sbjct: 79  RCKNPKLCN 87

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>EXPL2_ARATH (Q9SVE5) Expansin-like 2 precursor (AtEXPL2) (At-EXPL2)|
           (Ath-ExpBeta-2.2)
          Length = 265

 Score = 72.4 bits (176), Expect = 8e-13
 Identities = 32/70 (45%), Positives = 42/70 (60%)
 Frame = +3

Query: 204 ASACDRCARHSKAAFYTSSLTLAAGSCGYGTAAASFNXXXXXXXXXXXXXXXVGCGACFQ 383
           A+ACDRC   SKAA+++S+  L++G+C YG+ A  F                 GCGACFQ
Sbjct: 19  AAACDRCLHSSKAAYFSSASALSSGACAYGSMATGFFAGHIAAALPSIYKDGSGCGACFQ 78

Query: 384 VRCKDKKLCS 413
           VRCK+  LCS
Sbjct: 79  VRCKNPTLCS 88

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>EXPR1_ARATH (O23547) Expansin-related protein 1 precursor (AtEXPR1) (At-EXPR1)|
           (Ath-ExpBeta-3.1)
          Length = 250

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 23/63 (36%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
 Frame = +3

Query: 231 HSKAAFYTSSLTLA--AGSCGYGTAAASFNXXXXXXXXXXXXXXXVGCGACFQVRCKDKK 404
           +S+A +Y S    A   G CGYG      N                GCGAC+QVRCK   
Sbjct: 29  NSRATYYGSPDCKANPRGHCGYGEFGRDINNGEVSGVSWRLWNNGTGCGACYQVRCKIPP 88

Query: 405 LCS 413
            CS
Sbjct: 89  HCS 91

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>PSL1_HUMAN (Q8TCT7) Signal peptide peptidase-like 2B (EC 3.4.23.-) (Protein|
           SPP-like 2B) (Protein SPPL2b) (Intramembrane protease 4)
           (IMP4) (Presenilin-like protein 1)
          Length = 592

 Score = 38.5 bits (88), Expect = 0.013
 Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
 Frame = -3

Query: 382 WKHAPQ--PTPPRYRAVPAAASRPPLKEAAAVPYP--QEPAARVSEEV*KAALEWRAQRS 215
           W  AP   P PP+  A P +  +PP +E A  P+P  Q P +R SEE+  A    R   S
Sbjct: 513 WAPAPADGPQPPKDSATPLSP-QPPSEEPATSPWPAEQSPKSRTSEEM-GAGAPMREPGS 570

Query: 214 QAEASDGREQ 185
            AE S+GR+Q
Sbjct: 571 PAE-SEGRDQ 579

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>EXPB2_ARATH (Q9SHY6) Putative beta-expansin 2 precursor (AtEXPB2) (At-EXPB2)|
           (Ath-ExpBeta-1.4)
          Length = 273

 Score = 37.7 bits (86), Expect = 0.022
 Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
 Frame = +3

Query: 276 GSCGYGTAAASFNXXXXXXXXX-XXXXXXVGCGACFQVRCKDKKLCS 413
           G+CGYG A A                    GCGAC+QV+C  K  CS
Sbjct: 66  GACGYGNAVAQPPFSKMVSAGGPSLFKSGKGCGACYQVKCTSKSACS 112

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>EXPB3_ARATH (Q9M0I2) Beta-expansin 3 precursor (AtEXPB3) (At-EXPB3)|
           (Ath-ExpBeta-1.6)
          Length = 264

 Score = 37.0 bits (84), Expect = 0.038
 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = +3

Query: 276 GSCGYGTAA-ASFNXXXXXXXXXXXXXXXVGCGACFQVRCKDKKLCS 413
           G+CGYGT                       GCGAC++VRC DK +CS
Sbjct: 55  GACGYGTLVDVKPLHARVGAVNPILFKNGEGCGACYKVRCLDKSICS 101

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>EXPA7_ARATH (Q9LN94) Alpha-expansin 7 precursor (AtEXPA7) (At-EXP7) (AtEx7)|
           (Ath-ExpAlpha-1.26)
          Length = 262

 Score = 36.2 bits (82), Expect = 0.064
 Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 3/64 (4%)
 Frame = +3

Query: 228 RHSKAAFY---TSSLTLAAGSCGYGTAAASFNXXXXXXXXXXXXXXXVGCGACFQVRCKD 398
           R++ A FY   T   T+  G+CGYG    S                  GCG CFQ+ C  
Sbjct: 38  RYAHATFYGDETGGETMG-GACGYGNLFNSGYGLSTAALSTTLFNDGYGCGQCFQITCSK 96

Query: 399 KKLC 410
              C
Sbjct: 97  SPHC 100

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>EXPB1_ARATH (Q9SKU2) Beta-expansin 1 precursor (AtEXPB1) (At-EXPB1)|
           (Ath-ExpBeta-1.5)
          Length = 271

 Score = 35.8 bits (81), Expect = 0.084
 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = +3

Query: 270 AAGSCGYGTAA--ASFNXXXXXXXXXXXXXXXVGCGACFQVRCKDKKLCS 413
           + G+CGYG+      F                 GCGAC++VRC DK +CS
Sbjct: 57  SGGACGYGSLVDVKPFKARVGAVSPILFKGGE-GCGACYKVRCLDKTICS 105

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>EXPA1_ARATH (Q9C554) Alpha-expansin 1 precursor (AtEXPA1) (At-EXP1) (AtEx1)|
           (Ath-ExpAlpha-1.2)
          Length = 250

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
 Frame = +3

Query: 276 GSCGYGTAAASFNXXXXXXXXXXXXXXXVGCGACFQVRCK-DKKLC 410
           G+CGYG   +                  + CGACF++RC+ D K C
Sbjct: 46  GACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIRCQNDGKWC 91

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>EXP18_ARATH (Q9LQ07) Alpha-expansin 18 precursor (AtEXPA18) (At-EXP18) (AtEx18)|
           (Ath-ExpAlpha-1.25)
          Length = 257

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 3/64 (4%)
 Frame = +3

Query: 228 RHSKAAFY---TSSLTLAAGSCGYGTAAASFNXXXXXXXXXXXXXXXVGCGACFQVRCKD 398
           R + A FY   T S T+  G+CGYG    S                   CG CFQ++C  
Sbjct: 32  RTASATFYGDDTGSATMG-GACGYGNMYDSGYGVATTALSTALFNEGYACGQCFQLKCVS 90

Query: 399 KKLC 410
              C
Sbjct: 91  SPNC 94

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>EXP14_ARATH (Q9FMA0) Putative alpha-expansin 14 precursor (AtEXPA14) (At-EXP14)|
           (AtEx14) (Ath-ExpAlpha-1.5)
          Length = 255

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
 Frame = +3

Query: 231 HSKAAFY--TSSLTLAAGSCGYGTAAASFNXXXXXXXXXXXXXXXVGCGACFQVRCKD 398
           +++A FY    +     G+CGYG   +                    CGACFQ++C D
Sbjct: 31  NARATFYGGADASGTMGGACGYGNLYSQGYGTNTAALSTALFNGGQSCGACFQIKCVD 88

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>EXP13_ARATH (Q9M9P0) Alpha-expansin 13 precursor (AtEXPA13) (At-EXP13) (AtEx13)|
           (Ath-ExpAlpha-1.22)
          Length = 266

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
 Frame = +3

Query: 228 RHSKAAFY--TSSLTLAAGSCGYGTAAASFNXXXXXXXXXXXXXXXVGCGACFQVRCKD 398
           R ++A +Y  T+      G+CGYG    S                   CGACF++RC D
Sbjct: 41  RPARATYYAATNPRDAVGGACGYGDLVKSGYGMATVGLSETLFERGQICGACFELRCVD 99

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>EXP10_ARATH (Q9LDR9) Alpha-expansin 10 precursor (AtEXPA10) (At-EXP10) (AtEx10)|
           (Ath-ExpAlpha-1.1)
          Length = 249

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
 Frame = +3

Query: 276 GSCGYGTAAASFNXXXXXXXXXXXXXXXVGCGACFQVRCK-DKKLC 410
           G+CGYG   +                  + CG+CF++RC+ D K C
Sbjct: 45  GACGYGNLYSQGYGTSTAALSTALFNNGLSCGSCFEIRCENDGKWC 90

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>EXB1B_MAIZE (Q07154) Beta-expansin 1b (Pollen allergen Zea m 1) (Zea m I)|
           (Fragment)
          Length = 191

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +3

Query: 363 GCGACFQVRCKDKKLCS 413
           GCG+C++VRCK+K  CS
Sbjct: 15  GCGSCYEVRCKEKPECS 31

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>EXPA3_ARATH (O80932) Alpha-expansin 3 precursor (AtEXPA3) (At-EXP3) (AtEx3)|
           (Ath-ExpAlpha-1.9)
          Length = 262

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
 Frame = +3

Query: 228 RHSKAAFYTSSLTLAA--GSCGYGTAAASFNXXXXXXXXXXXXXXXVGCGACFQVRCKD 398
           +++ A FY  S       G+CGYG   +                    CGACF+++C D
Sbjct: 37  QNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFEIKCTD 95

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>EXB1A_MAIZE (P58738) Beta-expansin 1a precursor (Pollen allergen Zea m 1) (Zea|
           m I)
          Length = 269

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +3

Query: 363 GCGACFQVRCKDKKLCS 413
           GCG+C++VRCK+K  CS
Sbjct: 93  GCGSCYEVRCKEKPECS 109

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>EXPB5_ARATH (Q9M203) Putative beta-expansin 5 precursor (AtEXPB5) (At-EXPB5)|
           (Ath-ExpBeta-1.3)
          Length = 264

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 10/74 (13%)
 Frame = +3

Query: 222 CARHSKAAFYTSSLT---------LAAGSCGYGTAAASFNXXXXXXXXX-XXXXXXVGCG 371
           C  H+K  + T+ +T            G+CGYG A A                    GCG
Sbjct: 26  CYCHNKTHWNTAGITWYGDREGPGTTGGACGYGDAVAKHPYRCMVSAGGPSLFKDGKGCG 85

Query: 372 ACFQVRCKDKKLCS 413
           AC++++C D  LC+
Sbjct: 86  ACYRLKC-DHPLCT 98

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>EXP16_ARATH (Q9M2S9) Alpha-expansin 16 precursor (AtEXPA16) (At-EXP16) (AtEx16)|
           (Ath-ExpAlpha-1.7)
          Length = 260

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
 Frame = +3

Query: 276 GSCGYGTAAASFNXXXXXXXXXXXXXXXVGCGACFQVRC-KDKKLC 410
           G+CGYG   +                    CGACF+++C  D K C
Sbjct: 53  GACGYGNLYSQGYGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWC 98

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>ACROL_HUMAN (P58840) Hypothetical acrosin-like protease (EC 3.4.21.-)|
           (Fragment)
          Length = 232

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
 Frame = -3

Query: 484 LSTRSVRFVLVLARSVTTTLAPA---PLQSFLSLHLTW--KHAPQPTPPRYRAVPAAASR 320
           + + ++R +        TT  P    P    LS HL W  +  P+P PPR    PAA  R
Sbjct: 100 IGSNALRMIQSATPPPPTTRPPPIRPPFSHPLSAHLPWYFQPPPRPLPPR---PPAAQPR 156

Query: 319 PPLKEAAAVPYPQEP 275
           PP       P P  P
Sbjct: 157 PPPSPPPPPPPPPSP 171

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>CEBPE_SHEEP (O77728) CCAAT/enhancer-binding protein epsilon (C/EBP epsilon)|
          Length = 281

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = -3

Query: 397 SLHLTWKHAPQPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAARVSEEV*KAALEWRAQR 218
           ++HL    A    P R    P AA+ PP       P P  P+ +  + V K +LE+R +R
Sbjct: 152 AMHLPPGLASPSQPLRVLKAPLAAAAPPCSPLLKAPSPAGPSHKGKKAVNKDSLEYRLRR 211

Query: 217 SQ 212
            +
Sbjct: 212 ER 213

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>CEBPE_RAT (P56261) CCAAT/enhancer-binding protein epsilon (C/EBP epsilon)|
           (C/EBP-related protein 1)
          Length = 281

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = -3

Query: 397 SLHLTWKHAPQPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAARVSEEV*KAALEWRAQR 218
           ++HL    A    P R    P AA+ PP       P P  P+ +  + V K +LE+R +R
Sbjct: 152 AVHLPPTLAAPGQPLRVLKAPVAAAAPPCSPLLKAPSPAGPSHKGKKAVNKDSLEYRLRR 211

Query: 217 SQ 212
            +
Sbjct: 212 ER 213

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>CEBPE_MOUSE (Q6PZD9) CCAAT/enhancer-binding protein epsilon (C/EBP epsilon)|
          Length = 281

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = -3

Query: 397 SLHLTWKHAPQPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAARVSEEV*KAALEWRAQR 218
           ++HL    A    P R    P AA+ PP       P P  P+ +  + V K +LE+R +R
Sbjct: 152 AVHLPPTLAAPGQPLRVLKAPVAAAAPPCSPLLKAPSPAGPSHKGKKAVNKDSLEYRLRR 211

Query: 217 SQ 212
            +
Sbjct: 212 ER 213

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>EXP15_ARATH (O80622) Alpha-expansin 15 precursor (AtEXPA15) (At-EXP15) (AtEx15)|
           (Ath-ExpAlpha-1.3)
          Length = 248

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
 Frame = +3

Query: 231 HSKAAFYTSSLTLAA--GSCGYGTAAASFNXXXXXXXXXXXXXXXVGCGACFQVRCK 395
           ++ A FY  S       G+CGYG   +                  + CGACF+++C+
Sbjct: 27  NAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCQ 83

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>H11_GLYBA (P40263) Histone H1-I|
          Length = 233

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
 Frame = -3

Query: 370 PQPTPPRYRAVPAA---ASRPPLKEAAAVPYPQEPAARVSEEV*KAALEWRAQRSQAEAS 200
           P+P   +  A PAA   A++P  K+AAA P  ++PAA+ S +  KAA + +A+ +  +++
Sbjct: 160 PKPAVEKKAAKPAAKKAAAKPAAKKAAAKPAAKKPAAKASPK--KAAAKPKAKPTPKKST 217

Query: 199 DGR 191
             +
Sbjct: 218 PAK 220

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>EXPA4_ARATH (O48818) Alpha-expansin 4 precursor (AtEXPA4) (At-EXP4) (AtEx4)|
           (Ath-ExpAlpha-1.6)
          Length = 257

 Score = 32.3 bits (72), Expect = 0.92
 Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
 Frame = +3

Query: 228 RHSKAAFYTSSLTLAA--GSCGYGTAAASFNXXXXXXXXXXXXXXXVGCGACFQVRC-KD 398
           +++ A FY  S       G+CGYG   +                  + CGACF+++C  D
Sbjct: 32  QNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGMSCGACFELKCAND 91

Query: 399 KKLC 410
            + C
Sbjct: 92  PQWC 95

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>POLR_EPMV (P20126) RNA replicase polyprotein (EC 2.7.7.48)|
          Length = 1839

 Score = 32.3 bits (72), Expect = 0.92
 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
 Frame = -3

Query: 448 ARSVTTTLAPAPLQSFLSLHLTWKHAPQPTPPRYRAV-----PAAASRPPLKEAAAVPYP 284
           A+S    L PAP Q+  S        P P PP + A+     P+ +S PPL+E    P+ 
Sbjct: 564 AQSFLPLLLPAPTQAQAS-------NPAPRPPAFHAIPLPPQPSTSSSPPLQEPTLSPHL 616

Query: 283 QEP 275
             P
Sbjct: 617 IHP 619

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>H11_GLYSA (P40266) Histone H1-I|
          Length = 233

 Score = 32.3 bits (72), Expect = 0.92
 Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
 Frame = -3

Query: 370 PQPTPPRYRAVPAA---ASRPPLKEAAAVPYPQEPAARVSEEV*KAALEWRAQ 221
           P+P   +  A PAA    ++P  K+AAA P  +EPAA+ S +  KAA + +A+
Sbjct: 160 PKPAVEKKAAKPAAKKAVAKPAAKKAAAKPAAKEPAAKASPK--KAAAKPKAK 210

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>FAS2_YEAST (P19097) Fatty acid synthase alpha subunit (EC 2.3.1.86) [Includes:|
           Acyl carrier; 3-oxoacyl-[acyl-carrier-protein] reductase
           (EC 1.1.1.100) (Beta-ketoacyl reductase);
           3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41)
           (Beta-ketoacyl synth
          Length = 1887

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 19/48 (39%), Positives = 26/48 (54%)
 Frame = -3

Query: 379 KHAPQPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAARVSEEV*KAAL 236
           + AP PTP      PAAA+  P+  AA    P   AA +++E  KA+L
Sbjct: 106 EEAPAPTPAASAPAPAAAAPAPVAAAA----PAAAAAEIADEPVKASL 149

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>EXPA6_ARATH (Q38865) Alpha-expansin 6 precursor (AtEXPA6) (At-EXP6) (AtEx6)|
           (Ath-ExpAlpha-1.8)
          Length = 257

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
 Frame = +3

Query: 276 GSCGYGTAAASFNXXXXXXXXXXXXXXXVGCGACFQVRC-KDKKLC 410
           G+CGYG   +                    CGACF+++C  D K C
Sbjct: 50  GACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFELKCASDPKWC 95

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>ZN341_HUMAN (Q9BYN7) Zinc finger protein 341|
          Length = 854

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 27/85 (31%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
 Frame = -3

Query: 460 VLVLARSVTTTL------APAPLQSFLSLH-----LTWKHAPQPTPPRYRAVPAAASRPP 314
           VL+ A S  T+L       P P+QS L++H     LT    P P PP     P     PP
Sbjct: 140 VLMSAMSAFTSLDQPMPQGPPPVQSSLNMHSVPSYLTQPPPPPPPPPPLPPPPPPQPPPP 199

Query: 313 LKEAAAVPYPQEPAARVSEEV*KAA 239
             ++   P    P      EV  AA
Sbjct: 200 PPQSLGPPGRPNPGGNGVVEVYSAA 224

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>SET1A_HUMAN (O15047) Histone-lysine N-methyltransferase, H3 lysine-4 specific|
            SET1 (EC 2.1.1.43) (Set1/Ash2 histone methyltransferase
            complex subunit SET1) (SET-domain-containing protein 1A)
          Length = 1707

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
 Frame = -3

Query: 421  PAPLQSFLSLHLTWKHAPQPTPPRYRAVPAAASRPP---LKEAAAVPYPQEPAARVSEEV 251
            P PL S + L   +  A +PTP      PA A RPP      AA    P +      E V
Sbjct: 1289 PRPLLSHILLEHNYALAVKPTP------PAPALRPPEPVPAPAALFSSPADEVLEAPEVV 1342

Query: 250  *KAALEWRAQRSQAEASDGREQ 185
               A E + Q+ Q +  +G E+
Sbjct: 1343 VAEAEEPKPQQLQQQREEGEEE 1364

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>EXP20_ARATH (Q9SZM1) Alpha-expansin 20 precursor (AtEXPA20) (At-EXP20) (AtEx20)|
           (Ath-ExpAlpha-1.23)
          Length = 256

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 15/46 (32%), Positives = 17/46 (36%)
 Frame = +3

Query: 255 SSLTLAAGSCGYGTAAASFNXXXXXXXXXXXXXXXVGCGACFQVRC 392
           SS     G+CGYG    S                   CGAC +VRC
Sbjct: 42  SSSVATGGACGYGDLRQSSFAGYSAGLSGKLFNRGSSCGACLEVRC 87

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>IF2_CHRVO (Q7NY13) Translation initiation factor IF-2|
          Length = 964

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
 Frame = -3

Query: 379 KHAPQPTP-----PRYRAVPAAASRPPLKEAAAVPYPQEPAARVSEEV*KAALEWRAQRS 215
           K  P+P P     P  +  P  A+ P  +  A++  P+E AAR +EE  +AA   R +  
Sbjct: 135 KPEPKPEPKVEAKPEPKPEPKPAAAPAPRTVASILSPEEIAAREAEEKRQAAFRARQEAL 194

Query: 214 QAEASDGREQ 185
             E  +  E+
Sbjct: 195 MREKIEREER 204

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>SIN3A_HUMAN (Q96ST3) Paired amphipathic helix protein Sin3a (Transcriptional|
           corepressor Sin3a) (Histone deacetylase complex subunit
           Sin3a)
          Length = 1273

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 18/38 (47%), Positives = 24/38 (63%)
 Frame = -3

Query: 370 PQPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAARVSE 257
           PQP PP++ + P+A S P    A A P PQ P A+VS+
Sbjct: 220 PQP-PPQHPSQPSAQSAP----APAQPAPQPPPAKVSK 252

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>EXPA8_ARATH (O22874) Alpha-expansin 8 precursor (AtEXPA8) (At-EXP8) (AtEx8)|
           (Ath-ExpAlpha-1.11)
          Length = 253

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 11/41 (26%), Positives = 17/41 (41%)
 Frame = +3

Query: 276 GSCGYGTAAASFNXXXXXXXXXXXXXXXVGCGACFQVRCKD 398
           G+CGYG                      + CGAC++++C D
Sbjct: 49  GACGYGNLYGQGYGTNTAALSTALFNNGLTCGACYEMKCND 89

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>SPEG_HUMAN (Q15772) Striated muscle preferentially expressed protein kinase|
           (EC 2.7.11.1) (Aortic preferentially expressed protein
           1) (APEG-1)
          Length = 3223

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 15/87 (17%)
 Frame = -3

Query: 481 STRSVRFVLVLARSVTTTLAPAPLQSFLSLHLTWKHAPQP-------------TPPRYRA 341
           S   +RF   L R   +T     ++S  SL  T + AP P             TP   RA
Sbjct: 488 SDLELRFAQELGRIRRSTSREELVRSHESLRATLQRAPSPREPGEPPLFSRPSTPKTSRA 547

Query: 340 VPAAASRPPLKEAAAVP--YPQEPAAR 266
           V  AA++PP   +A  P   P  P +R
Sbjct: 548 VSPAAAQPPSPSSAEKPGDEPGRPRSR 574

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>RFX1_HUMAN (P22670) MHC class II regulatory factor RFX1 (RFX) (Enhancer factor|
           C) (EF-C)
          Length = 979

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 18/63 (28%), Positives = 30/63 (47%)
 Frame = -3

Query: 373 APQPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAARVSEEV*KAALEWRAQRSQAEASDG 194
           AP P+ P  +A P A  +PP     A P P +P    +    +   E ++ + QA+   G
Sbjct: 12  APPPSQPP-QAPPQAQPQPPPPPPPAAPQPPQPPTAAATPQPQYVTELQSPQPQAQPPGG 70

Query: 193 REQ 185
           ++Q
Sbjct: 71  QKQ 73

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>EXPA2_ARATH (Q38866) Alpha-expansin 2 precursor (AtEXPA2) (At-EXP2) (AtEx2)|
           (Ath-ExpAlpha-1.12)
          Length = 255

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 12/41 (29%), Positives = 17/41 (41%)
 Frame = +3

Query: 276 GSCGYGTAAASFNXXXXXXXXXXXXXXXVGCGACFQVRCKD 398
           G+CGYG   +                    CGACF++ C+D
Sbjct: 51  GACGYGNLHSQGYGLQTAALSTALFNSGQKCGACFELTCED 91

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>EXPB4_ARATH (Q9SHD1) Putative beta-expansin 4 precursor (AtEXPB4) (At-EXPB4)|
           (Ath-ExpBeta-1.1)
          Length = 259

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
 Frame = +3

Query: 276 GSCGYGTAAASFNXXXXXXXXX-XXXXXXVGCGACFQVRCKDKKLCS 413
           G+CGYG+A A+                   GCG C+QV C     CS
Sbjct: 52  GACGYGSAVANPPLYAMVSAGGPSLFNNGKGCGTCYQVVCIGHPACS 98

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>ACRO_HUMAN (P10323) Acrosin precursor (EC 3.4.21.10) [Contains: Acrosin light|
           chain; Acrosin heavy chain]
          Length = 421

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 7/77 (9%)
 Frame = -3

Query: 484 LSTRSVRFVLVLARSVTTTLAPA---PLQSFLSLHLTW--KHAPQPTPPRYRAV--PAAA 326
           + + ++R +        TT  P    P    +S HL W  +  P+P PPR  A   P   
Sbjct: 289 IGSNALRMIQSATPPPPTTRPPPIRPPFSHPISAHLPWYFQPPPRPLPPRPPAAQPPPPP 348

Query: 325 SRPPLKEAAAVPYPQEP 275
           S PP     A P P  P
Sbjct: 349 SPPPPPPPPASPLPPPP 365

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>SWR1_NEUCR (Q7S133) Helicase swr-1 (EC 3.6.1.-)|
          Length = 1845

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
 Frame = -3

Query: 442 SVTTTLAPAPLQSFLSLHLTWKHAPQPTPPRYRAVPAAASRPPLKEAA----AVPYPQEP 275
           S +T+  PAP  S  S H   K  P P PP+  A  +A +      A+      P P+ P
Sbjct: 227 SASTSRKPAPASSSNSKHAPAKMPPPPPPPKAPARKSATTHETRPSASRSRRRSPSPRRP 286

Query: 274 A 272
           A
Sbjct: 287 A 287

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>CEBPE_HUMAN (Q15744) CCAAT/enhancer-binding protein epsilon (C/EBP epsilon)|
          Length = 281

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 18/62 (29%), Positives = 27/62 (43%)
 Frame = -3

Query: 397 SLHLTWKHAPQPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAARVSEEV*KAALEWRAQR 218
           ++HL    A    P R    P A + PP       P P  P  +  + V K +LE+R +R
Sbjct: 152 AMHLPPTLAAPGQPLRVLKAPLATAAPPCSPLLKAPSPAGPLHKGKKAVNKDSLEYRLRR 211

Query: 217 SQ 212
            +
Sbjct: 212 ER 213

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>MPAC1_CYNDA (O04701) Major pollen allergen Cyn d 1|
          Length = 246

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
 Frame = +3

Query: 234 SKAAFYTSSLTLAA-----GSCGYGTAAASFNXXXXXXXXXXXXXXXVGCGACFQVRCKD 398
           ++A FY S+   AA     G+CGY                       +GC AC++++CK+
Sbjct: 21  ARATFYGSNPRGAAPDDHGGACGYKDVDKPPFDGMTACGNEPIFKDGLGCRACYEIKCKE 80

Query: 399 KKLCS 413
              CS
Sbjct: 81  PVECS 85

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>Y2232_MYCBO (P64954) Hypothetical protein Mb2232|
          Length = 512

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = -3

Query: 367 QPTPPRYR-AVPAAASRP-PLKEAAAVPYPQEPAARVSE 257
           +P PP  R +   AA RP P K AAA+P P+ PA  V E
Sbjct: 463 RPAPPLNRPSCRRAARRPAPGKPAAALPQPRHPAVGVRE 501

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>Y2209_MYCTU (P64953) Hypothetical protein Rv2209/MT2265|
          Length = 512

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = -3

Query: 367 QPTPPRYR-AVPAAASRP-PLKEAAAVPYPQEPAARVSE 257
           +P PP  R +   AA RP P K AAA+P P+ PA  V E
Sbjct: 463 RPAPPLNRPSCRRAARRPAPGKPAAALPQPRHPAVGVRE 501

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>EXPA5_ARATH (Q38864) Alpha-expansin 5 precursor (AtEXPA5) (At-EXP5) (AtEx5)|
           (Ath-ExpAlpha-1.4)
          Length = 255

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
 Frame = +3

Query: 276 GSCGYGTAAASFNXXXXXXXXXXXXXXXVGCGACFQVRC-KDKKLC 410
           G+CGYG   +                  + CGACF++ C  D + C
Sbjct: 57  GACGYGNLYSQGYGLETAALSTALFDQGLSCGACFELMCVNDPQWC 102

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>MUTL_ECOLI (P23367) DNA mismatch repair protein mutL|
          Length = 615

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 21/68 (30%), Positives = 30/68 (44%)
 Frame = -3

Query: 391 HLTWKHAPQPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAARVSEEV*KAALEWRAQRSQ 212
           H     A +P  PRY   PA+ SRP    AA  P  Q    +   EV +  L+  A   +
Sbjct: 362 HFAEPAAREPVAPRYTPAPASGSRP----AAPWPNAQPGYQKQQGEVYRQLLQTPAPMQK 417

Query: 211 AEASDGRE 188
            +A + +E
Sbjct: 418 LKAPEPQE 425

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>EXPA9_ARATH (Q9LZ99) Alpha-expansin 9 precursor (AtEXPA9) (At-EXP9) (AtEx9)|
           (Ath-ExpAlpha-1.10)
          Length = 258

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 10/39 (25%), Positives = 17/39 (43%)
 Frame = +3

Query: 276 GSCGYGTAAASFNXXXXXXXXXXXXXXXVGCGACFQVRC 392
           G+CGYG   +                  + CG+CF+++C
Sbjct: 51  GACGYGNLYSQGYGVNTAALSTALFNNGLSCGSCFELKC 89

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>FOXC1_MOUSE (Q61572) Forkhead box protein C1 (Forkhead-related protein FKHL7)|
           (Forkhead-related transcription factor 3) (FREAC-3)
           (Transcription factor FKH-1) (Mesoderm/mesenchyme
           forkhead 1) (MF-1)
          Length = 553

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -3

Query: 376 HAPQPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAARVSE 257
           H  +P PP+    PA A  PP +   + P PQ P  R+ +
Sbjct: 190 HLQEPPPPQAGRQPAPA--PPEQAEGSAPGPQPPPVRIQD 227

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>CSKI1_MOUSE (Q6P9K8) Caskin-1 (CASK-interacting protein 1)|
          Length = 1431

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
 Frame = -3

Query: 424  APAPLQSFLSLHLTWKHAPQPTPPRYRAVPAA----ASRPPLKEAAAV--PYPQEPAARV 263
            AP P ++   L  +    P P P   R  PAA    AS PP + A+ V  P P  PA  V
Sbjct: 1282 APKPAKALAGLQSS-SATPSPVPSPARQPPAALIKPASSPPSQSASPVKPPSPGTPALHV 1340

Query: 262  SEEV*KAA 239
              +  +AA
Sbjct: 1341 PAKPPRAA 1348

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>BRD4_MOUSE (Q9ESU6) Bromodomain-containing protein 4 (Mitotic|
           chromosome-associated protein) (MCAP)
          Length = 1400

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = -3

Query: 421 PAPLQSFLSLHLTWKHAPQPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAA 269
           P P +     HL  +HA    P  + A+P   SRP  + AA  P P  P A
Sbjct: 842 PQPPEHSTPPHLN-QHAVVSPPALHNALPQQPSRPSNRAAALPPKPTRPPA 891

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>BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 protein)|
          Length = 1362

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = -3

Query: 421 PAPLQSFLSLHLTWKHAPQPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAA 269
           P P +     HL  +HA    P  + A+P   SRP  + AA  P P  P A
Sbjct: 840 PQPPEHSTPPHLN-QHAVVSPPALHNALPQQPSRPSNRAAALPPKPARPPA 889

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>PCLO_MOUSE (Q9QYX7) Protein piccolo (Aczonin) (Multidomain presynaptic|
           cytomatrix protein) (Brain-derived HLMN protein)
          Length = 5038

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -3

Query: 373 APQPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAARVS 260
           +PQPTP      PA AS+ P+    A P  + P+ + S
Sbjct: 569 SPQPTPKAASVQPATASKSPVPSQQASPKKELPSKQDS 606

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>TF65_CHICK (P98152) Transcription factor p65 (Nuclear factor NF-kappa-B p65|
           subunit)
          Length = 558

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 17/36 (47%), Positives = 20/36 (55%)
 Frame = -3

Query: 370 PQPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAARV 263
           P+P PPR  AVP   SRPP       P PQ+P + V
Sbjct: 330 PEPRPPRRIAVP---SRPP-------PAPQQPPSMV 355

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>GBX2_CHICK (O42230) Homeobox protein GBX-2 (Gastrulation and brain-specific|
           homeobox protein 2)
          Length = 340

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = -3

Query: 376 HAPQPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAA 269
           + P   PP   A+P AA +PPL  A   P P  P A
Sbjct: 50  YRPVVLPPPPPALPQAALQPPLPPAPPPPLPALPGA 85

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>IE63_HHV11 (P10238) Transcriptional regulator IE63 (VMW63) (ICP27)|
          Length = 512

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
 Frame = -3

Query: 382 WKHAPQPTPP---RYRAVPAAASRPPLKEAAAVPYPQEPAARVSEEV*KAA 239
           W+ + QP PP   R R V  A   PPL   A  P P +P A   E    AA
Sbjct: 194 WRGSEQPDPPGGQRTRGVRQAP--PPLMTLAIAPPPADPRAPAPERKAPAA 242

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>Y5541_ARATH (Q9FKP8) ZF-HD homeobox protein At5g65410|
          Length = 279

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
 Frame = -3

Query: 391 HLTWKHAPQPTPPRYRAVPAAAS-RPPLKEA----AAVPYPQ 281
           H   +H P P PP +  +PA  S RPP  +A     A+P PQ
Sbjct: 130 HAPPQHQPPPPPPGFYRLPAPVSYRPPPSQAPPLQLALPPPQ 171

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>MUTL_ECOL6 (Q8FAK9) DNA mismatch repair protein mutL|
          Length = 615

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 19/60 (31%), Positives = 29/60 (48%)
 Frame = -3

Query: 367 QPTPPRYRAVPAAASRPPLKEAAAVPYPQEPAARVSEEV*KAALEWRAQRSQAEASDGRE 188
           +P  PRY   PA+ SRP    AA+ P  Q    +   EV +  L+  A   + +A + +E
Sbjct: 370 EPVAPRYSPAPASGSRP----AASWPNAQPGYQKQQGEVYRQLLQTPAPMQKPKAPEPQE 425

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>MPAO1_ORYSA (Q40638) Major pollen allergen Ory s 1 precursor (Ory s I)|
          Length = 263

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 363 GCGACFQVRCKDKKLCS 413
           GCG+CF+++C   + CS
Sbjct: 91  GCGSCFEIKCSKPEACS 107

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>MPAL1_LOLPR (P14946) Pollen allergen Lol p 1 precursor (Lol p I) (Allergen R7)|
          Length = 263

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
 Frame = +3

Query: 276 GSCGYGTA-AASFNXXXXXXXXXXXXXXXVGCGACFQVRCKDKKLCS 413
           G+CGY     A FN                GCG+CF+++C   + CS
Sbjct: 62  GACGYKNVDKAPFNGMTGCGNTPIFKDGR-GCGSCFEIKCTKPESCS 107

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>TMPB_TREPH (P29720) Treponemal membrane protein B precursor (Antigen tmpB)|
          Length = 384

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = -3

Query: 346 RAVPAAASRPPLKEAAAVPYPQEPAARVS--EEV*KAALEWRAQRSQAE 206
           +A   AA+R   +EAAA    +E AAR++  EE  + A E  A R  AE
Sbjct: 240 KAAEEAAARKAAEEAAARKAAEEEAARIAAEEEAARKAAEEEAARKAAE 288


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,731,236
Number of Sequences: 219361
Number of extensions: 530848
Number of successful extensions: 3559
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 2933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3487
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4528412720
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result